Carg24623 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24623
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein PHLOEM PROTEIN 2-LIKE A9-like
Location	Carg_Chr03: 10308985 .. 10310514 (-)
RNA-Seq Expression	Carg24623
Synteny	Carg24623

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATATTTATTCTGTATGAACATGAAAATGGGAATAAGTTTGAGATTTGGGGTCGCGTGATGCGCTTGAGTTGTGTTGGGAAGAAAGAGATTTGGTTAAAACTTTAACGTTATATTCCTTTTGAACCACGTATATATGTGGAAGGAGCTGCTGCGTATGAGAAACTAAGAGTTGCACATCGGTACGCAGGAGAAAGAAACAAAACATGTATCCATCTACGAGGACAAAGGCGTTCGCAAAAGTAGGTTTTGTTTATTTTTTTCATTTTTGTCTGAAATTCTAATGTTTTTGCTTCATGTATCCATATAAAATATATGATATGGTATGATATGATATGAAATGTTATGATGGCAGATGAAAGGTGAACAAAATGAATGTAAAATATTACCACGCGACCTAAATATAGTATGGGGCTCTGATGAGAATCAGTGGGAGATTAAGCACGGAGAAAAAGGAGAACAAGGGTAAGCAGCAATATTAATTAGAATTAGAATGAATATTAGATTATTTGGGTAGAGAGAATGAATTAATTGAATGGTTGTGGTAGACAGATATGCATTAGCAAAGAAAGTGATGTGGTTTGAAGTAAAAGCGACATACAGGGGAGCAAAAGCAGGGAGAAAATATAAGGTTGGGTTCAATATCAGCTTAGACCGTGATGCGAAAGGATGGGAGGGCAGTCCAGTGTTCATGATGACTACGGTTGGATTCTCAGATGACTACACTTGGAGGAAGCTGTCTCTCGAACACAAGGACAACCTTTCCATGGATGACGTGATCGAAATTCCAGTCTCAGCCAGAGACACCACCCTGCAGTTTGGTCTTTATGAAATCTGGAATGGCAAATGGAAGAATGGCTTGCGCATTCATCATGCTTTTGTTACCCAACTTTGATCCACCTCCCTCCCATCACATCTTTCTCTGTGTGGCCCATCTTTTCTTTTTCTCCGCTCTCTCACCACTACACTTATGTATTACAATCTCAATAATCCACGCAATCTCATTTAAACTCCAGCATTGGTTATGTTCTTCTATTACGCGTTCCATAATCCTCCTTCCTTCATGTAATCTTAATTTATCTCAAATGCTCTAATTTCATCCCTACCACCTGCGTGCCAACCATGAAAAAATTTGCATTTCAATCACATGTCAACTGAAAACGCATAAATTATTCAACCGACTCAACACTTTTTTCCTTTTGCTATTCTTTCTGTGGAACCGTTTCTTCTGTAACTGACCTTTTGTTTTCCTCCCTCCTAGCCTGCCCACACTCTTTTCAAGTCATCTTGAAAGGTAAGCTTCTAGAACTCGAAACCTTCCAAAATTTTGTTTCATTGTTGTTTGCATAGAAATGGAGATGATGCTGAAGAGGAGGAGATCTACCGAATTATATATTATGGTAAACTAAGAATGCGTGTAGCTAATTATTTGTTAATATTATTCTGTAAGCGCGAAAATATTTATGTATATCGATGCCTTGTAACTAATTAAAAGTATATTGATGTACTTTTGAATTGTTCTCATTCAACA

mRNA sequence

AGATATTTATTCTGTATGAACATGAAAATGGGAATAAGTTTGAGATTTGGGGTCGCGTGATGCGCTTGAGTTGTGTTGGGAAGAAAGAGATTTGGTTAAAACTTTAACGTTATATTCCTTTTGAACCACGTATATATGTGGAAGGAGCTGCTGCGTATGAGAAACTAAGAGTTGCACATCGGTACGCAGGAGAAAGAAACAAAACATGTATCCATCTACGAGGACAAAGGCGTTCGCAAAAATGAAAGGTGAACAAAATGAATGTAAAATATTACCACGCGACCTAAATATAGTATGGGGCTCTGATGAGAATCAGTGGGAGATTAAGCACGGAGAAAAAGGAGAACAAGGATATGCATTAGCAAAGAAAGTGATGTGGTTTGAAGTAAAAGCGACATACAGGGGAGCAAAAGCAGGGAGAAAATATAAGGTTGGGTTCAATATCAGCTTAGACCGTGATGCGAAAGGATGGGAGGGCAGTCCAGTGTTCATGATGACTACGGTTGGATTCTCAGATGACTACACTTGGAGGAAGCTGTCTCTCGAACACAAGGACAACCTTTCCATGGATGACGTGATCGAAATTCCAGTCTCAGCCAGAGACACCACCCTGCAGTTTGGTCTTTATGAAATCTGGAATGGCAAATGGAAGAATGGCTTGCGCATTCATCATGCTTTTGTTACCCAACTTTGATCCACCTCCCTCCCATCACATCTTTCTCTGTGTGGCCCATCTTTTCTTTTTCTCCGCTCTCTCACCACTACACTTATGTATTACAATCTCAATAATCCACGCAATCTCATTTAAACTCCAGCATTGGTTATGTTCTTCTATTACGCGTTCCATAATCCTCCTTCCTTCATGTAATCTTAATTTATCTCAAATGCTCTAATTTCATCCCTACCACCTGCGTGCCAACCATGAAAAAATTTGCATTTCAATCACATGTCAACTGAAAACGCATAAATTATTCAACCGACTCAACACTTTTTTCCTTTTGCTATTCTTTCTGTGGAACCGTTTCTTCTGTAACTGACCTTTTGTTTTCCTCCCTCCTAGCCTGCCCACACTCTTTTCAAGTCATCTTGAAAGGTAAGCTTCTAGAACTCGAAACCTTCCAAAATTTTGTTTCATTGTTGTTTGCATAGAAATGGAGATGATGCTGAAGAGGAGGAGATCTACCGAATTATATATTATGGTAAACTAAGAATGCGTGTAGCTAATTATTTGTTAATATTATTCTGTAAGCGCGAAAATATTTATGTATATCGATGCCTTGTAACTAATTAAAAGTATATTGATGTACTTTTGAATTGTTCTCATTCAACA

Coding sequence (CDS)

ATGTATCCATCTACGAGGACAAAGGCGTTCGCAAAAATGAAAGGTGAACAAAATGAATGTAAAATATTACCACGCGACCTAAATATAGTATGGGGCTCTGATGAGAATCAGTGGGAGATTAAGCACGGAGAAAAAGGAGAACAAGGATATGCATTAGCAAAGAAAGTGATGTGGTTTGAAGTAAAAGCGACATACAGGGGAGCAAAAGCAGGGAGAAAATATAAGGTTGGGTTCAATATCAGCTTAGACCGTGATGCGAAAGGATGGGAGGGCAGTCCAGTGTTCATGATGACTACGGTTGGATTCTCAGATGACTACACTTGGAGGAAGCTGTCTCTCGAACACAAGGACAACCTTTCCATGGATGACGTGATCGAAATTCCAGTCTCAGCCAGAGACACCACCCTGCAGTTTGGTCTTTATGAAATCTGGAATGGCAAATGGAAGAATGGCTTGCGCATTCATCATGCTTTTGTTACCCAACTTTGA

Protein sequence

MYPSTRTKAFAKMKGEQNECKILPRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFEVKATYRGAKAGRKYKVGFNISLDRDAKGWEGSPVFMMTTVGFSDDYTWRKLSLEHKDNLSMDDVIEIPVSARDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL

Homology

[Close]

BLAST of Carg24623 vs. NCBI nr
Match: XP_022925595.1 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 [Cucurbita moschata] >KAG6581526.1 Protein PHLOEM PROTEIN 2-LIKE A9, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034819.1 Protein PHLOEM PROTEIN 2-LIKE A9 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 347.8 bits (891), Expect = 5.0e-92
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MYPSTRTKAFAKMKGEQNECKILPRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFE 60
           MYPSTRTKAFAKMKGEQNECKILPRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFE
Sbjct: 1   MYPSTRTKAFAKMKGEQNECKILPRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFE 60

Query: 61  VKATYRGAKAGRKYKVGFNISLDRDAKGWEGSPVFMMTTVGFSDDYTWRKLSLEHKDNLS 120
           VKATYRGAKAGRKYKVGFNISLDRDAKGWEGSPVFMMTTVGFSDDYTWRKLSLEHKDNLS
Sbjct: 61  VKATYRGAKAGRKYKVGFNISLDRDAKGWEGSPVFMMTTVGFSDDYTWRKLSLEHKDNLS 120

Query: 121 MDDVIEIPVSARDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL 163
           MDDVIEIPVSARDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL
Sbjct: 121 MDDVIEIPVSARDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL 162

[Close]

BLAST of Carg24623 vs. NCBI nr
Match: XP_022925596.1 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 334.3 bits (856), Expect = 5.7e-88
Identity = 158/162 (97.53%), Postives = 158/162 (97.53%), Query Frame = 0


Query: 1   MYPSTRTKAFAKMKGEQNECKILPRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFE 60
           MYPSTRT    KMKGEQNECKILPRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFE
Sbjct: 1   MYPSTRT----KMKGEQNECKILPRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFE 60

Query: 61  VKATYRGAKAGRKYKVGFNISLDRDAKGWEGSPVFMMTTVGFSDDYTWRKLSLEHKDNLS 120
           VKATYRGAKAGRKYKVGFNISLDRDAKGWEGSPVFMMTTVGFSDDYTWRKLSLEHKDNLS
Sbjct: 61  VKATYRGAKAGRKYKVGFNISLDRDAKGWEGSPVFMMTTVGFSDDYTWRKLSLEHKDNLS 120

Query: 121 MDDVIEIPVSARDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL 163
           MDDVIEIPVSARDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL
Sbjct: 121 MDDVIEIPVSARDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL 158

[Close]

BLAST of Carg24623 vs. NCBI nr
Match: XP_023545076.1 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 317.0 bits (811), Expect = 9.4e-83
Identity = 151/162 (93.21%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MYPSTRTKAFAKMKGEQNECKILPRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFE 60
           MYPS RTK   + KGEQNE KILPRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFE
Sbjct: 1   MYPSMRTK---QRKGEQNEGKILPRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFE 60

Query: 61  VKATYRGAKAGRKYKVGFNISLDRDAKGWEGSPVFMMTTVGFSDDYTWRKLSLEHKDNLS 120
           VKATYRGAKAGRKYKVGFNISLD DAKGWEGSPVFMMTTVGFSDDYTW+KLSLEHKD LS
Sbjct: 61  VKATYRGAKAGRKYKVGFNISLDPDAKGWEGSPVFMMTTVGFSDDYTWKKLSLEHKDKLS 120

Query: 121 MDDVIEIPVSARDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL 163
           MDD IEIPVSARDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL
Sbjct: 121 MDDEIEIPVSARDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL 159

[Close]

BLAST of Carg24623 vs. NCBI nr
Match: XP_023545077.1 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 316.6 bits (810), Expect = 1.2e-82
Identity = 151/162 (93.21%), Postives = 152/162 (93.83%), Query Frame = 0


Query: 1   MYPSTRTKAFAKMKGEQNECKILPRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFE 60
           MYPS RT    K KGEQNE KILPRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFE
Sbjct: 1   MYPSMRT----KRKGEQNEGKILPRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFE 60

Query: 61  VKATYRGAKAGRKYKVGFNISLDRDAKGWEGSPVFMMTTVGFSDDYTWRKLSLEHKDNLS 120
           VKATYRGAKAGRKYKVGFNISLD DAKGWEGSPVFMMTTVGFSDDYTW+KLSLEHKD LS
Sbjct: 61  VKATYRGAKAGRKYKVGFNISLDPDAKGWEGSPVFMMTTVGFSDDYTWKKLSLEHKDKLS 120

Query: 121 MDDVIEIPVSARDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL 163
           MDD IEIPVSARDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL
Sbjct: 121 MDDEIEIPVSARDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL 158

[Close]

BLAST of Carg24623 vs. NCBI nr
Match: XP_022978965.1 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 256.9 bits (655), Expect = 1.2e-64
Identity = 124/160 (77.50%), Postives = 131/160 (81.88%), Query Frame = 0


Query: 6   RTKAFAKMKGEQNECKILPRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFEVKATY 65
           R K + K+KGE NE KI PRDLNIVWGSDENQWEI HGE    GYALAK+VMWFEVKATY
Sbjct: 3   RVKLYPKVKGEPNEVKISPRDLNIVWGSDENQWEINHGE----GYALAKEVMWFEVKATY 62

Query: 66  RGAKAGRKYKVGFNISLDRDAKGWEGSPVFMMTTVGFSDDYTWRKLSLE---HKDNLSMD 125
           RGAKAGRKYKVGFNISLD DA GWEGSPVFMM TVGFS DY W+KL ++    K +   D
Sbjct: 63  RGAKAGRKYKVGFNISLDHDAHGWEGSPVFMMATVGFSSDYNWKKLYIKKDLQKTDFPND 122

Query: 126 DVIEIPVSARDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL 163
             IEIPVSARDTTLQFGLYEIWNGKWK GLRIHHAFV QL
Sbjct: 123 YEIEIPVSARDTTLQFGLYEIWNGKWKKGLRIHHAFVNQL 158

[Close]

BLAST of Carg24623 vs. ExPASy Swiss-Prot
Match: Q9SA16 (Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana OX=3702 GN=PP2A9 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.0e-23
Identity = 64/178 (35.96%), Postives = 91/178 (51.12%), Query Frame = 0


Query: 4   STRTKAFAKMKGEQNECKIL--PRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFEV 63
           S+  KA +KM+ + N    +  P  LN VWG D   W I    K  +  A  K V W EV
Sbjct: 6   SSHHKADSKMEQDNNRKAWISQPSGLNFVWGGDSRYWVI---PKEPRMPAELKMVSWLEV 65

Query: 64  KATYRGAKAGRKYKVGFNISLDRDAKGWEGSPVFMMTTVGFSDDYTWRKLSLEHKD---- 123
             ++   + G+ Y++GF IS   DA GW+ +PVFM   +G      W+++    ++    
Sbjct: 66  TGSFDKIEPGKTYRIGFKISFKPDATGWDKAPVFMSAKIGKKGKTVWKRIKSVSQNFGIL 125

Query: 124 -------NL--SMDDVIEIPVSA----RDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL 163
                  N+    D + EI VS     +DT LQFGLYE+W G+WK GL IH AFV ++
Sbjct: 126 KGGSEPVNIPDESDGLFEILVSPTALNQDTKLQFGLYEVWTGRWKTGLLIHEAFVQEV 180

[Close]

BLAST of Carg24623 vs. ExPASy TrEMBL
Match: A0A6J1EIJ0 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432981 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.4e-92
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MYPSTRTKAFAKMKGEQNECKILPRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFE 60
           MYPSTRTKAFAKMKGEQNECKILPRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFE
Sbjct: 1   MYPSTRTKAFAKMKGEQNECKILPRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFE 60

Query: 61  VKATYRGAKAGRKYKVGFNISLDRDAKGWEGSPVFMMTTVGFSDDYTWRKLSLEHKDNLS 120
           VKATYRGAKAGRKYKVGFNISLDRDAKGWEGSPVFMMTTVGFSDDYTWRKLSLEHKDNLS
Sbjct: 61  VKATYRGAKAGRKYKVGFNISLDRDAKGWEGSPVFMMTTVGFSDDYTWRKLSLEHKDNLS 120

Query: 121 MDDVIEIPVSARDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL 163
           MDDVIEIPVSARDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL
Sbjct: 121 MDDVIEIPVSARDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL 162

[Close]

BLAST of Carg24623 vs. ExPASy TrEMBL
Match: A0A6J1ECM7 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432981 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 2.8e-88
Identity = 158/162 (97.53%), Postives = 158/162 (97.53%), Query Frame = 0


Query: 1   MYPSTRTKAFAKMKGEQNECKILPRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFE 60
           MYPSTRT    KMKGEQNECKILPRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFE
Sbjct: 1   MYPSTRT----KMKGEQNECKILPRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFE 60

Query: 61  VKATYRGAKAGRKYKVGFNISLDRDAKGWEGSPVFMMTTVGFSDDYTWRKLSLEHKDNLS 120
           VKATYRGAKAGRKYKVGFNISLDRDAKGWEGSPVFMMTTVGFSDDYTWRKLSLEHKDNLS
Sbjct: 61  VKATYRGAKAGRKYKVGFNISLDRDAKGWEGSPVFMMTTVGFSDDYTWRKLSLEHKDNLS 120

Query: 121 MDDVIEIPVSARDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL 163
           MDDVIEIPVSARDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL
Sbjct: 121 MDDVIEIPVSARDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL 158

[Close]

BLAST of Carg24623 vs. ExPASy TrEMBL
Match: A0A6J1IRT7 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478757 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 5.6e-65
Identity = 124/160 (77.50%), Postives = 131/160 (81.88%), Query Frame = 0


Query: 6   RTKAFAKMKGEQNECKILPRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFEVKATY 65
           R K + K+KGE NE KI PRDLNIVWGSDENQWEI HGE    GYALAK+VMWFEVKATY
Sbjct: 3   RVKLYPKVKGEPNEVKISPRDLNIVWGSDENQWEINHGE----GYALAKEVMWFEVKATY 62

Query: 66  RGAKAGRKYKVGFNISLDRDAKGWEGSPVFMMTTVGFSDDYTWRKLSLE---HKDNLSMD 125
           RGAKAGRKYKVGFNISLD DA GWEGSPVFMM TVGFS DY W+KL ++    K +   D
Sbjct: 63  RGAKAGRKYKVGFNISLDHDAHGWEGSPVFMMATVGFSSDYNWKKLYIKKDLQKTDFPND 122

Query: 126 DVIEIPVSARDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL 163
             IEIPVSARDTTLQFGLYEIWNGKWK GLRIHHAFV QL
Sbjct: 123 YEIEIPVSARDTTLQFGLYEIWNGKWKKGLRIHHAFVNQL 158

[Close]

BLAST of Carg24623 vs. ExPASy TrEMBL
Match: A0A6J1IPF8 (protein PHLOEM PROTEIN 2-LIKE A9-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478757 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 3.1e-63
Identity = 121/154 (78.57%), Postives = 128/154 (83.12%), Query Frame = 0


Query: 12  KMKGEQNECKILPRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFEVKATYRGAKAG 71
           ++KGE NE KI PRDLNIVWGSDENQWEI HGE    GYALAK+VMWFEVKATYRGAKAG
Sbjct: 3   RVKGEPNEVKISPRDLNIVWGSDENQWEINHGE----GYALAKEVMWFEVKATYRGAKAG 62

Query: 72  RKYKVGFNISLDRDAKGWEGSPVFMMTTVGFSDDYTWRKLSLE---HKDNLSMDDVIEIP 131
           RKYKVGFNISLD DA GWEGSPVFMM TVGFS DY W+KL ++    K +   D  IEIP
Sbjct: 63  RKYKVGFNISLDHDAHGWEGSPVFMMATVGFSSDYNWKKLYIKKDLQKTDFPNDYEIEIP 122

Query: 132 VSARDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL 163
           VSARDTTLQFGLYEIWNGKWK GLRIHHAFV QL
Sbjct: 123 VSARDTTLQFGLYEIWNGKWKKGLRIHHAFVNQL 152

[Close]

BLAST of Carg24623 vs. ExPASy TrEMBL
Match: A0A0A0KJ41 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538620 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.3e-42
Identity = 90/156 (57.69%), Postives = 106/156 (67.95%), Query Frame = 0


Query: 16  EQNECK---ILPRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFEVKATYRGAKAGR 75
           E +E K   I PRDL IVWGSD+ QW IK     EQ YA A KV W EVKATY+GAK G 
Sbjct: 44  ENHETKLATIPPRDLKIVWGSDDTQWTIKDPNDDEQSYAEAIKVTWLEVKATYKGAKPGS 103

Query: 76  KYKVGFNISLDRDAKGWEGSPVFMMTTVGFSDDYTWRKLSL------EHKDNLSMDDVIE 135
            YK+GFNISL+ DA GW+ SPVFMM  VG S  YTW+++        +   N   +  I 
Sbjct: 104 HYKIGFNISLNSDAFGWDSSPVFMMAKVGESGYYTWKRIYFNIIEAGKSPINFPSNFEIS 163

Query: 136 IPVSARDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL 163
           +PVSA+DTTL FGLYEIW G+WK GLRIHHAFVT++
Sbjct: 164 VPVSAKDTTLFFGLYEIWGGRWKGGLRIHHAFVTKI 199

[Close]

BLAST of Carg24623 vs. TAIR 10
Match: AT1G31200.1 (phloem protein 2-A9 )

HSP 1 Score: 111.3 bits (277), Expect = 7.3e-25
Identity = 64/178 (35.96%), Postives = 91/178 (51.12%), Query Frame = 0


Query: 4   STRTKAFAKMKGEQNECKIL--PRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFEV 63
           S+  KA +KM+ + N    +  P  LN VWG D   W I    K  +  A  K V W EV
Sbjct: 6   SSHHKADSKMEQDNNRKAWISQPSGLNFVWGGDSRYWVI---PKEPRMPAELKMVSWLEV 65

Query: 64  KATYRGAKAGRKYKVGFNISLDRDAKGWEGSPVFMMTTVGFSDDYTWRKLSLEHKD---- 123
             ++   + G+ Y++GF IS   DA GW+ +PVFM   +G      W+++    ++    
Sbjct: 66  TGSFDKIEPGKTYRIGFKISFKPDATGWDKAPVFMSAKIGKKGKTVWKRIKSVSQNFGIL 125

Query: 124 -------NL--SMDDVIEIPVSA----RDTTLQFGLYEIWNGKWKNGLRIHHAFVTQL 163
                  N+    D + EI VS     +DT LQFGLYE+W G+WK GL IH AFV ++
Sbjct: 126 KGGSEPVNIPDESDGLFEILVSPTALNQDTKLQFGLYEVWTGRWKTGLLIHEAFVQEV 180

[Close]

BLAST of Carg24623 vs. TAIR 10
Match: AT1G10155.1 (phloem protein 2-A10 )

HSP 1 Score: 109.4 bits (272), Expect = 2.8e-24
Identity = 59/157 (37.58%), Postives = 80/157 (50.96%), Query Frame = 0


Query: 24  PRDLNIVWGSDENQWEIKHGEKGEQGYALAKKVMWFEVKATYRGAKAGRKYKVGFNISLD 83
           P  LN +WG D   W I + ++     A  KKV W EV  +Y   + G+ Y++GF IS  
Sbjct: 31  PSGLNFIWGGDSRYWVIPNEDRTP---AELKKVSWLEVTGSYDKIEPGKTYRIGFKISFT 90

Query: 84  RDAKGWEGSPVFMMTTVGFSDDYTWRKLSLEHK--DNL-----------SMDDVIEIPVS 143
            DA GW+ +PVFM   +G      W+++   +   D L             D   EI VS
Sbjct: 91  ADATGWDQAPVFMSAKIGKKGRTIWKRIKSVNNNFDKLKGGTGPVNIPDETDGRFEIFVS 150

Query: 144 AR-----DTTLQFGLYEIWNGKWKNGLRIHHAFVTQL 163
            +     DT LQFGLYE+W GKWK GL I+ AFV ++
Sbjct: 151 PKVAINQDTKLQFGLYEVWTGKWKTGLLIYEAFVEEV 184

The following BLAST results are available for this feature:

BLAST of Carg24623 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925595.1	5.0e-92	100.00	protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 [Cucurbita moschata] >KAG658152...	[more]
XP_022925596.1	5.7e-88	97.53	protein PHLOEM PROTEIN 2-LIKE A9-like isoform X2 [Cucurbita moschata]	[more]
XP_023545076.1	9.4e-83	93.21	protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023545077.1	1.2e-82	93.21	protein PHLOEM PROTEIN 2-LIKE A9-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022978965.1	1.2e-64	77.50	protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg24623 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SA16	1.0e-23	35.96	Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana OX=3702 GN=PP2A9 PE=2 S...	[more]

BLAST of Carg24623 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EIJ0	2.4e-92	100.00	protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1ECM7	2.8e-88	97.53	protein PHLOEM PROTEIN 2-LIKE A9-like isoform X2 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1IRT7	5.6e-65	77.50	protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1IPF8	3.1e-63	78.57	protein PHLOEM PROTEIN 2-LIKE A9-like isoform X2 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A0A0KJ41	2.3e-42	57.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538620 PE=4 SV=1	[more]

BLAST of Carg24623 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31200.1	7.3e-25	35.96	phloem protein 2-A9	[more]
AT1G10155.1	2.8e-24	37.58	phloem protein 2-A10	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 22..157 e-value: 3.9E-17 score: 62.7
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 12..159
None	No IPR available	PANTHER	PTHR32278:SF2	PROTEIN PHLOEM PROTEIN 2-LIKE A9	coord: 12..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24623-RA	Carg24623-RA	mRNA