Carg24556 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24556
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	APO protein 3, mitochondrial-like
Location	Carg_Chr11: 53243 .. 55843 (+)
RNA-Seq Expression	Carg24556
Synteny	Carg24556

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTTCCTCGTTTCCGGTCCGCTTGAGGTTCGCACTTGCAGTGAGTCACGAATTCGTCCCAAACTCTCGAATGCTGCGACAGACCAGCGCGTTCGTCCAAAGGGGTCCACTTATTCCTCTGAATCCATTTCACCGATCCTTCAAGTTCACCCAGACGGCAGAGAAATTTGAACTTCCTGACGCTCCTGATCCCTCATATGTAGATTTGCCCAGACCCCGTGAGCGGAAGTCCGACAGAAAACCGTTTCCCACTCCTATGAAGCTTTTGATTCGAAGAGCAAAAGAGGAGAGAGAAGCCAGAAATGCGCAGCCTTGTAGGATGCTCGAAGACCCCCCCGACAATGGATTGCTGGTGCCTGATCTTGTCGATGTAGCTCAAAATGTGTACCTAGCTTGGAACTCCCTCCGCTTCGGCATATCAAAACTCTTGGAGGTCATTCCCATTCAAAGATGCAGGTGCCTGTTGTATAATTTCTATCTTTGACGTATTCTCCACCATGTCTGAATGATCCTTCTTATCCCTTGCCTACCCTGAACTATAATTATATTTGCAAGGACTATTGCGTAACTAGTGGTTAATAGGAGTTGAAAGGACCCCTTGCCTAGAGAACTTTGTTTAGAGGACAGTGAGTTAATATGGTTGTCTGGTTAATTTGGTTTAGAGGACAGTGAGTTTTAATTTGAGGTACCATGTTTGGTTGGAAAGGAAGGCTAAACAACTTTGTTTGTGCTGAGTTCAGCTATTCTCTAGGGTCTGTATTTTACTAGGATGCATATTATCCATTGGGACCTTTAACCCCCACCACCCCCACCATGTGATATCCCAGGTTGGTTAGGAAGGAGAACGAAACACCCTTTATTTATAAGAAGAGTGTGGAAACCTTTCTCTAGCATACGTGTCATGGAGAAGCCTACAAGGGAAAGTCCAAAAAAAATCTCGAGGTGAAGCCCGGAAGGGAAAGCCGAAAGAGGACAGTATCTGGATGAGCACTGGTTCAGTTGTGTAACTCTAGAAGGCGCGTTTTAAAGTCTTGAGGGGAAGCCCGAAAGTGAAAGTCCAAAAAGGACAATATCTGCTAGCGGCGGGGTTGTGCCGTTACATAAATTCATTAAAGTGTGTACCATGTTTTAAGTGCAATGTTGTAACTTATACAATCTCCCCCATCGTTGTTGGCTAATTAACTTGCTGATGATTGTTCTCCTTAGGTTTTGCTTCGAGGTTCATATTGGACATGTAGGTCATGAAATTAGAACTTGCAATGGTCCAAAGAGTGGGCTTCGAAGTGCTACTCACGTTTGGAGAAAGGGAGGAGCTCAAGACGTGGTTTTTTTCCCCAAGTGTTACCATCTTTATGATCGTGTAGGGAAACCAAGAGTTGGGCACGAGGAGAGGTATGTGATACCAAGGATACCTGCTCTATTGGAGCTTTGCATCCAAGCTGGTGTTGATCTTGAGAAATACCCTTCTAAAAGACGAACAAAACCTGTGTACAGTATTGAAGGGAGAATTGTAGATTTCGAGTCGGTGAAGGAAACGAATGAGGTGAAAACAGGCGTTTCTGTAAAGCCTGATCATGGGATAGAACATGAAGGAGGCAGCAGGTGTTCATTCTCATGGAAAATTAGTAACACATTGGACCAACAACATGAAGAGAACAGGGAGTTAAGGAAGTTAAGCATCATGACACTAAACTCGTGGGTTGAAATGGTATCCGGAGCAAAGAAAATAATGGAAAAGTATAGGGTGCAGACATGTGGATACTGTCCCGAGGTCCAGGTTGGTCCTAAGGGGCATAAGGTGAGAATATGTCGAGCTTCAAAGCATCAGTCTCGCAACGGGTTGCATGCATGGCAGGAGGCAACGATAGACGATATTGTGGGTCCAAATCATGTATGGCATGTCAGAGATTTGAAGGGGCCTCCTTTGGATAACAAGTTGAAAAGATTTTACGGCAAAGTTCCTGCTGTTGTAGAGCTGTGCCTGCAAGCAGGAGCACCTATTCCAGATCAATATAGGAGCATGCTGAGGCTAGATGTGGTTCCCCCACACCCTGATGAAGTGGATCTCGTTGCTTGACGTTGCTCTTGATCGTTGCCTCACATTTAGAAAGGCGGCATTGAATGGCCAACGTGTGGAGTTGGAGACCCAATTTGATGGTTGAACTGCACCGACTTCGTATGGATATCGGGTGGTTTGGTTGTAGCTTGGTATTGGTTACTCTAGTTGGCTGGTGATTTCATGTTTGAGAATCCGTGCGAGACATTCTGTGTATGTAGTTCCCAGGACTACACGACTCGCTCAGGACCATGTACTTTAGTGAGATGTGTAACTTTGTTTTTGTCCCGTCAAAATTGAAACCCGTAAATATTGAGACAAACTAATATGTACTCTACATTCTAAATTTGTTATTAACCATACTTACTAGAATGCACTGTATTACTTACTAGAATGCACTGTTTTAGCGGAATAAGCAGACTTGGTGCTTTCCTCAGATCAACCAATATCATAGCAATATCATATTTATAGCATTATGAATTTGAATTTGTTTGCTTCTTGATGATATCTTCACCTGATTTACTTGCATGCTTGTGAATTAAGTCT

mRNA sequence

ACTTCCTCGTTTCCGGTCCGCTTGAGGTTCGCACTTGCAGTGAGTCACGAATTCGTCCCAAACTCTCGAATGCTGCGACAGACCAGCGCGTTCGTCCAAAGGGGTCCACTTATTCCTCTGAATCCATTTCACCGATCCTTCAAGTTCACCCAGACGGCAGAGAAATTTGAACTTCCTGACGCTCCTGATCCCTCATATGTAGATTTGCCCAGACCCCGTGAGCGGAAGTCCGACAGAAAACCGTTTCCCACTCCTATGAAGCTTTTGATTCGAAGAGCAAAAGAGGAGAGAGAAGCCAGAAATGCGCAGCCTTGTAGGATGCTCGAAGACCCCCCCGACAATGGATTGCTGGTGCCTGATCTTGTCGATGTAGCTCAAAATGTGTACCTAGCTTGGAACTCCCTCCGCTTCGGCATATCAAAACTCTTGGAGGTCATTCCCATTCAAAGATGCAGGTTTTGCTTCGAGGTTCATATTGGACATGTAGGTCATGAAATTAGAACTTGCAATGGTCCAAAGAGTGGGCTTCGAAGTGCTACTCACGTTTGGAGAAAGGGAGGAGCTCAAGACGTGGTTTTTTTCCCCAAGTGTTACCATCTTTATGATCGTGTAGGGAAACCAAGAGTTGGGCACGAGGAGAGGTATGTGATACCAAGGATACCTGCTCTATTGGAGCTTTGCATCCAAGCTGGTGTTGATCTTGAGAAATACCCTTCTAAAAGACGAACAAAACCTGTGTACAGTATTGAAGGGAGAATTGTAGATTTCGAGTCGGTGAAGGAAACGAATGAGGTGAAAACAGGCGTTTCTGTAAAGCCTGATCATGGGATAGAACATGAAGGAGGCAGCAGGTGTTCATTCTCATGGAAAATTAGTAACACATTGGACCAACAACATGAAGAGAACAGGGAGTTAAGGAAGTTAAGCATCATGACACTAAACTCGTGGGTTGAAATGGTATCCGGAGCAAAGAAAATAATGGAAAAGTATAGGGTGCAGACATGTGGATACTGTCCCGAGGTCCAGGTTGGTCCTAAGGGGCATAAGGTGAGAATATGTCGAGCTTCAAAGCATCAGTCTCGCAACGGGTTGCATGCATGGCAGGAGGCAACGATAGACGATATTGTGGGTCCAAATCATGTATGGCATGTCAGAGATTTGAAGGGGCCTCCTTTGGATAACAAGTTGAAAAGATTTTACGGCAAAGTTCCTGCTGTTGTAGAGCTGTGCCTGCAAGCAGGAGCACCTATTCCAGATCAATATAGGAGCATGCTGAGGCTAGATGTGGTTCCCCCACACCCTGATGAAGTGGATCTCGTTGCTTGACGTTGCTCTTGATCGTTGCCTCACATTTAGAAAGGCGGCATTGAATGGCCAACGTGTGGAGTTGGAGACCCAATTTGATGGTTGAACTGCACCGACTTCGTATGGATATCGGGTGGTTTGGTTGTAGCTTGGTATTGGTTACTCTAGTTGGCTGGTGATTTCATGTTTGAGAATCCGTGCGAGACATTCTGTGTATGTAGTTCCCAGGACTACACGACTCGCTCAGGACCATGTACTTTAGTGAGATGTGTAACTTTGTTTTTGTCCCGTCAAAATTGAAACCCGTAAATATTGAGACAAACTAATATGTACTCTACATTCTAAATTTGTTATTAACCATACTTACTAGAATGCACTGTATTACTTACTAGAATGCACTGTTTTAGCGGAATAAGCAGACTTGGTGCTTTCCTCAGATCAACCAATATCATAGCAATATCATATTTATAGCATTATGAATTTGAATTTGTTTGCTTCTTGATGATATCTTCACCTGATTTACTTGCATGCTTGTGAATTAAGTCT

Coding sequence (CDS)

ATGCTGCGACAGACCAGCGCGTTCGTCCAAAGGGGTCCACTTATTCCTCTGAATCCATTTCACCGATCCTTCAAGTTCACCCAGACGGCAGAGAAATTTGAACTTCCTGACGCTCCTGATCCCTCATATGTAGATTTGCCCAGACCCCGTGAGCGGAAGTCCGACAGAAAACCGTTTCCCACTCCTATGAAGCTTTTGATTCGAAGAGCAAAAGAGGAGAGAGAAGCCAGAAATGCGCAGCCTTGTAGGATGCTCGAAGACCCCCCCGACAATGGATTGCTGGTGCCTGATCTTGTCGATGTAGCTCAAAATGTGTACCTAGCTTGGAACTCCCTCCGCTTCGGCATATCAAAACTCTTGGAGGTCATTCCCATTCAAAGATGCAGGTTTTGCTTCGAGGTTCATATTGGACATGTAGGTCATGAAATTAGAACTTGCAATGGTCCAAAGAGTGGGCTTCGAAGTGCTACTCACGTTTGGAGAAAGGGAGGAGCTCAAGACGTGGTTTTTTTCCCCAAGTGTTACCATCTTTATGATCGTGTAGGGAAACCAAGAGTTGGGCACGAGGAGAGGTATGTGATACCAAGGATACCTGCTCTATTGGAGCTTTGCATCCAAGCTGGTGTTGATCTTGAGAAATACCCTTCTAAAAGACGAACAAAACCTGTGTACAGTATTGAAGGGAGAATTGTAGATTTCGAGTCGGTGAAGGAAACGAATGAGGTGAAAACAGGCGTTTCTGTAAAGCCTGATCATGGGATAGAACATGAAGGAGGCAGCAGGTGTTCATTCTCATGGAAAATTAGTAACACATTGGACCAACAACATGAAGAGAACAGGGAGTTAAGGAAGTTAAGCATCATGACACTAAACTCGTGGGTTGAAATGGTATCCGGAGCAAAGAAAATAATGGAAAAGTATAGGGTGCAGACATGTGGATACTGTCCCGAGGTCCAGGTTGGTCCTAAGGGGCATAAGGTGAGAATATGTCGAGCTTCAAAGCATCAGTCTCGCAACGGGTTGCATGCATGGCAGGAGGCAACGATAGACGATATTGTGGGTCCAAATCATGTATGGCATGTCAGAGATTTGAAGGGGCCTCCTTTGGATAACAAGTTGAAAAGATTTTACGGCAAAGTTCCTGCTGTTGTAGAGCTGTGCCTGCAAGCAGGAGCACCTATTCCAGATCAATATAGGAGCATGCTGAGGCTAGATGTGGTTCCCCCACACCCTGATGAAGTGGATCTCGTTGCTTGA

Protein sequence

MLRQTSAFVQRGPLIPLNPFHRSFKFTQTAEKFELPDAPDPSYVDLPRPRERKSDRKPFPTPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKLLEVIPIQRCRFCFEVHIGHVGHEIRTCNGPKSGLRSATHVWRKGGAQDVVFFPKCYHLYDRVGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFESVKETNEVKTGVSVKPDHGIEHEGGSRCSFSWKISNTLDQQHEENRELRKLSIMTLNSWVEMVSGAKKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDIVGPNHVWHVRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYRSMLRLDVVPPHPDEVDLVA

Homology

[Close]

BLAST of Carg24556 vs. NCBI nr
Match: KAG6587392.1 (APO protein 3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021376.1 APO protein 3, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 878.2 bits (2268), Expect = 2.7e-251
Identity = 418/418 (100.00%), Postives = 418/418 (100.00%), Query Frame = 0


Query: 1   MLRQTSAFVQRGPLIPLNPFHRSFKFTQTAEKFELPDAPDPSYVDLPRPRERKSDRKPFP 60
           MLRQTSAFVQRGPLIPLNPFHRSFKFTQTAEKFELPDAPDPSYVDLPRPRERKSDRKPFP
Sbjct: 1   MLRQTSAFVQRGPLIPLNPFHRSFKFTQTAEKFELPDAPDPSYVDLPRPRERKSDRKPFP 60

Query: 61  TPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKLL 120
           TPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKLL
Sbjct: 61  TPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKLL 120

Query: 121 EVIPIQRCRFCFEVHIGHVGHEIRTCNGPKSGLRSATHVWRKGGAQDVVFFPKCYHLYDR 180
           EVIPIQRCRFCFEVHIGHVGHEIRTCNGPKSGLRSATHVWRKGGAQDVVFFPKCYHLYDR
Sbjct: 121 EVIPIQRCRFCFEVHIGHVGHEIRTCNGPKSGLRSATHVWRKGGAQDVVFFPKCYHLYDR 180

Query: 181 VGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFESVKETN 240
           VGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFESVKETN
Sbjct: 181 VGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFESVKETN 240

Query: 241 EVKTGVSVKPDHGIEHEGGSRCSFSWKISNTLDQQHEENRELRKLSIMTLNSWVEMVSGA 300
           EVKTGVSVKPDHGIEHEGGSRCSFSWKISNTLDQQHEENRELRKLSIMTLNSWVEMVSGA
Sbjct: 241 EVKTGVSVKPDHGIEHEGGSRCSFSWKISNTLDQQHEENRELRKLSIMTLNSWVEMVSGA 300

Query: 301 KKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDIVGPNHVWH 360
           KKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDIVGPNHVWH
Sbjct: 301 KKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDIVGPNHVWH 360

Query: 361 VRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYRSMLRLDVVPPHPDEVDLVA 419
           VRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYRSMLRLDVVPPHPDEVDLVA
Sbjct: 361 VRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYRSMLRLDVVPPHPDEVDLVA 418

[Close]

BLAST of Carg24556 vs. NCBI nr
Match: XP_022928867.1 (APO protein 3, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 876.3 bits (2263), Expect = 1.0e-250
Identity = 417/418 (99.76%), Postives = 417/418 (99.76%), Query Frame = 0


Query: 1   MLRQTSAFVQRGPLIPLNPFHRSFKFTQTAEKFELPDAPDPSYVDLPRPRERKSDRKPFP 60
           MLRQT AFVQRGPLIPLNPFHRSFKFTQTAEKFELPDAPDPSYVDLPRPRERKSDRKPFP
Sbjct: 1   MLRQTRAFVQRGPLIPLNPFHRSFKFTQTAEKFELPDAPDPSYVDLPRPRERKSDRKPFP 60

Query: 61  TPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKLL 120
           TPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKLL
Sbjct: 61  TPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKLL 120

Query: 121 EVIPIQRCRFCFEVHIGHVGHEIRTCNGPKSGLRSATHVWRKGGAQDVVFFPKCYHLYDR 180
           EVIPIQRCRFCFEVHIGHVGHEIRTCNGPKSGLRSATHVWRKGGAQDVVFFPKCYHLYDR
Sbjct: 121 EVIPIQRCRFCFEVHIGHVGHEIRTCNGPKSGLRSATHVWRKGGAQDVVFFPKCYHLYDR 180

Query: 181 VGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFESVKETN 240
           VGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFESVKETN
Sbjct: 181 VGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFESVKETN 240

