Carg24731 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGAGTCGTCCAGAAAATGGATAACGCATTACGGCAGCTCCCACGACATACTCCTTGTTGGAGAAGGCAATTTCTCCTTCTCAGCTTGCTTGGCCTCCGCCTTCGGCACTGCTACCAACGTGGTTGCCACTTCTCTCGACTCCGAAGGTACTTTATTCTTGAACAATATCCTTCCTCGACTTTTAAAAAACCATCATTTTGATCGATGTTATGTTGCTGTTGCTGTTTCTTTACCTTAAATTCGTTTTGCTTAATCTTCATGAAGAATTTATTAAGCTTAAAATCATTTTTGTACTTAATTTGTTATTATATATATTCGATTTTTTAAAGTTCTAGAGATCAAAGTAGTCATTTGAAGAATGAAATATTCTTTATAAAGGTGTGAAAATCTCTCTCTAGCATAAGTGTTTTAAAAACTTTGAGAGAAACCCTGAAAGACAAAGTCCCAAGATAATGGTAGTTTAAATCAAAATAAAATGTACTTCCAGAAAGAGAAAGGCACGAGCGTGGACCGAATTGAGTGCAAAAGGGTGGACCAAATTGAGTCCCTTTCATCCGGTGGTTAGGATATTGTCTTTTCATGTCGAAGAGACGGGTTCGATTCCCATAAGGGATAGGTACTCATTCCTGGCCGCTTTCTCTTAGTGTGAATTTCTGAGTGATCGCTTGATATCTGGCTAGAAAATGTGGTCTGGAAGCTTCCTCTCTTCCAGCAAGCAAGATGAGATCACCACTTTTCTCAGTAATGGACTTCCTTTCATCCTTCCTTACGTAGTCTTAGATGTCCTTTCATAGATTCTTGAACTTTTGATAGACGAAATCTCTATGCATGTGTGATTTTTTTCCACATCTCTTTTGGCCTAAACAATAAGATTTAGTTACCCTAACAACCAATATAGTTGAAGACCTAACAACATAGTTGTGATAATTTCTTCAACACAGTTCGCGGTTGATCAGTCTATTCTTTTTTTCTTTGGAAGATGGTCAAGGTAGCTAAGCCACTGCACTAAATGCGCATGTAGTCGTAGTAGTTGGCTCAGAATGCCTCTGTACTAAAAGACTACTTCGGAGGGGTCTTTTTTTCTGCAACAAATTCTCCGGTTGGAAAGATTTGAGTGTTATTCTTGTCCCGCTTAATGACCAACGATCAGATTTATAATTGCCCTTAATTACCAAAGATTAATAAGACTTTTTGGAGACCAAAATATGATTTAATCTTAGTAGTTGCATGTTTTTTAAGGTTGTCCTAATTCGGTGTCGTAAAGTCTAACCTTTTTGTGTTGGTTTTGGTGTTTGTTTGTTTGTAAATAATTCAATAAATTTTTGCATGTTTTTTAAGGTTGTCCTAATTCGGTGTCGTAAAATCTAACCTTCTTGTGTTGGTTTTGGTTTTGGTGTTTGTTTGTTTGTAAATAATTCAATAAATTTTGAAAAGAGACATTGTTGAGAAAGTACGGCTCGGACATTAAGACAACCTTGGAAGAGCTGAAGGAGCTGGGTTGCAGTGTGATGCATGGAGTGGACGTAACGACAATGAGCCAACACCCACTTCTCTGTCACACCTTGTTTGATCGCATTGTCTTCAATTTTCCTCATGCTGGTTTTCAATACTCAGAACATGAAACCAGACAAATCAAGTAAGTACATATTCCCAGAAAATTATTGTTTTTTTTTTCCTGATAATTATTGTTTTTTGCAAATGGGTTGACTTAAGGTATGAGAAAGTGAGACGGATCTCCTTAAGTTATATAGGCTTGGGAGATCGTTTTCGAACTAGTTTAGCCTTTAAACCTTTCTGCTCATTGTCATAGGTTCATAAAATTTCAACATTGTTTAGTAAAAATTCTTAATCAACAGTCAACTTTGCCGTCGTTTTCAAACTAGTTTAGTCTTTGAATTTTCCTGTTTATTGTCTCAGGTTCATAAAATTAGAACGTTGTTGAGAAAGAATTCTTAATAAGTCTTCAAACATTTAACTTTCCGAGTTTTCAAACCAATTTAGCCTTTTTGAACTTTCCTATTTATCGTCCACATGTTCATAAAATTTCAATGTTTAGTAGGAATTCTTAATAAGTCTTCAAACGGTCAATTTTGTGATTGTTTTTAAACAAGTTTAGTCTTTGAACTTTCCTGTTTATTGTCACATGTTCATATAATTTCATCGTTGTTTCGTAGGAATCGTAGGAATTCTTAATAAGTCTTTAAACGATCAACTTTGCGTCTAAACGAGTTTTGACATATTTGATCTTTTAAGTTTAAGAACTTGTTTTACAAGAATTCTAAACTGTTACAAACCACGGACTCTCCACACACAATAGTATGATATTATTTACTTTTTTGCTTCCCCAAAAAGTCTTATACCAATGAAGATTTATTCTTTTCTTATAAACTCATAATCATCCCCTTAATTACTCGATGTTGGGCTCCTCTTCCAACCGTTCTCGACACACAAATCACTAAATCTTAAAAGTATCTAGCAAGTCCTTAAGCTTTCTATAACATTTATACCTGATTCGTGCCTCGGTTTTTCTTTTAACAGACTCCACCAGAATCTAGTGAGAAGATTTCTGAGAAATGCAAAAGAACTATTGGCAGAAAATGGGGACATTCACATAACCCACAAGATTTCATTTCCTTACAGTGAGTGGGAGATTGAGGAAGTTGCAGAAGAAGAGGACTTATTTTTAAGAGAGTTAGTAGAGTTCAATATAGGGGATTATCCAGGTTATGTCAATAAGAAAGGCAGTGGGCCAAACAGCAACCTTACCTTCCCTGTTGGACTATGCAGCACTTTCAAGTTTGTTAAAACACTGTCCAAGAAAATGAGGGAGAAGAGGTTGGCCAAGGCTGCTGAATTTTCCCAACTCATGTTTCATCTATCAGTTTGA ATGGGAGAGTCGTCCAGAAAATGGATAACGCATTACGGCAGCTCCCACGACATACTCCTTGTTGGAGAAGGCAATTTCTCCTTCTCAGCTTGCTTGGCCTCCGCCTTCGGCACTGCTACCAACGTGGTTGCCACTTCTCTCGACTCCGAAGAGACATTGTTGAGAAAGTACGGCTCGGACATTAAGACAACCTTGGAAGAGCTGAAGGAGCTGGGTTGCAGTGTGATGCATGGAGTGGACGTAACGACAATGAGCCAACACCCACTTCTCTGTCACACCTTGTTTGATCGCATTGTCTTCAATTTTCCTCATGCTGGTTTTCAATACTCAGAACATGAAACCAGACAAATCAAACTCCACCAGAATCTAGTGAGAAGATTTCTGAGAAATGCAAAAGAACTATTGGCAGAAAATGGGGACATTCACATAACCCACAAGATTTCATTTCCTTACAGTGAGTGGGAGATTGAGGAAGTTGCAGAAGAAGAGGACTTATTTTTAAGAGAGTTAGTAGAGTTCAATATAGGGGATTATCCAGGTTATGTCAATAAGAAAGGCAGTGGGCCAAACAGCAACCTTACCTTCCCTGTTGGACTATGCAGCACTTTCAAGTTTGTTAAAACACTGTCCAAGAAAATGAGGGAGAAGAGGTTGGCCAAGGCTGCTGAATTTTCCCAACTCATGTTTCATCTATCAGTTTGA ATGGGAGAGTCGTCCAGAAAATGGATAACGCATTACGGCAGCTCCCACGACATACTCCTTGTTGGAGAAGGCAATTTCTCCTTCTCAGCTTGCTTGGCCTCCGCCTTCGGCACTGCTACCAACGTGGTTGCCACTTCTCTCGACTCCGAAGAGACATTGTTGAGAAAGTACGGCTCGGACATTAAGACAACCTTGGAAGAGCTGAAGGAGCTGGGTTGCAGTGTGATGCATGGAGTGGACGTAACGACAATGAGCCAACACCCACTTCTCTGTCACACCTTGTTTGATCGCATTGTCTTCAATTTTCCTCATGCTGGTTTTCAATACTCAGAACATGAAACCAGACAAATCAAACTCCACCAGAATCTAGTGAGAAGATTTCTGAGAAATGCAAAAGAACTATTGGCAGAAAATGGGGACATTCACATAACCCACAAGATTTCATTTCCTTACAGTGAGTGGGAGATTGAGGAAGTTGCAGAAGAAGAGGACTTATTTTTAAGAGAGTTAGTAGAGTTCAATATAGGGGATTATCCAGGTTATGTCAATAAGAAAGGCAGTGGGCCAAACAGCAACCTTACCTTCCCTGTTGGACTATGCAGCACTTTCAAGTTTGTTAAAACACTGTCCAAGAAAATGAGGGAGAAGAGGTTGGCCAAGGCTGCTGAATTTTCCCAACTCATGTTTCATCTATCAGTTTGA MGESSRKWITHYGSSHDILLVGEGNFSFSACLASAFGTATNVVATSLDSEETLLRKYGSDIKTTLEELKELGCSVMHGVDVTTMSQHPLLCHTLFDRIVFNFPHAGFQYSEHETRQIKLHQNLVRRFLRNAKELLAENGDIHITHKISFPYSEWEIEEVAEEEDLFLRELVEFNIGDYPGYVNKKGSGPNSNLTFPVGLCSTFKFVKTLSKKMREKRLAKAAEFSQLMFHLSV Homology
BLAST of Carg24731 vs. NCBI nr
Match: KAG7024996.1 (hypothetical protein SDJN02_13816, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 470.3 bits (1209), Expect = 9.6e-129 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
BLAST of Carg24731 vs. NCBI nr
Match: XP_022936898.1 (uncharacterized protein At4g26485 isoform X1 [Cucurbita moschata]) HSP 1 Score: 411.8 bits (1057), Expect = 4.0e-111 Identity = 206/227 (90.75%), Postives = 213/227 (93.83%), Query Frame = 0
BLAST of Carg24731 vs. NCBI nr
Match: XP_022976038.1 (uncharacterized protein At4g26485 isoform X1 [Cucurbita maxima]) HSP 1 Score: 385.2 bits (988), Expect = 4.0e-103 Identity = 196/233 (84.12%), Postives = 209/233 (89.70%), Query Frame = 0
BLAST of Carg24731 vs. NCBI nr
Match: KAG6592122.1 (hypothetical protein SDJN03_14468, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 349.0 bits (894), Expect = 3.2e-92 Identity = 174/186 (93.55%), Postives = 177/186 (95.16%), Query Frame = 0
BLAST of Carg24731 vs. NCBI nr
Match: XP_022139694.1 (uncharacterized protein At4g26485-like [Momordica charantia]) HSP 1 Score: 303.1 bits (775), Expect = 2.0e-78 Identity = 152/218 (69.72%), Postives = 175/218 (80.28%), Query Frame = 0
BLAST of Carg24731 vs. ExPASy Swiss-Prot
Match: P0C8L4 (Uncharacterized protein At4g26485 OS=Arabidopsis thaliana OX=3702 GN=At4g26485 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 1.8e-53 Identity = 111/209 (53.11%), Postives = 143/209 (68.42%), Query Frame = 0
BLAST of Carg24731 vs. ExPASy Swiss-Prot
Match: F4I1X0 (Heavy metal-associated isoprenylated plant protein 41 OS=Arabidopsis thaliana OX=3702 GN=HIPP41 PE=3 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 2.7e-49 Identity = 96/198 (48.48%), Postives = 132/198 (66.67%), Query Frame = 0
BLAST of Carg24731 vs. ExPASy Swiss-Prot
Match: O94480 (25S rRNA (uridine-N(3))-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=bmt5 PE=3 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.0e-16 Identity = 58/185 (31.35%), Postives = 100/185 (54.05%), Query Frame = 0
BLAST of Carg24731 vs. ExPASy Swiss-Prot
Match: Q3UY23 (Ferredoxin-fold anticodon-binding domain-containing protein 1 homolog OS=Mus musculus OX=10090 GN=Fdxacb1 PE=2 SV=2) HSP 1 Score: 71.6 bits (174), Expect = 1.3e-11 Identity = 53/176 (30.11%), Postives = 82/176 (46.59%), Query Frame = 0
BLAST of Carg24731 vs. ExPASy Swiss-Prot
Match: Q9BRP7 (Ferredoxin-fold anticodon-binding domain-containing protein 1 OS=Homo sapiens OX=9606 GN=FDXACB1 PE=1 SV=3) HSP 1 Score: 67.8 bits (164), Expect = 1.9e-10 Identity = 52/175 (29.71%), Postives = 82/175 (46.86%), Query Frame = 0
BLAST of Carg24731 vs. ExPASy TrEMBL
Match: A0A6J1FEI5 (uncharacterized protein At4g26485 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443349 PE=4 SV=1) HSP 1 Score: 411.8 bits (1057), Expect = 2.0e-111 Identity = 206/227 (90.75%), Postives = 213/227 (93.83%), Query Frame = 0
BLAST of Carg24731 vs. ExPASy TrEMBL
Match: A0A6J1IKX9 (uncharacterized protein At4g26485 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476560 PE=4 SV=1) HSP 1 Score: 385.2 bits (988), Expect = 2.0e-103 Identity = 196/233 (84.12%), Postives = 209/233 (89.70%), Query Frame = 0
BLAST of Carg24731 vs. ExPASy TrEMBL
Match: A0A6J1CDR1 (uncharacterized protein At4g26485-like OS=Momordica charantia OX=3673 GN=LOC111010540 PE=4 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 9.8e-79 Identity = 152/218 (69.72%), Postives = 175/218 (80.28%), Query Frame = 0
BLAST of Carg24731 vs. ExPASy TrEMBL
Match: A0A6J1IME0 (uncharacterized protein At4g26485 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111476560 PE=4 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 2.0e-68 Identity = 135/147 (91.84%), Postives = 138/147 (93.88%), Query Frame = 0
BLAST of Carg24731 vs. ExPASy TrEMBL
Match: A0A6J1F9M1 (uncharacterized protein At4g26485 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443349 PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 4.6e-68 Identity = 133/146 (91.10%), Postives = 137/146 (93.84%), Query Frame = 0
BLAST of Carg24731 vs. TAIR 10
Match: AT1G55790.1 (Domain of unknown function (DUF2431) ) HSP 1 Score: 196.8 bits (499), Expect = 1.9e-50 Identity = 96/198 (48.48%), Postives = 132/198 (66.67%), Query Frame = 0
BLAST of Carg24731 vs. TAIR 10
Match: AT5G56060.1 (Domain of unknown function (DUF2431) ) HSP 1 Score: 167.5 bits (423), Expect = 1.2e-41 Identity = 94/189 (49.74%), Postives = 127/189 (67.20%), Query Frame = 0
BLAST of Carg24731 vs. TAIR 10
Match: AT5G56075.1 (Domain of unknown function (DUF2431) ) HSP 1 Score: 161.8 bits (408), Expect = 6.8e-40 Identity = 91/205 (44.39%), Postives = 132/205 (64.39%), Query Frame = 0
BLAST of Carg24731 vs. TAIR 10
Match: AT4G26485.1 (Domain of unknown function (DUF2431) ) HSP 1 Score: 152.9 bits (385), Expect = 3.1e-37 Identity = 82/171 (47.95%), Postives = 112/171 (65.50%), Query Frame = 0
BLAST of Carg24731 vs. TAIR 10
Match: AT1G55800.1 (Domain of unknown function (DUF2431) ) HSP 1 Score: 136.0 bits (341), Expect = 4.0e-32 Identity = 84/229 (36.68%), Postives = 113/229 (49.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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