Carg24970 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24970
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Pentatricopeptide repeat-containing protein
Location	Carg_Chr04: 12514146 .. 12518765 (-)
RNA-Seq Expression	Carg24970
Synteny	Carg24970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTAAGAAGAGAGCTGCAATTCTTGCTAGACGCTCCTTAATAGCACTATGCAACATACGATCTTCATGTAGCTCCTCAGTATCAAACAAAGTCCTAAATCAAGTTAGAAATTTAAGCATTGCTTCTGAAAGAGAGGAATATCAGAACGATAATGGATATCATGCAGATAACTCTTTGCAGAGTTACCAAAGCCATGGTGGATTTAGAAGTGACAGCCAAAGCCCTGGGTACTATCAGCATCATGCCCAAAGTGCCAGTTTCCAAAGCTCTTCTTGGCCTAATCAGAATATTCTACTTGAGCGTAGAGAAAATTTAACTGCTTACAATGGGTTTAACAATGGAGAACTGCAGCAGAACAATTACGAGGTTTCTGGACAGAATTCATGGGGCACACAGATTGAATCCAGACAATTTGTACATGGCAACAGCCTAAATTACCACAATTCTATGCCAGGACTAAACAACCATATTCCCATCTCAAGACAATATGAGCAAAACTCCATGTCTCAGCCACATCCACAGGGGCAATATCAACAAGGTGGCAGTGTTGAACTATATCAGCCAAACCCAGATACTATTCAGAGTCACACGATTGGTACTCAAGTATTAAACAACACCAATTCTGATGAGGAAATTGGCGTGACTAAGGATAACCCATATGGTGGTACCCTTGAGGAGCTTGATGAATTCTGCAGGGAAGGAAAATTGAAGGAGGCTGTGCAAATTCTGGAAATGTTTGAGAAACAAAACATTCCTGTTGATTTATCCCGGTATTTAAATTTGATGAATGCATGTGGGGAAGCAAGGTCCCTAGAAGAAGCCAAAGTGGTTTGTAATTACGTAATAAAATCTCAAACCCCTCTCAAAGTTAGCACCTATAACAAAATTCTGGAGATGTACTCTAAATGTGGTTCCATGGATGATGCCTATATGATATTCAACAAAATGCCCAGCCGCAACCTAACATCTTGGGATACTATGATTACATGGCTTGCCAAGAATGGCCTAGGGGAAGATGCTATTGACCTTTTCTACGAGTTAAAAAAAACTGGGTTGAGAATTGATGGAAAAATGTTCATTGGAGTTTTCTCAGCATGTAGTGTCTTGGGAGATGTTGATGAGGGGATGTTACACTTTGAATCAATGACAAAGAATTATGGCATCATTCCTTCTATGCAACATTATGTTAGTATAATAGACATGCTTGGTAGTGTAGGTTATGTAGATGAAGCTTTGGAGTTCATTGAAAAGATGCCATTTGAGCCAGGGGTAGATATTTGGGAAACAATGATGAATATCTCTAGAGCTCATGGGTTGATGGAGCTTGGTGATCGTTGTTTTGAGCTTGTTGAGCAGCTTGATCCCTCTCGCTTAAATGAGCAGTCAAAAGCTGGCCATCTGCCTATAAAAGCTTCAGACCTCGCAAAAGAGAGAGAGAAGAAAAAATTAGCCAACCGGAACCTTTTAGAAGTCAGGAGCCGAGTACATGAATATCGAGCTGGAGATACTTCTCACCCTGAGAATGACAGGATCTATACCTTGCTTAGGGGTTTGAGAGAACAAATGAAGGAGGCTGGTTATATTCCAGAGACTCGATTTGTACTCCATGATATAGATCAGGAAGGCAAAAATGATGCTCTACTTGGTCATAGTGAGAGACTTGCTGTTGCATATGGTCTAATCAGCAGCTCAGCCCGTTCACCCATAAGAGTAATTAAGAACCTTCGAGTTTGTGGTGATTGCCATAGTGCACTAAAGATAATCTCAAAAATTGTGGGTCGAGAACTCATCATCCGTGATGCTAAGAGATTTCACCATTTTAAAGATGGATTATGCTCTTGCCGTGATTACTGGTGAAGAAAACGAAACTTGAGGTATGTCTAAAATTTTGTCTCCACTTGTTTTCTTTTAATATCTAAGCTTTTGTCAGGTTTGGACATGTTCATAAATTGCTATAATTTATATTCCTCATTCCCATTAAAAATTGAATTACAAATTAGGTTGGCGCTGAATTATATGTTTTATCTTGTGATGTTATGAAAATTTCTCCTTATATTCCTGGTCTTTGTTTTTGTTCTTTTATTTTAATTCGTGGTCTTCGTTCTCATTTCATTGTTGCATTTGCATCTTGTTCAAAGTTTGGTTAGACATCGAAATTATCTTATTCATTGAAACCTATTTTTTTTTATTTATTGAAATCCATGTTTAGAGTTTGGCTAGAGGTTGAATTACCTCTTGCTCGATGTACTCTAAATTTCTGAATAGAAGTAGCACGGACTATCTGTCATTACCTAAAAAGGGGAGAAATTTTGTGATCACCTCCTAGTTGAAACCGTATGTGTACTTGATCGTAGTGTCAAGTAATAAGTGGCATTCTCAGTGCAATATTCTAAATGGTAACGTGTTGTCATCCACTCATTTTCAATTTATTGAGACTGATAATGCCTCCTCGAGGTGTACTGATTGGTAATGATGTCTTGTCTAAAGTGACATACCTAAAAAAAAGAAAAAAAAAAAAAAAAAGGAAAAAGGAAAAAAAAAGAAAACGGAAATCAAGTTGAGTAATATATGATTTTGGTACTTTGTATAGGATCCTGGATTTTGCAAAAGTAAGAACTTTCTATTGTAAGGTAATAAACGGTCCATATTCCTTTATGGTGGATTTATGCTTTTAAAAGGCTTCATCACGGTGACCCATTAGCTCCATTTCTATTTTTGCTAGTTGGAGAAGTTCTAAGCGGACGCATGGATAAAGGTATGTCTATGACGGTTTTAAAGGCTTTTTTGTTGGCAAAGATGGGATTCTTACAAGAAATAATTTTTCATCGATGAAATGAAAAATCACAGAGAAATATGGAAAATTTTTAACAGAAGAAATGACAACTAAGGCTATCGGATCATCTTACAACACTGACCAAAACAAACTATACTAACTCTTGATCAAATAGAAAAACTTAACAAAAAACAAAAACTAGGAAAGCACACTATGATGTCAACAACTGTAAGTTTCAAACTCTCAAACCACCAGCAGCAGCTTTCTTTCGAGCTCCCTCATTAGTCAAAACAAACTGCCGACAGCAAAAACTCTTCCTTCCAAAACAATGGATCAGACATTGCAACTTGAGCACCATCTACTTGTGGAACCAACAACAAATAGAGAAAACCGTACTTGAAGAACTCTCAAGAATTTGTAAAACTCAAATGGAAGACAATAACTTAAATGATCTTTTGCCTCGTAAACTTTGAAACAATTTTGAGACCTTTTCAGGCTTCAAGGTAAATCAAACAAATTCATGGTGAGCAATATCAACCTAAGCAACATAAGATAACATGGTTCATAAAGTGCGTGAATTTTGAACCTCTACCATCGGGGGGGTAATTTTGAAAAGAAAGATGTGTTGATAGATGAAGGATTTTGGTTTGTCTAGGGGAGGGATGGTGCTTTGTAATGTCATTCTTACAAATTTCATAATGTTCTGGCTTTGGCTTAATGAATCCTTACTCTTCTAATATTCTGTCATTTGCAAACAATACCAATAGAGAGTTCTCTTCATTAGGGAATGTCATGGATTATCTCTTCTTTGTTGCCTAGGTAAGGAGAAAATGTGTGTGAGAGAGAGGGGTGAGTAGGAGGGTGGGGATGGAAATGGATGGCATTCCTAGTCGGGGAAGATAAAAGTGGAATCTAAGGATTAAAAGAACTCCTCGATGTAAGATTTATGGGGAAGTAGATTAAATATTAAGCGAAGAAGTAGAGTTGTGACTTCAATTTTTATCCAATTGGTCTCAGCTATTGGACCTATCGTTTAACAATAAAGGTGTTGTGGTTGAATTTTTCCTGATCGGTTCACATGGAGTAAACTTGAGTAACTTCATACTTGAGGCGAGGTGGAACATAAGCAAAAAGCATGACGCTCAAGTGGTTGAAAAGAGAACTATGGGTTTTGTAGGAGACATTGCGTTAATATGCTTGCTTTCTAATCATCAAAATTGTTCATACTGTTCATATTTTTATAAAGTGGCCTCTTAAGTTTCCTAATCATCTCATTGATCTTTGTTTAGATTACATGCTTCCTTGTTCACGAGCTGTTTCAGAAGGTTAGCTTTTTTAGTAGGTATTTCTCATCTTCCCCTCTGGCTATTGTAGAAGCACTATGACAGATAAATGCACAACTCTCATTGCATATGCATCTTCTGCAGCTCCATTACCATGTTCAAAAGGGTGTCGAGGTTCAAAATTAACAGAAAGTTCAAAATTACTATTCCCAGGCAAAGTCACCGAACTCTCACACTTGGTGGAGGCTTAGGCTTGAGAATGTATGGAACAAACCGTTGATGGCTTGTGCCTGGGCTCGGATCAAACCTAAACTATTCTTCCTAAACTGCAGCTATTATTTCTCGACATCTCTTATTTACTTAGTAATGTAATCACCATTATCAATAACCCCAATTTTGATGTAGCAAGATAACTAGTGATAGACAAATTGGAGCCAAGCAGTCGGTCAAACTAAACAAAAGTCGAATTGAACAAATTCTATTTTGTTTTCCCAATGATTTATTGGTTCAATTCTATGTACTATTTTATATTTGGATTGGTTTGATCAAAGTTCTATAGAG