Query: 241 EVKTGVSVKPDHGIEHEGGSRCSFSWKISNTLDQQHEENRELRKLSIMTLNSWVEMVSGA 300
           EVKTGVSVKPDHGIEHEGGSRCSFSWKISNTLDQQHEENRELRKLSIMTLNSWVEMVSGA
Sbjct: 241 EVKTGVSVKPDHGIEHEGGSRCSFSWKISNTLDQQHEENRELRKLSIMTLNSWVEMVSGA 300

Query: 301 KKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDIVGPNHVWH 360
           KKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDIVGPNHVWH
Sbjct: 301 KKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDIVGPNHVWH 360

Query: 361 VRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYRSMLRLDVVPPHPDEVDLVA 419
           VRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYRSMLRLDVVPPHPDEVDLVA
Sbjct: 361 VRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYRSMLRLDVVPPHPDEVDLVA 418

[Close]

BLAST of Carg24556 vs. NCBI nr
Match: XP_023531657.1 (APO protein 3, mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 869.4 bits (2245), Expect = 1.3e-248
Identity = 414/418 (99.04%), Postives = 415/418 (99.28%), Query Frame = 0


Query: 1   MLRQTSAFVQRGPLIPLNPFHRSFKFTQTAEKFELPDAPDPSYVDLPRPRERKSDRKPFP 60
           MLRQTSAFVQRGPLIPLN FHRSFKFTQTAEKFELPDAPDPSYVDLPRPRERKSDRKPFP
Sbjct: 1   MLRQTSAFVQRGPLIPLNQFHRSFKFTQTAEKFELPDAPDPSYVDLPRPRERKSDRKPFP 60

Query: 61  TPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKLL 120
           TPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKLL
Sbjct: 61  TPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKLL 120

Query: 121 EVIPIQRCRFCFEVHIGHVGHEIRTCNGPKSGLRSATHVWRKGGAQDVVFFPKCYHLYDR 180
           EVIPIQRCRFCFEVHIGHVGHEIRTC GPKSGLRSATHVWRKGGAQDVVFFPKCYHLYDR
Sbjct: 121 EVIPIQRCRFCFEVHIGHVGHEIRTCTGPKSGLRSATHVWRKGGAQDVVFFPKCYHLYDR 180

Query: 181 VGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFESVKETN 240
           VGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFE VKETN
Sbjct: 181 VGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFELVKETN 240

Query: 241 EVKTGVSVKPDHGIEHEGGSRCSFSWKISNTLDQQHEENRELRKLSIMTLNSWVEMVSGA 300
           EVKTGVSVKPDHGIEHEGGSRCSFSWKISNTLDQQHEEN+ELRKLSIMTLNSWVEMVSGA
Sbjct: 241 EVKTGVSVKPDHGIEHEGGSRCSFSWKISNTLDQQHEENKELRKLSIMTLNSWVEMVSGA 300

Query: 301 KKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDIVGPNHVWH 360
           KKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDIVGPNHVWH
Sbjct: 301 KKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDIVGPNHVWH 360

Query: 361 VRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYRSMLRLDVVPPHPDEVDLVA 419
           VRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYRSMLRLDVVPPHPDEVDLVA
Sbjct: 361 VRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYRSMLRLDVVPPHPDEVDLVA 418

[Close]

BLAST of Carg24556 vs. NCBI nr
Match: XP_023531656.1 (APO protein 3, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 864.0 bits (2231), Expect = 5.3e-247
Identity = 414/421 (98.34%), Postives = 415/421 (98.57%), Query Frame = 0


Query: 1   MLRQTSAFVQRGPLIPLNPFHRSFKFTQTAEKFELPDAPDPSYVDLPRPRERKSDRKPFP 60
           MLRQTSAFVQRGPLIPLN FHRSFKFTQTAEKFELPDAPDPSYVDLPRPRERKSDRKPFP
Sbjct: 1   MLRQTSAFVQRGPLIPLNQFHRSFKFTQTAEKFELPDAPDPSYVDLPRPRERKSDRKPFP 60

Query: 61  TPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKLL 120
           TPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKLL
Sbjct: 61  TPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKLL 120

Query: 121 EVIPIQRCR---FCFEVHIGHVGHEIRTCNGPKSGLRSATHVWRKGGAQDVVFFPKCYHL 180
           EVIPIQRCR   FCFEVHIGHVGHEIRTC GPKSGLRSATHVWRKGGAQDVVFFPKCYHL
Sbjct: 121 EVIPIQRCRCLLFCFEVHIGHVGHEIRTCTGPKSGLRSATHVWRKGGAQDVVFFPKCYHL 180

Query: 181 YDRVGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFESVK 240
           YDRVGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFE VK
Sbjct: 181 YDRVGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFELVK 240

Query: 241 ETNEVKTGVSVKPDHGIEHEGGSRCSFSWKISNTLDQQHEENRELRKLSIMTLNSWVEMV 300
           ETNEVKTGVSVKPDHGIEHEGGSRCSFSWKISNTLDQQHEEN+ELRKLSIMTLNSWVEMV
Sbjct: 241 ETNEVKTGVSVKPDHGIEHEGGSRCSFSWKISNTLDQQHEENKELRKLSIMTLNSWVEMV 300

Query: 301 SGAKKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDIVGPNH 360
           SGAKKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDIVGPNH
Sbjct: 301 SGAKKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDIVGPNH 360

Query: 361 VWHVRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYRSMLRLDVVPPHPDEVDLV 419
           VWHVRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYRSMLRLDVVPPHPDEVDLV
Sbjct: 361 VWHVRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYRSMLRLDVVPPHPDEVDLV 420

[Close]

BLAST of Carg24556 vs. NCBI nr
Match: XP_022974293.1 (APO protein 3, mitochondrial [Cucurbita maxima])

HSP 1 Score: 862.4 bits (2227), Expect = 1.5e-246
Identity = 412/418 (98.56%), Postives = 412/418 (98.56%), Query Frame = 0


Query: 1   MLRQTSAFVQRGPLIPLNPFHRSFKFTQTAEKFELPDAPDPSYVDLPRPRERKSDRKPFP 60
           MLRQTSAFVQRGPLIPLNPFHRSFKFT TAEKFELPDAPDPSYVDLPRPRERKSDRKPFP
Sbjct: 149 MLRQTSAFVQRGPLIPLNPFHRSFKFTHTAEKFELPDAPDPSYVDLPRPRERKSDRKPFP 208

Query: 61  TPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKLL 120
           TPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKLL
Sbjct: 209 TPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKLL 268

Query: 121 EVIPIQRCRFCFEVHIGHVGHEIRTCNGPKSGLRSATHVWRKGGAQDVVFFPKCYHLYDR 180
           EVIPIQRCRFCFEVHIGHVGHEIRTC GPKSGLRSATHVWRKGGAQDVVFFPKCYHLYDR
Sbjct: 269 EVIPIQRCRFCFEVHIGHVGHEIRTCTGPKSGLRSATHVWRKGGAQDVVFFPKCYHLYDR 328

Query: 181 VGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFESVKETN 240
           VGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFESVKETN
Sbjct: 329 VGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFESVKETN 388

Query: 241 EVKTGVSVKPDHGIEHEGGSRCSFSWKISNTLDQQHEENRELRKLSIMTLNSWVEMVSGA 300
           EVKTGVSVKPD GIEHEGGSRCSFSWKISNTLDQQHEENREL KLSIMTLNSWVEMVSGA
Sbjct: 389 EVKTGVSVKPDLGIEHEGGSRCSFSWKISNTLDQQHEENRELMKLSIMTLNSWVEMVSGA 448

Query: 301 KKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDIVGPNHVWH 360
           KKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDIVGPNHVWH
Sbjct: 449 KKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDIVGPNHVWH 508

Query: 361 VRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYRSMLRLDVVPPHPDEVDLVA 419
            RDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIP QYRSMLRLDVVPPHPDEVDLVA
Sbjct: 509 ARDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPYQYRSMLRLDVVPPHPDEVDLVA 566

[Close]

BLAST of Carg24556 vs. ExPASy Swiss-Prot
Match: Q9FH50 (APO protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO3 PE=2 SV=1)

HSP 1 Score: 507.7 bits (1306), Expect = 1.3e-142
Identity = 240/384 (62.50%), Postives = 289/384 (75.26%), Query Frame = 0


Query: 40  DPSYVDLPRPRERKSDRKPFPTPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLV 99
           DP Y D+P+P + KS+RKP+PTPMK LIRRAKEE++ R  QPCR+LEDPPDNGLLVP+LV
Sbjct: 40  DPLYADVPKPPKDKSERKPYPTPMKELIRRAKEEKQLRKLQPCRVLEDPPDNGLLVPELV 99

Query: 100 DVAQNVYLAWNSLRFGISKLLEVIPIQRCRFCFEVHIGHVGHEIRTCNGPKSGLRSATHV 159
           DVA  V+   N L  G+SK++  +P+ RCR C EVHIG  GHEIRTC GP SG RSATHV
Sbjct: 100 DVAHCVHRCRNMLLSGLSKIIHHVPVHRCRLCAEVHIGKQGHEIRTCTGPGSGSRSATHV 159

Query: 160 WRKGGAQDVVFFPKCYHLYDRVGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRR 219
           W++G   DVV FPKC+HLYDR  KPRV H+ER+ +P+I A+LELCIQAGVDLEK+PSKRR
Sbjct: 160 WKRGRVSDVVLFPKCFHLYDRAVKPRVIHDERFTVPKISAVLELCIQAGVDLEKFPSKRR 219

Query: 220 TKPVYSIEGRIVDFESVKETNE----VKTGVSVKPDHGIEHEGGSRCSFSWKISNTLDQQ 279
           +KPVYSIEGRIVDFE V + N       T   ++ D                     D+ 
Sbjct: 220 SKPVYSIEGRIVDFEDVNDGNSELAVTSTTTLIQED---------------------DRC 279

Query: 280 HEENRELRKLSIMTLNSWVEMVSGAKKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKH 339
            EE + L++LS  T+ SW EMV G +K+ME+YRV TCGYCPE+QVGPKGHKVR+C+A+KH
Sbjct: 280 KEEKKSLKELSFETMESWFEMVLGVRKLMERYRVWTCGYCPEIQVGPKGHKVRMCKATKH 339

Query: 340 QSRNGLHAWQEATIDDIVGPNHVWHVRD-LKGPPLDNKLKRFYGKVPAVVELCLQAGAPI 399
           Q R+G+HAWQEATIDD+VGP +VWHVRD   G  LDN LKRFYGK PAV+E+C+Q GAP+
Sbjct: 340 QMRDGMHAWQEATIDDVVGPTYVWHVRDPTDGSVLDNSLKRFYGKAPAVIEMCVQGGAPV 399

Query: 400 PDQYRSMLRLDVVPPHPDEVDLVA 419
           PDQY SM+RLDVV P  DEVDLVA
Sbjct: 400 PDQYNSMMRLDVVYPQRDEVDLVA 402

[Close]

BLAST of Carg24556 vs. ExPASy Swiss-Prot
Match: Q9XIR4 (APO protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO1 PE=2 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 4.6e-84
Identity = 157/379 (41.42%), Postives = 233/379 (61.48%), Query Frame = 0


Query: 44  VDLPRPRERKSDRKPFPTPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQ 103
           VDLP P   K+ +KP+P P K +   A+++++       + L DPP NGLLVP+LV VA 
Sbjct: 74  VDLP-PILPKNKKKPYPIPFKQIQEEARKDKKLAQMGIEKQL-DPPKNGLLVPNLVPVAD 133

Query: 104 NVYLAWNSLRFGISKLLEVIPIQRCRFCFEVHIGHVGHEIRTCNGPKSGLRSATHVWRKG 163
            V   W  L  G+++LL V+P+  C  C  VH+ +VGH IR CNGP +  R  +H W KG
Sbjct: 134 QVIDNWKLLIKGLAQLLHVVPVFACSECGAVHVANVGHNIRDCNGPTNSQRRGSHSWVKG 193

Query: 164 GAQDVVFFPKCYHLYDRVGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPV 223
              DV+   + YH+YD  G+ R+ HE R+   RIPAL+ELCIQAGV++ +YP +RRT+P+
Sbjct: 194 TINDVLIPVESYHMYDPFGR-RIKHETRFEYERIPALVELCIQAGVEIPEYPCRRRTQPI 253

Query: 224 YSIEGRIVDFESVKETNEVKTGVSVKPDHGIEHEGGSRCSFSWKISNTLD----QQHEEN 283
             +  R++D          + G   +P+   + +  S  S      +TL           
Sbjct: 254 RMMGKRVID----------RGGYHKEPE---KPQTSSSLSSPLAELDTLGVFERYPPPTP 313

Query: 284 RELRKLSIMTLNSWVEMVSGAKKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRN 343
            ++ K++  T++++ ++  G  K+M K+ V+ CGYC EV VGP GH V++C   KHQ R+
Sbjct: 314 EDIPKIAQETMDAYEKVRLGVTKLMRKFTVKACGYCSEVHVGPWGHSVKLCGEFKHQWRD 373

Query: 344 GLHAWQEATIDDIVGPNHVWHVRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYR 403
           G H WQ+A +D++  PN+VWHVRDLKG PL   L+RFYGK PA+VE+C+ +GA +P +Y+
Sbjct: 374 GKHGWQDALVDEVFPPNYVWHVRDLKGNPLTGNLRRFYGKAPALVEICMHSGARVPQRYK 433

Query: 404 SMLRLDVVPPHPDEVDLVA 419
           +M+RLD++ P   E D+VA
Sbjct: 434 AMMRLDIIVPDSQEADMVA 436

[Close]

BLAST of Carg24556 vs. ExPASy Swiss-Prot
Match: Q8W4A5 (APO protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO2 PE=2 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.9e-82
Identity = 160/378 (42.33%), Postives = 229/378 (60.58%), Query Frame = 0


Query: 41  PSYVDLPRPRERKSDRKPFPTPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVD 100
           P   DLP+   R+ ++KPFP P+  L R A+E  +    +P R L  PP NG++V  LV 
Sbjct: 78  PQNEDLPKQYTRR-EKKPFPVPIVDLRRAARERVKNNKDKPKRPL-PPPKNGMVVKSLVP 137

Query: 101 VAQNVYLAWNSLRFGISKLLEVIPIQRCRFCFEVHIGHVGHEIRTCNGPKSGLRSATHVW 160
           +A  VY A   L   + +L++V+ +  C +C E+H+G  GH  ++C GP +  R   H W
Sbjct: 138 LAYKVYNARIRLINNLHRLMKVVRVNACGWCNEIHVGPYGHPFKSCKGPNTSQRKGLHEW 197

Query: 161 RKGGAQDVVFFPKCYHLYDRVGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRT 220
                +DV+   + YHL+DR+GK R+ H+ER+ IPR+PA++ELCIQ GV++ ++P+KRR 
Sbjct: 198 TNSVIEDVIVPLEAYHLFDRLGK-RIRHDERFSIPRVPAVVELCIQGGVEIPEFPAKRRR 257

Query: 221 KPVYSIEGRIVDFESVKETNEVKTGVSVKPDHGIEHEGGSRCSFSWKISNTLDQQHEENR 280
           KP+  I G+  +F    ET E+       P   +  E          +S       EE  
Sbjct: 258 KPIIRI-GK-SEFVDADET-ELPDPEPQPPPVPLLTE--------LPVSEITPPSSEE-- 317

Query: 281 ELRKLSIMTLNSWVEMVSGAKKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNG 340
           E   L+  TL +W EM +GAKK+M  YRV+ CGYCPEV VGP GHK + C A KHQ RNG
Sbjct: 318 ETVSLAEETLQAWEEMRAGAKKLMRMYRVRVCGYCPEVHVGPTGHKAQNCGAFKHQQRNG 377

Query: 341 LHAWQEATIDDIVGPNHVWHVRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYRS 400
            H WQ A +DD++ P +VWHV D+ GPP+  +L+ FYG+ PAVVE+C QAGA +P+ YR+
Sbjct: 378 QHGWQSAVLDDLIPPRYVWHVPDVNGPPMQRELRSFYGQAPAVVEICAQAGAVVPEHYRA 437

Query: 401 MLRLDV-VPPHPDEVDLV 418
            +RL+V +P    E ++V
Sbjct: 438 TMRLEVGIPSSVKEAEMV 439

[Close]

BLAST of Carg24556 vs. ExPASy Swiss-Prot
Match: Q9LSZ0 (APO protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO4 PE=2 SV=2)

HSP 1 Score: 163.7 bits (413), Expect = 4.5e-39
Identity = 88/309 (28.48%), Postives = 147/309 (47.57%), Query Frame = 0


Query: 95  VPDLVDVAQNVYLAWNSLRFGISKLLEVIPIQRCRFCFEVHIGHVGHEIRTCNGPKSGLR 154
           V ++V VA+ + +A  +L   I+ LL+V P+  C+FC EV +G  GH I TC        
Sbjct: 55  VKEIVPVAEEILIARKNLISNIAALLKVFPVLTCKFCSEVFVGKEGHLIETCRSYIRRGN 114

Query: 155 SATHVWRKGGAQDVVFFPKCYHLYDRVGKPRVGHEERYVIPRIPALLELCIQAGVDLEKY 214
           +  H W  G   D++   + YHL++ + +  + H+ER+   R+PA+LELC QAG      
Sbjct: 115 NRLHEWVPGSINDILVPVESYHLHN-ISQGVIRHQERFDYDRVPAILELCCQAGA----- 174

Query: 215 PSKRRTKPVYSIEGRIVDFESVKETNEVKTGVSVKPDHGIEHEGGSRCSFSWKISNTLDQ 274
                           +  E + + +E+     +  +                     D 
Sbjct: 175 ----------------IHPEEILQYSEIHDNPQISEE---------------------DI 234

Query: 275 QHEENRELRKLSIMTLNSWVEMVSGAKKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASK 334
           +     +L+ +    L +W ++ +G KK++  Y  + C  C EV VGP GHK R+C   K
Sbjct: 235 RSLPAGDLKYVGANALMAWEKVRAGVKKLLLVYPSKVCKRCKEVHVGPSGHKARLCGVFK 294

Query: 335 HQSRNGLHAWQEATIDDIVGPNHVWHVRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPI 394
           ++S  G H W++A ++D+V    VWH R      L ++ + +YG  PA+V LC   GA +
Sbjct: 295 YESWRGTHYWEKAGVNDLVPEKMVWHRRPQDPVVLVDEGRSYYGHAPAIVSLCSHTGAIV 320

Query: 395 PDQYRSMLR 404
           P +Y   ++
Sbjct: 355 PVKYACKMK 320

[Close]

BLAST of Carg24556 vs. ExPASy TrEMBL
Match: A0A6J1EL54 (APO protein 3, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111435651 PE=4 SV=1)

HSP 1 Score: 876.3 bits (2263), Expect = 5.0e-251
Identity = 417/418 (99.76%), Postives = 417/418 (99.76%), Query Frame = 0


Query: 1   MLRQTSAFVQRGPLIPLNPFHRSFKFTQTAEKFELPDAPDPSYVDLPRPRERKSDRKPFP 60
           MLRQT AFVQRGPLIPLNPFHRSFKFTQTAEKFELPDAPDPSYVDLPRPRERKSDRKPFP
Sbjct: 1   MLRQTRAFVQRGPLIPLNPFHRSFKFTQTAEKFELPDAPDPSYVDLPRPRERKSDRKPFP 60

Query: 61  TPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKLL 120
           TPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKLL
Sbjct: 61  TPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKLL 120

Query: 121 EVIPIQRCRFCFEVHIGHVGHEIRTCNGPKSGLRSATHVWRKGGAQDVVFFPKCYHLYDR 180
           EVIPIQRCRFCFEVHIGHVGHEIRTCNGPKSGLRSATHVWRKGGAQDVVFFPKCYHLYDR
Sbjct: 121 EVIPIQRCRFCFEVHIGHVGHEIRTCNGPKSGLRSATHVWRKGGAQDVVFFPKCYHLYDR 180

Query: 181 VGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFESVKETN 240
           VGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFESVKETN
Sbjct: 181 VGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFESVKETN 240

Query: 241 EVKTGVSVKPDHGIEHEGGSRCSFSWKISNTLDQQHEENRELRKLSIMTLNSWVEMVSGA 300
           EVKTGVSVKPDHGIEHEGGSRCSFSWKISNTLDQQHEENRELRKLSIMTLNSWVEMVSGA
Sbjct: 241 EVKTGVSVKPDHGIEHEGGSRCSFSWKISNTLDQQHEENRELRKLSIMTLNSWVEMVSGA 300

Query: 301 KKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDIVGPNHVWH 360
           KKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDIVGPNHVWH
Sbjct: 301 KKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDIVGPNHVWH 360

Query: 361 VRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYRSMLRLDVVPPHPDEVDLVA 419
           VRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYRSMLRLDVVPPHPDEVDLVA
Sbjct: 361 VRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYRSMLRLDVVPPHPDEVDLVA 418

[Close]

BLAST of Carg24556 vs. ExPASy TrEMBL
Match: A0A6J1IFT0 (APO protein 3, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111472926 PE=4 SV=1)

HSP 1 Score: 862.4 bits (2227), Expect = 7.5e-247
Identity = 412/418 (98.56%), Postives = 412/418 (98.56%), Query Frame = 0


Query: 1   MLRQTSAFVQRGPLIPLNPFHRSFKFTQTAEKFELPDAPDPSYVDLPRPRERKSDRKPFP 60
           MLRQTSAFVQRGPLIPLNPFHRSFKFT TAEKFELPDAPDPSYVDLPRPRERKSDRKPFP
Sbjct: 149 MLRQTSAFVQRGPLIPLNPFHRSFKFTHTAEKFELPDAPDPSYVDLPRPRERKSDRKPFP 208

Query: 61  TPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKLL 120
           TPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKLL
Sbjct: 209 TPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKLL 268

Query: 121 EVIPIQRCRFCFEVHIGHVGHEIRTCNGPKSGLRSATHVWRKGGAQDVVFFPKCYHLYDR 180
           EVIPIQRCRFCFEVHIGHVGHEIRTC GPKSGLRSATHVWRKGGAQDVVFFPKCYHLYDR
Sbjct: 269 EVIPIQRCRFCFEVHIGHVGHEIRTCTGPKSGLRSATHVWRKGGAQDVVFFPKCYHLYDR 328

Query: 181 VGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFESVKETN 240
           VGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFESVKETN
Sbjct: 329 VGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFESVKETN 388

Query: 241 EVKTGVSVKPDHGIEHEGGSRCSFSWKISNTLDQQHEENRELRKLSIMTLNSWVEMVSGA 300
           EVKTGVSVKPD GIEHEGGSRCSFSWKISNTLDQQHEENREL KLSIMTLNSWVEMVSGA
Sbjct: 389 EVKTGVSVKPDLGIEHEGGSRCSFSWKISNTLDQQHEENRELMKLSIMTLNSWVEMVSGA 448

Query: 301 KKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDIVGPNHVWH 360
           KKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDIVGPNHVWH
Sbjct: 449 KKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDIVGPNHVWH 508

Query: 361 VRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYRSMLRLDVVPPHPDEVDLVA 419
            RDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIP QYRSMLRLDVVPPHPDEVDLVA
Sbjct: 509 ARDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPYQYRSMLRLDVVPPHPDEVDLVA 566

[Close]

BLAST of Carg24556 vs. ExPASy TrEMBL
Match: A0A0A0KML8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G044010 PE=4 SV=1)

HSP 1 Score: 668.3 bits (1723), Expect = 2.1e-188
Identity = 330/426 (77.46%), Postives = 362/426 (84.98%), Query Frame = 0


Query: 2   LRQTSAFVQRGP--LIPLNPFHRSFKFTQTAEKFELPDAPDPSYVDLPRPRERKSDRKPF 61
           +R  S   +R P  L  L+ F  S  FT+ AEK E  DAPDP YVDLP+PR  +S RKP+
Sbjct: 7   IRHLSLKTRRIPPNLFGLSSFRCS--FTRNAEKLEYDDAPDPPYVDLPKPRVCESSRKPY 66

Query: 62  PTPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKL 121
           PTPMK+LI+RAKEER AR AQPCRM+E PPDNGLLVPDLV VAQ+VYLAW  L FGIS+L
Sbjct: 67  PTPMKVLIQRAKEERVARKAQPCRMVEYPPDNGLLVPDLVHVAQSVYLAWKMLHFGISRL 126

Query: 122 LEVIPIQRCRFCFEVHIGHVGHEIRTCNGPKSGLRSATHVWRKGGAQDVVFFPKCYHLYD 181
           L+ +PIQRCRFCFEVHIGHVGHEIRTC G KSG RSATH+WRKG  QDVVFFPKCYHLYD
Sbjct: 127 LKAVPIQRCRFCFEVHIGHVGHEIRTCTGEKSGFRSATHIWRKGRVQDVVFFPKCYHLYD 186

Query: 182 RVGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFESVKET 241
           RV KPRVGH+ER+ IPRIPA+LELCIQAGVDLEKYPSKRRTKPVY+IEGRIVDFESVKE 
Sbjct: 187 RVVKPRVGHDERHDIPRIPAILELCIQAGVDLEKYPSKRRTKPVYNIEGRIVDFESVKEM 246

Query: 242 NEVKTGVS-------VKPDHGIEHEGGSRCSFSWKISNTLDQQHEENRELRKLSIMTLNS 301
           NEVKTGVS       VK D GIE EG S+ S   K SNTLDQQ+E + E+R+LSI TL+S
Sbjct: 247 NEVKTGVSTKISDNFVKSDFGIELEGTSKSSLE-KFSNTLDQQYEVDTEVRQLSIQTLDS 306

Query: 302 WVEMVSGAKKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDI 361
           W+EMVSGAKKIMEKY VQTCGYCPEVQVGPKGHKVR+CRASKHQSRNGLHAWQEATIDD+
Sbjct: 307 WLEMVSGAKKIMEKYMVQTCGYCPEVQVGPKGHKVRMCRASKHQSRNGLHAWQEATIDDL 366

Query: 362 VGPNHVWHVRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYRSMLRLDVVPPHPD 419
           VGPN+VWH RDLK PPLDNKLKR+YGKVPAVVELC+QAGAPIPDQYRSM+RLDVV P  D
Sbjct: 367 VGPNYVWHGRDLKAPPLDNKLKRYYGKVPAVVELCVQAGAPIPDQYRSMMRLDVVCPDSD 426

[Close]

BLAST of Carg24556 vs. ExPASy TrEMBL
Match: A0A1S3BNS8 (APO protein 3, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491904 PE=4 SV=1)

HSP 1 Score: 667.9 bits (1722), Expect = 2.7e-188
Identity = 321/411 (78.10%), Postives = 356/411 (86.62%), Query Frame = 0


Query: 15  IPLNPFHRSFKFTQTAEKFELPDAPDPSYVDLPRPRERKSDRKPFPTPMKLLIRRAKEER 74
           IPLN F  S   T+ AEK    DAPDPSYVDLP+PR  +S RKP+PTPMK+LI+RAKEER
Sbjct: 17  IPLNLFGLSPFHTRNAEKLGYDDAPDPSYVDLPKPRVSESSRKPYPTPMKVLIQRAKEER 76

Query: 75  EARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKLLEVIPIQRCRFCFEV 134
            AR AQPC M+E PPDNGLLVPDLV VA +VYLAW +L FGIS+LL+ +PIQRCRFCFEV
Sbjct: 77  LARKAQPCTMVEHPPDNGLLVPDLVHVAHSVYLAWKTLLFGISRLLDAVPIQRCRFCFEV 136

Query: 135 HIGHVGHEIRTCNGPKSGLRSATHVWRKGGAQDVVFFPKCYHLYDRVGKPRVGHEERYVI 194
           HIGHVGHEIRTC G KSG RSATH+WRKG  QDVVFFPKCYHLYDR  KPRVGH+E++ I
Sbjct: 137 HIGHVGHEIRTCTGEKSGFRSATHIWRKGSVQDVVFFPKCYHLYDRAVKPRVGHDEKHDI 196

Query: 195 PRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFESVKETNEVKTGVS------- 254
           PRIPA+LELCIQAGVDLEKYP+KRRTKPVY+IEGRIVDFESVKE NEVKTG+S       
Sbjct: 197 PRIPAILELCIQAGVDLEKYPTKRRTKPVYNIEGRIVDFESVKEMNEVKTGLSTRSSDNF 256

Query: 255 VKPDHGIEHEGGSRCSFSWKISNTLDQQHEENRELRKLSIMTLNSWVEMVSGAKKIMEKY 314
           VK D GIE EG S+ SF  K+SNTLDQQ+E + E+R+LSI TL+SW+EMVSGAKKIMEKY
Sbjct: 257 VKSDFGIELEGTSKSSFLRKLSNTLDQQYEVDTEVRQLSIQTLDSWLEMVSGAKKIMEKY 316

Query: 315 RVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDIVGPNHVWHVRDLKGP 374
            VQTCGYCPEVQVGPKGHKVR+CRASKHQSRNGLHAWQEA IDD+VGPN+VWHVRDL+ P
Sbjct: 317 MVQTCGYCPEVQVGPKGHKVRMCRASKHQSRNGLHAWQEAMIDDLVGPNYVWHVRDLEAP 376

Query: 375 PLDNKLKRFYGKVPAVVELCLQAGAPIPDQYRSMLRLDVVPPHPDEVDLVA 419
           PLDNKLKR+YGKVPAVVELC+QAGAPIPDQYRSM+RLDVV P  DEVDLVA
Sbjct: 377 PLDNKLKRYYGKVPAVVELCVQAGAPIPDQYRSMMRLDVVCPDSDEVDLVA 427

[Close]

BLAST of Carg24556 vs. ExPASy TrEMBL
Match: A0A1S3BNU7 (APO protein 3, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491904 PE=4 SV=1)

HSP 1 Score: 662.5 bits (1708), Expect = 1.1e-186
Identity = 321/414 (77.54%), Postives = 356/414 (85.99%), Query Frame = 0


Query: 15  IPLNPFHRSFKFTQTAEKFELPDAPDPSYVDLPRPRERKSDRKPFPTPMKLLIRRAKEER 74
           IPLN F  S   T+ AEK    DAPDPSYVDLP+PR  +S RKP+PTPMK+LI+RAKEER
Sbjct: 17  IPLNLFGLSPFHTRNAEKLGYDDAPDPSYVDLPKPRVSESSRKPYPTPMKVLIQRAKEER 76

Query: 75  EARNAQPCRMLEDPPDNGLLVPDLVDVAQNVYLAWNSLRFGISKLLEVIPIQRCR---FC 134
            AR AQPC M+E PPDNGLLVPDLV VA +VYLAW +L FGIS+LL+ +PIQRCR   FC
Sbjct: 77  LARKAQPCTMVEHPPDNGLLVPDLVHVAHSVYLAWKTLLFGISRLLDAVPIQRCRCLLFC 136

Query: 135 FEVHIGHVGHEIRTCNGPKSGLRSATHVWRKGGAQDVVFFPKCYHLYDRVGKPRVGHEER 194
           FEVHIGHVGHEIRTC G KSG RSATH+WRKG  QDVVFFPKCYHLYDR  KPRVGH+E+
Sbjct: 137 FEVHIGHVGHEIRTCTGEKSGFRSATHIWRKGSVQDVVFFPKCYHLYDRAVKPRVGHDEK 196

Query: 195 YVIPRIPALLELCIQAGVDLEKYPSKRRTKPVYSIEGRIVDFESVKETNEVKTGVS---- 254
           + IPRIPA+LELCIQAGVDLEKYP+KRRTKPVY+IEGRIVDFESVKE NEVKTG+S    
Sbjct: 197 HDIPRIPAILELCIQAGVDLEKYPTKRRTKPVYNIEGRIVDFESVKEMNEVKTGLSTRSS 256

Query: 255 ---VKPDHGIEHEGGSRCSFSWKISNTLDQQHEENRELRKLSIMTLNSWVEMVSGAKKIM 314
              VK D GIE EG S+ SF  K+SNTLDQQ+E + E+R+LSI TL+SW+EMVSGAKKIM
Sbjct: 257 DNFVKSDFGIELEGTSKSSFLRKLSNTLDQQYEVDTEVRQLSIQTLDSWLEMVSGAKKIM 316

Query: 315 EKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNGLHAWQEATIDDIVGPNHVWHVRDL 374
           EKY VQTCGYCPEVQVGPKGHKVR+CRASKHQSRNGLHAWQEA IDD+VGPN+VWHVRDL
Sbjct: 317 EKYMVQTCGYCPEVQVGPKGHKVRMCRASKHQSRNGLHAWQEAMIDDLVGPNYVWHVRDL 376

Query: 375 KGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYRSMLRLDVVPPHPDEVDLVA 419
           + PPLDNKLKR+YGKVPAVVELC+QAGAPIPDQYRSM+RLDVV P  DEVDLVA
Sbjct: 377 EAPPLDNKLKRYYGKVPAVVELCVQAGAPIPDQYRSMMRLDVVCPDSDEVDLVA 430

[Close]

BLAST of Carg24556 vs. TAIR 10
Match: AT5G61930.1 (Arabidopsis thaliana protein of unknown function (DUF794) )

HSP 1 Score: 507.7 bits (1306), Expect = 9.0e-144
Identity = 240/384 (62.50%), Postives = 289/384 (75.26%), Query Frame = 0


Query: 40  DPSYVDLPRPRERKSDRKPFPTPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLV 99
           DP Y D+P+P + KS+RKP+PTPMK LIRRAKEE++ R  QPCR+LEDPPDNGLLVP+LV
Sbjct: 40  DPLYADVPKPPKDKSERKPYPTPMKELIRRAKEEKQLRKLQPCRVLEDPPDNGLLVPELV 99

Query: 100 DVAQNVYLAWNSLRFGISKLLEVIPIQRCRFCFEVHIGHVGHEIRTCNGPKSGLRSATHV 159
           DVA  V+   N L  G+SK++  +P+ RCR C EVHIG  GHEIRTC GP SG RSATHV
Sbjct: 100 DVAHCVHRCRNMLLSGLSKIIHHVPVHRCRLCAEVHIGKQGHEIRTCTGPGSGSRSATHV 159

Query: 160 WRKGGAQDVVFFPKCYHLYDRVGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRR 219
           W++G   DVV FPKC+HLYDR  KPRV H+ER+ +P+I A+LELCIQAGVDLEK+PSKRR
Sbjct: 160 WKRGRVSDVVLFPKCFHLYDRAVKPRVIHDERFTVPKISAVLELCIQAGVDLEKFPSKRR 219

Query: 220 TKPVYSIEGRIVDFESVKETNE----VKTGVSVKPDHGIEHEGGSRCSFSWKISNTLDQQ 279
           +KPVYSIEGRIVDFE V + N       T   ++ D                     D+ 
Sbjct: 220 SKPVYSIEGRIVDFEDVNDGNSELAVTSTTTLIQED---------------------DRC 279

Query: 280 HEENRELRKLSIMTLNSWVEMVSGAKKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKH 339
            EE + L++LS  T+ SW EMV G +K+ME+YRV TCGYCPE+QVGPKGHKVR+C+A+KH
Sbjct: 280 KEEKKSLKELSFETMESWFEMVLGVRKLMERYRVWTCGYCPEIQVGPKGHKVRMCKATKH 339

Query: 340 QSRNGLHAWQEATIDDIVGPNHVWHVRD-LKGPPLDNKLKRFYGKVPAVVELCLQAGAPI 399
           Q R+G+HAWQEATIDD+VGP +VWHVRD   G  LDN LKRFYGK PAV+E+C+Q GAP+
Sbjct: 340 QMRDGMHAWQEATIDDVVGPTYVWHVRDPTDGSVLDNSLKRFYGKAPAVIEMCVQGGAPV 399

Query: 400 PDQYRSMLRLDVVPPHPDEVDLVA 419
           PDQY SM+RLDVV P  DEVDLVA
Sbjct: 400 PDQYNSMMRLDVVYPQRDEVDLVA 402

[Close]

BLAST of Carg24556 vs. TAIR 10
Match: AT5G61930.2 (Arabidopsis thaliana protein of unknown function (DUF794) )

HSP 1 Score: 507.7 bits (1306), Expect = 9.0e-144
Identity = 240/384 (62.50%), Postives = 289/384 (75.26%), Query Frame = 0


Query: 40  DPSYVDLPRPRERKSDRKPFPTPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLV 99
           DP Y D+P+P + KS+RKP+PTPMK LIRRAKEE++ R  QPCR+LEDPPDNGLLVP+LV
Sbjct: 40  DPLYADVPKPPKDKSERKPYPTPMKELIRRAKEEKQLRKLQPCRVLEDPPDNGLLVPELV 99

Query: 100 DVAQNVYLAWNSLRFGISKLLEVIPIQRCRFCFEVHIGHVGHEIRTCNGPKSGLRSATHV 159
           DVA  V+   N L  G+SK++  +P+ RCR C EVHIG  GHEIRTC GP SG RSATHV
Sbjct: 100 DVAHCVHRCRNMLLSGLSKIIHHVPVHRCRLCAEVHIGKQGHEIRTCTGPGSGSRSATHV 159

Query: 160 WRKGGAQDVVFFPKCYHLYDRVGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRR 219
           W++G   DVV FPKC+HLYDR  KPRV H+ER+ +P+I A+LELCIQAGVDLEK+PSKRR
Sbjct: 160 WKRGRVSDVVLFPKCFHLYDRAVKPRVIHDERFTVPKISAVLELCIQAGVDLEKFPSKRR 219

Query: 220 TKPVYSIEGRIVDFESVKETNE----VKTGVSVKPDHGIEHEGGSRCSFSWKISNTLDQQ 279
           +KPVYSIEGRIVDFE V + N       T   ++ D                     D+ 
Sbjct: 220 SKPVYSIEGRIVDFEDVNDGNSELAVTSTTTLIQED---------------------DRC 279

Query: 280 HEENRELRKLSIMTLNSWVEMVSGAKKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKH 339
            EE + L++LS  T+ SW EMV G +K+ME+YRV TCGYCPE+QVGPKGHKVR+C+A+KH
Sbjct: 280 KEEKKSLKELSFETMESWFEMVLGVRKLMERYRVWTCGYCPEIQVGPKGHKVRMCKATKH 339

Query: 340 QSRNGLHAWQEATIDDIVGPNHVWHVRD-LKGPPLDNKLKRFYGKVPAVVELCLQAGAPI 399
           Q R+G+HAWQEATIDD+VGP +VWHVRD   G  LDN LKRFYGK PAV+E+C+Q GAP+
Sbjct: 340 QMRDGMHAWQEATIDDVVGPTYVWHVRDPTDGSVLDNSLKRFYGKAPAVIEMCVQGGAPV 399

Query: 400 PDQYRSMLRLDVVPPHPDEVDLVA 419
           PDQY SM+RLDVV P  DEVDLVA
Sbjct: 400 PDQYNSMMRLDVVYPQRDEVDLVA 402

[Close]

BLAST of Carg24556 vs. TAIR 10
Match: AT1G64810.1 (Arabidopsis thaliana protein of unknown function (DUF794) )

HSP 1 Score: 313.2 bits (801), Expect = 3.3e-85
Identity = 157/379 (41.42%), Postives = 233/379 (61.48%), Query Frame = 0


Query: 44  VDLPRPRERKSDRKPFPTPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQ 103
           VDLP P   K+ +KP+P P K +   A+++++       + L DPP NGLLVP+LV VA 
Sbjct: 74  VDLP-PILPKNKKKPYPIPFKQIQEEARKDKKLAQMGIEKQL-DPPKNGLLVPNLVPVAD 133

Query: 104 NVYLAWNSLRFGISKLLEVIPIQRCRFCFEVHIGHVGHEIRTCNGPKSGLRSATHVWRKG 163
            V   W  L  G+++LL V+P+  C  C  VH+ +VGH IR CNGP +  R  +H W KG
Sbjct: 134 QVIDNWKLLIKGLAQLLHVVPVFACSECGAVHVANVGHNIRDCNGPTNSQRRGSHSWVKG 193

Query: 164 GAQDVVFFPKCYHLYDRVGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPV 223
              DV+   + YH+YD  G+ R+ HE R+   RIPAL+ELCIQAGV++ +YP +RRT+P+
Sbjct: 194 TINDVLIPVESYHMYDPFGR-RIKHETRFEYERIPALVELCIQAGVEIPEYPCRRRTQPI 253

Query: 224 YSIEGRIVDFESVKETNEVKTGVSVKPDHGIEHEGGSRCSFSWKISNTLD----QQHEEN 283
             +  R++D          + G   +P+   + +  S  S      +TL           
Sbjct: 254 RMMGKRVID----------RGGYHKEPE---KPQTSSSLSSPLAELDTLGVFERYPPPTP 313

Query: 284 RELRKLSIMTLNSWVEMVSGAKKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRN 343
            ++ K++  T++++ ++  G  K+M K+ V+ CGYC EV VGP GH V++C   KHQ R+
Sbjct: 314 EDIPKIAQETMDAYEKVRLGVTKLMRKFTVKACGYCSEVHVGPWGHSVKLCGEFKHQWRD 373

Query: 344 GLHAWQEATIDDIVGPNHVWHVRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYR 403
           G H WQ+A +D++  PN+VWHVRDLKG PL   L+RFYGK PA+VE+C+ +GA +P +Y+
Sbjct: 374 GKHGWQDALVDEVFPPNYVWHVRDLKGNPLTGNLRRFYGKAPALVEICMHSGARVPQRYK 433

Query: 404 SMLRLDVVPPHPDEVDLVA 419
           +M+RLD++ P   E D+VA
Sbjct: 434 AMMRLDIIVPDSQEADMVA 436

[Close]

BLAST of Carg24556 vs. TAIR 10
Match: AT1G64810.2 (Arabidopsis thaliana protein of unknown function (DUF794) )

HSP 1 Score: 313.2 bits (801), Expect = 3.3e-85
Identity = 157/379 (41.42%), Postives = 233/379 (61.48%), Query Frame = 0


Query: 44  VDLPRPRERKSDRKPFPTPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVDVAQ 103
           VDLP P   K+ +KP+P P K +   A+++++       + L DPP NGLLVP+LV VA 
Sbjct: 98  VDLP-PILPKNKKKPYPIPFKQIQEEARKDKKLAQMGIEKQL-DPPKNGLLVPNLVPVAD 157

Query: 104 NVYLAWNSLRFGISKLLEVIPIQRCRFCFEVHIGHVGHEIRTCNGPKSGLRSATHVWRKG 163
            V   W  L  G+++LL V+P+  C  C  VH+ +VGH IR CNGP +  R  +H W KG
Sbjct: 158 QVIDNWKLLIKGLAQLLHVVPVFACSECGAVHVANVGHNIRDCNGPTNSQRRGSHSWVKG 217

Query: 164 GAQDVVFFPKCYHLYDRVGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRTKPV 223
              DV+   + YH+YD  G+ R+ HE R+   RIPAL+ELCIQAGV++ +YP +RRT+P+
Sbjct: 218 TINDVLIPVESYHMYDPFGR-RIKHETRFEYERIPALVELCIQAGVEIPEYPCRRRTQPI 277

Query: 224 YSIEGRIVDFESVKETNEVKTGVSVKPDHGIEHEGGSRCSFSWKISNTLD----QQHEEN 283
             +  R++D          + G   +P+   + +  S  S      +TL           
Sbjct: 278 RMMGKRVID----------RGGYHKEPE---KPQTSSSLSSPLAELDTLGVFERYPPPTP 337

Query: 284 RELRKLSIMTLNSWVEMVSGAKKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRN 343
            ++ K++  T++++ ++  G  K+M K+ V+ CGYC EV VGP GH V++C   KHQ R+
Sbjct: 338 EDIPKIAQETMDAYEKVRLGVTKLMRKFTVKACGYCSEVHVGPWGHSVKLCGEFKHQWRD 397

Query: 344 GLHAWQEATIDDIVGPNHVWHVRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYR 403
           G H WQ+A +D++  PN+VWHVRDLKG PL   L+RFYGK PA+VE+C+ +GA +P +Y+
Sbjct: 398 GKHGWQDALVDEVFPPNYVWHVRDLKGNPLTGNLRRFYGKAPALVEICMHSGARVPQRYK 457

Query: 404 SMLRLDVVPPHPDEVDLVA 419
           +M+RLD++ P   E D+VA
Sbjct: 458 AMMRLDIIVPDSQEADMVA 460

[Close]

BLAST of Carg24556 vs. TAIR 10
Match: AT5G57930.1 (Arabidopsis thaliana protein of unknown function (DUF794) )

HSP 1 Score: 307.8 bits (787), Expect = 1.4e-83
Identity = 160/378 (42.33%), Postives = 229/378 (60.58%), Query Frame = 0


Query: 41  PSYVDLPRPRERKSDRKPFPTPMKLLIRRAKEEREARNAQPCRMLEDPPDNGLLVPDLVD 100
           P   DLP+   R+ ++KPFP P+  L R A+E  +    +P R L  PP NG++V  LV 
Sbjct: 78  PQNEDLPKQYTRR-EKKPFPVPIVDLRRAARERVKNNKDKPKRPL-PPPKNGMVVKSLVP 137

Query: 101 VAQNVYLAWNSLRFGISKLLEVIPIQRCRFCFEVHIGHVGHEIRTCNGPKSGLRSATHVW 160
           +A  VY A   L   + +L++V+ +  C +C E+H+G  GH  ++C GP +  R   H W
Sbjct: 138 LAYKVYNARIRLINNLHRLMKVVRVNACGWCNEIHVGPYGHPFKSCKGPNTSQRKGLHEW 197

Query: 161 RKGGAQDVVFFPKCYHLYDRVGKPRVGHEERYVIPRIPALLELCIQAGVDLEKYPSKRRT 220
                +DV+   + YHL+DR+GK R+ H+ER+ IPR+PA++ELCIQ GV++ ++P+KRR 
Sbjct: 198 TNSVIEDVIVPLEAYHLFDRLGK-RIRHDERFSIPRVPAVVELCIQGGVEIPEFPAKRRR 257

Query: 221 KPVYSIEGRIVDFESVKETNEVKTGVSVKPDHGIEHEGGSRCSFSWKISNTLDQQHEENR 280
           KP+  I G+  +F    ET E+       P   +  E          +S       EE  
Sbjct: 258 KPIIRI-GK-SEFVDADET-ELPDPEPQPPPVPLLTE--------LPVSEITPPSSEE-- 317

Query: 281 ELRKLSIMTLNSWVEMVSGAKKIMEKYRVQTCGYCPEVQVGPKGHKVRICRASKHQSRNG 340
           E   L+  TL +W EM +GAKK+M  YRV+ CGYCPEV VGP GHK + C A KHQ RNG
Sbjct: 318 ETVSLAEETLQAWEEMRAGAKKLMRMYRVRVCGYCPEVHVGPTGHKAQNCGAFKHQQRNG 377

Query: 341 LHAWQEATIDDIVGPNHVWHVRDLKGPPLDNKLKRFYGKVPAVVELCLQAGAPIPDQYRS 400
            H WQ A +DD++ P +VWHV D+ GPP+  +L+ FYG+ PAVVE+C QAGA +P+ YR+
Sbjct: 378 QHGWQSAVLDDLIPPRYVWHVPDVNGPPMQRELRSFYGQAPAVVEICAQAGAVVPEHYRA 437

Query: 401 MLRLDV-VPPHPDEVDLV 418
            +RL+V +P    E ++V
Sbjct: 438 TMRLEVGIPSSVKEAEMV 439

The following BLAST results are available for this feature:

BLAST of Carg24556 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6587392.1	2.7e-251	100.00	APO protein 3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022928867.1	1.0e-250	99.76	APO protein 3, mitochondrial-like [Cucurbita moschata]	[more]
XP_023531657.1	1.3e-248	99.04	APO protein 3, mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023531656.1	5.3e-247	98.34	APO protein 3, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022974293.1	1.5e-246	98.56	APO protein 3, mitochondrial [Cucurbita maxima]	[more]

BLAST of Carg24556 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FH50	1.3e-142	62.50	APO protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO3 PE=2 SV=1	[more]
Q9XIR4	4.6e-84	41.42	APO protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO1 PE=2 SV=1	[more]
Q8W4A5	1.9e-82	42.33	APO protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APO2 PE=2 SV=1	[more]
Q9LSZ0	4.5e-39	28.48	APO protein 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=APO4 PE=2 SV=2	[more]

BLAST of Carg24556 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EL54	5.0e-251	99.76	APO protein 3, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111435651 ...	[more]
A0A6J1IFT0	7.5e-247	98.56	APO protein 3, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111472926 PE=4 SV...	[more]
A0A0A0KML8	2.1e-188	77.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G044010 PE=4 SV=1	[more]
A0A1S3BNS8	2.7e-188	78.10	APO protein 3, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491904 ...	[more]
A0A1S3BNU7	1.1e-186	77.54	APO protein 3, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491904 ...	[more]

BLAST of Carg24556 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61930.1	9.0e-144	62.50	Arabidopsis thaliana protein of unknown function (DUF794)	[more]
AT5G61930.2	9.0e-144	62.50	Arabidopsis thaliana protein of unknown function (DUF794)	[more]
AT1G64810.1	3.3e-85	41.42	Arabidopsis thaliana protein of unknown function (DUF794)	[more]
AT1G64810.2	3.3e-85	41.42	Arabidopsis thaliana protein of unknown function (DUF794)	[more]
AT5G57930.1	1.4e-83	42.33	Arabidopsis thaliana protein of unknown function (DUF794)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023342	APO domain	PFAM	PF05634	APO_RNA-bind	coord: 287..396 e-value: 1.8E-26 score: 92.8 coord: 40..232 e-value: 6.3E-76 score: 254.2
IPR023342	APO domain	PROSITE	PS51499	APO	coord: 127..213 score: 22.557436
IPR023342	APO domain	PROSITE	PS51499	APO	coord: 311..396 score: 30.061556
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..59
None	No IPR available	PANTHER	PTHR10388	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	coord: 26..418
None	No IPR available	PANTHER	PTHR10388:SF48	APO PROTEIN 3, MITOCHONDRIAL	coord: 26..418

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24556-RA	Carg24556-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003723	RNA binding