Carg24836 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24836
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of unknown function, DUF538
Location	Carg_Chr16: 6514873 .. 6515404 (+)
RNA-Seq Expression	Carg24836
Synteny	Carg24836

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCTTCTTCTATTACACAATTTACCTCATCCTTCTCTGTCTTCCACAATCCCTTAGTCTCTCCTCCACCATCCACGACCTCCTCCGGTCGAAGGGGCTGCCGGCGGGGCTTGTTCCGAGGGAGGTAAAATCCTACTCCCTCTCTGAAAGCGGCCTTCTGGAAGTGTTCCTGGACGGCCCTTGTCTGACCAAATTCGAGAACAGGGTTCTGTATGAGAGCGTGGTTAAGGCGAATCTGAGCTACGGAAGTCTGATCGGCGTTCAGGGGCTGACTCAGGAGGAGCTGTTTGTATGGCTTCCAGTGAAGGACATAATCGTGGATGACCCTAAATCCGGCCTTATTCTCTTTGACATTGGCCTCGCTCATAAGCAACTCTCCCTTTCTCTGTTCGAAGACCCCCCCACCTGCAACCCTGAATCTACAGGTACTTTTTAATATGGGTTTTGATTTTCGCGTGGGATTGGGATTCGCAGAGCTTCCGCGGCATCATGTGAGGAAGGAGAAAGGATTTGAAGCTCTAAGATGA

mRNA sequence

ATGGCCGCCTTCTTCTATTACACAATTTACCTCATCCTTCTCTGTCTTCCACAATCCCTTAGTCTCTCCTCCACCATCCACGACCTCCTCCGGTCGAAGGGGCTGCCGGCGGGGCTTGTTCCGAGGGAGGTAAAATCCTACTCCCTCTCTGAAAGCGGCCTTCTGGAAGTGTTCCTGGACGGCCCTTGTCTGACCAAATTCGAGAACAGGGTTCTGTATGAGAGCGTGGTTAAGGCGAATCTGAGCTACGGAAGTCTGATCGGCGTTCAGGGGCTGACTCAGGAGGAGCTGTTTGTATGGCTTCCAGTGAAGGACATAATCGTGGATGACCCTAAATCCGGCCTTATTCTCTTTGACATTGGCCTCGCTCATAAGCAACTCTCCCTTTCTCTGTTCGAAGACCCCCCCACCTGCAACCCTGAATCTACAGAGCTTCCGCGGCATCATGTGAGGAAGGAGAAAGGATTTGAAGCTCTAAGATGA

Coding sequence (CDS)

ATGGCCGCCTTCTTCTATTACACAATTTACCTCATCCTTCTCTGTCTTCCACAATCCCTTAGTCTCTCCTCCACCATCCACGACCTCCTCCGGTCGAAGGGGCTGCCGGCGGGGCTTGTTCCGAGGGAGGTAAAATCCTACTCCCTCTCTGAAAGCGGCCTTCTGGAAGTGTTCCTGGACGGCCCTTGTCTGACCAAATTCGAGAACAGGGTTCTGTATGAGAGCGTGGTTAAGGCGAATCTGAGCTACGGAAGTCTGATCGGCGTTCAGGGGCTGACTCAGGAGGAGCTGTTTGTATGGCTTCCAGTGAAGGACATAATCGTGGATGACCCTAAATCCGGCCTTATTCTCTTTGACATTGGCCTCGCTCATAAGCAACTCTCCCTTTCTCTGTTCGAAGACCCCCCCACCTGCAACCCTGAATCTACAGAGCTTCCGCGGCATCATGTGAGGAAGGAGAAAGGATTTGAAGCTCTAAGATGA

Protein sequence

MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPKSGLILFDIGLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR

Homology

[Close]

BLAST of Carg24836 vs. NCBI nr
Match: KAG7015522.1 (hypothetical protein SDJN02_23158, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 320.1 bits (819), Expect = 1.1e-83
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLD 60
           MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLD
Sbjct: 1   MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLD 60

Query: 61  GPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPKSGLILFDI 120
           GPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPKSGLILFDI
Sbjct: 61  GPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPKSGLILFDI 120

Query: 121 GLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR 161
           GLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR
Sbjct: 121 GLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR 160

[Close]

BLAST of Carg24836 vs. NCBI nr
Match: XP_022932130.1 (uncharacterized protein LOC111438453 [Cucurbita moschata])

HSP 1 Score: 318.9 bits (816), Expect = 2.4e-83
Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLD 60
           MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLD
Sbjct: 1   MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLD 60

Query: 61  GPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPKSGLILFDI 120
           GPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPKSGLILFDI
Sbjct: 61  GPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPKSGLILFDI 120

Query: 121 GLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR 161
           GLAHKQLSLSLFEDPPTCNP+STELPRHHVRKEKGFEALR
Sbjct: 121 GLAHKQLSLSLFEDPPTCNPQSTELPRHHVRKEKGFEALR 160

[Close]

BLAST of Carg24836 vs. NCBI nr
Match: KAG6577450.1 (hypothetical protein SDJN03_25024, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 283.9 bits (725), Expect = 8.7e-73
Identity = 142/143 (99.30%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLD 60
           MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLD
Sbjct: 1   MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLD 60

Query: 61  GPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPKSGLILFDI 120
           GPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPKSGLILFDI
Sbjct: 61  GPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPKSGLILFDI 120

Query: 121 GLAHKQLSLSLFEDPPTCNPEST 144
           GLAHKQLSLSLFEDPPTCNP+ST
Sbjct: 121 GLAHKQLSLSLFEDPPTCNPQST 143

[Close]

BLAST of Carg24836 vs. NCBI nr
Match: XP_023546381.1 (uncharacterized protein LOC111805505 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.9 bits (668), Expect = 3.5e-66
Identity = 128/159 (80.50%), Postives = 146/159 (91.82%), Query Frame = 0


Query: 2   AAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDG 61
           A FFY ++  + LCLP SLSLSSTIHDLLRS+GLPAGL+P+EVKSY+LS++GLLEVFLDG
Sbjct: 4   AFFFYISLLSLSLCLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDG 63

Query: 62  PCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPKSGLILFDIG 121
           PCLTK+ENRVL+ESVV+ANLSYGSLIGVQGLTQEELF+WLPVKDIIVDDPKSGLILFDIG
Sbjct: 64  PCLTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIG 123

Query: 122 LAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR 161
           +AHKQL+LSLFEDPP+C  +  E  R+ VRKEKGFEALR
Sbjct: 124 VAHKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR 162

[Close]

BLAST of Carg24836 vs. NCBI nr
Match: XP_038905336.1 (uncharacterized protein LOC120091403 [Benincasa hispida])

HSP 1 Score: 259.6 bits (662), Expect = 1.8e-65
Identity = 132/166 (79.52%), Postives = 148/166 (89.16%), Query Frame = 0


Query: 1   MAAFFYYTIY------LILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGL 60
           MAAFF++TI+      LI L LP SLSLSSTIHDLLRSKGLP GL+P+EVKSYSLS +GL
Sbjct: 1   MAAFFHFTIFFTISLSLISLSLPSSLSLSSTIHDLLRSKGLPPGLLPKEVKSYSLSPNGL 60

Query: 61  LEVFLDGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPKSG 120
           LEVFLDGPCLTK+ENRVL++SVV+ANLSYGSLIGVQGLTQEELF+WLPVKDIIVDDPKSG
Sbjct: 61  LEVFLDGPCLTKYENRVLFQSVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSG 120

Query: 121 LILFDIGLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR 161
           LILFDIG+AHKQL+LSLFEDPP+C  +     R+HVRKEKGFEALR
Sbjct: 121 LILFDIGVAHKQLALSLFEDPPSCKSQPKGGLRNHVRKEKGFEALR 166

[Close]

BLAST of Carg24836 vs. ExPASy TrEMBL
Match: A0A6J1F1C6 (uncharacterized protein LOC111438453 OS=Cucurbita moschata OX=3662 GN=LOC111438453 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.2e-83
Identity = 159/160 (99.38%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLD 60
           MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLD
Sbjct: 1   MAAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLD 60

Query: 61  GPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPKSGLILFDI 120
           GPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPKSGLILFDI
Sbjct: 61  GPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPKSGLILFDI 120

Query: 121 GLAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR 161
           GLAHKQLSLSLFEDPPTCNP+STELPRHHVRKEKGFEALR
Sbjct: 121 GLAHKQLSLSLFEDPPTCNPQSTELPRHHVRKEKGFEALR 160

[Close]

BLAST of Carg24836 vs. ExPASy TrEMBL
Match: A0A6J1JYV3 (uncharacterized protein LOC111489122 OS=Cucurbita maxima OX=3661 GN=LOC111489122 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 5.5e-65
Identity = 126/157 (80.25%), Postives = 144/157 (91.72%), Query Frame = 0


Query: 4   FFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPC 63
           FFY ++  + L LP SLSLSSTIHDLLRS+GLPAGL+P+EVKSY+LS++GLLEVFLDGPC
Sbjct: 13  FFYISLLFLSLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPC 72

Query: 64  LTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPKSGLILFDIGLA 123
           LTK+ENRVL+ESVV+ANLSYGSLIGVQGLTQEELF+WLPVKDIIVDDPKSGLILFDIG+A
Sbjct: 73  LTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVA 132

Query: 124 HKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR 161
           HKQL+LSLFEDPP+C  +  E  R+ VRKEKGFEALR
Sbjct: 133 HKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR 169

[Close]

BLAST of Carg24836 vs. ExPASy TrEMBL
Match: A0A6J1FV48 (uncharacterized protein LOC111447556 OS=Cucurbita moschata OX=3662 GN=LOC111447556 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.2e-64
Identity = 126/157 (80.25%), Postives = 144/157 (91.72%), Query Frame = 0


Query: 4   FFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPC 63
           FFY ++  + L LP SLSLSSTIHDLLRS+GLPAGL+P+EVKSY+LS++GLLEVFLDGPC
Sbjct: 13  FFYISLLSLPLRLPHSLSLSSTIHDLLRSQGLPAGLLPKEVKSYTLSQNGLLEVFLDGPC 72

Query: 64  LTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPKSGLILFDIGLA 123
           LTK+ENRVL+ESVV+ANLSYGSLIGVQGLTQEELF+WLPVKDIIVDDPKSGLILFDIG+A
Sbjct: 73  LTKYENRVLFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIGVA 132

Query: 124 HKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR 161
           HKQL+LSLFEDPP+C  +  E  R+ VRKEKGFEALR
Sbjct: 133 HKQLALSLFEDPPSCKAQPKEALRNQVRKEKGFEALR 169

[Close]

BLAST of Carg24836 vs. ExPASy TrEMBL
Match: A0A6J1CPB7 (uncharacterized protein LOC111012868 OS=Momordica charantia OX=3673 GN=LOC111012868 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.0e-62
Identity = 122/160 (76.25%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 2   AAFFYYTIYLILLCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDG 61
           A FF + + L+ L  P SLSL S+IH+LLRS+GLPAGL+PREVKSY+LS +GLLEVFL+G
Sbjct: 3   AFFFSFILLLVFLSPPSSLSLPSSIHELLRSQGLPAGLLPREVKSYALSRNGLLEVFLEG 62

Query: 62  PCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPKSGLILFDIG 121
           PCLTK+ENRV++ESVV+ANLSYGSLIGVQGLTQEELF+WLPVKDIIVDDPKSGLILFDIG
Sbjct: 63  PCLTKYENRVMFESVVRANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIG 122

Query: 122 LAHKQLSLSLFEDPPTCNPE-STELPRHHVRKEKGFEALR 161
           +AHKQL+LSLFEDPP+CNP    +L R+ VRKEKGFEA++
Sbjct: 123 VAHKQLALSLFEDPPSCNPHPKGDLRRNRVRKEKGFEAMK 162

[Close]

BLAST of Carg24836 vs. ExPASy TrEMBL
Match: A0A0A0L572 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G088990 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.4e-62
Identity = 125/159 (78.62%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 3   AFFYYTIYLILLCLPQSLSLSS-TIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDG 62
           + F + I LI L LP SLSLSS TIHDLLRSKGLP GL+P+EVKSYSLS +GLL+VFLDG
Sbjct: 9   SIFIFYISLISLSLPSSLSLSSTTIHDLLRSKGLPPGLLPKEVKSYSLSPNGLLKVFLDG 68

Query: 63  PCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPKSGLILFDIG 122
           PCLTK+ENRV++ESVV ANLSYGSLIGVQGLTQEELF+WLPVKDIIVDDPKSGLILFDIG
Sbjct: 69  PCLTKYENRVIFESVVTANLSYGSLIGVQGLTQEELFLWLPVKDIIVDDPKSGLILFDIG 128

Query: 123 LAHKQLSLSLFEDPPTCNPESTELPRHHVRKEKGFEALR 161
           +AHKQL+LSLFEDPP+C  +S  + R+HVRKEKGFE  R
Sbjct: 129 VAHKQLALSLFEDPPSCKSQSKGVLRNHVRKEKGFEGFR 167

[Close]

BLAST of Carg24836 vs. TAIR 10
Match: AT5G54530.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 183.7 bits (465), Expect = 1.1e-46
Identity = 92/152 (60.53%), Postives = 119/152 (78.29%), Query Frame = 0


Query: 11  LILLCLPQSLSLSS----TIHDLLRSKGLPAGLVPREVKSYSLSESGLLEVFLDGPCLTK 70
           L+L  L  SLSLSS    T+HD+LRS+GLPAGL+P+EV SY L   G LEVFL  PC  K
Sbjct: 10  LLLTTLRLSLSLSSPSYPTVHDVLRSEGLPAGLLPQEVDSYILHNDGRLEVFLAAPCYAK 69

Query: 71  FENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPKSGLILFDIGLAHKQ 130
           FE  V +E+VV+ NLSYGSL+GV+GL+Q+ELF+WL VKDI+V++P SG+I+FDIG+A KQ
Sbjct: 70  FETNVHFEAVVRGNLSYGSLVGVEGLSQKELFLWLQVKDIVVENPNSGVIVFDIGVAFKQ 129

Query: 131 LSLSLFEDPPTCNPESTELPRHHVRKEKGFEA 159
           LSLSLFEDPP C P+   + +  +R+++GFEA
Sbjct: 130 LSLSLFEDPPKCKPDG--VLKKKMRRDRGFEA 159

[Close]

BLAST of Carg24836 vs. TAIR 10
Match: AT1G61667.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 164.1 bits (414), Expect = 9.4e-41
Identity = 81/134 (60.45%), Postives = 104/134 (77.61%), Query Frame = 0


Query: 9   IYLILLCLP-QSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLSE-SGLLEVFLDGPCLTK 68
           + L+LL +P  + S  S+I +LL ++GLP GL P  V+SYSL + +G LEV L  PC  +
Sbjct: 4   LLLLLLLVPFITPSSQSSIRNLLEARGLPGGLFPDNVESYSLDDKTGELEVQLQNPCFAR 63

Query: 69  FENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPKSGLILFDIGLAHKQ 128
           FENRV ++ V+KANLSYG L+G++GLTQEELF+WLPVK I V+DP SGL+LFDIG+AHKQ
Sbjct: 64  FENRVYFDRVIKANLSYGGLVGLEGLTQEELFLWLPVKGIAVNDPSSGLVLFDIGVAHKQ 123

Query: 129 LSLSLFEDPPTCNP 141
           +S SLFEDPP C P
Sbjct: 124 ISRSLFEDPPVCYP 137

[Close]

BLAST of Carg24836 vs. TAIR 10
Match: AT3G07470.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 109.8 bits (273), Expect = 2.1e-24
Identity = 53/147 (36.05%), Postives = 87/147 (59.18%), Query Frame = 0


Query: 14  LCLPQSLSLSSTIHDLLRSKGLPAGLVPREVKSYSLS-ESGLLEVFLDGPCLTKFENRVL 73
           + +  ++S + TI+++L + GLP+G+ P+ V+ ++   E+G   V+L+  C  K+E  + 
Sbjct: 19  ISISTAISETETIYEILLANGLPSGIFPKGVREFTFDVETGRFSVYLNQACEAKYETEIH 78

Query: 74  YESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPKSGLILFDIGLAHKQLSLSLF 133
           Y++ +   +    +  + G++ +ELF+W PVK I VD P SGLI FD+G+  KQ SLSLF
Sbjct: 79  YDANITGTIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVVRKQYSLSLF 138

Query: 134 EDPPTCNP----ESTELPRHHVRKEKG 156
           E P  C P       ELP + V +  G
Sbjct: 139 ETPRDCVPVRGIHKVELPLYRVDQNLG 165

[Close]

BLAST of Carg24836 vs. TAIR 10
Match: AT5G16380.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-23
Identity = 63/151 (41.72%), Postives = 87/151 (57.62%), Query Frame = 0


Query: 4   FFYYTIYLILLCLPQSLSL-SSTIHDLLRSKGLPAGLVPREVKSYSLS-ESGLLEVFLDG 63
           FF   +    +  PQ  SL   + +D LR   LPAG+VP+ V ++S+  ++G   V L  
Sbjct: 8   FFLIIVLFSSILFPQLSSLPDPSFYDYLRESNLPAGIVPKGVTNFSIDIKTGRFTVALPV 67

Query: 64  PCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPKSGLILFDIG 123
           PC  KFEN+  ++  +   LS G +  + G+TQ+ELF+W  VK I VD   SGLI FD+G
Sbjct: 68  PCDAKFENQFHFDYNISGVLSDGRIGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHFDVG 127

Query: 124 LAHKQLSLSLFEDPPTC-----NPESTELPR 148
           +A KQLSLSLFE P  C      P + +L R
Sbjct: 128 VADKQLSLSLFESPRDCTAAESQPRAVDLSR 158

[Close]

BLAST of Carg24836 vs. TAIR 10
Match: AT3G07460.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 106.3 bits (264), Expect = 2.3e-23
Identity = 55/139 (39.57%), Postives = 85/139 (61.15%), Query Frame = 0


Query: 9   IYLILLC--LPQSLSLSS------TIHDLLRSKGLPAGLVPREVKSYSLS-ESGLLEVFL 68
           + + LLC  L   +S+S+      +I ++L + GLP GL P+ VK ++++ E+G   V+L
Sbjct: 5   VQITLLCFVLAAGISISAVIAENESIDEILLANGLPLGLFPKGVKGFTVNGETGRFSVYL 64

Query: 69  DGPCLTKFENRVLYESVVKANLSYGSLIGVQGLTQEELFVWLPVKDIIVDDPKSGLILFD 128
           +  C  K+E  + Y+ +V   + Y  +  + G++ +ELF+WL VK I VD P SGLI FD
Sbjct: 65  NQSCQAKYETELHYDEIVSGTIGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFD 124

Query: 129 IGLAHKQLSLSLFEDPPTC 139
           +G+  KQ SLSLFE P  C
Sbjct: 125 VGVLRKQYSLSLFETPRDC 143

The following BLAST results are available for this feature:

BLAST of Carg24836 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015522.1	1.1e-83	100.00	hypothetical protein SDJN02_23158, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022932130.1	2.4e-83	99.38	uncharacterized protein LOC111438453 [Cucurbita moschata]	[more]
KAG6577450.1	8.7e-73	99.30	hypothetical protein SDJN03_25024, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023546381.1	3.5e-66	80.50	uncharacterized protein LOC111805505 [Cucurbita pepo subsp. pepo]	[more]
XP_038905336.1	1.8e-65	79.52	uncharacterized protein LOC120091403 [Benincasa hispida]	[more]

BLAST of Carg24836 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg24836 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F1C6	1.2e-83	99.38	uncharacterized protein LOC111438453 OS=Cucurbita moschata OX=3662 GN=LOC1114384...	[more]
A0A6J1JYV3	5.5e-65	80.25	uncharacterized protein LOC111489122 OS=Cucurbita maxima OX=3661 GN=LOC111489122...	[more]
A0A6J1FV48	1.2e-64	80.25	uncharacterized protein LOC111447556 OS=Cucurbita moschata OX=3662 GN=LOC1114475...	[more]
A0A6J1CPB7	2.0e-62	76.25	uncharacterized protein LOC111012868 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A0A0L572	4.4e-62	78.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G088990 PE=4 SV=1	[more]

BLAST of Carg24836 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54530.1	1.1e-46	60.53	Protein of unknown function, DUF538	[more]
AT1G61667.1	9.4e-41	60.45	Protein of unknown function, DUF538	[more]
AT3G07470.1	2.1e-24	36.05	Protein of unknown function, DUF538	[more]
AT5G16380.1	1.4e-23	41.72	Protein of unknown function, DUF538	[more]
AT3G07460.1	2.3e-23	39.57	Protein of unknown function, DUF538	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 27..133 e-value: 7.1E-26 score: 90.8
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	T31J12.3 PROTEIN-RELATED	coord: 6..159
IPR036758	At5g01610-like superfamily	GENE3D	2.30.240.10		coord: 17..139 e-value: 8.9E-26 score: 92.2
IPR036758	At5g01610-like superfamily	SUPERFAMILY	141562	At5g01610-like	coord: 7..139
None	No IPR available	PANTHER	PTHR31676:SF118	SUBFAMILY NOT NAMED	coord: 6..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24836-RA	Carg24836-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane