
Carg24863 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTAATTAATATATATATTTTTTAAATTTAAAATTTAAGTAAAGAATTTTGTCAAAAGACGACGACTGAGAACCGTGGTTCTGGTTCTCTACTGCTTGCTTCGACCGAAAATGGCGTCTGTTCTGCAACTCCCAATCATCGACCTCTCCTCTCAAGACCGCGCCTCTGTTGCTCTCTCAATCCATGAGGTTCGTCGTATGATTTCCAAATCAACTCTCTCCATCGTTTTCCCTAACAGATTCTGATATTAATCTGTTTTCTTGGATTGGAAATTACGCACAGGCATGCTTGGATTACGGATTCTTTTACTTGATCAACCATGGCGTTGAAGACGAATTGCTCGAGAGAGTGTTTGACGAAAGTAGGAAGTTCTTTTCTCTTCCTATTGAGGAGAAGATGAAACTTGCTCGGAAGGAACATAGGGGATACACCGCTCTTTATGCCGAGAAGCTCGATCCCACCGCCTCGACTGATATAGGTTTTTGTTCTATTTTGATTTGAAATTTATGAATCTCGTCTGTTTATCTTGTGAAATTTGGGAGAAATTTGAACTGTGAGAGCTGTGTAAATGGTAGTTCTGCCGGGCTGTTGCTCCGAGCTTCTGAATGTTGTATGAAATGGTCTAAGAAAACCAATTAGTAAGTAAACTAACTATAAGGTTAAAGTGATTAGAATAGCTATAACTTCTAGATTGAGACACTTTTGTTAATGTTGTTTATAGATATGATGGCTGTGAAAATGCAACAATCCGGATTATATGAACTCTATTAGATGAGGTGTGCGCAAGCTGACCCAGACAATCGTTGATATTTGAAAAAAAGATTGATTGCATATGGTTTTACAGAAAGGTGAAAAGATGGTATATCCATGGACAATACTAGTCCACATTTTAGTGTTTTGTTTGACTGTAAATGACCATTTCCTAGTAGGGAGAGTGGATTGACTCGATAAAAGAACAAAAATGTGAGATCCCACATTGGTTCGAGGGGGCAACGAAACATTCTTTATAAAGGTGTGAAAACCTCTATTTAGTAGATGCGTTTTGAAACCTTGAGTGAAAGCCTGAAAGGGAAAGTCCAAAGAGAACAATACCTGATAGTGGTGGGCTTGGGCCATTACAAATGGTATCAAATGCGTTAGCGATGACGTTGGGCCCACAAGGGGGTGGATTGTGAGATCCCACATTGGTTCGAGGGGGGAAGCATTCCTTATAAAGGTGTGAAGACCTCCTGGTTATGAGATTCCACATTGGTTTGAGGGGGGAACATTCTTTATAAGGGTGTGAAAAAACCTACCTAGTAGACGCAATATCAGAGGACAATATTTGCTAGCGATGCGTTTTAAAAACCTTGAGAGGAAGCCCGAAAGGGAAATTCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGTCGTTACAAAAAAATTGATAACAAGAGTAAGAATCTTAAAAAATATCCAATACTCGTATCATCATTGAATTGTAAATGGTTCAGATTGGAAACTAATGCACAATCTCTACCGTTATTGAAGATTTGGTGTTCGAGAAAAGTTGTTTATCTTTGTATCTATGAATTTTCTGTGAATAGGGGATGCAAAAGAGAGCTATTATATTGGCCCTTTGGCAGGCAACGCAACTGAAAATGACTTAAATCAGTGGCCTTCAGGAGGTGAGGAATTACCCTATTAATGGTAGAAATTTGGAATCATTGATTATTCATGTTTATGAACTATTACTCTTTCTGGCAAGGAAATGGCAGAACTATTGCCTTCTTGGAGAGCTACTATGGAATCCTTCTATAAGCAAGCACTGTAAGTTCAAATGCCTTCAGGATTAATTTCAATACATACTGGTACTTACAGTGCAATAAAATTGGTACTATGTTGTTTTAAATTCATGTTTTGTTCATTGTACTCGAAAGTATTCTTATCTCGTTTATGCTGGACAGCTAAATGAATTTGGACTGGCTGTAATGTCTTGCTTTCTGTTTGGCTGGTACAGGCGTGTTGGAAGACAAATAATATCTTTGCTTGCATTGGCTCTGAATCTGGATGAGAATTTCTTTGAGAAAATTGGTGCCTTCAGTAAACCATCAGATTTTCTTCGGCTTCTACACTATCCAGGTTCAGTGACATACGTAACTTTTAATTACTGAAACTAAAGGGGAGAAAAGAAGCATATGTTCGTTTTTTCTTCCTGTCCCCCAAACCAAACATTTATGCTGAATTTTGTAAAGGATAAAATTTAAAGATGATGAAGATGAAATTTAAAGAAGTGTGATGAAATTTAATGGTCTATGGAAATGATTTTCAATCTTAGCGAGGATCCGACAAAATTGCAAACCATATGAATAGCAAAGGGGTAGAATGATTCTCCTTCCCTCATTCTCATTTCCTTATAAGTTAATGATGTACTTGGTCAGCTAACGACCTAAGCCCGCTACTAACATATATTGTCTTCTTTGGACTTTTCCTTTTGAGATTTCTCTCAAGGTTTTAAAAACGCGCCTTCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTATTCTTCTCGACGGACATGGAATTTCACTTTTTGTGTTATTCTTGTCAATGGTGATTTTTTGAAGTTCAAATATCTCTCTCCATTTTGCAGGTTGCTTTCTTCTTACATCCGAGTGACGAATGTGTCGTGGAATGTCTTCCAAGTTGTTGTAGCGAGTCATCTCCCCCGAGGTATTGACATTCCTTACTTTTATAATATTATCCCCAGAATCTCTCCGTTCCCATAGTGAATTTGATCCAATAATAATCTTATAGGACTGTTCTACGGAACTAATCGTATGAAGTTGTGTTCTAAGAAGAATTACAATGCTCTTTCTCCAATTTTTTGGCTACTCGAGTCGTTTTACCATACCACTTCAATTCAACTGAATATAACCTTAAAAACTAAAATTATAAGATCTCACATCGATTGGAAAAAGAAACGAGTGCCAGCAAAGACGCTAGGCCTCGAGGGTAGTAGATTGTGAGATGTCACGTTGGTTGGAGAAGGGAATGAAATATTCTTTACAAGGGTGTGGAAACCTCTACTTAGTAGATACATTTTAAGAACCTTGAGGGGAAGTCCGAAAGGAAAAGCCCAAAGATGACCATATTTGTTAGCGGTGGGCTAGAGTTGTTACAAAAATGTTCTTATAGAAAAGCCAAGATCAATCTGGAATGAATTCTAATGTCGTTTAGTTTGAACACAATCCTTGGACCATCTCCATGCTTCTCTGACTTTATGCATCTATTGCTAGTTACAAGTTTTATTGGCAGTTTTACGAGTAGAAATACGTGGAAGAACATTGATCATCATGATTTAGAGTTAGCAAAAACAAAAGCTAATAGAAAAAAGAATAGAGGTATTTTACTGGTATATGCTTATGTTTTTAGTGATGCTTATGGATTACTTGCTGGATCGAACCCAAAAATGTCTCGATATTCATAGATTATTTGAAATTTTTTCTTATCATGATCTCCGAAACAACTACAAATTTAATTGCTTAAAGTCTTCAAGATTATTGAATGTGCATGCAGATATCCTCCCATTTCCAGTATGGACTACTTGAAAGAACGTGTGAGGTTGGCTTATAAAGACGGATTTGCTTAGAAAATGTAAGATTCACTCCTCTCACTTCTATGTTTTTAGATCAAATTTAGATCAAGAAGCTTAAAAAGACGTTCATTTACATCATCACTAATGGATAAAGACCCGATATGTATGCTAATTAATCTGATAACCTTGTCAAAATTTACCTAGTGAATGTGTTATCATGTTACTGCCTTGACAATGACGTTAACGATAGAGATTAAAATTATGAAAATTATTAAAAGTGAAAGTATTAAGGTTTTTTTTTTATTAATTTAATTTTAATCCATTCCAGATCTAAAGAACGTGAGCCGCCACGTGGATGGCCAGATGAGTGGGACCCACGTTATCTATTTTCTTGCCGTCTGATCATCTCTTGTGGGGCCCATTAATATAGAGATAAAAATTAAAATAAAATAAGAAATGGATAAACTTTTCATAAAGCGTTTTCAAAAGCTAAGATGTCTGTACCTTTGGATAAGATGGGATAGGTGACTCAATTCATTTTTCCCCCCTTTTAAATAATTTAAAATTTATTTA CTTAATTAATATATATATTTTTTAAATTTAAAATTTAAGTAAAGAATTTTGTCAAAAGACGACGACTGAGAACCGTGGTTCTGGTTCTCTACTGCTTGCTTCGACCGAAAATGGCGTCTGTTCTGCAACTCCCAATCATCGACCTCTCCTCTCAAGACCGCGCCTCTGTTGCTCTCTCAATCCATGAGGCATGCTTGGATTACGGATTCTTTTACTTGATCAACCATGGCGTTGAAGACGAATTGCTCGAGAGAGTGTTTGACGAAAGTAGGAAGTTCTTTTCTCTTCCTATTGAGGAGAAGATGAAACTTGCTCGGAAGGAACATAGGGGATACACCGCTCTTTATGCCGAGAAGCTCGATCCCACCGCCTCGACTGATATAGGGGATGCAAAAGAGAGCTATTATATTGGCCCTTTGGCAGGCAACGCAACTGAAAATGACTTAAATCAGTGGCCTTCAGGAGAACTATTGCCTTCTTGGAGAGCTACTATGGAATCCTTCTATAAGCAAGCACTGCGTGTTGGAAGACAAATAATATCTTTGCTTGCATTGGCTCTGAATCTGGATGAGAATTTCTTTGAGAAAATTGGTGCCTTCAGTAAACCATCAGATTTTCTTCGGCTTCTACACTATCCAGATCTAAAGAACGTGAGCCGCCACGTGGATGGCCAGATGAGTGGGACCCACGTTATCTATTTTCTTGCCGTCTGATCATCTCTTGTGGGGCCCATTAATATAGAGATAAAAATTAAAATAAAATAAGAAATGGATAAACTTTTCATAAAGCGTTTTCAAAAGCTAAGATGTCTGTACCTTTGGATAAGATGGGATAGGTGACTCAATTCATTTTTCCCCCCTTTTAAATAATTTAAAATTTATTTA ATGGCGTCTGTTCTGCAACTCCCAATCATCGACCTCTCCTCTCAAGACCGCGCCTCTGTTGCTCTCTCAATCCATGAGGCATGCTTGGATTACGGATTCTTTTACTTGATCAACCATGGCGTTGAAGACGAATTGCTCGAGAGAGTGTTTGACGAAAGTAGGAAGTTCTTTTCTCTTCCTATTGAGGAGAAGATGAAACTTGCTCGGAAGGAACATAGGGGATACACCGCTCTTTATGCCGAGAAGCTCGATCCCACCGCCTCGACTGATATAGGGGATGCAAAAGAGAGCTATTATATTGGCCCTTTGGCAGGCAACGCAACTGAAAATGACTTAAATCAGTGGCCTTCAGGAGAACTATTGCCTTCTTGGAGAGCTACTATGGAATCCTTCTATAAGCAAGCACTGCGTGTTGGAAGACAAATAATATCTTTGCTTGCATTGGCTCTGAATCTGGATGAGAATTTCTTTGAGAAAATTGGTGCCTTCAGTAAACCATCAGATTTTCTTCGGCTTCTACACTATCCAGATCTAAAGAACGTGAGCCGCCACGTGGATGGCCAGATGAGTGGGACCCACGTTATCTATTTTCTTGCCGTCTGA MASVLQLPIIDLSSQDRASVALSIHEACLDYGFFYLINHGVEDELLERVFDESRKFFSLPIEEKMKLARKEHRGYTALYAEKLDPTASTDIGDAKESYYIGPLAGNATENDLNQWPSGELLPSWRATMESFYKQALRVGRQIISLLALALNLDENFFEKIGAFSKPSDFLRLLHYPDLKNVSRHVDGQMSGTHVIYFLAV Homology
BLAST of Carg24863 vs. NCBI nr
Match: KAG7015711.1 (hypothetical protein SDJN02_23348 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 402.5 bits (1033), Expect = 2.1e-108 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of Carg24863 vs. NCBI nr
Match: XP_022923380.1 (2-oxoglutarate-Fe(II) type oxidoreductase-like isoform X2 [Cucurbita moschata] >XP_022923381.1 2-oxoglutarate-Fe(II) type oxidoreductase-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 357.1 bits (915), Expect = 1.0e-94 Identity = 179/188 (95.21%), Postives = 183/188 (97.34%), Query Frame = 0
BLAST of Carg24863 vs. NCBI nr
Match: XP_022923378.1 (2-oxoglutarate-Fe(II) type oxidoreductase-like isoform X1 [Cucurbita moschata] >XP_022923379.1 2-oxoglutarate-Fe(II) type oxidoreductase-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 357.1 bits (915), Expect = 1.0e-94 Identity = 179/188 (95.21%), Postives = 183/188 (97.34%), Query Frame = 0
BLAST of Carg24863 vs. NCBI nr
Match: KAG6577674.1 (hypothetical protein SDJN03_25248, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 353.6 bits (906), Expect = 1.1e-93 Identity = 177/188 (94.15%), Postives = 182/188 (96.81%), Query Frame = 0
BLAST of Carg24863 vs. NCBI nr
Match: XP_023552453.1 (2-oxoglutarate-Fe(II) type oxidoreductase-like [Cucurbita pepo subsp. pepo] >XP_023552454.1 2-oxoglutarate-Fe(II) type oxidoreductase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 351.7 bits (901), Expect = 4.3e-93 Identity = 175/188 (93.09%), Postives = 181/188 (96.28%), Query Frame = 0
BLAST of Carg24863 vs. ExPASy Swiss-Prot
Match: Q76NT9 (1-aminocyclopropane-1-carboxylate oxidase OS=Dictyostelium discoideum OX=44689 GN=aco PE=2 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 7.2e-19 Identity = 64/187 (34.22%), Postives = 107/187 (57.22%), Query Frame = 0
BLAST of Carg24863 vs. ExPASy Swiss-Prot
Match: A6BM06 (1-aminocyclopropane-1-carboxylate oxidase OS=Dictyostelium mucoroides OX=31287 GN=aco PE=3 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 7.2e-19 Identity = 64/187 (34.22%), Postives = 107/187 (57.22%), Query Frame = 0
BLAST of Carg24863 vs. ExPASy Swiss-Prot
Match: Q7LL04 (UPF0676 protein C1494.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC1494.01 PE=3 SV=2) HSP 1 Score: 95.1 bits (235), Expect = 9.4e-19 Identity = 64/198 (32.32%), Postives = 95/198 (47.98%), Query Frame = 0
BLAST of Carg24863 vs. ExPASy Swiss-Prot
Match: Q4W946 (2-oxoglutarate-Fe(II) type oxidoreductase OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=encD PE=1 SV=2) HSP 1 Score: 90.5 bits (223), Expect = 2.3e-17 Identity = 61/189 (32.28%), Postives = 98/189 (51.85%), Query Frame = 0
