Carg24697 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24697
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DNA repair protein recA homolog 1, chloroplastic
Location	Carg_Chr01: 10637573 .. 10643567 (+)
RNA-Seq Expression	Carg24697
Synteny	Carg24697

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTCACTGCTTCTCAGTTACGCTTCGCTTACCTTTGTCTATGGATTTCATTTCGAATCCACTGGCTTGCAAGACTCTCCCATGCCGGACACTGTTCCCGCCATGCGCAGCACCTTCTCGTCGCCGCCATTTCTCGCCCTTTTCACTGTCCAATACAGGCAAGCGAGTTGGAAGGCTTCGTTGCGAGTTCGATGTTAATGTTAATGGAGCTCTTTCCGGCGACTTTGATCCTCGCTCCGTCGACAGGGTACTCATGCGATTCATTTTTCTCTGAATTTGCCACCTGCAGCTTGTACTACTTTGTTTTTCTAATTTTTGGCCTGAAATGTTTGCAATGCTTTTTATTTCAGTTTTCGTGGTTTGTTTTCATTCGTGTATTGCGTTTTTCTAATCCAATTCGTGTATCAAGTTTTTTTCAATCGAGTTCGAGTATCAAGTTGGCATCCTGTTTTGTTAGGGTTGTCAGTTGTTAAATGGTGATAAATAGAAAGGGAGGCAACGTCATTACGACACAATTGGGCGCAGGGGGAGAAAAAAACATCTGCGAATCTTATATTTGACGATAATTGTTTAATGTGATTATGTTGCTTTTCCAGCACTTATCTACTTATAAGTTATTAGTTTCTCAGATATTGAAACTTTTGTGTCGTCCTAGAAAAAGGCATTGGAAGCAGCAATGAATGACATAAATAGCTCATTTGGGAAAGGAAGTGTTACACGACTCGGAAGTGCTGGAGGAGCGTTAGTGTATGTCCTTTTTGTTTATTTTATTTTTCCCGAGAAGACCGTAAAAGTTGAAAATTTTCAACTGGTCAACAGGGTTTTAATGGTTCGTTTAAGTTTTGTAGATTTACTACCGCAGTTGGCTGGTTCGAAATTTTTTTAGCAAAATTACGTTGGGAAAATTTTCATTTCTTGAAGCATCATAAGTGGCAAGTTTAATGTTAGATTTTCTTGTCAGGTTTAAATTTCTGTTATCTTCTGTCCTTACAGGGAAACTTTCCCAAGTGGCTGTTTGACGTTAGACTGCGCCTTAGGCGGCGGCCTTCCTAAAGGCAGAATTGTTGAGGTATGTTTACTTGTACTTGGAGGTTGGGGTATAAAGGTAAAGGAAAATGTTCAAGTTGAGGAAATTGGCACACCAAATTTGTGGGTTATTTTAGTTAGATGGAAATTGTCAATTTGCTTTGTAATGAGCGTAATCTCTAGCTCACTATAATAGTACATACCATAAATTTGTTGAGTCTTGTTGGGAGAAAAATAATATGGTATGCGGAGATTATGAACAAAATTATTTATCTCCCCTTCACGTGTTTAGCCAATCAAGTTAGAGTCACAAAATAATGAATACATTTCATCATTCTTTTTCCAGATATTTGGACCAGAAAGTAGTGGAAAGACCACTTTAGCATTGCATGCAATTGCAGAAGTACAGGTACATGCGTGTGTGTATATATATATACATATATTGTTACTTCTCACTGCTATTTTTTATTTATTTGCTGAGATGCTAGGAGGCACTAGGAACATGCTAGTTTGTCTGTTACGAGAATTAGTACCTATTCAGTTGTGACATGCAGAAACTAGGTGGAAATGCAATGCTTGTGGATGCAGAACATGCCTTTGATCCAGCATATTCTAAAGCTGTAGGAGTGGATGTAGAAAATTTGATTGTCTGCCAACCTGATCATGGAGAGATGGCACTTGAGAGTAATATTTCCTAGTTTGCTTCACGATTTTCTTGAATGAAATAGTTCTCGTGCCTTTTGGCTATGGTATGCTTGTGACAAATGTGTATTAATGGATGGACATTCTTATATCAGTTGCAGATCGCATGTGTAGATCTGGTGCTGTAGATCTCATTTGTGTTGATTCTGTTTCTGCTCTAACGCCAAGAGCAGAAATTGAAGTAATTTTTATGACCTTCTTGAGTTTCTAAAGCTTTCTTGTAAGATTGCTAATCTTACATTTATTATCCTTGCTTTGTAGGGTGAGATTGGCATGCAGCAAATGGGTCTGCAAGCACGGCTCATGAGTCAAGCTCTTCGTAAAATGTCTGGAAATGCCTCAAAAGCTGGTTGCACTCTCATCTTTTTGAATCAAATACGATATAAGGTTATTTCATTCTTCAATTAGGTTCAATAATTCTATCTTCAAAGTTCGGTAAATTTTGTGCATGGTAATGGGTCAGGGTCAATTTTCATGGGGGCTTTCTTTAGGTTTAAGATTTACTTTTTATTTTTCCTTCAGGGATTTAATTTTTTAAAAAGGATTCTATATATTTGTAATTTTACAATGATCAATGGAAAGTTGTGTTTCTTCTCAGAATTAAATAAACAAATAAATATCAGAGTCAGTTGATCAATGGAAAGTTGTGTTTCTTCTCAGAATTAAATAAACAAATAAATATTAGAGTCAGTTGATCAATGGAAAGTTGTGTTTCTTCTCAGAATTAAATAAACAAATAAATATCAGAGTCAGTTTGTTTGGCCAAGCCAGGTTAAACTGAATTTATCATGTATTTGCATCCTGTGTGAGAATTCTACTCTTAACCTTATTATTAGTACTGTATCAATATCATCATATGTAATATTTGAAAGCATAATGATAATGCTGTTCGTAATTTTATTAGATTGGTGTGTATTATGGGAACCCAGAAGTGACAAGTGGAGGAATTGCACTAAAGTTCTTTGCCTCACTTCGACTTGAAATACGTCAGACTGGGAAGCTAAAGTCTGTAAGAATGCTCTCTGTTATTTGCTTTATCTGAATCAATTAATAGTTTTTCCTTTTATTTTAAATACAAATTGAACTTTCATTTAGAAAGTACAGAAGCAATTACAATTTACATTAATGTCATAACATCCAATTGAGGCAAGCCTTATGCTGTGTGCTTCCTTCTTTCTAAGGCTAAAGGAGATGAAGAAATCGGGATTCGAGTTCGTGTTAGAGTGCAAAAGAGCAAGGTAAACTATGACAGTAATCAATTTTTGCTTAGCATCTCGTCAATTCTTATGAGCCTTTTCTTTCATAGCATTTCCGTTGATTTTGTTCAAATTCTAATTTCTAATATATTCATTTGCAAATAGAAACTAATGATGCTAGTTAGTTTCCATATGGTGCATTTGATTGGAATGATGCTTCTAATGAATCTTCCTCTGCATTTTTTTTGTTGTGGTTTAAAGACAATTTTTCTTATTATATATGGCTTTCATTAATTACCTCAAGTTGGTATTGTGATGTTCTTAATCTGAAGTGAAATTGGTGGGCCTCGTTTGATAACTACTTGGCCATTTCTCTATAGTTTTTAAAAATTGTGCTTGTTTTTCTCATCATTGAAATGAGTTTCATCTTTCTAAGAAAACATTTGAATTCTTAACCAAATTCCAAAAACAAAAACAAGTTTTTGATAACTATTTTTTTAGTTTTCAAAACTTGGTAGATATCAAAACAAATAACATATATGTGGAAATAGTATTTACAGGTTTATTTTTCAAAAACCACAAACCAAATGGTTTTCAAATGGGGTCTAATTTTCATGATTAAATGTACTCTTGCTAACGAACATGATACAAAGATGATACAAAGCAACTAGGACTAATTGGGAGTGAGGATTATTTGCTTCTTTGCGTGGTTATCATTTAAGATAGAGAAGTATTTTGGAAGATGATGCTTTGTTCTGCATACAAATAGAAACTTAGAAGAAAGAAAATCGAGATGAGCTATTTTATGGATTCTATGTTGTAGAAAGATTGCAGAAATTTAACCAAATCCATTTTATAGGTTGCACAACCGTGCCCTTGTGTTCTTAATTTGGGACAAGATAAAATGTACTCAGACAGGATAAAATATATTATATTTCTCAAGTTACAGTACAACATTTTGATAAATTGGTTTACCCATCACTTTGTAATGATGTCTTGTAGCCATTTGAACTATTTATTTTCAGTTGTATCAATTAATAAAATGTTTTGTTATGATATCTTCTTAATATTATGGTATATGGCAGGAATATTAGTGATCTTCAATTTGCCAGACTAAGCAGGCATTTAGTTTAGTTCTTAAATATTAGTCATGCTTGTAATTTAAAGGCTCTACATTGCCACCTTGAGCTTCCAATCTTTTTCCATAAAACATAGAATATTTTATCCAAAATGGGTTGCTATAGGTGTCGAGGCCATACAAGCAAGCCGAATTCGAAATAATCTTTGGAGAGGGAGTAAGTAAACTGGTGAGTATTGTAGGAGTAAGCATTTTTCAATTGTAGGCGCAAAATATTCTGTTCTAACTTCAAATTCTACTCTTTTCTCCCCCACAGGGTTGCATTTTAGATTGTGCTGAAATCATGGACATTGTAGTGAAAAAGGGCTCGTGGTACAGTTATGGGGACCACAGGTTTGTGGTAAAACATTGGATATTTTATTGCTGTTTTATTGGTAAAACATTGGATATTTTATTGCTGTTTTATTGGTAAAACATTGGATATTTTATTGCTGTTTTATTGGTAAAACATTGGATATTTTAATCGCTTTTGGTTAAATTGCTCTAAAAATTCATTATTTCCTTGTTTGCTAAAGGTTGGGACAGGGAAGAGACAGAGCTCTGCAATACTTGAAAGAAAATCCTGCTCTTCAAGAGGAAATTGAGAAGGTTTGTTTTTGCTCAAAACAAGTTTATAAGAACTACGATCCTGCTCTACTATGTTTTGAAGAAAAAAAAAAGTAGCTTTCACAATCTTATTTTTGTTTTTTAATCGATCGGGATCGTAGTTCTTATAAACGTGTTTTTGTGGAATTCAACTGAAAATTTAAATGTTATTGTAAATGAAAATCATAATAGAGAAATGGTGAGAAAATAAACACAATTTTAAAAAATCAAATAGTTATTACACAAGGCCTAAATAATTTAGGGCGGTAGTTAATGCTTGCTTGTCATGTTTAGTGACAATTATATATTTTTACCAAGATCTACTTTGCATGTCCCACGTTGGTTGGGGTGGAGAACAAATCACCATTTATAAGGGTGTGGAAACCTTTCCCTAGCAGACGCGTTTTAAAGCCTTGAGGGAAAGCTCTAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGATTTGGGTCGTTACATGAACAGATTTTTGTGATTAAATTTGAGGTCATGTTTCTTTTGAAATTGCTGTCTTTCATGAAAATTCTGGTTTTTTTTAAATGTATGGCAGACGGTGCAGACCACGCTGACTAGTGGAACTGTTCAAATGGGATTTCAATCTATCAGAAAGCCATTGCCGAATCAAGAAGAGGTTCTTGAGGAGTTTGAATAATGAACAATCTATGCTACGATTAAGCAGTAGCTACAGAGACTACGAGCAGAAGCAACATTTCTCGATAAGCCCCCAATAGATCGATTTTCCGTGTTACATCCAGTGATGCTATTAGAAGTTTTTTAGTTAGGTGCAAGCTAGATGTGATGAAGACCGAAAACTGGCTCTATTTGCATCGAACCTCCAAAGACAACGTTTTGGATCATCCACGAGTCTCTCCTTTGGTATCGCTTAAAACAGGTCGGTATGATTTGAACCTTATTCTTGAGAAGTTGATGAGGAAGTACCGTTGTAATTTGTACTGCAACTTATCAGGTATCATATTCAGATTTGTGTACTTGAAGTATTAACATTCCTAAATTTTTACCACTGCTTGGCATCCAGATTTATAGATTACATCAATTGCATCAGAATTATAATCACCATCTCTGAGGGCGATGGAATTCAAGCAAAAGCAGGGTATGGTTTCTTATATGAAGCCCCTTCCCTACTAGTACCAGGGGTTAGTAGTTCCATTTTTTCTTTACTTGAATTTCACTGTCAGTATACAAAAAAACATGTTCATAACTTAATTTAGGGTTCTTTGTAGGGGTCAGTTCTATTATCCCAATGCATTTCTCTTGAATATGCTACACAGAAGCATTTGGTTGTGTGTGATGATTTTGAAACTT

mRNA sequence

TTCTCACTGCTTCTCAGTTACGCTTCGCTTACCTTTGTCTATGGATTTCATTTCGAATCCACTGGCTTGCAAGACTCTCCCATGCCGGACACTGTTCCCGCCATGCGCAGCACCTTCTCGTCGCCGCCATTTCTCGCCCTTTTCACTGTCCAATACAGGCAAGCGAGTTGGAAGGCTTCGTTGCGAGTTCGATGTTAATGTTAATGGAGCTCTTTCCGGCGACTTTGATCCTCGCTCCGTCGACAGGAAAAAGGCATTGGAAGCAGCAATGAATGACATAAATAGCTCATTTGGGAAAGGAAGTGTTACACGACTCGGAAGTGCTGGAGGAGCGTTAGTGGAAACTTTCCCAAGTGGCTGTTTGACGTTAGACTGCGCCTTAGGCGGCGGCCTTCCTAAAGGCAGAATTGTTGAGATATTTGGACCAGAAAGTAGTGGAAAGACCACTTTAGCATTGCATGCAATTGCAGAAGTACAGAAACTAGGTGGAAATGCAATGCTTGTGGATGCAGAACATGCCTTTGATCCAGCATATTCTAAAGCTGTAGGAGTGGATGTAGAAAATTTGATTGTCTGCCAACCTGATCATGGAGAGATGGCACTTGAGATTGCAGATCGCATGTGTAGATCTGGTGCTGTAGATCTCATTTGTGTTGATTCTGTTTCTGCTCTAACGCCAAGAGCAGAAATTGAAGGTGAGATTGGCATGCAGCAAATGGGTCTGCAAGCACGGCTCATGAGTCAAGCTCTTCGTAAAATGTCTGGAAATGCCTCAAAAGCTGGTTGCACTCTCATCTTTTTGAATCAAATACGATATAAGATTGGTGTGTATTATGGGAACCCAGAAGTGACAAGTGGAGGAATTGCACTAAAGTTCTTTGCCTCACTTCGACTTGAAATACGTCAGACTGGGAAGCTAAAGTCTGCTAAAGGAGATGAAGAAATCGGGATTCGAGTTCGTGTTAGAGTGCAAAAGAGCAAGGTGTCGAGGCCATACAAGCAAGCCGAATTCGAAATAATCTTTGGAGAGGGAGTAAGTAAACTGGGTTGCATTTTAGATTGTGCTGAAATCATGGACATTGTAGTGAAAAAGGGCTCGTGGTACAGTTATGGGGACCACAGGTTGGGACAGGGAAGAGACAGAGCTCTGCAATACTTGAAAGAAAATCCTGCTCTTCAAGAGGAAATTGAGAAGACGGTGCAGACCACGCTGACTAGTGGAACTGTTCAAATGGGATTTCAATCTATCAGAAAGCCATTGCCGAATCAAGAAGAGGTTCTTGAGGAGTTTGAATAATGAACAATCTATGCTACGATTAAGCAGTAGCTACAGAGACTACGAGCAGAAGCAACATTTCTCGATAAGCCCCCAATAGATCGATTTTCCGTGTTACATCCAGTGATGCTATTAGAAGTTTTTTAGTTAGGTGCAAGCTAGATGTGATGAAGACCGAAAACTGGCTCTATTTGCATCGAACCTCCAAAGACAACGTTTTGGATCATCCACGAGTCTCTCCTTTGGTATCGCTTAAAACAGGTCGGTATGATTTGAACCTTATTCTTGAGAAGTTGATGAGGAAGTACCGTTGTAATTTGTACTGCAACTTATCAGGTATCATATTCAGATTTGTGTACTTGAAGTATTAACATTCCTAAATTTTTACCACTGCTTGGCATCCAGATTTATAGATTACATCAATTGCATCAGAATTATAATCACCATCTCTGAGGGCGATGGAATTCAAGCAAAAGCAGGGTATGGTTTCTTATATGAAGCCCCTTCCCTACTAGTACCAGGGGTTAGTAGTTCCATTTTTTCTTTACTTGAATTTCACTGTCAGTATACAAAAAAACATGTTCATAACTTAATTTAGGGTTCTTTGTAGGGGTCAGTTCTATTATCCCAATGCATTTCTCTTGAATATGCTACACAGAAGCATTTGGTTGTGTGTGATGATTTTGAAACTT

Coding sequence (CDS)

ATGGATTTCATTTCGAATCCACTGGCTTGCAAGACTCTCCCATGCCGGACACTGTTCCCGCCATGCGCAGCACCTTCTCGTCGCCGCCATTTCTCGCCCTTTTCACTGTCCAATACAGGCAAGCGAGTTGGAAGGCTTCGTTGCGAGTTCGATGTTAATGTTAATGGAGCTCTTTCCGGCGACTTTGATCCTCGCTCCGTCGACAGGAAAAAGGCATTGGAAGCAGCAATGAATGACATAAATAGCTCATTTGGGAAAGGAAGTGTTACACGACTCGGAAGTGCTGGAGGAGCGTTAGTGGAAACTTTCCCAAGTGGCTGTTTGACGTTAGACTGCGCCTTAGGCGGCGGCCTTCCTAAAGGCAGAATTGTTGAGATATTTGGACCAGAAAGTAGTGGAAAGACCACTTTAGCATTGCATGCAATTGCAGAAGTACAGAAACTAGGTGGAAATGCAATGCTTGTGGATGCAGAACATGCCTTTGATCCAGCATATTCTAAAGCTGTAGGAGTGGATGTAGAAAATTTGATTGTCTGCCAACCTGATCATGGAGAGATGGCACTTGAGATTGCAGATCGCATGTGTAGATCTGGTGCTGTAGATCTCATTTGTGTTGATTCTGTTTCTGCTCTAACGCCAAGAGCAGAAATTGAAGGTGAGATTGGCATGCAGCAAATGGGTCTGCAAGCACGGCTCATGAGTCAAGCTCTTCGTAAAATGTCTGGAAATGCCTCAAAAGCTGGTTGCACTCTCATCTTTTTGAATCAAATACGATATAAGATTGGTGTGTATTATGGGAACCCAGAAGTGACAAGTGGAGGAATTGCACTAAAGTTCTTTGCCTCACTTCGACTTGAAATACGTCAGACTGGGAAGCTAAAGTCTGCTAAAGGAGATGAAGAAATCGGGATTCGAGTTCGTGTTAGAGTGCAAAAGAGCAAGGTGTCGAGGCCATACAAGCAAGCCGAATTCGAAATAATCTTTGGAGAGGGAGTAAGTAAACTGGGTTGCATTTTAGATTGTGCTGAAATCATGGACATTGTAGTGAAAAAGGGCTCGTGGTACAGTTATGGGGACCACAGGTTGGGACAGGGAAGAGACAGAGCTCTGCAATACTTGAAAGAAAATCCTGCTCTTCAAGAGGAAATTGAGAAGACGGTGCAGACCACGCTGACTAGTGGAACTGTTCAAATGGGATTTCAATCTATCAGAAAGCCATTGCCGAATCAAGAAGAGGTTCTTGAGGAGTTTGAATAA

Protein sequence

MDFISNPLACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVGRLRCEFDVNVNGALSGDFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDHRLGQGRDRALQYLKENPALQEEIEKTVQTTLTSGTVQMGFQSIRKPLPNQEEVLEEFE

Homology

[Close]

BLAST of Carg24697 vs. NCBI nr
Match: KAG7037524.1 (DNA repair protein recA-like 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 831.6 bits (2147), Expect = 2.9e-237
Identity = 418/418 (100.00%), Postives = 418/418 (100.00%), Query Frame = 0


Query: 1   MDFISNPLACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVGRLRCEFDVNVNGALSG 60
           MDFISNPLACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVGRLRCEFDVNVNGALSG
Sbjct: 1   MDFISNPLACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVGRLRCEFDVNVNGALSG 60

Query: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120
           DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK
Sbjct: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120

Query: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180
           GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ
Sbjct: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180

Query: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240
           PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM
Sbjct: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240

Query: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE 300
           SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE
Sbjct: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE 300

Query: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH 360
           EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH
Sbjct: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH 360

Query: 361 RLGQGRDRALQYLKENPALQEEIEKTVQTTLTSGTVQMGFQSIRKPLPNQEEVLEEFE 419
           RLGQGRDRALQYLKENPALQEEIEKTVQTTLTSGTVQMGFQSIRKPLPNQEEVLEEFE
Sbjct: 361 RLGQGRDRALQYLKENPALQEEIEKTVQTTLTSGTVQMGFQSIRKPLPNQEEVLEEFE 418

[Close]

BLAST of Carg24697 vs. NCBI nr
Match: KAG6608007.1 (DNA repair protein recA-like 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 828.6 bits (2139), Expect = 2.5e-236
Identity = 417/418 (99.76%), Postives = 417/418 (99.76%), Query Frame = 0


Query: 1   MDFISNPLACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVGRLRCEFDVNVNGALSG 60
           MDFISNPLACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVGRLRCEFDVNVNGALSG
Sbjct: 1   MDFISNPLACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVGRLRCEFDVNVNGALSG 60

Query: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120
           DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK
Sbjct: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120

Query: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180
           GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ
Sbjct: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180

Query: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240
           PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM
Sbjct: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240

Query: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE 300
           SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE
Sbjct: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE 300

Query: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH 360
           EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH
Sbjct: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH 360

Query: 361 RLGQGRDRALQYLKENPALQEEIEKTVQTTLTSGTVQMGFQSIRKPLPNQEEVLEEFE 419
           RLGQGRDRALQYLKENPALQEEIEKTVQTTLTSGTVQMGFQSIRKPL NQEEVLEEFE
Sbjct: 361 RLGQGRDRALQYLKENPALQEEIEKTVQTTLTSGTVQMGFQSIRKPLSNQEEVLEEFE 418

[Close]

BLAST of Carg24697 vs. NCBI nr
Match: XP_023524459.1 (DNA repair protein recA homolog 1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 827.0 bits (2135), Expect = 7.2e-236
Identity = 414/418 (99.04%), Postives = 417/418 (99.76%), Query Frame = 0


Query: 1   MDFISNPLACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVGRLRCEFDVNVNGALSG 60
           MDFISNP+ACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVG+LRCEFDVNVNGALSG
Sbjct: 1   MDFISNPMACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVGKLRCEFDVNVNGALSG 60

Query: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120
           DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK
Sbjct: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120

Query: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180
           GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP YSKAVGVDVENLIVCQ
Sbjct: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPTYSKAVGVDVENLIVCQ 180

Query: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240
           PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM
Sbjct: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240

Query: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE 300
           SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE
Sbjct: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE 300

Query: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH 360
           EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH
Sbjct: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH 360

Query: 361 RLGQGRDRALQYLKENPALQEEIEKTVQTTLTSGTVQMGFQSIRKPLPNQEEVLEEFE 419
           RLGQGRDRALQYLKENPALQ+EIEKTVQTTLTSGTVQMGFQSIRKPLPNQEEVLEEFE
Sbjct: 361 RLGQGRDRALQYLKENPALQDEIEKTVQTTLTSGTVQMGFQSIRKPLPNQEEVLEEFE 418

[Close]

BLAST of Carg24697 vs. NCBI nr
Match: XP_022940951.1 (DNA repair protein recA homolog 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 826.2 bits (2133), Expect = 1.2e-235
Identity = 414/418 (99.04%), Postives = 416/418 (99.52%), Query Frame = 0


Query: 1   MDFISNPLACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVGRLRCEFDVNVNGALSG 60
           MDFISNP+ACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVG+LRCEFD NVNGALSG
Sbjct: 1   MDFISNPMACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVGKLRCEFDFNVNGALSG 60

Query: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120
           DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK
Sbjct: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120

Query: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180
           GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP YSKAVGVDVENLIVCQ
Sbjct: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPTYSKAVGVDVENLIVCQ 180

Query: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240
           PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM
Sbjct: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240

Query: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE 300
           SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE
Sbjct: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE 300

Query: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH 360
           EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH
Sbjct: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH 360

Query: 361 RLGQGRDRALQYLKENPALQEEIEKTVQTTLTSGTVQMGFQSIRKPLPNQEEVLEEFE 419
           RLGQGRDRALQYLKENPALQEEIEKTVQTTLTSGTVQMGFQSIRKPLPNQEEVLEEFE
Sbjct: 361 RLGQGRDRALQYLKENPALQEEIEKTVQTTLTSGTVQMGFQSIRKPLPNQEEVLEEFE 418

[Close]

BLAST of Carg24697 vs. NCBI nr
Match: XP_022981737.1 (DNA repair protein recA homolog 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 824.3 bits (2128), Expect = 4.7e-235
Identity = 413/418 (98.80%), Postives = 417/418 (99.76%), Query Frame = 0


Query: 1   MDFISNPLACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVGRLRCEFDVNVNGALSG 60
           MDFISNPLACKTLPCRTLFPPCAA SRRRHFSPFSLSNTGKRVG+LRCEFDVNVNGALSG
Sbjct: 1   MDFISNPLACKTLPCRTLFPPCAASSRRRHFSPFSLSNTGKRVGKLRCEFDVNVNGALSG 60

Query: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120
           DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK
Sbjct: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120

Query: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180
           GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ
Sbjct: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180

Query: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240
           PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM
Sbjct: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240

Query: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE 300
           SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE
Sbjct: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE 300

Query: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH 360
           EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH
Sbjct: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH 360

Query: 361 RLGQGRDRALQYLKENPALQEEIEKTVQTTLTSGTVQMGFQSIRKPLPNQEEVLEEFE 419
           RLGQGRDRALQYLK+NPALQ+EIEKTVQTTLTSGTVQMGFQS+RKPLPNQEEVLEEFE
Sbjct: 361 RLGQGRDRALQYLKDNPALQDEIEKTVQTTLTSGTVQMGFQSLRKPLPNQEEVLEEFE 418

[Close]

BLAST of Carg24697 vs. ExPASy Swiss-Prot
Match: Q39199 (DNA repair protein recA homolog 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RECA PE=2 SV=1)

HSP 1 Score: 614.4 bits (1583), Expect = 9.6e-175
Identity = 313/385 (81.30%), Postives = 342/385 (88.83%), Query Frame = 0


Query: 14  PCRTLFPPCAAPS--RRRHFSPFSLSNTGKRVGRLRCEFDVNVNGALSGDFDPRSVDRKK 73
           PC +  P     S   RR +SP ++    K   ++  EFD  +NGALS D D R +DR+K
Sbjct: 26  PCSSFSPSLRFSSCYSRRLYSPVTVYAAKKLSHKISSEFDDRINGALSPDADSRFLDRQK 85

Query: 74  ALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEIFGPES 133
           ALEAAMNDINSSFGKGSVTRLGSAGGALVETF SG LTLD ALGGGLPKGR+VEI+GPES
Sbjct: 86  ALEAAMNDINSSFGKGSVTRLGSAGGALVETFSSGILTLDLALGGGLPKGRVVEIYGPES 145

Query: 134 SGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHGEMALEIA 193
           SGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKA+GVDVENLIVCQPD+GEMALE A
Sbjct: 146 SGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGEMALETA 205

Query: 194 DRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTL 253
           DRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTL
Sbjct: 206 DRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTL 265

Query: 254 IFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDEEIGIRVRVRVQ 313
           IFLNQIRYKIGVYYGNPEVTSGGIALKFFAS+RLEIR  GK+KS+KGDE+IG+R RVRVQ
Sbjct: 266 IFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSAGKIKSSKGDEDIGLRARVRVQ 325

Query: 314 KSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDHRLGQGRDRALQ 373
           KSKVSRPYKQAEFEI+FGEGVSKLGC+LDCAEIM++VVKKGSWYSY D RLGQGR++ALQ
Sbjct: 326 KSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEIMEVVVKKGSWYSYEDQRLGQGREKALQ 385

Query: 374 YLKENPALQEEIEKTVQTTLTSGTV 397
           +L+ENPALQ+EIEK V+  +  G V
Sbjct: 386 HLRENPALQDEIEKKVRLLMLDGEV 410

[Close]

BLAST of Carg24697 vs. ExPASy Swiss-Prot
Match: P48293 (Protein RecA OS=Arthrospira platensis OX=118562 GN=recA PE=3 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 1.8e-117
Identity = 204/329 (62.01%), Postives = 262/329 (79.64%), Query Frame = 0


Query: 68  DRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEIF 127
           +++KAL + +N I  SFGKGS+ RLG +    VET  SG LTLD ALGGGLP+GR++EI+
Sbjct: 9   EKQKALNSVLNQIEKSFGKGSIVRLGDSARMKVETISSGALTLDLALGGGLPRGRVIEIY 68

Query: 128 GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHGEMA 187
           GPESSGKTTLALHAIAE+QK GG A  VDAEHA DP Y+ A+GVD+ENL+V QPD GEMA
Sbjct: 69  GPESSGKTTLALHAIAEIQKTGGIAAFVDAEHALDPTYAAALGVDIENLLVSQPDTGEMA 128

Query: 188 LEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKA 247
           LEI D++ RS AVD++ VDSV+AL PRAEIEG++G   MGLQARLMSQALRK++GN  K+
Sbjct: 129 LEIVDQLVRSVAVDIVVVDSVAALVPRAEIEGDMGDSHMGLQARLMSQALRKITGNIGKS 188

Query: 248 GCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDEEIGIRVR 307
           GCT+IFLNQ+R KIG+ YGNPE T+GG ALKF+AS+RL+IR+T  LK  KG +E GIR +
Sbjct: 189 GCTVIFLNQLRQKIGIVYGNPETTTGGNALKFYASVRLDIRRTQTLK--KGSDEYGIRAK 248

Query: 308 VRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDHRLGQGRD 367
           V+V K+KV+ P++ AEF+IIFG+G+S +GC++D AE   ++ +KG+WYSY +  +GQGRD
Sbjct: 249 VKVAKNKVAPPFRIAEFDIIFGQGISTIGCLIDLAEETGVIKRKGAWYSYNNENIGQGRD 308

Query: 368 RALQYLKENPALQEEIEKTVQTTLTSGTV 397
           R + Y++ENPA  EEI+K V+  L  G V
Sbjct: 309 RTITYMQENPAFTEEIDKRVRAALAGGAV 335

[Close]

BLAST of Carg24697 vs. ExPASy Swiss-Prot
Match: Q8DH70 (Protein RecA OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=recA PE=3 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 2.5e-114
Identity = 204/323 (63.16%), Postives = 257/323 (79.57%), Query Frame = 0


Query: 66  SVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVE 125
           S +++KALE A++ I  SFGKGS+ RLG A    VET  SG LTLD ALGGGLPKGRI+E
Sbjct: 10  SPEKRKALEFAISQIERSFGKGSIMRLGDATSMKVETISSGALTLDLALGGGLPKGRIIE 69

Query: 126 IFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHGE 185
           I+GPESSGKTTLALHAIAEVQK GG A  VDAEHA DP Y+ A+ VD++NL+V QPD GE
Sbjct: 70  IYGPESSGKTTLALHAIAEVQKAGGVAAFVDAEHALDPTYAAALRVDIQNLLVAQPDTGE 129

Query: 186 MALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNAS 245
            ALEI D++ RS AVD+I VDSV+AL PRAEIEG++G   +GLQARLMSQALRK++GN S
Sbjct: 130 AALEIVDQLVRSTAVDIIVVDSVAALVPRAEIEGDMGESHVGLQARLMSQALRKINGNIS 189

Query: 246 KAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDEEIGIR 305
           K GCT+IFLNQ+R KIG+ YGNPE T+GG+ALKF+AS+RL+IR+   LK  KG EE GIR
Sbjct: 190 KTGCTVIFLNQLRQKIGLTYGNPETTTGGVALKFYASVRLDIRRVQTLK--KGTEEFGIR 249

Query: 306 VRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDHRLGQG 365
            +V+V K+KV+ P++ AEF+IIFG+G++ LGCILD AE + ++ +KG+WYSY    L QG
Sbjct: 250 AKVKVAKNKVAPPFRIAEFDIIFGKGIANLGCILDMAEEVGVITRKGAWYSYNGENLAQG 309

Query: 366 RDRALQYLKENPALQEEIEKTVQ 389
           RD  + Y++ENP+  +EIE+ V+
Sbjct: 310 RDNTINYMEENPSFAQEIEQQVR 330

[Close]

BLAST of Carg24697 vs. ExPASy Swiss-Prot
Match: A2CC22 (Protein RecA OS=Prochlorococcus marinus (strain MIT 9303) OX=59922 GN=recA PE=3 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 4.7e-113
Identity = 201/333 (60.36%), Postives = 258/333 (77.48%), Query Frame = 0


Query: 63  DPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGR 122
           +PR  +R KAL   +  I  +FGKGS+ RLG A    VETFP+G LTLD ALGGG PKGR
Sbjct: 19  EPRPGERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETFPTGALTLDLALGGGYPKGR 78

Query: 123 IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPD 182
           +VE++GPESSGKTTL LHAIAEVQ+ GG A  VDAEHA DP Y+ ++GVD+ENL+V QPD
Sbjct: 79  VVEVYGPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAASLGVDIENLLVSQPD 138

Query: 183 HGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSG 242
            GEMALEI D++ RS AVD++ VDSV+ALTPR+EIEGE+G   +G QARLMSQA+RK++G
Sbjct: 139 TGEMALEIVDQLVRSAAVDIVVVDSVAALTPRSEIEGEMGDLAVGSQARLMSQAMRKITG 198

Query: 243 NASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDEEI 302
           N  K+GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+AS+RL+IR+   LK  +G EE 
Sbjct: 199 NIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEY 258

Query: 303 GIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDHRL 362
           GIR +V+V K+KV+ P++ AEF+I+FG G+S LGC+LD AE   +V++KG+WYSY    +
Sbjct: 259 GIRAKVKVAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVIRKGAWYSYEGDNI 318

Query: 363 GQGRDRALQYLKENPALQEEIEKTVQTTLTSGT 396
           GQGRD  + +L++N   QE+IE  V+  LT G+
Sbjct: 319 GQGRDNTITWLEQNSEAQEQIEVLVRQKLTEGS 349

[Close]

BLAST of Carg24697 vs. ExPASy Swiss-Prot
Match: Q7V547 (Protein RecA OS=Prochlorococcus marinus (strain MIT 9313) OX=74547 GN=recA PE=3 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 4.7e-113
Identity = 201/333 (60.36%), Postives = 258/333 (77.48%), Query Frame = 0


Query: 63  DPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGR 122
           +PR  +R KAL   +  I  +FGKGS+ RLG A    VETFP+G LTLD ALGGG PKGR
Sbjct: 19  EPRPGERDKALNLVLGQIERNFGKGSIMRLGDASRMRVETFPTGALTLDLALGGGYPKGR 78

Query: 123 IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPD 182
           +VE++GPESSGKTTL LHAIAEVQ+ GG A  VDAEHA DP Y+ ++GVD+ENL+V QPD
Sbjct: 79  VVEVYGPESSGKTTLTLHAIAEVQRRGGVAAFVDAEHALDPVYAASLGVDIENLLVSQPD 138

Query: 183 HGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSG 242
            GEMALEI D++ RS AVD++ VDSV+ALTPR+EIEGE+G   +G QARLMSQA+RK++G
Sbjct: 139 TGEMALEIVDQLVRSAAVDIVVVDSVAALTPRSEIEGEMGDLAVGSQARLMSQAMRKITG 198

Query: 243 NASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDEEI 302
           N  K+GCT+IFLNQ+R KIGV YGNPE T+GG ALKF+AS+RL+IR+   LK  +G EE 
Sbjct: 199 NIGKSGCTVIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLK--RGTEEY 258

Query: 303 GIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDHRL 362
           GIR +V+V K+KV+ P++ AEF+I+FG G+S LGC+LD AE   +V++KG+WYSY    +
Sbjct: 259 GIRAKVKVAKNKVAPPFRIAEFDILFGRGISTLGCLLDLAEETGVVIRKGAWYSYEGDNI 318

Query: 363 GQGRDRALQYLKENPALQEEIEKTVQTTLTSGT 396
           GQGRD  + +L++N   QE+IE  V+  LT G+
Sbjct: 319 GQGRDNTITWLEQNSEAQEQIEVLVRQKLTEGS 349

[Close]

BLAST of Carg24697 vs. ExPASy TrEMBL
Match: A0A6J1FJT7 (DNA repair protein recA homolog 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111446383 PE=3 SV=1)

HSP 1 Score: 826.2 bits (2133), Expect = 6.0e-236
Identity = 414/418 (99.04%), Postives = 416/418 (99.52%), Query Frame = 0


Query: 1   MDFISNPLACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVGRLRCEFDVNVNGALSG 60
           MDFISNP+ACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVG+LRCEFD NVNGALSG
Sbjct: 1   MDFISNPMACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVGKLRCEFDFNVNGALSG 60

Query: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120
           DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK
Sbjct: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120

Query: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180
           GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP YSKAVGVDVENLIVCQ
Sbjct: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPTYSKAVGVDVENLIVCQ 180

Query: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240
           PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM
Sbjct: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240

Query: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE 300
           SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE
Sbjct: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE 300

Query: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH 360
           EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH
Sbjct: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH 360

Query: 361 RLGQGRDRALQYLKENPALQEEIEKTVQTTLTSGTVQMGFQSIRKPLPNQEEVLEEFE 419
           RLGQGRDRALQYLKENPALQEEIEKTVQTTLTSGTVQMGFQSIRKPLPNQEEVLEEFE
Sbjct: 361 RLGQGRDRALQYLKENPALQEEIEKTVQTTLTSGTVQMGFQSIRKPLPNQEEVLEEFE 418

[Close]

BLAST of Carg24697 vs. ExPASy TrEMBL
Match: A0A6J1IUU1 (DNA repair protein recA homolog 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111480803 PE=3 SV=1)

HSP 1 Score: 824.3 bits (2128), Expect = 2.3e-235
Identity = 413/418 (98.80%), Postives = 417/418 (99.76%), Query Frame = 0


Query: 1   MDFISNPLACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVGRLRCEFDVNVNGALSG 60
           MDFISNPLACKTLPCRTLFPPCAA SRRRHFSPFSLSNTGKRVG+LRCEFDVNVNGALSG
Sbjct: 1   MDFISNPLACKTLPCRTLFPPCAASSRRRHFSPFSLSNTGKRVGKLRCEFDVNVNGALSG 60

Query: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120
           DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK
Sbjct: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120

Query: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180
           GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ
Sbjct: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180

Query: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240
           PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM
Sbjct: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240

Query: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE 300
           SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE
Sbjct: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE 300

Query: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH 360
           EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH
Sbjct: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH 360

Query: 361 RLGQGRDRALQYLKENPALQEEIEKTVQTTLTSGTVQMGFQSIRKPLPNQEEVLEEFE 419
           RLGQGRDRALQYLK+NPALQ+EIEKTVQTTLTSGTVQMGFQS+RKPLPNQEEVLEEFE
Sbjct: 361 RLGQGRDRALQYLKDNPALQDEIEKTVQTTLTSGTVQMGFQSLRKPLPNQEEVLEEFE 418

[Close]

BLAST of Carg24697 vs. ExPASy TrEMBL
Match: A0A6J1C5R2 (DNA repair protein recA homolog 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008660 PE=3 SV=1)

HSP 1 Score: 782.3 bits (2019), Expect = 9.9e-223
Identity = 391/418 (93.54%), Postives = 401/418 (95.93%), Query Frame = 0


Query: 1   MDFISNPLACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVGRLRCEFDVNVNGALSG 60
           MDF+SNPL CKT PCRTL PP A PSRRRH  P SLS +G+RVG LRCEF+ NVNGALSG
Sbjct: 1   MDFVSNPLTCKTFPCRTLLPPWATPSRRRHCLPPSLSLSGRRVGNLRCEFEANVNGALSG 60

Query: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120
           DFDPRSVDRKKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK
Sbjct: 61  DFDPRSVDRKKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120

Query: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180
           GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ
Sbjct: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180

Query: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240
           PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM
Sbjct: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240

Query: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE 300
           SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIR  GKLKSAKGDE
Sbjct: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDE 300

Query: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH 360
           EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMD++VKKGSWYSYGDH
Sbjct: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDVIVKKGSWYSYGDH 360

Query: 361 RLGQGRDRALQYLKENPALQEEIEKTVQTTLTSGTVQMGFQSIRKPLPNQEEVLEEFE 419
           RLGQGRDRALQYLK+NP LQ+EIEK VQT L SGTVQMGFQSIRKPLPNQEEVLEEF+
Sbjct: 361 RLGQGRDRALQYLKDNPVLQDEIEKAVQTMLASGTVQMGFQSIRKPLPNQEEVLEEFQ 418

[Close]

BLAST of Carg24697 vs. ExPASy TrEMBL
Match: A0A0A0LBT0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G524580 PE=3 SV=1)

HSP 1 Score: 765.0 bits (1974), Expect = 1.6e-217
Identity = 389/418 (93.06%), Postives = 397/418 (94.98%), Query Frame = 0


Query: 1   MDFISNPLACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVGRLRCEFDVNVNGALSG 60
           M FISN + CKTLPCRTLFP CAA S  R + P SLSN GKRV  LRCEF+VN+NGALSG
Sbjct: 1   MIFISNSMPCKTLPCRTLFPQCAASSGPRQWLPSSLSNAGKRVRELRCEFEVNLNGALSG 60

Query: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120
           DFDPRSVDRKKALEAAMNDIN SFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK
Sbjct: 61  DFDPRSVDRKKALEAAMNDINGSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120

Query: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180
           GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP YSKAVGVDVENLIVCQ
Sbjct: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPTYSKAVGVDVENLIVCQ 180

Query: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240
           PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM
Sbjct: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240

Query: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE 300
           SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIR  GKLKSAKGDE
Sbjct: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRSIGKLKSAKGDE 300

Query: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH 360
           EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIM+IVVKKGSWYSYGD 
Sbjct: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMEIVVKKGSWYSYGDQ 360

Query: 361 RLGQGRDRALQYLKENPALQEEIEKTVQTTLTSGTVQMGFQSIRKPLPNQEEVLEEFE 419
           RLGQGRDRALQY K+NPALQ+EIEKT+QT LTSGTVQMGFQSIRKPLPNQ EVLEEFE
Sbjct: 361 RLGQGRDRALQYFKDNPALQDEIEKTLQTMLTSGTVQMGFQSIRKPLPNQ-EVLEEFE 417

[Close]

BLAST of Carg24697 vs. ExPASy TrEMBL
Match: A0A1S3BAR5 (DNA repair protein recA homolog 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487647 PE=3 SV=1)

HSP 1 Score: 764.6 bits (1973), Expect = 2.1e-217
Identity = 389/418 (93.06%), Postives = 396/418 (94.74%), Query Frame = 0


Query: 1   MDFISNPLACKTLPCRTLFPPCAAPSRRRHFSPFSLSNTGKRVGRLRCEFDVNVNGALSG 60
           M  +SN L CKTLPCRTLFPPCA  SR R + P SLSN   RV  LRCEF+VNVNGALSG
Sbjct: 1   MVLVSNSLPCKTLPCRTLFPPCATSSRPRQWLPSSLSNASNRVRELRCEFEVNVNGALSG 60

Query: 61  DFDPRSVDRKKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120
           DFDPRSVDRKKALEAAMNDIN SFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK
Sbjct: 61  DFDPRSVDRKKALEAAMNDINGSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPK 120

Query: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180
           GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ
Sbjct: 121 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 180

Query: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240
           PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM
Sbjct: 181 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 240

Query: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDE 300
           SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIR  GKLKSAKGDE
Sbjct: 241 SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRPIGKLKSAKGDE 300

Query: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDH 360
           EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIM+IVVKKGSWYSYGD 
Sbjct: 301 EIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMEIVVKKGSWYSYGDQ 360

Query: 361 RLGQGRDRALQYLKENPALQEEIEKTVQTTLTSGTVQMGFQSIRKPLPNQEEVLEEFE 419
           RLGQGRDRALQYLK+ PALQ+EIEKT+QT LTSGTVQMGFQSIRKPLPNQ EVLEEFE
Sbjct: 361 RLGQGRDRALQYLKDTPALQDEIEKTLQTMLTSGTVQMGFQSIRKPLPNQ-EVLEEFE 417

[Close]

BLAST of Carg24697 vs. TAIR 10
Match: AT1G79050.1 (recA DNA recombination family protein )

HSP 1 Score: 614.4 bits (1583), Expect = 6.8e-176
Identity = 313/385 (81.30%), Postives = 342/385 (88.83%), Query Frame = 0


Query: 14  PCRTLFPPCAAPS--RRRHFSPFSLSNTGKRVGRLRCEFDVNVNGALSGDFDPRSVDRKK 73
           PC +  P     S   RR +SP ++    K   ++  EFD  +NGALS D D R +DR+K
Sbjct: 26  PCSSFSPSLRFSSCYSRRLYSPVTVYAAKKLSHKISSEFDDRINGALSPDADSRFLDRQK 85

Query: 74  ALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEIFGPES 133
           ALEAAMNDINSSFGKGSVTRLGSAGGALVETF SG LTLD ALGGGLPKGR+VEI+GPES
Sbjct: 86  ALEAAMNDINSSFGKGSVTRLGSAGGALVETFSSGILTLDLALGGGLPKGRVVEIYGPES 145

Query: 134 SGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHGEMALEIA 193
           SGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKA+GVDVENLIVCQPD+GEMALE A
Sbjct: 146 SGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGEMALETA 205

Query: 194 DRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTL 253
           DRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTL
Sbjct: 206 DRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTL 265

Query: 254 IFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDEEIGIRVRVRVQ 313
           IFLNQIRYKIGVYYGNPEVTSGGIALKFFAS+RLEIR  GK+KS+KGDE+IG+R RVRVQ
Sbjct: 266 IFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSAGKIKSSKGDEDIGLRARVRVQ 325

Query: 314 KSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDHRLGQGRDRALQ 373
           KSKVSRPYKQAEFEI+FGEGVSKLGC+LDCAEIM++VVKKGSWYSY D RLGQGR++ALQ
Sbjct: 326 KSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEIMEVVVKKGSWYSYEDQRLGQGREKALQ 385

Query: 374 YLKENPALQEEIEKTVQTTLTSGTV 397
           +L+ENPALQ+EIEK V+  +  G V
Sbjct: 386 HLRENPALQDEIEKKVRLLMLDGEV 410

[Close]

BLAST of Carg24697 vs. TAIR 10
Match: AT1G79050.2 (recA DNA recombination family protein )

HSP 1 Score: 497.3 bits (1279), Expect = 1.2e-140
Identity = 258/312 (82.69%), Postives = 276/312 (88.46%), Query Frame = 0


Query: 14  PCRTLFPPCAAPS--RRRHFSPFSLSNTGKRVGRLRCEFDVNVNGALSGDFDPRSVDRKK 73
           PC +  P     S   RR +SP ++    K   ++  EFD  +NGALS D D R +DR+K
Sbjct: 26  PCSSFSPSLRFSSCYSRRLYSPVTVYAAKKLSHKISSEFDDRINGALSPDADSRFLDRQK 85

Query: 74  ALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKGRIVEIFGPES 133
           ALEAAMNDINSSFGKGSVTRLGSAGGALVETF SG LTLD ALGGGLPKGR+VEI+GPES
Sbjct: 86  ALEAAMNDINSSFGKGSVTRLGSAGGALVETFSSGILTLDLALGGGLPKGRVVEIYGPES 145

Query: 134 SGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHGEMALEIA 193
           SGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKA+GVDVENLIVCQPD+GEMALE A
Sbjct: 146 SGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNGEMALETA 205

Query: 194 DRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTL 253
           DRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTL
Sbjct: 206 DRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTL 265

Query: 254 IFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRQTGKLKSAKGDEEIGIRVRVRVQ 313
           IFLNQIRYKIGVYYGNPEVTSGGIALKFFAS+RLEIR  GK+KS+KGDE+IG+R RVRVQ
Sbjct: 266 IFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSAGKIKSSKGDEDIGLRARVRVQ 325

Query: 314 KSKVSRPYKQAE 324
           KSKVSRPYKQ E
Sbjct: 326 KSKVSRPYKQEE 337

[Close]

BLAST of Carg24697 vs. TAIR 10
Match: AT2G19490.1 (recA DNA recombination family protein )

HSP 1 Score: 296.2 bits (757), Expect = 4.1e-80
Identity = 161/325 (49.54%), Postives = 226/325 (69.54%), Query Frame = 0


Query: 72  ALEAAMNDINSSFGKGSVTRLGSA-GGALVETFPSGCLTLDCALG-GGLPKGRIVEIFGP 131
           AL+ A++ I SSFGKGS+  LG A     V  F +G   LD ALG GGLPKGR+VEI+GP
Sbjct: 61  ALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPKGRVVEIYGP 120

Query: 132 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQPDHGEMALE 191
           E+SGKTTLALH IAE QK GG  + VDAEHA D + +KA+GV+ ENL++ QPD GE AL 
Sbjct: 121 EASGKTTLALHVIAEAQKQGGTCVFVDAEHALDSSLAKAIGVNTENLLLSQPDCGEQALS 180

Query: 192 IADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGC 251
           + D + RSG+VD+I VDSV+AL P+ E+EGE+G   M +QARLMSQALRK+S + S +  
Sbjct: 181 LVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAHMAMQARLMSQALRKLSHSLSLSQT 240

Query: 252 TLIFLNQIRYKIGVY--YGNP-EVTSGGIALKFFASLRLEIRQTGKLKSAKGDEEIGIRV 311
            LIF+NQ+R K+  +  +G P EVT GG ALKF+AS+RL I++ G +K  KG+E  G +V
Sbjct: 241 LLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASMRLNIKRIGLIK--KGEETTGSQV 300

Query: 312 RVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSYGDHRLGQGR 371
            V++ K+K++ P++ A+FE+ FG+G+ K+  I+D +     + K G++Y+        G+
Sbjct: 301 SVKIVKNKLAPPFRTAQFELEFGKGICKITEIIDLSIKHKFIAKNGTFYNLNGKNY-HGK 360

Query: 372 DRALQYLKENPALQEEIEKTVQTTL 392
           +   ++LK+N + QEE+ K +Q  L
Sbjct: 361 EALKRFLKQNESDQEELMKKLQDKL 382

[Close]

BLAST of Carg24697 vs. TAIR 10
Match: AT3G10140.1 (RECA homolog 3 )

HSP 1 Score: 207.6 bits (527), Expect = 1.9e-53
Identity = 124/319 (38.87%), Postives = 200/319 (62.70%), Query Frame = 0


Query: 63  DPRSVDRKKALEAAMNDINSSFGKGSVTRLGS-AGGALVETFPSGCLTLDCALG-GGLPK 122
           D +  ++  AL  A++ ++  F K S   L        V    +G L LD ALG GGLPK
Sbjct: 56  DRKVAEKDTALHLALSQLSGDFDKDSKLSLQRFYRKRRVSVISTGSLNLDLALGVGGLPK 115

Query: 123 GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKAVGVDVENLIVCQ 182
           GR+VE++G E+SGKTTLALH I E QKLGG    +DAE+A DP+ ++++GV+ E L++ +
Sbjct: 116 GRMVEVYGKEASGKTTLALHIIKEAQKLGGYCAYLDAENAMDPSLAESIGVNTEELLISR 175

Query: 183 PDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM 242
           P   E  L I D + +SG+VD+I VDSV+AL P+ E++  +G +    Q+R+M+QALRK+
Sbjct: 176 PSSAEKMLNIVDVLTKSGSVDVIVVDSVAALAPQCELDAPVGERYRDTQSRIMTQALRKI 235

Query: 243 SGNASKAGCTLIFLNQIR--YKIGVYYGN-PEVTSGGIALKFFASLRLEIRQTGKLKSAK 302
             +   +   ++FLNQ+R   K  +++ +  EVT GG AL F A++RL++ +TG +K+A 
Sbjct: 236 HYSVGYSQTLIVFLNQVRSHVKSNMHFPHAEEVTCGGNALPFHAAIRLKMIRTGLIKTA- 295

Query: 303 GDEEIGIRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEIMDIVVKKGSWYSY 362
            ++  G+ V V+V K+K++   K++E  I FG G      +L+ A    +++++G+ Y +
Sbjct: 296 -NKISGLNVCVQVVKNKLAPGKKKSELGIHFGHGFYVEREVLELACEHGVILREGTSY-F 355

Query: 363 GDHRLGQGRDRALQYLKEN 377
            +  + +G+D A +YL EN
Sbjct: 356 IEGEVIEGKDAAEKYLVEN 371

[Close]

BLAST of Carg24697 vs. TAIR 10
Match: AT3G32920.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 177.6 bits (449), Expect = 2.1e-44
Identity = 100/202 (49.50%), Postives = 138/202 (68.32%), Query Frame = 0


Query: 100 VETFPSGCLTLDCALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAE 159
           V  F +G   LD ALG GGLPKGR+VEI+GPE+SGKT LALH +        + +L+   
Sbjct: 12  VPVFSTGSFALDVALGVGGLPKGRLVEIYGPEASGKTALALHML--------SMLLI--- 71

Query: 160 HAFDPAYSKAVGVDVENLIVCQPDHGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIE 219
                + +KA+GV+ ENL++ QPD G+ AL + D + +SG+VD+I VDSV+AL P+ E++
Sbjct: 72  ----RSLAKAIGVNTENLLLSQPDCGKQALSLVDTLIQSGSVDVIVVDSVAALVPKGELD 131

Query: 220 GEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALK 279
           GE+G   M +QARLMSQALRK S +   +   LIF+NQ+R + G   G  EVTSGG ALK
Sbjct: 132 GEMGDAHMAIQARLMSQALRKFSHSLLLSQTLLIFINQVRERFG---GPTEVTSGGNALK 191

Query: 280 FFASLRLEIRQTGKLKSAKGDE 301
           F+A +RL+I++ G +K  KG+E
Sbjct: 192 FYAPMRLDIKRIGLIK--KGEE 193

The following BLAST results are available for this feature:

BLAST of Carg24697 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037524.1	2.9e-237	100.00	DNA repair protein recA-like 1, chloroplastic [Cucurbita argyrosperma subsp. arg...	[more]
KAG6608007.1	2.5e-236	99.76	DNA repair protein recA-like 1, chloroplastic, partial [Cucurbita argyrosperma s...	[more]
XP_023524459.1	7.2e-236	99.04	DNA repair protein recA homolog 1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022940951.1	1.2e-235	99.04	DNA repair protein recA homolog 1, chloroplastic [Cucurbita moschata]	[more]
XP_022981737.1	4.7e-235	98.80	DNA repair protein recA homolog 1, chloroplastic [Cucurbita maxima]	[more]

BLAST of Carg24697 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39199	9.6e-175	81.30	DNA repair protein recA homolog 1, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
P48293	1.8e-117	62.01	Protein RecA OS=Arthrospira platensis OX=118562 GN=recA PE=3 SV=1	[more]
Q8DH70	2.5e-114	63.16	Protein RecA OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=recA PE...	[more]
A2CC22	4.7e-113	60.36	Protein RecA OS=Prochlorococcus marinus (strain MIT 9303) OX=59922 GN=recA PE=3 ...	[more]
Q7V547	4.7e-113	60.36	Protein RecA OS=Prochlorococcus marinus (strain MIT 9313) OX=74547 GN=recA PE=3 ...	[more]

BLAST of Carg24697 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FJT7	6.0e-236	99.04	DNA repair protein recA homolog 1, chloroplastic OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1IUU1	2.3e-235	98.80	DNA repair protein recA homolog 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1C5R2	9.9e-223	93.54	DNA repair protein recA homolog 1, chloroplastic OS=Momordica charantia OX=3673 ...	[more]
A0A0A0LBT0	1.6e-217	93.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G524580 PE=3 SV=1	[more]
A0A1S3BAR5	2.1e-217	93.06	DNA repair protein recA homolog 1, chloroplastic isoform X1 OS=Cucumis melo OX=3...	[more]

BLAST of Carg24697 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79050.1	6.8e-176	81.30	recA DNA recombination family protein	[more]
AT1G79050.2	1.2e-140	82.69	recA DNA recombination family protein	[more]
AT2G19490.1	4.1e-80	49.54	recA DNA recombination family protein	[more]
AT3G10140.1	1.9e-53	38.87	RECA homolog 3	[more]
AT3G32920.1	2.1e-44	49.50	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013765	DNA recombination and repair protein RecA	PRINTS	PR00142	RECA	coord: 273..301 score: 45.88 coord: 362..379 score: 50.08 coord: 156..185 score: 60.11 coord: 308..337 score: 49.4 coord: 190..219 score: 66.32 coord: 228..257 score: 62.1
IPR013765	DNA recombination and repair protein RecA	PFAM	PF00154	RecA	coord: 71..333 e-value: 2.6E-117 score: 391.0
IPR013765	DNA recombination and repair protein RecA	TIGRFAM	TIGR02012	TIGR02012	coord: 68..388 e-value: 1.2E-143 score: 476.3
IPR013765	DNA recombination and repair protein RecA	PANTHER	PTHR45900	RECA	coord: 66..411
IPR013765	DNA recombination and repair protein RecA	HAMAP	MF_00268	RecA	coord: 69..394 score: 45.008492
IPR013765	DNA recombination and repair protein RecA	CDD	cd00983	recA	coord: 68..391 e-value: 0.0 score: 517.56
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 120..291 e-value: 1.5E-9 score: 47.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 98..401 e-value: 1.0E-102 score: 345.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 69..332
None	No IPR available	PANTHER	PTHR45900:SF1	MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG	coord: 66..411
IPR020584	DNA recombination/repair protein RecA, conserved site	PROSITE	PS00321	RECA_1	coord: 276..284
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 99..257 score: 28.456177
IPR020587	DNA recombination and repair protein RecA, monomer-monomer interface	PROSITE	PS50163	RECA_3	coord: 262..337 score: 28.31838
IPR023400	DNA recombination and repair protein RecA, C-terminal	SUPERFAMILY	54752	RecA protein, C-terminal domain	coord: 333..389

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24697-RA	Carg24697-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006281	DNA repair
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003677	DNA binding