mRNA sequence

ATGTGTAAGAAGAGAGCTGCAATTCTTGCTAGACGCTCCTTAATAGCACTATGCAACATACGATCTTCATGTAGCTCCTCAGTATCAAACAAAGTCCTAAATCAAGTTAGAAATTTAAGCATTGCTTCTGAAAGAGAGGAATATCAGAACGATAATGGATATCATGCAGATAACTCTTTGCAGAGTTACCAAAGCCATGGTGGATTTAGAAGTGACAGCCAAAGCCCTGGGTACTATCAGCATCATGCCCAAAGTGCCAGTTTCCAAAGCTCTTCTTGGCCTAATCAGAATATTCTACTTGAGCGTAGAGAAAATTTAACTGCTTACAATGGGTTTAACAATGGAGAACTGCAGCAGAACAATTACGAGGTTTCTGGACAGAATTCATGGGGCACACAGATTGAATCCAGACAATTTGTACATGGCAACAGCCTAAATTACCACAATTCTATGCCAGGACTAAACAACCATATTCCCATCTCAAGACAATATGAGCAAAACTCCATGTCTCAGCCACATCCACAGGGGCAATATCAACAAGGTGGCAGTGTTGAACTATATCAGCCAAACCCAGATACTATTCAGAGTCACACGATTGGTACTCAAGTATTAAACAACACCAATTCTGATGAGGAAATTGGCGTGACTAAGGATAACCCATATGGTGGTACCCTTGAGGAGCTTGATGAATTCTGCAGGGAAGGAAAATTGAAGGAGGCTGTGCAAATTCTGGAAATGTTTGAGAAACAAAACATTCCTGTTGATTTATCCCGGTATTTAAATTTGATGAATGCATGTGGGGAAGCAAGGTCCCTAGAAGAAGCCAAAGTGGTTTGTAATTACGTAATAAAATCTCAAACCCCTCTCAAAGTTAGCACCTATAACAAAATTCTGGAGATGTACTCTAAATGTGGTTCCATGGATGATGCCTATATGATATTCAACAAAATGCCCAGCCGCAACCTAACATCTTGGGATACTATGATTACATGGCTTGCCAAGAATGGCCTAGGGGAAGATGCTATTGACCTTTTCTACGAGTTAAAAAAAACTGGGTTGAGAATTGATGGAAAAATGTTCATTGGAGTTTTCTCAGCATGTAGTGTCTTGGGAGATGTTGATGAGGGGATGTTACACTTTGAATCAATGACAAAGAATTATGGCATCATTCCTTCTATGCAACATTATGTTAGTATAATAGACATGCTTGGTAGTGTAGGTTATGTAGATGAAGCTTTGGAGTTCATTGAAAAGATGCCATTTGAGCCAGGGGTAGATATTTGGGAAACAATGATGAATATCTCTAGAGCTCATGGGTTGATGGAGCTTGGTGATCGTTGTTTTGAGCTTGTTGAGCAGCTTGATCCCTCTCGCTTAAATGAGCAGTCAAAAGCTGGCCATCTGCCTATAAAAGCTTCAGACCTCGCAAAAGAGAGAGAGAAGAAAAAATTAGCCAACCGGAACCTTTTAGAAGTCAGGAGCCGAGTACATGAATATCGAGCTGGAGATACTTCTCACCCTGAGAATGACAGGATCTATACCTTGCTTAGGGGTTTGAGAGAACAAATGAAGGAGGCTGGTTATATTCCAGAGACTCGATTTGTACTCCATGATATAGATCAGGAAGGCAAAAATGATGCTCTACTTGGTCATAGTGAGAGACTTGCTGTTGCATATGGTCTAATCAGCAGCTCAGCCCGTTCACCCATAAGAGTAATTAAGAACCTTCGAGTTTGTGGTGATTGCCATAGTGCACTAAAGATAATCTCAAAAATTGTGGGTCGAGAACTCATCATCCGTGATGCTAAGAGATTTCACCATTTTAAAGATGGATTATGCTCTTGCCATTACATGCTTCCTTGTTCACGAGCTGTTTCAGAAGGTTAGCTTTTTTAGTAGGTATTTCTCATCTTCCCCTCTGGCTATTGTAGAAGCACTATGACAGATAAATGCACAACTCTCATTGCATATGCATCTTCTGCAGCTCCATTACCATGTTCAAAAGGGTGTCGAGGTTCAAAATTAACAGAAAGTTCAAAATTACTATTCCCAGGCAAAGTCACCGAACTCTCACACTTGGTGGAGGCTTAGGCTTGAGAATGTATGGAACAAACCGTTGATGGCTTGTGCCTGGGCTCGGATCAAACCTAAACTATTCTTCCTAAACTGCAGCTATTATTTCTCGACATCTCTTATTTACTTAGTAATGTAATCACCATTATCAATAACCCCAATTTTGATGTAGCAAGATAACTAGTGATAGACAAATTGGAGCCAAGCAGTCGGTCAAACTAAACAAAAGTCGAATTGAACAAATTCTATTTTGTTTTCCCAATGATTTATTGGTTCAATTCTATGTACTATTTTATATTTGGATTGGTTTGATCAAAGTTCTATAGAG

Coding sequence (CDS)

ATGTGTAAGAAGAGAGCTGCAATTCTTGCTAGACGCTCCTTAATAGCACTATGCAACATACGATCTTCATGTAGCTCCTCAGTATCAAACAAAGTCCTAAATCAAGTTAGAAATTTAAGCATTGCTTCTGAAAGAGAGGAATATCAGAACGATAATGGATATCATGCAGATAACTCTTTGCAGAGTTACCAAAGCCATGGTGGATTTAGAAGTGACAGCCAAAGCCCTGGGTACTATCAGCATCATGCCCAAAGTGCCAGTTTCCAAAGCTCTTCTTGGCCTAATCAGAATATTCTACTTGAGCGTAGAGAAAATTTAACTGCTTACAATGGGTTTAACAATGGAGAACTGCAGCAGAACAATTACGAGGTTTCTGGACAGAATTCATGGGGCACACAGATTGAATCCAGACAATTTGTACATGGCAACAGCCTAAATTACCACAATTCTATGCCAGGACTAAACAACCATATTCCCATCTCAAGACAATATGAGCAAAACTCCATGTCTCAGCCACATCCACAGGGGCAATATCAACAAGGTGGCAGTGTTGAACTATATCAGCCAAACCCAGATACTATTCAGAGTCACACGATTGGTACTCAAGTATTAAACAACACCAATTCTGATGAGGAAATTGGCGTGACTAAGGATAACCCATATGGTGGTACCCTTGAGGAGCTTGATGAATTCTGCAGGGAAGGAAAATTGAAGGAGGCTGTGCAAATTCTGGAAATGTTTGAGAAACAAAACATTCCTGTTGATTTATCCCGGTATTTAAATTTGATGAATGCATGTGGGGAAGCAAGGTCCCTAGAAGAAGCCAAAGTGGTTTGTAATTACGTAATAAAATCTCAAACCCCTCTCAAAGTTAGCACCTATAACAAAATTCTGGAGATGTACTCTAAATGTGGTTCCATGGATGATGCCTATATGATATTCAACAAAATGCCCAGCCGCAACCTAACATCTTGGGATACTATGATTACATGGCTTGCCAAGAATGGCCTAGGGGAAGATGCTATTGACCTTTTCTACGAGTTAAAAAAAACTGGGTTGAGAATTGATGGAAAAATGTTCATTGGAGTTTTCTCAGCATGTAGTGTCTTGGGAGATGTTGATGAGGGGATGTTACACTTTGAATCAATGACAAAGAATTATGGCATCATTCCTTCTATGCAACATTATGTTAGTATAATAGACATGCTTGGTAGTGTAGGTTATGTAGATGAAGCTTTGGAGTTCATTGAAAAGATGCCATTTGAGCCAGGGGTAGATATTTGGGAAACAATGATGAATATCTCTAGAGCTCATGGGTTGATGGAGCTTGGTGATCGTTGTTTTGAGCTTGTTGAGCAGCTTGATCCCTCTCGCTTAAATGAGCAGTCAAAAGCTGGCCATCTGCCTATAAAAGCTTCAGACCTCGCAAAAGAGAGAGAGAAGAAAAAATTAGCCAACCGGAACCTTTTAGAAGTCAGGAGCCGAGTACATGAATATCGAGCTGGAGATACTTCTCACCCTGAGAATGACAGGATCTATACCTTGCTTAGGGGTTTGAGAGAACAAATGAAGGAGGCTGGTTATATTCCAGAGACTCGATTTGTACTCCATGATATAGATCAGGAAGGCAAAAATGATGCTCTACTTGGTCATAGTGAGAGACTTGCTGTTGCATATGGTCTAATCAGCAGCTCAGCCCGTTCACCCATAAGAGTAATTAAGAACCTTCGAGTTTGTGGTGATTGCCATAGTGCACTAAAGATAATCTCAAAAATTGTGGGTCGAGAACTCATCATCCGTGATGCTAAGAGATTTCACCATTTTAAAGATGGATTATGCTCTTGCCATTACATGCTTCCTTGTTCACGAGCTGTTTCAGAAGGTTAG

Protein sequence

MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSLQSYQSHGGFRSDSQSPGYYQHHAQSASFQSSSWPNQNILLERRENLTAYNGFNNGELQQNNYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMSQPHPQGQYQQGGSVELYQPNPDTIQSHTIGTQVLNNTNSDEEIGVTKDNPYGGTLEELDEFCREGKLKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKKTGLRIDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMPFEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDIDQEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCHYMLPCSRAVSEG

Homology

[Close]

BLAST of Carg24970 vs. NCBI nr
Match: KAG7032452.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1253.0 bits (3241), Expect = 0.0e+00
Identity = 628/628 (100.00%), Postives = 628/628 (100.00%), Query Frame = 0


Query: 1   MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSL 60
           MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSL
Sbjct: 1   MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSL 60

Query: 61  QSYQSHGGFRSDSQSPGYYQHHAQSASFQSSSWPNQNILLERRENLTAYNGFNNGELQQN 120
           QSYQSHGGFRSDSQSPGYYQHHAQSASFQSSSWPNQNILLERRENLTAYNGFNNGELQQN
Sbjct: 61  QSYQSHGGFRSDSQSPGYYQHHAQSASFQSSSWPNQNILLERRENLTAYNGFNNGELQQN 120

Query: 121 NYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMSQPHPQGQYQQ 180
           NYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMSQPHPQGQYQQ
Sbjct: 121 NYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMSQPHPQGQYQQ 180

Query: 181 GGSVELYQPNPDTIQSHTIGTQVLNNTNSDEEIGVTKDNPYGGTLEELDEFCREGKLKEA 240
           GGSVELYQPNPDTIQSHTIGTQVLNNTNSDEEIGVTKDNPYGGTLEELDEFCREGKLKEA
Sbjct: 181 GGSVELYQPNPDTIQSHTIGTQVLNNTNSDEEIGVTKDNPYGGTLEELDEFCREGKLKEA 240

Query: 241 VQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEM 300
           VQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEM
Sbjct: 241 VQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEM 300

Query: 301 YSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKKTGLRIDGKMF 360
           YSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKKTGLRIDGKMF
Sbjct: 301 YSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKKTGLRIDGKMF 360

Query: 361 IGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMP 420
           IGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMP
Sbjct: 361 IGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMP 420

Query: 421 FEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKERE 480
           FEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKERE
Sbjct: 421 FEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKERE 480

Query: 481 KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID 540
           KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID
Sbjct: 481 KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID 540

Query: 541 QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR 600
           QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR
Sbjct: 541 QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR 600

Query: 601 DAKRFHHFKDGLCSCHYMLPCSRAVSEG 629
           DAKRFHHFKDGLCSCHYMLPCSRAVSEG
Sbjct: 601 DAKRFHHFKDGLCSCHYMLPCSRAVSEG 628

[Close]

BLAST of Carg24970 vs. NCBI nr
Match: XP_022929973.1 (pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Cucurbita moschata] >XP_022929974.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Cucurbita moschata] >XP_022929976.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Cucurbita moschata] >XP_022929977.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 1206.4 bits (3120), Expect = 0.0e+00
Identity = 607/615 (98.70%), Postives = 608/615 (98.86%), Query Frame = 0


Query: 1   MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSL 60
           MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSL
Sbjct: 1   MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSL 60

Query: 61  QSYQSHGGFRSDSQSPGYYQHHAQSASFQSSSWPNQNILLERRENLTAYNGFNNGELQQN 120
           QSYQSHGGF SDSQSPGYYQHHAQSASFQSSSWPNQNILLERRENLTAYNGFNNGELQQN
Sbjct: 61  QSYQSHGGFSSDSQSPGYYQHHAQSASFQSSSWPNQNILLERRENLTAYNGFNNGELQQN 120

Query: 121 NYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMSQPHPQGQYQQ 180
           NYEVSGQNSWGTQIESRQFVHGNSLNY NSMPGLNNHIPISRQYEQNSMSQPHPQGQYQQ
Sbjct: 121 NYEVSGQNSWGTQIESRQFVHGNSLNYRNSMPGLNNHIPISRQYEQNSMSQPHPQGQYQQ 180

Query: 181 GGSVELYQPNPDTIQSHTIGTQVLNNTNSDEEIGVTKDNPYGGTLEELDEFCREGKLKEA 240
           GGSVELYQPNPDTIQS TIGTQVLNNTN+DEEIGVTKDNPYGGTLEELDEFCREGKLKEA
Sbjct: 181 GGSVELYQPNPDTIQSRTIGTQVLNNTNADEEIGVTKDNPYGGTLEELDEFCREGKLKEA 240

Query: 241 VQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEM 300
           VQILEM EKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEM
Sbjct: 241 VQILEMLEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEM 300

Query: 301 YSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKKTGLRIDGKMF 360
           YSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYE KKTGLRIDGKMF
Sbjct: 301 YSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYEFKKTGLRIDGKMF 360

Query: 361 IGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMP 420
           IGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMP
Sbjct: 361 IGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMP 420

Query: 421 FEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKERE 480
           FEPGVDIWE MMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKA DLAKERE
Sbjct: 421 FEPGVDIWEAMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKALDLAKERE 480

Query: 481 KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID 540
           KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID
Sbjct: 481 KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID 540

Query: 541 QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR 600
           QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR
Sbjct: 541 QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR 600

Query: 601 DAKRFHHFKDGLCSC 616
           DAKRFHHFKDGLCSC
Sbjct: 601 DAKRFHHFKDGLCSC 615

[Close]

BLAST of Carg24970 vs. NCBI nr
Match: XP_023530381.1 (pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023530394.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023530402.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023530411.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023530418.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023530427.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1204.9 bits (3116), Expect = 0.0e+00
Identity = 606/615 (98.54%), Postives = 607/615 (98.70%), Query Frame = 0


Query: 1   MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSL 60
           MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSL
Sbjct: 1   MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSL 60

Query: 61  QSYQSHGGFRSDSQSPGYYQHHAQSASFQSSSWPNQNILLERRENLTAYNGFNNGELQQN 120
           QSYQSH GF SDSQSPGYYQHHAQSASFQ SSWPNQNILLERRENLTAYNGFNNGELQQN
Sbjct: 61  QSYQSHSGFSSDSQSPGYYQHHAQSASFQISSWPNQNILLERRENLTAYNGFNNGELQQN 120

Query: 121 NYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMSQPHPQGQYQQ 180
           NYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMSQPHPQGQYQQ
Sbjct: 121 NYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMSQPHPQGQYQQ 180

Query: 181 GGSVELYQPNPDTIQSHTIGTQVLNNTNSDEEIGVTKDNPYGGTLEELDEFCREGKLKEA 240
           GGSVELYQPNPDTIQS TIGTQVL NTN+DEEIGVTKDNPYGGTLEELDEFCREGKLKEA
Sbjct: 181 GGSVELYQPNPDTIQSRTIGTQVLKNTNADEEIGVTKDNPYGGTLEELDEFCREGKLKEA 240

Query: 241 VQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEM 300
           VQILEM EKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEM
Sbjct: 241 VQILEMLEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEM 300

Query: 301 YSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKKTGLRIDGKMF 360
           YSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYE KKTGLRIDGKMF
Sbjct: 301 YSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYEFKKTGLRIDGKMF 360

Query: 361 IGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMP 420
           IGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMP
Sbjct: 361 IGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMP 420

Query: 421 FEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKERE 480
           FEPGVDIWE MMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKERE
Sbjct: 421 FEPGVDIWEAMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKERE 480

Query: 481 KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID 540
           KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID
Sbjct: 481 KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID 540

Query: 541 QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR 600
           QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR
Sbjct: 541 QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR 600

Query: 601 DAKRFHHFKDGLCSC 616
           DAKRFHHFKDGLCSC
Sbjct: 601 DAKRFHHFKDGLCSC 615

[Close]

BLAST of Carg24970 vs. NCBI nr
Match: XP_022994138.1 (pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita maxima] >XP_022994146.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita maxima] >XP_022994152.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita maxima] >XP_022994161.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita maxima])

HSP 1 Score: 1195.6 bits (3092), Expect = 0.0e+00
Identity = 599/615 (97.40%), Postives = 604/615 (98.21%), Query Frame = 0


Query: 1   MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSL 60
           MCKKRAAILARRSLIALCN RSSCSSSVSNK LNQVRNLSIASEREEYQNDNGYHADNSL
Sbjct: 1   MCKKRAAILARRSLIALCNARSSCSSSVSNKALNQVRNLSIASEREEYQNDNGYHADNSL 60

Query: 61  QSYQSHGGFRSDSQSPGYYQHHAQSASFQSSSWPNQNILLERRENLTAYNGFNNGELQQN 120
           QSYQSHGGF SDSQSPGYYQHHAQ ASFQSSSWPNQNILLERRENLTAYNGFNNGELQQN
Sbjct: 61  QSYQSHGGFSSDSQSPGYYQHHAQRASFQSSSWPNQNILLERRENLTAYNGFNNGELQQN 120

Query: 121 NYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMSQPHPQGQYQQ 180
           NYEVSGQNSWGTQ+ESRQFVHGNSLNYHNSMPGLNNHIP+SRQYEQNSMSQPHPQGQYQQ
Sbjct: 121 NYEVSGQNSWGTQMESRQFVHGNSLNYHNSMPGLNNHIPVSRQYEQNSMSQPHPQGQYQQ 180

Query: 181 GGSVELYQPNPDTIQSHTIGTQVLNNTNSDEEIGVTKDNPYGGTLEELDEFCREGKLKEA 240
           GGSVELYQPNPDTIQS TIGTQVLNNTN+DEEIGVTKDNPYGGTLEELDEFCREGKLKEA
Sbjct: 181 GGSVELYQPNPDTIQSRTIGTQVLNNTNADEEIGVTKDNPYGGTLEELDEFCREGKLKEA 240

Query: 241 VQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEM 300
           VQILEM EKQNIPVDLSRYLNLMNACGEARSLEEAKVVC YVIKSQTPLKVSTYNKILEM
Sbjct: 241 VQILEMLEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCKYVIKSQTPLKVSTYNKILEM 300

Query: 301 YSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKKTGLRIDGKMF 360
           YSKCGSM+DAY+IFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYE KKTGLRIDGKMF
Sbjct: 301 YSKCGSMNDAYLIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYEFKKTGLRIDGKMF 360

Query: 361 IGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMP 420
           IGVFSACSVLGDVDEGMLHFESMTKNYGI PSM HYVSIIDMLGSVGYVDEALEFIE MP
Sbjct: 361 IGVFSACSVLGDVDEGMLHFESMTKNYGITPSMHHYVSIIDMLGSVGYVDEALEFIENMP 420

Query: 421 FEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKERE 480
           FEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKERE
Sbjct: 421 FEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKERE 480

Query: 481 KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID 540
           KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID
Sbjct: 481 KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID 540

Query: 541 QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR 600
           QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR
Sbjct: 541 QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR 600

Query: 601 DAKRFHHFKDGLCSC 616
           DAKRFHHFKDGLCSC
Sbjct: 601 DAKRFHHFKDGLCSC 615

[Close]

BLAST of Carg24970 vs. NCBI nr
Match: XP_038876765.1 (pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Benincasa hispida] >XP_038876766.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 1010.4 bits (2611), Expect = 6.9e-291
Identity = 537/741 (72.47%), Postives = 567/741 (76.52%), Query Frame = 0


Query: 1   MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSL 60
           MCKKRAAI+ARRSL+ALC   SSCSSS SNKVLN VRNLS+ASEREE QNDNGYHAD SL
Sbjct: 1   MCKKRAAIIARRSLVALCTAGSSCSSSASNKVLNLVRNLSVASEREECQNDNGYHADTSL 60

Query: 61  QSYQSHGGFRSDSQSPGYYQHHAQSASFQS------------------------------ 120
           QSYQ+HGGF SD+Q+ GYYQH++QSAS QS                              
Sbjct: 61  QSYQTHGGFSSDNQNSGYYQHYSQSASLQSRPYEDNIDSFDAENSMQGQHKLSTSSVYGQ 120

Query: 121 ---SSWPN---------------------------------------------------- 180
              SS+ N                                                    
Sbjct: 121 RPGSSFANTSPMHETASRSYGQNYGGMPPNSYGFNQNHDEAYRETYQNTHHANPVSLNGN 180

Query: 181 -----------------------------------------QNILLERRENLTAYNGFNN 240
                                                    QNI LERRE  +AYNG+NN
Sbjct: 181 FVENGYNGVVAQDHNSYNGNNRRNFVHISNNELCGVDRSMSQNIQLERREIFSAYNGYNN 240

Query: 241 GELQQNNYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMSQPHP 300
            ELQQNNY VSGQNSWGT  ES+Q+VHG  LNYHN + GLNNHIP+SR YEQNS+SQ HP
Sbjct: 241 EELQQNNYGVSGQNSWGTWTESKQYVHGTGLNYHNPISGLNNHIPLSRHYEQNSISQQHP 300

Query: 301 QGQYQQGGSVELYQPNPDTIQSHTIGTQVLNNTNSDEEIGVTKDNPYGGTLEELDEFCRE 360
           QGQYQQG SVE Y+PNPDT QS+ IGTQV+NN N + EIG+ KD P+G TLEELDEFCRE
Sbjct: 301 QGQYQQGASVEQYKPNPDTNQSNMIGTQVVNNANGEGEIGMAKDRPHGATLEELDEFCRE 360

Query: 361 GKLKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTY 420
           GKLKEAVQILE+ EKQ+IP++LSRYL+LMNACGEARSLEEAKVVCNYVIKSQTPLKVSTY
Sbjct: 361 GKLKEAVQILEVLEKQHIPINLSRYLDLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTY 420

Query: 421 NKILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKKTGLR 480
           NKILEMYSKCGSMDDAY IFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYE KK GLR
Sbjct: 421 NKILEMYSKCGSMDDAYTIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYEFKKAGLR 480

Query: 481 IDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALE 540
            DGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGI PSM HYVSI+DMLGS+GYVDEALE
Sbjct: 481 PDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIGYVDEALE 540

Query: 541 FIEKMPFEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASD 600
           FIEKMP EPGVDIWETMMNISRAHGLM+LGDRC ELVE LD SRLNEQSKAG LPIKASD
Sbjct: 541 FIEKMPLEPGVDIWETMMNISRAHGLMDLGDRCCELVEHLDSSRLNEQSKAGLLPIKASD 600

Query: 601 LAKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRF 616
           L KEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRF
Sbjct: 601 LEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRF 660

[Close]

BLAST of Carg24970 vs. ExPASy Swiss-Prot
Match: Q680H3 (Pentatricopeptide repeat-containing protein At2g25580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H75 PE=2 SV=2)

HSP 1 Score: 436.8 bits (1122), Expect = 4.1e-121
Identity = 211/391 (53.96%), Postives = 282/391 (72.12%), Query Frame = 0


Query: 225 LEELDEFCREGKLKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIK 284
           +EE D FC+ GK+K+A+  +++    N  VDLSR L L   CGEA  L+EAK V   +  
Sbjct: 223 IEEYDAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISA 282

Query: 285 SQTPLKVSTYNKILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDL 344
           S + L +S+ + +LEMYS CG  ++A  +F KM  +NL +W  +I   AKNG GEDAID+
Sbjct: 283 SVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDM 342

Query: 345 FYELKKTGLRIDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLG 404
           F   K+ G   DG++F G+F AC +LGDVDEG+LHFESM+++YGI PS++ YVS+++M  
Sbjct: 343 FSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYA 402

Query: 405 SVGYVDEALEFIEKMPFEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSK 464
             G++DEALEF+E+MP EP VD+WET+MN+SR HG +ELGD C E+VE LDP+RLN+QS+
Sbjct: 403 LPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSR 462

Query: 465 AGHLPIKASDLAKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMK 524
            G +P+KASD+ KE  KK+  +  L  V+S + E+RAGDT+ PEND ++ LLR L+  M 
Sbjct: 463 EGFIPVKASDVEKESLKKR--SGILHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMV 522

Query: 525 EAGYIPETRFVLHDIDQEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHS 584
           E GY+ ETR  LHDIDQE K   LLGHSER+A A  +++S+ R P  VIKNLRVC DCH+
Sbjct: 523 EVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHN 582

Query: 585 ALKIISKIVGRELIIRDAKRFHHFKDGLCSC 616
           ALKI+S IVGRE+I RD KRFH  K+G C+C
Sbjct: 583 ALKIMSDIVGREVITRDIKRFHQMKNGACTC 611

[Close]

BLAST of Carg24970 vs. ExPASy Swiss-Prot
Match: Q9SUU7 (Pentatricopeptide repeat-containing protein At4g32450, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H63 PE=2 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 4.6e-120
Identity = 230/477 (48.22%), Postives = 310/477 (64.99%), Query Frame = 0


Query: 164 YEQ--NSMSQPHPQGQYQQGGSVELYQPNPDTIQSHTIGTQVLNNTNSDEEI-------- 223
           YEQ  N +S  +P  ++ Q G    Y  N    QS+   ++++N  N + +         
Sbjct: 72  YEQSLNPVSGQNPTNRFYQNG----YNRN----QSYGEHSEIINQRNQNWQSSDGCSSYG 131

Query: 224 ----GVTKDNPYGG-----------TLEELDEFCREGKLKEAVQILEMFEKQNIPVDLSR 283
               GV ++N  GG           +L+ELD  CREGK+K+AV+I++ +  +   VDL R
Sbjct: 132 TTGNGVPQENNTGGNHFQQDHSGHSSLDELDSICREGKVKKAVEIIKSWRNEGYVVDLPR 191

Query: 284 YLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEMYSKCGSMDDAYMIFNKMP 343
              +   CG+A++L+EAKVV  ++  S     +S YN I+EMYS CGS++DA  +FN MP
Sbjct: 192 LFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMP 251

Query: 344 SRNLTSWDTMITWLAKNGLGEDAIDLFYELKKTGLRIDGKMFIGVFSACSVLGDVDEGML 403
            RNL +W  +I   AKNG GEDAID F   K+ G + DG+MF  +F AC VLGD++EG+L
Sbjct: 252 ERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLL 311

Query: 404 HFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMPFEPGVDIWETMMNISRAH 463
           HFESM K YGIIP M+HYVS++ ML   GY+DEAL F+E M  EP VD+WET+MN+SR H
Sbjct: 312 HFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVH 371

Query: 464 GLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKEREKKKLANRNLLEVRSRVHE 523
           G + LGDRC ++VEQLD SRLN++SKAG +P+K+SDL KE+ ++     N       +  
Sbjct: 372 GDLILGDRCQDMVEQLDASRLNKESKAGLVPVKSSDLVKEKLQRMAKGPNY-----GIRY 431

Query: 524 YRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDIDQEGKNDALLGHSERLAVA 583
             AGD S PEN  +Y  L+ L+E M E GY+P ++  LHD+DQE K++ L  H+ER A  
Sbjct: 432 MAAGDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFI 491

Query: 584 YGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSC 616
              + + ARS IRV+KNLRVC DCH+ALK++SKIVGRELI RDAKRFHH KDG+CSC
Sbjct: 492 STFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSC 533

[Close]

BLAST of Carg24970 vs. ExPASy Swiss-Prot
Match: Q8S8Q7 (Pentatricopeptide repeat-containing protein At2g34370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H25 PE=2 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.0e-95
Identity = 175/399 (43.86%), Postives = 266/399 (66.67%), Query Frame = 0


Query: 218 DNPYGGTLEELDEFCREGKLKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKV 277
           +N    T+E  D  C++ K++EA++++++ E +   VD  R L L   CGE  +LEEA+V
Sbjct: 74  NNHQSVTIETFDALCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARV 133

Query: 278 VCNYVIKSQTPLKVSTYNKILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGL 337
           V + +    TPL   +Y+ ++EMYS C S DDA  +FN+MP RN  +W TMI  LAKNG 
Sbjct: 134 VHDCI----TPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGE 193

Query: 338 GEDAIDLFYELKKTGLRIDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYV 397
           GE AID+F    + G + D ++F  VF AC  +GD++EG+LHFESM ++YG++ SM+ YV
Sbjct: 194 GERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYV 253

Query: 398 SIIDMLGSVGYVDEALEFIEKMPFEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPS 457
           ++I+ML + G++DEAL+F+E+M  EP V++WET+MN+    G +ELGDR  EL+++LD S
Sbjct: 254 NVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDAS 313

Query: 458 RLNEQSKAGHLPIKASDLAKEREKK-KLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLL 517
           R++++S AG +  KASD A E+ K+ +       + + R+HE+RAGDTSH       +  
Sbjct: 314 RMSKESNAGLVAAKASDSAMEKLKELRYCQMIRDDPKKRMHEFRAGDTSHLGT---VSAF 373

Query: 518 RGLREQMKEAGYIPETRFVLHDIDQEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNL 577
           R L+ QM + G++P TR     +++E K + LL  S +LA A+ +I+S AR P+ V++N+
Sbjct: 374 RSLKVQMLDIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNM 433

Query: 578 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSC 616
           R C D H+  K+IS I GR LI RD K++H +K+G+CSC
Sbjct: 434 RTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSC 465

[Close]

BLAST of Carg24970 vs. ExPASy Swiss-Prot
Match: Q9C6G2 (Pentatricopeptide repeat-containing protein At1g29710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H67 PE=3 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.3e-93
Identity = 174/396 (43.94%), Postives = 248/396 (62.63%), Query Frame = 0


Query: 224 TLEELDEFCREGKLKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVI 283
           T+E  D  C +G  +EAV++L+  E +   +DL R L L   CG+  +LE A+VV   +I
Sbjct: 87  TIETFDSLCIQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECII 146

Query: 284 KSQTPLKVSTYNKILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAID 343
              +P  V   N I+EMYS C S+DDA  +F +MP  N  +   M+     NG GE+AID
Sbjct: 147 ALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAID 206

Query: 344 LFYELKKTGLRIDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDML 403
           LF   K+ G + +G++F  VFS C++ GDV EG L F++M + YGI+PSM+HY S+  ML
Sbjct: 207 LFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKML 266

Query: 404 GSVGYVDEALEFIEKMPFEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQS 463
            + G++DEAL F+E+MP EP VD+WET+MN+SR HG +ELGDRC ELVE+LD +RL++ S
Sbjct: 267 ATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATRLDKVS 326

Query: 464 KAGHLPIKASDLAKEREKKKLANRNLLEVRSRVHEY---RAGDTSHPENDRIYTLLRGLR 523
            AG +  KASD  K+              RS  + Y   R  D+SHP+ + IY  L  LR
Sbjct: 327 SAGLVATKASDFVKKEP----------STRSEPYFYSTFRPVDSSHPQMNIIYETLMSLR 386

Query: 524 EQMKEAGYIPETRFVLHDIDQEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCG 583
            Q+KE GY+P+TR+    I      + + G+ E +AV   L+ S  RS I ++ N+R+ G
Sbjct: 387 SQLKEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVG 446

Query: 584 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCH 617
           DCH  +K++S I GR++I RDAK +H FK+G+C C+
Sbjct: 447 DCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCN 472

[Close]

BLAST of Carg24970 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.1e-78
Identity = 146/394 (37.06%), Postives = 236/394 (59.90%), Query Frame = 0


Query: 231 FCREGKLKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLK 290
           + + G   EA+++    E++   ++ S + + ++ C +  +LE  K +   ++K      
Sbjct: 384 YSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETG 443

Query: 291 VSTYNKILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKK 350
               N +L MY KCGS+++A  +F +M  +++ SW+TMI   +++G GE A+  F  +K+
Sbjct: 444 CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKR 503

Query: 351 TGLRIDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVD 410
            GL+ D    + V SACS  G VD+G  +F +MT++YG++P+ QHY  ++D+LG  G ++
Sbjct: 504 EGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLE 563

Query: 411 EALEFIEKMPFEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPI 470
           +A   ++ MPFEP   IW T++  SR HG  EL +   + +  ++P          +L  
Sbjct: 564 DAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYA 623

Query: 471 KA---SDLAKEREK------KKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLRE 530
            +    D+ K R +      KK+   + +E++++ H +  GD  HPE D I+  L  L  
Sbjct: 624 SSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDL 683

Query: 531 QMKEAGYIPETRFVLHDIDQEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGD 590
           +MK+AGY+ +T  VLHD+++E K   +  HSERLAVAYG++  S+  PIRVIKNLRVC D
Sbjct: 684 RMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCED 743

Query: 591 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSC 616
           CH+A+K +++I GR +I+RD  RFHHFKDG CSC
Sbjct: 744 CHNAIKYMARITGRLIILRDNNRFHHFKDGSCSC 777

[Close]

BLAST of Carg24970 vs. ExPASy TrEMBL
Match: A0A6J1EQB4 (pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111436435 PE=3 SV=1)

HSP 1 Score: 1206.4 bits (3120), Expect = 0.0e+00
Identity = 607/615 (98.70%), Postives = 608/615 (98.86%), Query Frame = 0


Query: 1   MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSL 60
           MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSL
Sbjct: 1   MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSL 60

Query: 61  QSYQSHGGFRSDSQSPGYYQHHAQSASFQSSSWPNQNILLERRENLTAYNGFNNGELQQN 120
           QSYQSHGGF SDSQSPGYYQHHAQSASFQSSSWPNQNILLERRENLTAYNGFNNGELQQN
Sbjct: 61  QSYQSHGGFSSDSQSPGYYQHHAQSASFQSSSWPNQNILLERRENLTAYNGFNNGELQQN 120

Query: 121 NYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMSQPHPQGQYQQ 180
           NYEVSGQNSWGTQIESRQFVHGNSLNY NSMPGLNNHIPISRQYEQNSMSQPHPQGQYQQ
Sbjct: 121 NYEVSGQNSWGTQIESRQFVHGNSLNYRNSMPGLNNHIPISRQYEQNSMSQPHPQGQYQQ 180

Query: 181 GGSVELYQPNPDTIQSHTIGTQVLNNTNSDEEIGVTKDNPYGGTLEELDEFCREGKLKEA 240
           GGSVELYQPNPDTIQS TIGTQVLNNTN+DEEIGVTKDNPYGGTLEELDEFCREGKLKEA
Sbjct: 181 GGSVELYQPNPDTIQSRTIGTQVLNNTNADEEIGVTKDNPYGGTLEELDEFCREGKLKEA 240

Query: 241 VQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEM 300
           VQILEM EKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEM
Sbjct: 241 VQILEMLEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEM 300

Query: 301 YSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKKTGLRIDGKMF 360
           YSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYE KKTGLRIDGKMF
Sbjct: 301 YSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYEFKKTGLRIDGKMF 360

Query: 361 IGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMP 420
           IGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMP
Sbjct: 361 IGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMP 420

Query: 421 FEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKERE 480
           FEPGVDIWE MMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKA DLAKERE
Sbjct: 421 FEPGVDIWEAMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKALDLAKERE 480

Query: 481 KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID 540
           KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID
Sbjct: 481 KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID 540

Query: 541 QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR 600
           QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR
Sbjct: 541 QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR 600

Query: 601 DAKRFHHFKDGLCSC 616
           DAKRFHHFKDGLCSC
Sbjct: 601 DAKRFHHFKDGLCSC 615

[Close]

BLAST of Carg24970 vs. ExPASy TrEMBL
Match: A0A6J1JYC1 (pentatricopeptide repeat-containing protein At4g32450, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111489962 PE=3 SV=1)

HSP 1 Score: 1195.6 bits (3092), Expect = 0.0e+00
Identity = 599/615 (97.40%), Postives = 604/615 (98.21%), Query Frame = 0


Query: 1   MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSL 60
           MCKKRAAILARRSLIALCN RSSCSSSVSNK LNQVRNLSIASEREEYQNDNGYHADNSL
Sbjct: 1   MCKKRAAILARRSLIALCNARSSCSSSVSNKALNQVRNLSIASEREEYQNDNGYHADNSL 60

Query: 61  QSYQSHGGFRSDSQSPGYYQHHAQSASFQSSSWPNQNILLERRENLTAYNGFNNGELQQN 120
           QSYQSHGGF SDSQSPGYYQHHAQ ASFQSSSWPNQNILLERRENLTAYNGFNNGELQQN
Sbjct: 61  QSYQSHGGFSSDSQSPGYYQHHAQRASFQSSSWPNQNILLERRENLTAYNGFNNGELQQN 120

Query: 121 NYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMSQPHPQGQYQQ 180
           NYEVSGQNSWGTQ+ESRQFVHGNSLNYHNSMPGLNNHIP+SRQYEQNSMSQPHPQGQYQQ
Sbjct: 121 NYEVSGQNSWGTQMESRQFVHGNSLNYHNSMPGLNNHIPVSRQYEQNSMSQPHPQGQYQQ 180

Query: 181 GGSVELYQPNPDTIQSHTIGTQVLNNTNSDEEIGVTKDNPYGGTLEELDEFCREGKLKEA 240
           GGSVELYQPNPDTIQS TIGTQVLNNTN+DEEIGVTKDNPYGGTLEELDEFCREGKLKEA
Sbjct: 181 GGSVELYQPNPDTIQSRTIGTQVLNNTNADEEIGVTKDNPYGGTLEELDEFCREGKLKEA 240

Query: 241 VQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEM 300
           VQILEM EKQNIPVDLSRYLNLMNACGEARSLEEAKVVC YVIKSQTPLKVSTYNKILEM
Sbjct: 241 VQILEMLEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCKYVIKSQTPLKVSTYNKILEM 300

Query: 301 YSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKKTGLRIDGKMF 360
           YSKCGSM+DAY+IFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYE KKTGLRIDGKMF
Sbjct: 301 YSKCGSMNDAYLIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYEFKKTGLRIDGKMF 360

Query: 361 IGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMP 420
           IGVFSACSVLGDVDEGMLHFESMTKNYGI PSM HYVSIIDMLGSVGYVDEALEFIE MP
Sbjct: 361 IGVFSACSVLGDVDEGMLHFESMTKNYGITPSMHHYVSIIDMLGSVGYVDEALEFIENMP 420

Query: 421 FEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKERE 480
           FEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKERE
Sbjct: 421 FEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKERE 480

Query: 481 KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID 540
           KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID
Sbjct: 481 KKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDID 540

Query: 541 QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR 600
           QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR
Sbjct: 541 QEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIR 600

Query: 601 DAKRFHHFKDGLCSC 616
           DAKRFHHFKDGLCSC
Sbjct: 601 DAKRFHHFKDGLCSC 615

[Close]

BLAST of Carg24970 vs. ExPASy TrEMBL
Match: A0A1S3B9H3 (pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103487241 PE=3 SV=1)

HSP 1 Score: 954.5 bits (2466), Expect = 2.2e-274
Identity = 519/744 (69.76%), Postives = 554/744 (74.46%), Query Frame = 0


Query: 1   MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSL 60
           MCKK+AAILARRSLIAL   RSSCSSSVS+K LN VRNLSIASEREE Q+DNGYHADNSL
Sbjct: 1   MCKKKAAILARRSLIALYTARSSCSSSVSHKALNLVRNLSIASEREECQDDNGYHADNSL 60

Query: 61  QSYQSHGG-FRSDSQSPGYYQHHAQSASFQS----------------------------- 120
           +SYQ+HGG   S +QSPGYYQHHAQS S QS                             
Sbjct: 61  RSYQTHGGSVSSYNQSPGYYQHHAQSTSLQSRPHQDILDGFYTGNSLQGPDRPSTSSAYR 120

Query: 121 ----SSW--------------------------------------------------PNQ 180
               SS+                                                  PN 
Sbjct: 121 QKPGSSFANTSHMHEIASRSYGQHYSGMPPNSCGFNENHHEACRETYQNTHHTSPVAPNG 180

Query: 181 NIL-------------------------------------------LERRENLTAYN--G 240
           N +                                           L  RE  +AYN  G
Sbjct: 181 NFIENGYNGVVAQDHNSYNGNTPRNFVEISNNVVREVDRSTSPNNQLGPREIFSAYNGYG 240

Query: 241 FNNGELQQNNYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMSQ 300
           ++N   QQN Y +SGQNSWGT  ES+Q++HG  L +HN M G NNHIP+SRQYEQNS+ Q
Sbjct: 241 YSNEATQQNIYGISGQNSWGTWRESKQYLHGTGLKHHNPMSGPNNHIPLSRQYEQNSIPQ 300

Query: 301 PHPQGQYQQGGSVELYQPNPDTIQSHTIGTQVLNNTNSDEEIGVTKDNPYGGTLEELDEF 360
            +PQGQY QG SVE YQPNPDT Q++ IG QVL N N++EEIG T+D   GG LE+LDEF
Sbjct: 301 QYPQGQYHQGSSVEQYQPNPDTNQNYMIGNQVLYNVNANEEIGKTRDRQQGGPLEKLDEF 360

Query: 361 CREGKLKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKV 420
           C+EG LKEAV+ILE+ EKQ+IPVDLSRYL+LMNACGEARSLEEAK VCNYVIKSQT +KV
Sbjct: 361 CKEGNLKEAVEILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKAVCNYVIKSQTHVKV 420

Query: 421 STYNKILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKKT 480
           STYNKILEMYSKCGSMDDAY IFNKMPSRN+TSWDTMITWLAKNGLGEDAIDLFYE KK 
Sbjct: 421 STYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKKA 480

Query: 481 GLRIDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDE 540
           GLR DGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGI PSM HYVSI+DMLGS G+VDE
Sbjct: 481 GLRPDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGITPSMHHYVSIVDMLGSTGFVDE 540

Query: 541 ALEFIEKMPFEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIK 600
           ALEFIEKMP EPGVDIWETMMNI+RAHGLMELGDRCFELVE LDPSRLNEQSKAG LPIK
Sbjct: 541 ALEFIEKMPLEPGVDIWETMMNIARAHGLMELGDRCFELVEHLDPSRLNEQSKAGLLPIK 600

Query: 601 ASDLAKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPE 616
           ASDL KEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPE
Sbjct: 601 ASDLEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPE 660

[Close]

BLAST of Carg24970 vs. ExPASy TrEMBL
Match: A0A5A7T5S8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G001570 PE=3 SV=1)

HSP 1 Score: 954.5 bits (2466), Expect = 2.2e-274
Identity = 519/744 (69.76%), Postives = 554/744 (74.46%), Query Frame = 0


Query: 1   MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSL 60
           MCKK+AAILARRSLIAL   RSSCSSSVS+K LN VRNLSIASEREE Q+DNGYHADNSL
Sbjct: 1   MCKKKAAILARRSLIALYTARSSCSSSVSHKALNLVRNLSIASEREECQDDNGYHADNSL 60

Query: 61  QSYQSHGG-FRSDSQSPGYYQHHAQSASFQS----------------------------- 120
           +SYQ+HGG   S +QSPGYYQHHAQS S QS                             
Sbjct: 61  RSYQTHGGSVSSYNQSPGYYQHHAQSTSLQSRPHQDILDGFYTGNSLQGPDRPSTSSAYR 120

Query: 121 ----SSW--------------------------------------------------PNQ 180
               SS+                                                  PN 
Sbjct: 121 QKPGSSFANTSHMHEIASRSYGQHYSGMPPNSCGFNENHHEACRETYQNTHHTSPVAPNG 180

Query: 181 NIL-------------------------------------------LERRENLTAYN--G 240
           N +                                           L  RE  +AYN  G
Sbjct: 181 NFIENGYNGVVAQDHNSYNGNTPRNFVEISNNVVREVDRSTSPNNQLGPREIFSAYNGYG 240

Query: 241 FNNGELQQNNYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMSQ 300
           ++N   QQN Y +SGQNSWGT  ES+Q++HG  L +HN M G NNHIP+SRQYEQNS+ Q
Sbjct: 241 YSNEATQQNIYGISGQNSWGTWRESKQYLHGTGLKHHNPMSGPNNHIPLSRQYEQNSIPQ 300

Query: 301 PHPQGQYQQGGSVELYQPNPDTIQSHTIGTQVLNNTNSDEEIGVTKDNPYGGTLEELDEF 360
            +PQGQY QG SVE YQPNPDT Q++ IG QVL N N++EEIG T+D   GG LE+LDEF
Sbjct: 301 QYPQGQYHQGSSVEQYQPNPDTNQNYMIGNQVLYNVNANEEIGKTRDRQQGGPLEKLDEF 360

Query: 361 CREGKLKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKV 420
           C+EG LKEAV+ILE+ EKQ+IPVDLSRYL+LMNACGEARSLEEAK VCNYVIKSQT +KV
Sbjct: 361 CKEGNLKEAVEILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKAVCNYVIKSQTHVKV 420

Query: 421 STYNKILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKKT 480
           STYNKILEMYSKCGSMDDAY IFNKMPSRN+TSWDTMITWLAKNGLGEDAIDLFYE KK 
Sbjct: 421 STYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKKA 480

Query: 481 GLRIDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDE 540
           GLR DGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGI PSM HYVSI+DMLGS G+VDE
Sbjct: 481 GLRPDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGITPSMHHYVSIVDMLGSTGFVDE 540

Query: 541 ALEFIEKMPFEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIK 600
           ALEFIEKMP EPGVDIWETMMNI+RAHGLMELGDRCFELVE LDPSRLNEQSKAG LPIK
Sbjct: 541 ALEFIEKMPLEPGVDIWETMMNIARAHGLMELGDRCFELVEHLDPSRLNEQSKAGLLPIK 600

Query: 601 ASDLAKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPE 616
           ASDL KEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPE
Sbjct: 601 ASDLEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPE 660

[Close]

BLAST of Carg24970 vs. ExPASy TrEMBL
Match: A0A5D3D8E5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold811G00560 PE=3 SV=1)

HSP 1 Score: 952.2 bits (2460), Expect = 1.1e-273
Identity = 518/744 (69.62%), Postives = 553/744 (74.33%), Query Frame = 0


Query: 1   MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSL 60
           MCKK+AAILARRSLIAL   RSSCSSSVS+K LN VRNLSIASEREE Q+DNGYHADNSL
Sbjct: 1   MCKKKAAILARRSLIALYTARSSCSSSVSHKALNLVRNLSIASEREECQDDNGYHADNSL 60

Query: 61  QSYQSHGG-FRSDSQSPGYYQHHAQSASFQS----------------------------- 120
           +SYQ+HGG   S +QSPGYYQHHAQS S QS                             
Sbjct: 61  RSYQTHGGSVSSYNQSPGYYQHHAQSTSLQSRPHQDILDGFYTGNSLQGPDRPSTSSAYR 120

Query: 121 ----SSW--------------------------------------------------PNQ 180
               SS+                                                  PN 
Sbjct: 121 QKPGSSFANTSHMHEIASRSYGQHYSGMPPNSCGFNENHHEACRETYQNTHHTSPVAPNG 180

Query: 181 NIL-------------------------------------------LERRENLTAYN--G 240
           N +                                           L  RE  +AYN  G
Sbjct: 181 NFIENGYNGVVAQDHNSYNGNTPRNFVEISNNVVREVDRSTSPNNQLGPREIFSAYNGYG 240

Query: 241 FNNGELQQNNYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMSQ 300
           ++N   QQN Y +SGQNSWGT  ES+Q++HG  L +HN M G NNHIP+SRQYEQNS+ Q
Sbjct: 241 YSNEATQQNIYGISGQNSWGTWRESKQYLHGTGLKHHNPMSGPNNHIPLSRQYEQNSIPQ 300

Query: 301 PHPQGQYQQGGSVELYQPNPDTIQSHTIGTQVLNNTNSDEEIGVTKDNPYGGTLEELDEF 360
            +PQGQY QG SVE YQPNPDT Q++ IG QVL N N++EEIG T+D   GG LE+LDEF
Sbjct: 301 QYPQGQYHQGSSVEQYQPNPDTNQNYMIGNQVLYNVNANEEIGKTRDRQQGGPLEKLDEF 360

Query: 361 CREGKLKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLKV 420
           C+EG LKEAV+ILE+ EKQ+IPVDLSRYL+LMNACGEARSLEEAK VCNYVIKSQT +KV
Sbjct: 361 CKEGNLKEAVEILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKAVCNYVIKSQTHVKV 420

Query: 421 STYNKILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKKT 480
           STYNKILEMYSKCGSMDDAY IFNKMPSRN+TSWDTMITWLAKNGLGEDAIDLFYE KK 
Sbjct: 421 STYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKKA 480

Query: 481 GLRIDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDE 540
           GLR DGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGI PSM HYVSI+DMLGS G+VDE
Sbjct: 481 GLRPDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGITPSMHHYVSIVDMLGSTGFVDE 540

Query: 541 ALEFIEKMPFEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPIK 600
           ALEFIEKMP EPGVDIWETMMNI+RAHGLMELGDRC ELVE LDPSRLNEQSKAG LPIK
Sbjct: 541 ALEFIEKMPLEPGVDIWETMMNIARAHGLMELGDRCLELVEHLDPSRLNEQSKAGLLPIK 600

Query: 601 ASDLAKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPE 616
           ASDL KEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPE
Sbjct: 601 ASDLEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPE 660

[Close]

BLAST of Carg24970 vs. TAIR 10
Match: AT2G25580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 436.8 bits (1122), Expect = 2.9e-122
Identity = 211/391 (53.96%), Postives = 282/391 (72.12%), Query Frame = 0


Query: 225 LEELDEFCREGKLKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIK 284
           +EE D FC+ GK+K+A+  +++    N  VDLSR L L   CGEA  L+EAK V   +  
Sbjct: 223 IEEYDAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISA 282

Query: 285 SQTPLKVSTYNKILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDL 344
           S + L +S+ + +LEMYS CG  ++A  +F KM  +NL +W  +I   AKNG GEDAID+
Sbjct: 283 SVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDM 342

Query: 345 FYELKKTGLRIDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLG 404
           F   K+ G   DG++F G+F AC +LGDVDEG+LHFESM+++YGI PS++ YVS+++M  
Sbjct: 343 FSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYA 402

Query: 405 SVGYVDEALEFIEKMPFEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSK 464
             G++DEALEF+E+MP EP VD+WET+MN+SR HG +ELGD C E+VE LDP+RLN+QS+
Sbjct: 403 LPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSR 462

Query: 465 AGHLPIKASDLAKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMK 524
            G +P+KASD+ KE  KK+  +  L  V+S + E+RAGDT+ PEND ++ LLR L+  M 
Sbjct: 463 EGFIPVKASDVEKESLKKR--SGILHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMV 522

Query: 525 EAGYIPETRFVLHDIDQEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHS 584
           E GY+ ETR  LHDIDQE K   LLGHSER+A A  +++S+ R P  VIKNLRVC DCH+
Sbjct: 523 EVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHN 582

Query: 585 ALKIISKIVGRELIIRDAKRFHHFKDGLCSC 616
           ALKI+S IVGRE+I RD KRFH  K+G C+C
Sbjct: 583 ALKIMSDIVGREVITRDIKRFHQMKNGACTC 611

[Close]

BLAST of Carg24970 vs. TAIR 10
Match: AT4G32450.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 433.3 bits (1113), Expect = 3.2e-121
Identity = 230/477 (48.22%), Postives = 310/477 (64.99%), Query Frame = 0


Query: 164 YEQ--NSMSQPHPQGQYQQGGSVELYQPNPDTIQSHTIGTQVLNNTNSDEEI-------- 223
           YEQ  N +S  +P  ++ Q G    Y  N    QS+   ++++N  N + +         
Sbjct: 72  YEQSLNPVSGQNPTNRFYQNG----YNRN----QSYGEHSEIINQRNQNWQSSDGCSSYG 131

Query: 224 ----GVTKDNPYGG-----------TLEELDEFCREGKLKEAVQILEMFEKQNIPVDLSR 283
               GV ++N  GG           +L+ELD  CREGK+K+AV+I++ +  +   VDL R
Sbjct: 132 TTGNGVPQENNTGGNHFQQDHSGHSSLDELDSICREGKVKKAVEIIKSWRNEGYVVDLPR 191

Query: 284 YLNLMNACGEARSLEEAKVVCNYVIKSQTPLKVSTYNKILEMYSKCGSMDDAYMIFNKMP 343
              +   CG+A++L+EAKVV  ++  S     +S YN I+EMYS CGS++DA  +FN MP
Sbjct: 192 LFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMP 251

Query: 344 SRNLTSWDTMITWLAKNGLGEDAIDLFYELKKTGLRIDGKMFIGVFSACSVLGDVDEGML 403
            RNL +W  +I   AKNG GEDAID F   K+ G + DG+MF  +F AC VLGD++EG+L
Sbjct: 252 ERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLL 311

Query: 404 HFESMTKNYGIIPSMQHYVSIIDMLGSVGYVDEALEFIEKMPFEPGVDIWETMMNISRAH 463
           HFESM K YGIIP M+HYVS++ ML   GY+DEAL F+E M  EP VD+WET+MN+SR H
Sbjct: 312 HFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVH 371

Query: 464 GLMELGDRCFELVEQLDPSRLNEQSKAGHLPIKASDLAKEREKKKLANRNLLEVRSRVHE 523
           G + LGDRC ++VEQLD SRLN++SKAG +P+K+SDL KE+ ++     N       +  
Sbjct: 372 GDLILGDRCQDMVEQLDASRLNKESKAGLVPVKSSDLVKEKLQRMAKGPNY-----GIRY 431

Query: 524 YRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDIDQEGKNDALLGHSERLAVA 583
             AGD S PEN  +Y  L+ L+E M E GY+P ++  LHD+DQE K++ L  H+ER A  
Sbjct: 432 MAAGDISRPENRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFI 491

Query: 584 YGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSC 616
              + + ARS IRV+KNLRVC DCH+ALK++SKIVGRELI RDAKRFHH KDG+CSC
Sbjct: 492 STFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSC 533

[Close]

BLAST of Carg24970 vs. TAIR 10
Match: AT2G34370.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 352.4 bits (903), Expect = 7.3e-97
Identity = 175/399 (43.86%), Postives = 266/399 (66.67%), Query Frame = 0


Query: 218 DNPYGGTLEELDEFCREGKLKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKV 277
           +N    T+E  D  C++ K++EA++++++ E +   VD  R L L   CGE  +LEEA+V
Sbjct: 74  NNHQSVTIETFDALCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARV 133

Query: 278 VCNYVIKSQTPLKVSTYNKILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGL 337
           V + +    TPL   +Y+ ++EMYS C S DDA  +FN+MP RN  +W TMI  LAKNG 
Sbjct: 134 VHDCI----TPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGE 193

Query: 338 GEDAIDLFYELKKTGLRIDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYV 397
           GE AID+F    + G + D ++F  VF AC  +GD++EG+LHFESM ++YG++ SM+ YV
Sbjct: 194 GERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYV 253

Query: 398 SIIDMLGSVGYVDEALEFIEKMPFEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPS 457
           ++I+ML + G++DEAL+F+E+M  EP V++WET+MN+    G +ELGDR  EL+++LD S
Sbjct: 254 NVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDAS 313

Query: 458 RLNEQSKAGHLPIKASDLAKEREKK-KLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLL 517
           R++++S AG +  KASD A E+ K+ +       + + R+HE+RAGDTSH       +  
Sbjct: 314 RMSKESNAGLVAAKASDSAMEKLKELRYCQMIRDDPKKRMHEFRAGDTSHLGT---VSAF 373

Query: 518 RGLREQMKEAGYIPETRFVLHDIDQEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNL 577
           R L+ QM + G++P TR     +++E K + LL  S +LA A+ +I+S AR P+ V++N+
Sbjct: 374 RSLKVQMLDIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNM 433

Query: 578 RVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSC 616
           R C D H+  K+IS I GR LI RD K++H +K+G+CSC
Sbjct: 434 RTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSC 465

[Close]

BLAST of Carg24970 vs. TAIR 10
Match: AT1G29710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 345.5 bits (885), Expect = 8.9e-95
Identity = 174/396 (43.94%), Postives = 248/396 (62.63%), Query Frame = 0


Query: 224 TLEELDEFCREGKLKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVI 283
           T+E  D  C +G  +EAV++L+  E +   +DL R L L   CG+  +LE A+VV   +I
Sbjct: 87  TIETFDSLCIQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECII 146

Query: 284 KSQTPLKVSTYNKILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAID 343
              +P  V   N I+EMYS C S+DDA  +F +MP  N  +   M+     NG GE+AID
Sbjct: 147 ALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAID 206

Query: 344 LFYELKKTGLRIDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDML 403
           LF   K+ G + +G++F  VFS C++ GDV EG L F++M + YGI+PSM+HY S+  ML
Sbjct: 207 LFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKML 266

Query: 404 GSVGYVDEALEFIEKMPFEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQS 463
            + G++DEAL F+E+MP EP VD+WET+MN+SR HG +ELGDRC ELVE+LD +RL++ S
Sbjct: 267 ATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATRLDKVS 326

Query: 464 KAGHLPIKASDLAKEREKKKLANRNLLEVRSRVHEY---RAGDTSHPENDRIYTLLRGLR 523
            AG +  KASD  K+              RS  + Y   R  D+SHP+ + IY  L  LR
Sbjct: 327 SAGLVATKASDFVKKEP----------STRSEPYFYSTFRPVDSSHPQMNIIYETLMSLR 386

Query: 524 EQMKEAGYIPETRFVLHDIDQEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCG 583
            Q+KE GY+P+TR+    I      + + G+ E +AV   L+ S  RS I ++ N+R+ G
Sbjct: 387 SQLKEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVG 446

Query: 584 DCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCH 617
           DCH  +K++S I GR++I RDAK +H FK+G+C C+
Sbjct: 447 DCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCN 472

[Close]

BLAST of Carg24970 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 295.8 bits (756), Expect = 8.1e-80
Identity = 146/394 (37.06%), Postives = 236/394 (59.90%), Query Frame = 0


Query: 231 FCREGKLKEAVQILEMFEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPLK 290
           + + G   EA+++    E++   ++ S + + ++ C +  +LE  K +   ++K      
Sbjct: 384 YSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETG 443

Query: 291 VSTYNKILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYELKK 350
               N +L MY KCGS+++A  +F +M  +++ SW+TMI   +++G GE A+  F  +K+
Sbjct: 444 CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKR 503

Query: 351 TGLRIDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVD 410
            GL+ D    + V SACS  G VD+G  +F +MT++YG++P+ QHY  ++D+LG  G ++
Sbjct: 504 EGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLE 563

Query: 411 EALEFIEKMPFEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPI 470
           +A   ++ MPFEP   IW T++  SR HG  EL +   + +  ++P          +L  
Sbjct: 564 DAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYA 623

Query: 471 KA---SDLAKEREK------KKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLRE 530
            +    D+ K R +      KK+   + +E++++ H +  GD  HPE D I+  L  L  
Sbjct: 624 SSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDL 683

Query: 531 QMKEAGYIPETRFVLHDIDQEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGD 590
           +MK+AGY+ +T  VLHD+++E K   +  HSERLAVAYG++  S+  PIRVIKNLRVC D
Sbjct: 684 RMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCED 743

Query: 591 CHSALKIISKIVGRELIIRDAKRFHHFKDGLCSC 616
           CH+A+K +++I GR +I+RD  RFHHFKDG CSC
Sbjct: 744 CHNAIKYMARITGRLIILRDNNRFHHFKDGSCSC 777

The following BLAST results are available for this feature:

BLAST of Carg24970 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032452.1	0.0e+00	100.00	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022929973.1	0.0e+00	98.70	pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Cucur...	[more]
XP_023530381.1	0.0e+00	98.54	pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita ...	[more]
XP_022994138.1	0.0e+00	97.40	pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita ...	[more]
XP_038876765.1	6.9e-291	72.47	pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Benin...	[more]

BLAST of Carg24970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q680H3	4.1e-121	53.96	Pentatricopeptide repeat-containing protein At2g25580 OS=Arabidopsis thaliana OX...	[more]
Q9SUU7	4.6e-120	48.22	Pentatricopeptide repeat-containing protein At4g32450, mitochondrial OS=Arabidop...	[more]
Q8S8Q7	1.0e-95	43.86	Pentatricopeptide repeat-containing protein At2g34370, mitochondrial OS=Arabidop...	[more]
Q9C6G2	1.3e-93	43.94	Pentatricopeptide repeat-containing protein At1g29710, mitochondrial OS=Arabidop...	[more]
Q9SY02	1.1e-78	37.06	Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX...	[more]

BLAST of Carg24970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EQB4	0.0e+00	98.70	pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like OS=Cuc...	[more]
A0A6J1JYC1	0.0e+00	97.40	pentatricopeptide repeat-containing protein At4g32450, mitochondrial OS=Cucurbit...	[more]
A0A1S3B9H3	2.2e-274	69.76	pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like OS=Cuc...	[more]
A0A5A7T5S8	2.2e-274	69.76	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5D3D8E5	1.1e-273	69.62	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Carg24970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25580.1	2.9e-122	53.96	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G32450.1	3.2e-121	48.22	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G34370.1	7.3e-97	43.86	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G29710.1	8.9e-95	43.94	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G02750.1	8.1e-80	37.06	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 475..495
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..86
None	No IPR available	PANTHER	PTHR24015:SF1801	OS01G0737900 PROTEIN	coord: 3..182 coord: 74..613
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 74..613
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 3..182
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 490..609 e-value: 6.7E-40 score: 135.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 339..503 e-value: 1.2E-18 score: 69.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 221..323 e-value: 2.1E-10 score: 42.4
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 396..419 e-value: 0.028 score: 14.6 coord: 231..251 e-value: 1.2 score: 9.5 coord: 324..352 e-value: 9.1E-5 score: 22.5 coord: 292..321 e-value: 1.4E-4 score: 21.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 324..356 e-value: 6.7E-5 score: 20.8 coord: 293..322 e-value: 4.2E-5 score: 21.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 290..324 score: 10.490022

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24970-RA	Carg24970-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding