Carg24741 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg24741
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPeptidylprolyl isomerase
LocationCarg_Chr09: 5743126 .. 5750571 (+)
RNA-Seq ExpressionCarg24741
SyntenyCarg24741
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATAGAATCCTCTCCTTTTCTTCCTCATCCACTTCGTTTCAACTTATCCATTAACGTCATCGTCTTCGCAACTTTTCAGGCTGTGCCATGGGAGTTCTCTCGTTCTGGAGCTTGTTTCGCTCTCCTTCCGCCGTCAAATTTTCTAGGTATGCTCTTCCATGGCCGAATTTCTATACTCCACTCGGATTCTGTTGAATTTTGTGTTTCTCTACTCAATAGTAGGTTTCCCTTTGCGTTTGTAGCATTCATTGAAATATACTTTAGGTGTCCTGTGTTAAATTTTTATGTTGTGATTAGTTTGAAGAAACGTACTGAGATTCTTTGATTACTGAGATTTTAAGGCACACGGAGAATGTGAATAAAGATAAAATTTATGAACTTAAGCTTTTGGATTTGATGGCAGTTCAGCATGGAATTAAAGAACGAGCTTCTTTGTTTGAACTTTTGGGATGGTATTTCCTGTCCAATTAAAATAGTGAGAACCAGGCTTCGGGTTGAAGGATGATTTAGATGTTAGAAGCCACGAGTATGATATTGTCCACTTTGAGCATAAGCTCTCGTGACTTTGGTTTTGGTTTCTCTAGCCTCATACCAATGGAGATATATTCCTTACTTATGAACCCATGATCATCACCTTAATTAGCCAATGTAGGACTCTCTCCCAACAATCCTCCCTTCGAACAAAGTACACCATAGAGCCTCTCCTGAGACCTATGGAGCCCTCGAAAATCTTCCCCTTAATCGAGGCTTGACTCCTTTTCTACGGTCCTTGAACAAAGAGCACCATTTGTTTGACACTTGAGTCACTTTTGACTCTATTCGAAGCTTACAACTTCTTTGTTCGACATTTGAGGATTCTATTGACATGGCTAAGTTAAGGGCATGACTCTAATACCATGTTAGAAACCACGAACCTCCACGATGGTATGATGTTGTTCACTTTGAGCATAAGCTCTCGTGTCTTTGCTTTTTGTTTCCCCAAAAGGCCTCATACCATTGGAGATATATTTCTTATTTATAAACATATGATCATACCCTTAATTAGTCAACGAGGAACTCTCTCCCCAACCGTCCTCAACATTAAATATCATCTAAGCTTTCTTATAGCCTATGCTGCTGGGAATTGCAAAATTGTATATAGATTGCATAAATTGTTTGATCATGGCGTGTTTGGTACTGATAATTTTCTTTGTTGAGTTATTGGTTTTTTGCTCACCAATCGGTTGCATTATTTTCATTTGCATGGTATCTGTGAGATCCCACATCGGTTAGAGAGGGAAAAGAAGCGTTCATTGTAAGGGTGTGGAAACCTTTCCCTAGTAGACTGTTTTAGAACCATGAGGCCGACAACGATACATAATGGGCTAAAGTAGGACAATATCTGCTAGCAGTGGCCTTGAGTTGTTACAAATGATATCAGAGCCAGACACTAGGCGCTGTGTCAGCGAGTACGTTGGGCCTCAGGAAGGGGGGGGGGGTGGATTGTGAGATCACACATCGGTTGGAGAAGGGAACGTAGCATTCCTTTTACCCTTCCCTAGAGACGCGTTTTAAAATCATGAGGCTGACGGCGATACATAACGGACCAAAGCAAACAATATTTGCTAGCGGTGGGCTTGGATTATTACAAATAGTATTAGAGCCAGTTACCAGGCAACATGCCAGCGAGGACGTTGGGCCTCCAAAGGGGGTGGATTGCGAGATCCTACATCGGTTGGAGAGGAGAACGAAACATTTCTTATAAGGGTGTGGAAACCTCTCCGTAGTAGACGTGTTCTAAAATCGTGAGGCTGATGGCGATACATAACGGGCCAAAGCGAACAATATCTGCTAGTCGTGAGCTTGAACTATGTTGCAAATGGTATCAGAGCTAGTCACTGGGCAGTCTATCAGTGAGGACGTTGGGCTTCCAAGGAGGGTGGATTGTGAGATCCCACATCGATTGGAGATGGGAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAACCATGAGACTAACCGCGATACGTAACGTGCCAAAGCAGACAATATCCGCTATCGGTGGGTTTGAGTTATTACAAATGGTATCAAAGCCGCACATCGGGCGGTGTGCCAGTGAGGACGTTGGCTCCTAAAGGGAGTGGATTGTGAGACCCCGCATTGGTTGGAGAGGGGAACAAAACATTCCTTAGAAGGATGTGGAAACCTCTCTATAGTAAACACATTTTAAAACCTCAAGGGGAAGTCCATAAGGGAAAGCCCAAAGATGACGATACTTGCTAGCGGTGGGATTAGACTATTACACTATTTTAAGTCCGGTGTCAAAATATGTCATAACGTCTCTCTCCTCCTTTCAATCAGGATGATTGTTTAATGTTTCAAACTGTTCTTCAATCCAAGAACTCCAAACCTTAAATTCTGAGAATAGATATCTATATCAAACGATACTCACTTCTTGACAGCTTATGAATGGATGTTCTTGTAGTTTCCACAAAGCCATTTGCATGGCTGATGAAGTATCCATATCCAAGCATCATATGGTCAATCACTTAGACATTTTTTCTGGCAAACGATTTCCAAGAAGGCTGTTCTCGCAGTTCATTGGTTCGTATCCGATCTTGTTATATGCAAATCCTAGTTTCGGTGCACCGATGATGGACGTGCAAGAACCGGAAATAGTTCGGTATGTATTTCATTTGTAACTTTTTTCTTGAAATGTTCATATCATTTTCTTAACATCACAATGAAGAGGGCTGCCATGACCATCCATCAAAAGTGCTTTACATGTTCTCATTTGGAATTGTTGTTTAAATTTTGAAGCTTTCAGGACGCTAAAGCTCGACAGTGGAGTTCGGATTCAAGGTAGAATTTCTTTGTTTAAAATCTCAAGATTTAATAAATCTTTTTGTAACGATCCAAGCCCACCGCTAGTAGATATTGTCTTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTAAAGGCTTTAAAACACGTATAATAGGGGAAGGTTTCCACACCCTTATAGAGGATGTTTTGTTCTCCTCCCCAACCAATGTGGGACATCACAATCCACCCCCCTTCGGGGCCCAGCGTCCTCGCTGGCACTCATTCCTTTCTCCAATCGATGTGGGACCACCACCAAATCCACCCCCTTTGGGGTCCAGCGTCCTTATTGGCACACCACCTCGTGTCTATCCCCCTTCGGGAAACAGTGAGAAAGCTGGCACATCATCCGGTGTCTAACTCTGATGCCATTTGTAACGACCCAGGCTCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTTCTTTTCGGGCTTCCCCTCAAGGCATTAAAATGCGTCTGCTAGGGGAAGGTTTCCACACCCTTATAAAGGGTGTTTTGTTCTCCTCCCCAACCAATGTGGGACATCACAATTGTTTATAGATGAACATGTTTGGTTGTAACGTAGCAGGCTCGTTTTATGGCATTTTGAATATGGTATAGCTTGAGTTCCTTCTTCATACTGAATTGTGATGAAAACTACATTATTTGTGTTCAATGATTGTTCTATATAATTCTTGAATATGGAAACAAATAAGGTCTATGATTAATGATTTCACTGTACTAACATTTTTAGTTCCAATTAATAGAAGTTCTTGAGGGAGATGGAGCAGAAGCACATGAAGGAGACTTGGTGGAGTTCAATTATGTCTGCAGGCGTTCAAATGGATACTTCGTTCATAGGTAATGTATTTGTCGGAAGCATTCCTTGTAAGTGTGTGGAAACCTCTCTCTAGCAGACGCGTATTAAAAACCTTGAGGCAAAGCCCGAAAAGGAAAGTCCAAAGAGGACAATATCTACTAGCGGTGGGTTTGAACTGATGCAAATAGTATCAGAGCTAGACACCGAGCGGTGTGCCAGCAAGGACGTTGGGCCCCCAAGGGGGTGGGGATTGTGAGATTCTACATTGGTTGGAGAGGGGAATGAAACATTTCTTATAAGAGTGTGAAAACCTCTCTCTAGCAGACCCGTTTTAAAAACTTTGAGGCGATACTCGAAAAGGAAAGTCCAAAGAGGACAATATCGGTTAGCGGTGGGCTTGAGCTGTTACAAATGGTATCAGAGCCAAACACCGAGCGGTGTGCCAACATGGACATTGGCCCCAAGGGGGGTGGATTGTGAGATCCCACATTGATTGGAGATGGGAACGAAACATTTCTTATAAGGGTGTGGAAACCTCTCCCTATCAGACACGTTTTAAAAACCTTGAGGTGAAACCCAAAAAGGAAAGTGGAAAGAGGACAATATCTGCTAGCGGTGGGCTTGAGCTGTTACAAATGGTATCAGAGCTAGACACCAACTGGTATGTCAGTGGGGACACTGTGTCCCCAAAAGGGGTAGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAACATTTCTTATAAGGGTGTGGAAACCTCTCTCTAACAGACGCGTTTTAAAAACTTCGAGGGGAAGGCCGAAAGGAAGTTACAATGTAATCCCTAAAGTACAAGGACTAAATCATTCCCATTGCCTCTGTTATCATATTCACAGCACGGTAGATCAATTCAGTGGAGAGAGCACACCAGTAATCCTGCCTTTGAAAGAAAACCAGGTAATCTCTTCTTTTACATCGGTTCTTCAAGAAAACTATGGGGGCGATAAACTTTCGAGAATTTTGTATAGATATTAATTATGGTCGTTCTATTTTTCGATGTGCAATGATCTGTTTACGAGTGTGTAATTGTCGATAGCGGATATGCTTGTTGTCGATAGCGGATAGCTTCAGTTTATGCAGCCTATCACTAGAACTTTGCTGGTTTTTGGAAGATCCTCTGTTAGTTAGCTTGTATAATCTTCTCTTTTTAAAAACGCTTAGTTTGCTCGATCAGCTTTCGAGTTTTGTATCATTCAATGATTGGATCAGCTTTCGAGTTTTTGGCGTTTATTACTGATGATATTTGTTTCTTACAGATAATAGAGGGCTTGAAAGAGGTTCTGGTTGGCATGAGAGTTGGAGGTATTGTATGGATATTCAATCATCTTTACTCAGTTTGTTCTTATGCTTATTTACCCTTAGCCAATCAAGCTGTTCATGGCTTTTATTATGCAGAAACCTCTTCAACTTCTTTGGATTAGCCTTGTATTTTAGGTTTCTATTGTCTTAACTTCTACCTTTTATATCGCTTCGTTTGCTTCACGACTTACGGCTGAAATAGGAAACGAGGAACATAAACGTTACTGGATCACCTTTAATCTTGCACATCTGTTAATGGGATATTTCTCATATGTGAGATCCCACATCGGTTGGAGTGAGAAATGAAGCATTCCTTATAAGGGTGTGGAAACCTTTGCCTAACAGACGCATCTTAAAACCGTGAGGCTAATGGCAATACGTAATGGGCCAAAATGGACAATATCTGCTAGGCGTGGGCTTGGGTTGTTACAAATAGTGTTAGAGTCATACACGGGGCAGTGTGTTAGTGAGGACGCTGGGCCCCCAAGAGGGTTAATTGTGAGATCTCACATCGATTGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAAGCCTCTACCTAGTAAGAGTGTTTTAAAACTGTGAGGCTAACGATGGTACGTAACGGGCCAAAATGGACATATCTGCCAGCGGTGGGCTTGGGCTGTTACAAATGGTATCAGAGTCAGATATCGGGCAATGTGCCAGCGAGGACACGTTAGGCCCCTAAGGGGGGTGGATTGTGAGATCCCACATCAGTTGGAGAGGAGAACGAAGCATTCTTATGTGGAAACCTCTGCCTAATAGACACGTTTTAAAACCGTCAAGGAGGTCCTTTTCTTTCTCCAGACCGATGACTCGCTTGGCTGTATGGGCAGGTTCTCCCTCGCTGCTGCGTTCTGTTAGGCTATGGATTATAGAAACAAATGTAGTTGAATGAGACAGCAGGCAGGTTACACGTTCCACTGTGCCGAGATATGAGGTGCAAGTGGTGATGATCACCCCAGGGTATGCGCGGGAGCCCTTGACAGGCACTCCAGGACCTGCCAACGGTCACGAGGCTATACGTAACGGGGCTAAAACGGACAATATTTGTTAACGGTGGGCTTGTGGTGTTACAAATGGTATCAGAGTCAGATATCGGGCGGTGTGCCAGTGTAGACATAGAGCCCCAAAAGGGGATAGATTGTGAGATCCTACATCGGTTGGAGAGGGGAACGAAACATTCCTTATAAGGATGTGGAAACCTTTGCTTAGTAAACACGTTTTAAAACCGTGAACTTGACGGCGATACGTAACGGGTCAAAACGGATATATCTGCTAGCGGTGGGCTTGGGCTGTTACAAATGGTATCAAAGTCAAACATCGGTCAGTGTGCCAACAAGGACACGTTAGGCCCCCAATGGGGGTGGATTGTGAGATCTCACATCAGTTGGAGAGGGGAATGAAGCATTCCTTATAAGAATGTGGAAACCTCTACCTAGTAGACACGTTTTAAAACCGTGAGGCTGACGGCGATACATAACGGGCTAAAACGGACAATATTTATTAACGGTGGGCTTGTGGTGTTACAAATGGTATCAGAGTCAGACACCGGACGGTGTGCCAGTGTAGACACAGAGCCCACAAAGTGGGTGGATTGTGAAATCCTACATCGGTTGGAGAGGGGAACGAAACATTCCTTATAAGGGTGTGGAAACCTTTGCCTAACAGACACATTTTAAAACTGTGAACCTGATAGCAATACGTTTATTATTTGTTATCAGGAAAAAGAAGAGCACTTATCCCTCCGTCAGTGGGTTACATAAATGAGAATTTGAACCCAATTCCTGAAGAGGTAAAGCAAAAAAGTTCTTTCTCTAATCAGCATTAACATTATAGATTATCCATCCTAATCACTTGTTTTGGTCATATTATTTCTTAAGCATGACAACGTTGGTCGATAAAATTAAGTTCGCTTTGTTGCAGTTTGGTCCTCGACGTAGTCTTTTATCGCATCGGAACGAGCCCTTGATATTTGAGGTGCAACTTTTGAAAGTTCAATGAGTATCATTCTCCGTCGATATTGACTTAAACCCTTGTATATTCAATGTTGATATTTGAAAATATGAGTAGAAAGTTCTTTCATAGCGGGCTCACGTCATCGTTATGTGGTGTGTCCCTTGCCATTATTCAGCCTATGACCCTTCGACTGTAATCAGAGGCCGAACGAATGTGTAATTGCTATTAAAAGATGGAAAGTCAGAAGACAAATGTTGATATTTTCTTTGTTGTATCTGAAAAGAACATACTCTCGATGATCATAGCCTTGACTTTCTATGTTATTAGTACAATACAGGAGCGTTCTAACAGGCTTGCTACCTTATTATTATTCCGAACTTGACACCCATCAAATCATTGGCCCGGGGTGCTCCTGTTGGCCTAATTACACGTGTT

mRNA sequence

CCATAGAATCCTCTCCTTTTCTTCCTCATCCACTTCGTTTCAACTTATCCATTAACGTCATCGTCTTCGCAACTTTTCAGGCTGTGCCATGGGAGTTCTCTCGTTCTGGAGCTTGTTTCGCTCTCCTTCCGCCGTCAAATTTTCTAGTTTCCACAAAGCCATTTGCATGGCTGATGAAGTATCCATATCCAAGCATCATATGGTCAATCACTTAGACATTTTTTCTGGCAAACGATTTCCAAGAAGGCTGTTCTCGCAGTTCATTGGTTCGTATCCGATCTTGTTATATGCAAATCCTAGTTTCGGTGCACCGATGATGGACGTGCAAGAACCGGAAATAGTTCGGTATATAATAGAGGGCTTGAAAGAGGTTCTGGTTGGCATGAGAGTTGGAGGTATTTTTGGTCCTCGACGTAGTCTTTTATCGCATCGGAACGAGCCCTTGATATTTGAGGTGCAACTTTTGAAAGTTCAATGAGTATCATTCTCCGTCGATATTGACTTAAACCCTTGTATATTCAATGTTGATATTTGAAAATATGAGTAGAAAGTTCTTTCATAGCGGGCTCACGTCATCGTTATGTGGTGTGTCCCTTGCCATTATTCAGCCTATGACCCTTCGACTGTAATCAGAGGCCGAACGAATGTGTAATTGCTATTAAAAGATGGAAAGTCAGAAGACAAATGTTGATATTTTCTTTGTTGTATCTGAAAAGAACATACTCTCGATGATCATAGCCTTGACTTTCTATGTTATTAGTACAATACAGGAGCGTTCTAACAGGCTTGCTACCTTATTATTATTCCGAACTTGACACCCATCAAATCATTGGCCCGGGGTGCTCCTGTTGGCCTAATTACACGTGTT

Coding sequence (CDS)

ATGGGAGTTCTCTCGTTCTGGAGCTTGTTTCGCTCTCCTTCCGCCGTCAAATTTTCTAGTTTCCACAAAGCCATTTGCATGGCTGATGAAGTATCCATATCCAAGCATCATATGGTCAATCACTTAGACATTTTTTCTGGCAAACGATTTCCAAGAAGGCTGTTCTCGCAGTTCATTGGTTCGTATCCGATCTTGTTATATGCAAATCCTAGTTTCGGTGCACCGATGATGGACGTGCAAGAACCGGAAATAGTTCGGTATATAATAGAGGGCTTGAAAGAGGTTCTGGTTGGCATGAGAGTTGGAGGTATTTTTGGTCCTCGACGTAGTCTTTTATCGCATCGGAACGAGCCCTTGATATTTGAGGTGCAACTTTTGAAAGTTCAATGA

Protein sequence

MGVLSFWSLFRSPSAVKFSSFHKAICMADEVSISKHHMVNHLDIFSGKRFPRRLFSQFIGSYPILLYANPSFGAPMMDVQEPEIVRYIIEGLKEVLVGMRVGGIFGPRRSLLSHRNEPLIFEVQLLKVQ
Homology
[Close]
BLAST of Carg24741 vs. NCBI nr
Match: KAG7024986.1 (Peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 261.9 bits (668), Expect = 2.9e-66
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0 

Query: 1   MGVLSFWSLFRSPSAVKFSSFHKAICMADEVSISKHHMVNHLDIFSGKRFPRRLFSQFIG 60
           MGVLSFWSLFRSPSAVKFSSFHKAICMADEVSISKHHMVNHLDIFSGKRFPRRLFSQFIG
Sbjct: 1   MGVLSFWSLFRSPSAVKFSSFHKAICMADEVSISKHHMVNHLDIFSGKRFPRRLFSQFIG 60

Query: 61  SYPILLYANPSFGAPMMDVQEPEIVRYIIEGLKEVLVGMRVGGIFGPRRSLLSHRNEPLI 120
           SYPILLYANPSFGAPMMDVQEPEIVRYIIEGLKEVLVGMRVGGIFGPRRSLLSHRNEPLI
Sbjct: 61  SYPILLYANPSFGAPMMDVQEPEIVRYIIEGLKEVLVGMRVGGIFGPRRSLLSHRNEPLI 120

Query: 121 FEVQLLKVQ 130
           FEVQLLKVQ
Sbjct: 121 FEVQLLKVQ 129

[Close]
BLAST of Carg24741 vs. NCBI nr
Match: XP_022937354.1 (peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic isoform X5 [Cucurbita moschata])

HSP 1 Score: 221.5 bits (563), Expect = 4.3e-54
Identity = 124/184 (67.39%), Postives = 125/184 (67.93%), Query Frame = 0 

Query: 1   MGVLSFWSLFRSPSAVKFSSFHKAICMADEVSISKHHMVNHLDIFSGKRFPRRLFSQFIG 60
           MGVLS WSLFRSP AVKFSSFHKAICMADEVSISKHHMVNHLDIFSGKRFPRRLFSQFIG
Sbjct: 1   MGVLSLWSLFRSPCAVKFSSFHKAICMADEVSISKHHMVNHLDIFSGKRFPRRLFSQFIG 60

Query: 61  SYPILLYANPSFGAPMMDVQEPEIVRY--------------------------------- 120
           SYPILLYANPSF APMMDVQEPEIVR+                                 
Sbjct: 61  SYPILLYANPSFSAPMMDVQEPEIVRFQDAKARQWSSDSSTVDQFSGESTPVILPLKENQ 120

Query: 121 IIEGLKEVLVGMRVGG----------------------IFGPRRSLLSHRNEPLIFEVQL 130
           IIEGLKEVLVGMRVGG                       FGPRRSLLSHRNEPLIFEVQL
Sbjct: 121 IIEGLKEVLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEPLIFEVQL 180

[Close]
BLAST of Carg24741 vs. NCBI nr
Match: XP_023534865.1 (peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 215.7 bits (548), Expect = 2.3e-52
Identity = 121/184 (65.76%), Postives = 124/184 (67.39%), Query Frame = 0 

Query: 1   MGVLSFWSLFRSPSAVKFSSFHKAICMADEVSISKHHMVNHLDIFSGKRFPRRLFSQFIG 60
           MGVLSFWS FRSPSAVKFSSFHK ICMADEVSISKHH VNHLDIFS KRFPRRLF+QFIG
Sbjct: 1   MGVLSFWSSFRSPSAVKFSSFHKTICMADEVSISKHHTVNHLDIFSVKRFPRRLFAQFIG 60

Query: 61  SYPILLYANPSFGAPMMDVQEPEIVRY--------------------------------- 120
           SYPILLYANPSFGAPM+DVQEPEIVR+                                 
Sbjct: 61  SYPILLYANPSFGAPMIDVQEPEIVRFQDAKARQWSSDSSTIDQFSGESTPVILPLKQNQ 120

Query: 121 IIEGLKEVLVGMRVGG----------------------IFGPRRSLLSHRNEPLIFEVQL 130
           IIEGLKEVLVGMRVGG                       FGPRRSLLSHRNEPLIFEVQL
Sbjct: 121 IIEGLKEVLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEPLIFEVQL 180

[Close]
BLAST of Carg24741 vs. NCBI nr
Match: XP_022976015.1 (peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic isoform X4 [Cucurbita maxima])

HSP 1 Score: 214.2 bits (544), Expect = 6.8e-52
Identity = 121/184 (65.76%), Postives = 123/184 (66.85%), Query Frame = 0 

Query: 1   MGVLSFWSLFRSPSAVKFSSFHKAICMADEVSISKHHMVNHLDIFSGKRFPRRLFSQFIG 60
           MGVLSFWSLFRSPSAVKF SFHK I MADEVSISKHHMVNH+D FS KRFPRRLFSQFIG
Sbjct: 1   MGVLSFWSLFRSPSAVKFPSFHKTIYMADEVSISKHHMVNHVDFFSVKRFPRRLFSQFIG 60

Query: 61  SYPILLYANPSFGAPMMDVQEPEIVRY--------------------------------- 120
           SYPILLYANPSFGAPMMDVQEPEIVR+                                 
Sbjct: 61  SYPILLYANPSFGAPMMDVQEPEIVRFQDAKARQWSSDSSTVDQFSGESTPVILPLKENQ 120

Query: 121 IIEGLKEVLVGMRVGG----------------------IFGPRRSLLSHRNEPLIFEVQL 130
           IIEGLKEVLVGMRVGG                       FGPRRSLLSHRNEPLIFEVQL
Sbjct: 121 IIEGLKEVLVGMRVGGKRRALIPPSMGYINENLNPIPEEFGPRRSLLSHRNEPLIFEVQL 180

[Close]
BLAST of Carg24741 vs. NCBI nr
Match: KAG6592115.1 (Peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 213.4 bits (542), Expect = 1.2e-51
Identity = 126/213 (59.15%), Postives = 126/213 (59.15%), Query Frame = 0 

Query: 1   MGVLSFWSLFRSPSAVKFSSFHKAICMADEVSISKHHMVNHLDIFSGKRFPRRLFSQFIG 60
           MGVLSFWSLFRSP AVKFSSFHKAICMADEVSISKHHMVNHLDIFSGKRFPRRLFSQFIG
Sbjct: 47  MGVLSFWSLFRSPCAVKFSSFHKAICMADEVSISKHHMVNHLDIFSGKRFPRRLFSQFIG 106

Query: 61  SYPILLYANPSFGAPMMDVQEPEIVR---------------------------------- 120
           SYPILLYANPSFGAPMMDVQEPEIVR                                  
Sbjct: 107 SYPILLYANPSFGAPMMDVQEPEIVRTLKLDSGVRIQEVLEGDGAEAHEGDLVEFNYVCR 166

Query: 121 ----------------------------YIIEGLKEVLVGMRVGG--------------- 130
                                        IIEGLKEVLVGMRVGG               
Sbjct: 167 RSNGYFVHSTVDQFSGESTPVILPLKENQIIEGLKEVLVGMRVGGKRRALIPPSVGYINE 226

[Close]
BLAST of Carg24741 vs. ExPASy Swiss-Prot
Match: Q944B0 (Peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP16-1 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 7.4e-09
Identity = 34/63 (53.97%), Postives = 38/63 (60.32%), Query Frame = 0 

Query: 88  IIEGLKEVLVGMRVGG----------------------IFGPRRSLLSHRNEPLIFEVQL 129
           +IEGLKEVLVGM+ GG                       FGPRRSLLSH NEPL+FE+QL
Sbjct: 144 VIEGLKEVLVGMKAGGKRRALIPPSVGYINETLKPIPEEFGPRRSLLSHANEPLVFEIQL 203

[Close]
BLAST of Carg24741 vs. ExPASy TrEMBL
Match: A0A6J1FAY2 (Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111443666 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.1e-54
Identity = 124/184 (67.39%), Postives = 125/184 (67.93%), Query Frame = 0 

Query: 1   MGVLSFWSLFRSPSAVKFSSFHKAICMADEVSISKHHMVNHLDIFSGKRFPRRLFSQFIG 60
           MGVLS WSLFRSP AVKFSSFHKAICMADEVSISKHHMVNHLDIFSGKRFPRRLFSQFIG
Sbjct: 1   MGVLSLWSLFRSPCAVKFSSFHKAICMADEVSISKHHMVNHLDIFSGKRFPRRLFSQFIG 60

Query: 61  SYPILLYANPSFGAPMMDVQEPEIVRY--------------------------------- 120
           SYPILLYANPSF APMMDVQEPEIVR+                                 
Sbjct: 61  SYPILLYANPSFSAPMMDVQEPEIVRFQDAKARQWSSDSSTVDQFSGESTPVILPLKENQ 120

Query: 121 IIEGLKEVLVGMRVGG----------------------IFGPRRSLLSHRNEPLIFEVQL 130
           IIEGLKEVLVGMRVGG                       FGPRRSLLSHRNEPLIFEVQL
Sbjct: 121 IIEGLKEVLVGMRVGGKRRALIPPSVGYINENLNPIPEEFGPRRSLLSHRNEPLIFEVQL 180

[Close]
BLAST of Carg24741 vs. ExPASy TrEMBL
Match: A0A6J1IIB9 (Peptidylprolyl isomerase OS=Cucurbita maxima OX=3661 GN=LOC111476541 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.3e-52
Identity = 121/184 (65.76%), Postives = 123/184 (66.85%), Query Frame = 0 

Query: 1   MGVLSFWSLFRSPSAVKFSSFHKAICMADEVSISKHHMVNHLDIFSGKRFPRRLFSQFIG 60
           MGVLSFWSLFRSPSAVKF SFHK I MADEVSISKHHMVNH+D FS KRFPRRLFSQFIG
Sbjct: 1   MGVLSFWSLFRSPSAVKFPSFHKTIYMADEVSISKHHMVNHVDFFSVKRFPRRLFSQFIG 60

Query: 61  SYPILLYANPSFGAPMMDVQEPEIVRY--------------------------------- 120
           SYPILLYANPSFGAPMMDVQEPEIVR+                                 
Sbjct: 61  SYPILLYANPSFGAPMMDVQEPEIVRFQDAKARQWSSDSSTVDQFSGESTPVILPLKENQ 120

Query: 121 IIEGLKEVLVGMRVGG----------------------IFGPRRSLLSHRNEPLIFEVQL 130
           IIEGLKEVLVGMRVGG                       FGPRRSLLSHRNEPLIFEVQL
Sbjct: 121 IIEGLKEVLVGMRVGGKRRALIPPSMGYINENLNPIPEEFGPRRSLLSHRNEPLIFEVQL 180

[Close]
BLAST of Carg24741 vs. ExPASy TrEMBL
Match: A0A6J1FGD1 (Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111443666 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.4e-50
Identity = 124/213 (58.22%), Postives = 124/213 (58.22%), Query Frame = 0 

Query: 1   MGVLSFWSLFRSPSAVKFSSFHKAICMADEVSISKHHMVNHLDIFSGKRFPRRLFSQFIG 60
           MGVLS WSLFRSP AVKFSSFHKAICMADEVSISKHHMVNHLDIFSGKRFPRRLFSQFIG
Sbjct: 1   MGVLSLWSLFRSPCAVKFSSFHKAICMADEVSISKHHMVNHLDIFSGKRFPRRLFSQFIG 60

Query: 61  SYPILLYANPSFGAPMMDVQEPEIVR---------------------------------- 120
           SYPILLYANPSF APMMDVQEPEIVR                                  
Sbjct: 61  SYPILLYANPSFSAPMMDVQEPEIVRTLKLDSGVRIQEVLEGDGAEAHEGDLVEFNYVCR 120

Query: 121 ----------------------------YIIEGLKEVLVGMRVGG--------------- 130
                                        IIEGLKEVLVGMRVGG               
Sbjct: 121 RSNGYFVHSTVDQFSGESTPVILPLKENQIIEGLKEVLVGMRVGGKRRALIPPSVGYINE 180

[Close]
BLAST of Carg24741 vs. ExPASy TrEMBL
Match: A0A6J1IFQ8 (Peptidylprolyl isomerase OS=Cucurbita maxima OX=3661 GN=LOC111476541 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.2e-48
Identity = 121/213 (56.81%), Postives = 122/213 (57.28%), Query Frame = 0 

Query: 1   MGVLSFWSLFRSPSAVKFSSFHKAICMADEVSISKHHMVNHLDIFSGKRFPRRLFSQFIG 60
           MGVLSFWSLFRSPSAVKF SFHK I MADEVSISKHHMVNH+D FS KRFPRRLFSQFIG
Sbjct: 1   MGVLSFWSLFRSPSAVKFPSFHKTIYMADEVSISKHHMVNHVDFFSVKRFPRRLFSQFIG 60

Query: 61  SYPILLYANPSFGAPMMDVQEPEIVR---------------------------------- 120
           SYPILLYANPSFGAPMMDVQEPEIVR                                  
Sbjct: 61  SYPILLYANPSFGAPMMDVQEPEIVRTLKLDSGVRIQEVFEGDGAEAHEGDLVEFNYVCR 120

Query: 121 ----------------------------YIIEGLKEVLVGMRVGG--------------- 130
                                        IIEGLKEVLVGMRVGG               
Sbjct: 121 RSNGYFVHSTVDQFSGESTPVILPLKENQIIEGLKEVLVGMRVGGKRRALIPPSMGYINE 180

[Close]
BLAST of Carg24741 vs. ExPASy TrEMBL
Match: A0A6J1FA42 (Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111443666 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.0e-40
Identity = 107/194 (55.15%), Postives = 107/194 (55.15%), Query Frame = 0 

Query: 20  SFHKAICMADEVSISKHHMVNHLDIFSGKRFPRRLFSQFIGSYPILLYANPSFGAPMMDV 79
           SFHKAICMADEVSISKHHMVNHLDIFSGKRFPRRLFSQFIGSYPILLYANPSF APMMDV
Sbjct: 7   SFHKAICMADEVSISKHHMVNHLDIFSGKRFPRRLFSQFIGSYPILLYANPSFSAPMMDV 66

Query: 80  QEPEIVR----------------------------------------------------- 130
           QEPEIVR                                                     
Sbjct: 67  QEPEIVRTLKLDSGVRIQEVLEGDGAEAHEGDLVEFNYVCRRSNGYFVHSTVDQFSGEST 126

[Close]
BLAST of Carg24741 vs. TAIR 10
Match: AT4G26555.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein )

HSP 1 Score: 61.6 bits (148), Expect = 5.3e-10
Identity = 34/63 (53.97%), Postives = 38/63 (60.32%), Query Frame = 0 

Query: 88  IIEGLKEVLVGMRVGG----------------------IFGPRRSLLSHRNEPLIFEVQL 129
           +IEGLKEVLVGM+ GG                       FGPRRSLLSH NEPL+FE+QL
Sbjct: 144 VIEGLKEVLVGMKAGGKRRALIPPSVGYINETLKPIPEEFGPRRSLLSHANEPLVFEIQL 203

The following BLAST results are available for this feature:
BLAST of Carg24741 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7024986.12.9e-66100.00Peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic [Cucurbita argyrospe... [more]
XP_022937354.14.3e-5467.39peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic isoform X5 [Cucurbit... [more]
XP_023534865.12.3e-5265.76peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic isoform X4 [Cucurbit... [more]
XP_022976015.16.8e-5265.76peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic isoform X4 [Cucurbit... [more]
KAG6592115.11.2e-5159.15Peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic, partial [Cucurbita ... [more]
BLAST of Carg24741 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q944B07.4e-0953.97Peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic OS=Arabidopsis thali... [more]
BLAST of Carg24741 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FAY22.1e-5467.39Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111443666 PE=4 SV=1[more]
A0A6J1IIB93.3e-5265.76Peptidylprolyl isomerase OS=Cucurbita maxima OX=3661 GN=LOC111476541 PE=4 SV=1[more]
A0A6J1FGD11.4e-5058.22Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111443666 PE=4 SV=1[more]
A0A6J1IFQ82.2e-4856.81Peptidylprolyl isomerase OS=Cucurbita maxima OX=3661 GN=LOC111476541 PE=4 SV=1[more]
A0A6J1FA421.0e-4055.15Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111443666 PE=4 SV=1[more]
BLAST of Carg24741 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G26555.15.3e-1053.97FKBP-like peptidyl-prolyl cis-trans isomerase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR43811FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPAcoord: 105..128
NoneNo IPR availablePANTHERPTHR43811:SF26PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-1, CHLOROPLASTICcoord: 105..128
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 87..128

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24741-RACarg24741-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000413 protein peptidyl-prolyl isomerization
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity