Carg24691 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTTTGAATTTGCAGGGTTGGGAAGACCTCTTTGATGAACCAGTATCCTGCTTGATCATTGAATTATAACTATGTTATAATGCAACATTTTCCATTCGAGTTTCTTTTTTTGTAGTATCAGTTTCTTGATTCTCCGTGTGGTTTTCTTTAGCTTTGAAAAACAGATATGTGAATAAGAAGTTTAGTAATCAATACAAGGCCACCATTGGAGCTGATTTCTTGACTAAAGAGGTGCAATTCGAAGATAGACTTTTCACTTTGCAGGTTGGTGGTGGGGAGACTTTAATTTGCCCATGAATATGCTCTTTTATTGCTCTAATTTGGTGAATTCCCTTGAATTGATAGTGATCAAAAAGTGCACAAAGGCACCTCAATCTAGTGTGTGTTCATATGGAAAATTTTATGAACTCGATTGATCCATTTGGGAAGATACCAATTTCTTGGATGACCTTTCGAAACGGATACTTGTGTTGTAATCATTTATGAGTAGCAAGAACATGGCTATGAAGGCTGCATTGTTTCGTGTATTGGACTCGGTTTAACCTTGAGTGATTAGATCCCATTTAGTAGCATTTCATTGCCATCTCCTGAGAGCTGTGGCATATAGGTTTAATGTATACCCATGAAGCCAACAAGCAACAAAGAGACTCGATATATCCTGTTAAATGTAATTTATTCCTTTCTGCCTTACAGATATGGGATACAGCAGGCCAGGAACGGTTCCAAAGTCTCGGTGTTGCTTTTTACCGAGGTGCTGATTGCTGCGTTCTGGTGTATGATGTCAATTCAATGAAATCATTTGACAACCTTAACAACTGGCGAGAAGAATTCCTTATACAGGTTTTTTCATCTGTGTTCATTGATTATCTCATTACCAGAAAGCCATTAGAAGAATTCAAATAAGTTGAAAAGAAACCTGAACATCTTTTGACATTTTTGTAAAACCATCTGCAGGCGAGCCCTTCAGACCCGGAAAATTTTCCCTTCGTTGTTTTAGGAAATAAAGTCGACGTTGATGGTGGAAACAGTAGAGTTGTAAGTATTACCTAATTTTCTATACTGTATCATTTCCTCTTTCTATCTCCAGAAGATAGTGAAATGTTCTGTTTTTCTGAATATTTCAGGTTTCAGAGAAAAAGGCACGAGCTTGGTGTGCGTCGAAAGGAAATATTCCATACTTTGAAACGTCTGCCAAAGAAGGCATTAACGTAGAAGAAGCTTTCGAATGCATTGCGAAAAATGCCCTCAAGAGTGGGGAAGAGGAAGAGATGTAAGTTCATATGCCAAACCATAATTTCTGAGAATCAAATATATAATTAACTCTGTCTTTCTGAATTCTATTCTCAGTTATTTGATGTACGCGTACATAAAATACGAAGCAAAGTAACTGTTCGTTACATAATCATGAAATTCACCCAGCAATAACAACTCGAGTTGATATAGGTGTTGATGTTGAGGATTGTTGGGAGAGGAGTCCCACATCGGCTAATAGGGGTTGATCATGGGTTTATAAGTAAAGAATACATTTACTTTGGTATGAGGCCTTTTGGGTAAACTAAAAGCATACCATTGTGGAGGGTCGCGGTTTCTAACATGGTATCGAGCCATGCCCTTAACTTAGCCATGTCAATAGAATCCTCAAATGTTGAAAAAAGAAGTTGTGAGCCCCAAAGGTGTAGTCAAAAGTGACTAAAGTGTCAAACAAAGGGTGTACTTTGTTCGAGGGTTCTAGAGAAGAAGTCGAGCATCAATTAAGGGGAGGCTGTTCGAGGGCTCCATAGGCCTCAGGGGAGGCTCTATGGTGTACTATGTTCAAGGGGAGGATTGTTGAGGATTGTTGGGAGAGGAGTCCCACAAGGATTGATCGGGAGTTTATAAGTAAGGAATACTATCTCCATTGATATGAGGTTTTTTGGGTAAACAAAAAATAAAGTCATGAGAGCTTATGCTCAAAGTGGACAATATCATATCATACTATCGTGGAGAGTCGTGATTCCTAACAGTCGATTGGGAAAACTCACCTGATTTTTTGGTTCCAAGATTGGCATGTGCTTATTGCATGTCGTAGATTGGCAGCATGTGGGCCGGATCCCAAACGCATCGTATAGCTTATAGCGAACATAACGCTGAGCTATAGTTTAGCTCTAGCAGTAGAATTAGTTTGTAATTTTGACCCGAGGCTGTGGATATGTAGAATCTAGTTCTTCCTAAATGGCTGCGTTTCCTAATTGCTCTTCAAAATTCTCTAACTTCGTTGCTTCAAACTTTGTATCATCAATGCTTCATTGGTCCACCTTCTGGCTGTTAACTTTCACTTTCACAAAACCTTTGTTGATTGATGGTTGCCATGTTATTGCAGATACTTACCCGACACGATCGATGTTGCAACCAACAATCAGTCAAGATCATCTGGATGCGACTGCTGA CTTTGAATTTGCAGGGTTGGGAAGACCTCTTTGATGAACCAATATGTGAATAAGAAGTTTAGTAATCAATACAAGGCCACCATTGGAGCTGATTTCTTGACTAAAGAGGTGCAATTCGAAGATAGACTTTTCACTTTGCAGATATGGGATACAGCAGGCCAGGAACGGTTCCAAAGTCTCGGTGTTGCTTTTTACCGAGGTGCTGATTGCTGCGTTCTGGTGTATGATGTCAATTCAATGAAATCATTTGACAACCTTAACAACTGGCGAGAAGAATTCCTTATACAGGCGAGCCCTTCAGACCCGGAAAATTTTCCCTTCGTTGTTTTAGGAAATAAAGTCGACGTTGATGGTGGAAACAGTAGAGTTGTTTCAGAGAAAAAGGCACGAGCTTGGTGTGCGTCGAAAGGAAATATTCCATACTTTGAAACGTCTGCCAAAGAAGGCATTAACGTAGAAGAAGCTTTCGAATGCATTGCGAAAAATGCCCTCAAGAGTGGGGAAGAGGAAGAGATATACTTACCCGACACGATCGATGTTGCAACCAACAATCAGTCAAGATCATCTGGATGCGACTGCTGA ATGAACCAATATGTGAATAAGAAGTTTAGTAATCAATACAAGGCCACCATTGGAGCTGATTTCTTGACTAAAGAGGTGCAATTCGAAGATAGACTTTTCACTTTGCAGATATGGGATACAGCAGGCCAGGAACGGTTCCAAAGTCTCGGTGTTGCTTTTTACCGAGGTGCTGATTGCTGCGTTCTGGTGTATGATGTCAATTCAATGAAATCATTTGACAACCTTAACAACTGGCGAGAAGAATTCCTTATACAGGCGAGCCCTTCAGACCCGGAAAATTTTCCCTTCGTTGTTTTAGGAAATAAAGTCGACGTTGATGGTGGAAACAGTAGAGTTGTTTCAGAGAAAAAGGCACGAGCTTGGTGTGCGTCGAAAGGAAATATTCCATACTTTGAAACGTCTGCCAAAGAAGGCATTAACGTAGAAGAAGCTTTCGAATGCATTGCGAAAAATGCCCTCAAGAGTGGGGAAGAGGAAGAGATATACTTACCCGACACGATCGATGTTGCAACCAACAATCAGTCAAGATCATCTGGATGCGACTGCTGA MNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFECIAKNALKSGEEEEIYLPDTIDVATNNQSRSSGCDC Homology
BLAST of Carg24691 vs. NCBI nr
Match: KAG7022292.1 (Ras-related protein RABG3f [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 377.5 bits (968), Expect = 6.6e-101 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of Carg24691 vs. NCBI nr
Match: XP_022931294.1 (ras-related protein RABG3f [Cucurbita moschata] >KAG6588442.1 Ras-related protein RABG3f, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 377.5 bits (968), Expect = 6.6e-101 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of Carg24691 vs. NCBI nr
Match: XP_023529453.1 (ras-related protein RABG3f isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 375.6 bits (963), Expect = 2.5e-100 Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0
BLAST of Carg24691 vs. NCBI nr
Match: XP_023529452.1 (ras-related protein RABG3f isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 375.6 bits (963), Expect = 2.5e-100 Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0
BLAST of Carg24691 vs. NCBI nr
Match: XP_022971474.1 (ras-related protein Rab7-like [Cucurbita maxima]) HSP 1 Score: 373.2 bits (957), Expect = 1.2e-99 Identity = 180/182 (98.90%), Postives = 180/182 (98.90%), Query Frame = 0
BLAST of Carg24691 vs. ExPASy Swiss-Prot
Match: Q9LS94 (Ras-related protein RABG3f OS=Arabidopsis thaliana OX=3702 GN=RABG3F PE=1 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 1.0e-96 Identity = 167/182 (91.76%), Postives = 177/182 (97.25%), Query Frame = 0
BLAST of Carg24691 vs. ExPASy Swiss-Prot
Match: P31022 (Ras-related protein Rab7 OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 3.0e-96 Identity = 165/182 (90.66%), Postives = 178/182 (97.80%), Query Frame = 0
BLAST of Carg24691 vs. ExPASy Swiss-Prot
Match: Q9XI98 (Ras-related protein RABG3e OS=Arabidopsis thaliana OX=3702 GN=RABG3E PE=2 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 2.4e-93 Identity = 161/182 (88.46%), Postives = 173/182 (95.05%), Query Frame = 0
BLAST of Carg24691 vs. ExPASy Swiss-Prot
Match: O24461 (Ras-related protein Rab7 OS=Prunus armeniaca OX=36596 PE=2 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 6.9e-93 Identity = 163/183 (89.07%), Postives = 173/183 (94.54%), Query Frame = 0
BLAST of Carg24691 vs. ExPASy Swiss-Prot
Match: Q40787 (Ras-related protein Rab7 OS=Cenchrus ciliaris OX=35872 PE=2 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 2.0e-92 Identity = 162/181 (89.50%), Postives = 173/181 (95.58%), Query Frame = 0
BLAST of Carg24691 vs. ExPASy TrEMBL
Match: A0A6J1ETW2 (ras-related protein RABG3f OS=Cucurbita moschata OX=3662 GN=LOC111437519 PE=4 SV=1) HSP 1 Score: 377.5 bits (968), Expect = 3.2e-101 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of Carg24691 vs. ExPASy TrEMBL
Match: A0A6J1I8N5 (ras-related protein Rab7-like OS=Cucurbita maxima OX=3661 GN=LOC111470179 PE=4 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 6.0e-100 Identity = 180/182 (98.90%), Postives = 180/182 (98.90%), Query Frame = 0
BLAST of Carg24691 vs. ExPASy TrEMBL
Match: A0A6J1I650 (ras-related protein Rab7 OS=Cucurbita maxima OX=3661 GN=LOC111471043 PE=4 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 7.9e-100 Identity = 179/182 (98.35%), Postives = 180/182 (98.90%), Query Frame = 0
BLAST of Carg24691 vs. ExPASy TrEMBL
Match: A0A6J1GK85 (ras-related protein Rab7 OS=Cucurbita moschata OX=3662 GN=LOC111455038 PE=4 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 7.9e-100 Identity = 179/182 (98.35%), Postives = 180/182 (98.90%), Query Frame = 0
BLAST of Carg24691 vs. ExPASy TrEMBL
Match: Q6UNT4 (Putative GTP-binding protein OS=Cucumis sativus OX=3659 GN=Rab7b PE=2 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 2.3e-99 Identity = 178/182 (97.80%), Postives = 180/182 (98.90%), Query Frame = 0
BLAST of Carg24691 vs. TAIR 10
Match: AT3G18820.1 (RAB GTPase homolog G3F ) HSP 1 Score: 354.0 bits (907), Expect = 7.3e-98 Identity = 167/182 (91.76%), Postives = 177/182 (97.25%), Query Frame = 0
BLAST of Carg24691 vs. TAIR 10
Match: AT1G49300.1 (RAB GTPase homolog G3E ) HSP 1 Score: 342.8 bits (878), Expect = 1.7e-94 Identity = 161/182 (88.46%), Postives = 173/182 (95.05%), Query Frame = 0
BLAST of Carg24691 vs. TAIR 10
Match: AT1G49300.2 (RAB GTPase homolog G3E ) HSP 1 Score: 342.8 bits (878), Expect = 1.7e-94 Identity = 161/182 (88.46%), Postives = 173/182 (95.05%), Query Frame = 0
BLAST of Carg24691 vs. TAIR 10
Match: AT1G52280.1 (RAB GTPase homolog G3D ) HSP 1 Score: 334.3 bits (856), Expect = 6.0e-92 Identity = 158/182 (86.81%), Postives = 167/182 (91.76%), Query Frame = 0
BLAST of Carg24691 vs. TAIR 10
Match: AT3G16100.1 (RAB GTPase homolog G3C ) HSP 1 Score: 331.6 bits (849), Expect = 3.9e-91 Identity = 155/182 (85.16%), Postives = 170/182 (93.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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