BLAST of Carg24863 vs. ExPASy Swiss-Prot
Match: Q9FLV0 (Protein DOWNY MILDEW RESISTANCE 6 OS=Arabidopsis thaliana OX=3702 GN=DMR6 PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.3e-15 Identity = 53/174 (30.46%), Postives = 92/174 (52.87%), Query Frame = 0
BLAST of Carg24863 vs. ExPASy TrEMBL
Match: A0A6J1EBM7 (2-oxoglutarate-Fe(II) type oxidoreductase-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431095 PE=3 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 4.9e-95 Identity = 179/188 (95.21%), Postives = 183/188 (97.34%), Query Frame = 0
BLAST of Carg24863 vs. ExPASy TrEMBL
Match: A0A6J1E687 (2-oxoglutarate-Fe(II) type oxidoreductase-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431095 PE=3 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 4.9e-95 Identity = 179/188 (95.21%), Postives = 183/188 (97.34%), Query Frame = 0
BLAST of Carg24863 vs. ExPASy TrEMBL
Match: A0A6J1HQ38 (2-oxoglutarate-Fe(II) type oxidoreductase-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465074 PE=3 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 3.0e-92 Identity = 173/188 (92.02%), Postives = 179/188 (95.21%), Query Frame = 0
BLAST of Carg24863 vs. ExPASy TrEMBL
Match: A0A6J1HKU1 (2-oxoglutarate-Fe(II) type oxidoreductase-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465074 PE=3 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 3.0e-92 Identity = 173/188 (92.02%), Postives = 179/188 (95.21%), Query Frame = 0
BLAST of Carg24863 vs. ExPASy TrEMBL
Match: A0A5A7THD2 (1-aminocyclopropane-1-carboxylate oxidase-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00500 PE=3 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 3.6e-82 Identity = 155/188 (82.45%), Postives = 167/188 (88.83%), Query Frame = 0
BLAST of Carg24863 vs. TAIR 10
Match: AT4G16770.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 187.6 bits (475), Expect = 9.9e-48 Identity = 94/182 (51.65%), Postives = 128/182 (70.33%), Query Frame = 0
BLAST of Carg24863 vs. TAIR 10
Match: AT1G35190.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 156.4 bits (394), Expect = 2.4e-38 Identity = 83/189 (43.92%), Postives = 117/189 (61.90%), Query Frame = 0
BLAST of Carg24863 vs. TAIR 10
Match: AT3G46490.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 138.3 bits (347), Expect = 6.9e-33 Identity = 75/189 (39.68%), Postives = 109/189 (57.67%), Query Frame = 0
BLAST of Carg24863 vs. TAIR 10
Match: AT4G16765.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 135.6 bits (340), Expect = 4.5e-32 Identity = 68/132 (51.52%), Postives = 92/132 (69.70%), Query Frame = 0
BLAST of Carg24863 vs. TAIR 10
Match: AT4G16765.2 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 135.6 bits (340), Expect = 4.5e-32 Identity = 68/132 (51.52%), Postives = 92/132 (69.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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