Carg24525 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24525
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	PLATZ transcription factor family protein
Location	Carg_Chr19: 1733876 .. 1735198 (-)
RNA-Seq Expression	Carg24525
Synteny	Carg24525

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAACGCATCTTTCCCCTTTTGCTTCGGCTTAGACTTTTTTCGTAGATAAGAACCACTTCCCTCTCTCCCTTCCATTCTCTAAAATCACGAACACTGTTCTTCGTCATTCAATCGACCCCAAGAACAGAAGAATCATGGTATGATTTTGGGTTTATGTTCTTTTCTCAATCTGGGTTTCTTTGTATTTCAATGGCGGATTCTGTTAAAACAGGGCGCTGGAGTTCTTGAGGAGGAAGATAACCGATGGCCGCCATGGCTGAAACCTTTGCTCCGTGAAAGTTTCTTCGTTCAATGCAAGTTTCATGCCGATTCCCATAAGAGTGAATGTAATATGTATTGTTTGGATTGTATGAATGGCGCTCTCTGTTCTCTCTGCCTTGCTTATCACAAAGATCATCGCGCCATTCAGGTTCGTTTAGAAACTCTAAATTTCCCTTTCTGGGTAAGAACTCGTGCGATTTCCCCTCAAGAACACTCGTAACAAACCCATTACTCCACCAATTTAGATTACGAAAACTGGGTTTTCTGGGTTTGCTCTGTTTCCTCTGTTTGCTCTGTTTTATGATTCTGGCTCTGTTTTATCACAAAGATCATCACGCCATTCAGATTCGTTTAGAAACTCTAAATTTACCTTTATGGGAAATAACTTGTGGGATTTCCCGTTCAAGAACATTCATAACCCCATTACAATTTAGATTACGAACTGGGTTTTCTGGGTTTTCTCTGTTTTATGATTCTGGCTCTGTTTTCATGATTCTGCCTCTGATTTTATGATTTTGGCTCTGTTTTGGCGCAGATTAGGAGGTCATCGTACCACGATGTCATAAGGGTATCAGAGATTCAGAAAGTTCTCGACATTACCGGCGTTCAAACCTACATTATCAACAGCGCGCGGGTCGTATTCTTGAACGAACGGCCACAGCCAAGGCCAGGCAAAGGCGTGACGAACACCTGTGAGGTCTGCGAGCGCAGCCTCCTCGATTCTTTCCGATTCTGCTCTCTGGGTTGCAAGGTAAACTTAGTTCATATCAATGCCTTATTGTTGAGATAGCGTTGATTTCGAGAAATTGATATCTGGGTTTCTTCCAGATTGTGGGAATATCGAAGAAATTCGTGAAGAAACGGCCGGCAATGGGATCAGATTCAGAGGATTCTTCGTCGTACAGCAGCAGCAGAAACAAGAACAGAGTGGTGCTGCAGAGCTTCACGCCATCAACGCCACCACCAACTTTGGTTAGTTACAGAACGGCCAAACGAAGAAAAGGGATTCCACACAGAGCGCCAATGGGTGGACTCATAATCGAATATTAAAAAAAAA

mRNA sequence

ATGGCCAACGCATCTTTCCCCTTTTGCTTCGGCTTAGACTTTTTTCGTAGATAAGAACCACTTCCCTCTCTCCCTTCCATTCTCTAAAATCACGAACACTGTTCTTCGTCATTCAATCGACCCCAAGAACAGAAGAATCATGGGCGCTGGAGTTCTTGAGGAGGAAGATAACCGATGGCCGCCATGGCTGAAACCTTTGCTCCGTGAAAGTTTCTTCGTTCAATGCAAGTTTCATGCCGATTCCCATAAGAGTGAATGTAATATGTATTGTTTGGATTGTATGAATGGCGCTCTCTGTTCTCTCTGCCTTGCTTATCACAAAGATCATCGCGCCATTCAGATTAGGAGGTCATCGTACCACGATGTCATAAGGGTATCAGAGATTCAGAAAGTTCTCGACATTACCGGCGTTCAAACCTACATTATCAACAGCGCGCGGGTCGTATTCTTGAACGAACGGCCACAGCCAAGGCCAGGCAAAGGCGTGACGAACACCTGTGAGGTCTGCGAGCGCAGCCTCCTCGATTCTTTCCGATTCTGCTCTCTGGGTTGCAAGATTGTGGGAATATCGAAGAAATTCGTGAAGAAACGGCCGGCAATGGGATCAGATTCAGAGGATTCTTCGTCGTACAGCAGCAGCAGAAACAAGAACAGAGTGGTGCTGCAGAGCTTCACGCCATCAACGCCACCACCAACTTTGGTTAGTTACAGAACGGCCAAACGAAGAAAAGGGATTCCACACAGAGCGCCAATGGGTGGACTCATAATCGAATATTAAAAAAAAA

Coding sequence (CDS)

ATGGGCGCTGGAGTTCTTGAGGAGGAAGATAACCGATGGCCGCCATGGCTGAAACCTTTGCTCCGTGAAAGTTTCTTCGTTCAATGCAAGTTTCATGCCGATTCCCATAAGAGTGAATGTAATATGTATTGTTTGGATTGTATGAATGGCGCTCTCTGTTCTCTCTGCCTTGCTTATCACAAAGATCATCGCGCCATTCAGATTAGGAGGTCATCGTACCACGATGTCATAAGGGTATCAGAGATTCAGAAAGTTCTCGACATTACCGGCGTTCAAACCTACATTATCAACAGCGCGCGGGTCGTATTCTTGAACGAACGGCCACAGCCAAGGCCAGGCAAAGGCGTGACGAACACCTGTGAGGTCTGCGAGCGCAGCCTCCTCGATTCTTTCCGATTCTGCTCTCTGGGTTGCAAGATTGTGGGAATATCGAAGAAATTCGTGAAGAAACGGCCGGCAATGGGATCAGATTCAGAGGATTCTTCGTCGTACAGCAGCAGCAGAAACAAGAACAGAGTGGTGCTGCAGAGCTTCACGCCATCAACGCCACCACCAACTTTGGTTAGTTACAGAACGGCCAAACGAAGAAAAGGGATTCCACACAGAGCGCCAATGGGTGGACTCATAATCGAATATTAA

Protein sequence

MGAGVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGISKKFVKKRPAMGSDSEDSSSYSSSRNKNRVVLQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY

Homology

[Close]

BLAST of Carg24525 vs. NCBI nr
Match: XP_022963765.1 (uncharacterized protein LOC111463960 [Cucurbita moschata] >XP_022967442.1 uncharacterized protein LOC111466981 [Cucurbita maxima] >XP_023553670.1 uncharacterized protein LOC111811153 [Cucurbita pepo subsp. pepo] >KAG6571658.1 hypothetical protein SDJN03_28386, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011387.1 hypothetical protein SDJN02_26292 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 441.0 bits (1133), Expect = 5.6e-120
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MGAGVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60
           MGAGVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH
Sbjct: 1   MGAGVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKIVGISKKFVKKRPAMGSDSEDSSSYSSSRNKNRVVLQSFTP 180
           EVCERSLLDSFRFCSLGCKIVGISKKFVKKRPAMGSDSEDSSSYSSSRNKNRVVLQSFTP
Sbjct: 121 EVCERSLLDSFRFCSLGCKIVGISKKFVKKRPAMGSDSEDSSSYSSSRNKNRVVLQSFTP 180

Query: 181 STPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 213
           STPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY
Sbjct: 181 STPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 212

[Close]

BLAST of Carg24525 vs. NCBI nr
Match: XP_038888735.1 (uncharacterized protein LOC120078532 [Benincasa hispida])

HSP 1 Score: 399.4 bits (1025), Expect = 1.9e-107
Identity = 198/221 (89.59%), Postives = 200/221 (90.50%), Query Frame = 0


Query: 1   MGAGVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60
           MG G  E+EDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLA+H
Sbjct: 1   MGVGCPEDEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKIVGISKKFVKKRPAMGSDSEDSSSYSSS---------RNKN 180
           EVCERSLLDSFRFCSLGCKIVG SK F KKR  MGSDSEDSS  SSS          NKN
Sbjct: 121 EVCERSLLDSFRFCSLGCKIVGTSKNFEKKRRVMGSDSEDSSYSSSSSSQGRIMKNNNKN 180

Query: 181 RVVLQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 213
           RVV QSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY
Sbjct: 181 RVV-QSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 220

[Close]

BLAST of Carg24525 vs. NCBI nr
Match: XP_022159845.1 (uncharacterized protein LOC111026143, partial [Momordica charantia])

HSP 1 Score: 391.7 bits (1005), Expect = 3.9e-105
Identity = 193/213 (90.61%), Postives = 198/213 (92.96%), Query Frame = 0


Query: 7   EEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAI 66
           +EED+RWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAI
Sbjct: 60  DEEDHRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAI 119

Query: 67  QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 126
           QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS
Sbjct: 120 QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 179

Query: 127 LLDSFRFCSLGCKIVGISKKFVKKRPAMGSDSEDSSSYSSSR-------NKNRVVLQSFT 186
           LLDSFRFCSLGCKIVG SK FVKKR   GSDSEDSS  SSS+       NKN+VV QSFT
Sbjct: 180 LLDSFRFCSLGCKIVGTSKNFVKKRRMTGSDSEDSSYSSSSQGKSMNKNNKNKVV-QSFT 239

Query: 187 PSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 213
           PSTPPPTLV+YRTAKRRKGIPHRAPMGGLIIEY
Sbjct: 240 PSTPPPTLVNYRTAKRRKGIPHRAPMGGLIIEY 271

[Close]

BLAST of Carg24525 vs. NCBI nr
Match: XP_004136189.1 (uncharacterized protein LOC101209912 [Cucumis sativus] >XP_008465982.1 PREDICTED: uncharacterized protein LOC103503550 [Cucumis melo] >KAE8651437.1 hypothetical protein Csa_000726 [Cucumis sativus] >TYK31172.1 putative zinc-binding protein [Cucumis melo var. makuwa])

HSP 1 Score: 391.0 bits (1003), Expect = 6.7e-105
Identity = 194/218 (88.99%), Postives = 198/218 (90.83%), Query Frame = 0


Query: 3   AGVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKD 62
           AG   +EDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLA+HKD
Sbjct: 4   AGSPVDEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFHKD 63

Query: 63  HRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEV 122
           HRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEV
Sbjct: 64  HRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEV 123

Query: 123 CERSLLDSFRFCSLGCKIVGISKKFVKKRPAMGSDSEDSSSYSSS--------RNKNRVV 182
           CERSLLDSFRFCSLGCKIVG SK + KKR  MGSDSEDSS  S+S         NKNRVV
Sbjct: 124 CERSLLDSFRFCSLGCKIVGTSKNYEKKRRVMGSDSEDSSYSSNSSQGRIMKNSNKNRVV 183

Query: 183 LQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 213
            QSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY
Sbjct: 184 -QSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 220

[Close]

BLAST of Carg24525 vs. NCBI nr
Match: XP_022930997.1 (uncharacterized protein LOC111437323 [Cucurbita moschata] >KAG6606254.1 hypothetical protein SDJN03_03571, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036196.1 hypothetical protein SDJN02_02997 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 387.9 bits (995), Expect = 5.7e-104
Identity = 194/219 (88.58%), Postives = 198/219 (90.41%), Query Frame = 0


Query: 1   MGAGVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60
           MGAG  E+EDNRWPPWLKPLLRE FFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH
Sbjct: 1   MGAGGPEDEDNRWPPWLKPLLRERFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKIVGISKKFVKKRPAM-GSDSEDSSSYSSS------RNKNRV 180
           EVCERSLLDSFRFCSLGCKIVG SK F KK   M GSDSEDS   SSS      +NKN+V
Sbjct: 121 EVCERSLLDSFRFCSLGCKIVGTSKNFEKKPRVMGGSDSEDSCYSSSSQGRAMNKNKNKV 180

Query: 181 VLQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 213
           V QSFTPSTPPPTLVSYRTAKRRKGIPHRAPM GL+IEY
Sbjct: 181 V-QSFTPSTPPPTLVSYRTAKRRKGIPHRAPMSGLMIEY 218

[Close]

BLAST of Carg24525 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.7e-32
Identity = 63/134 (47.01%), Postives = 89/134 (66.42%), Query Frame = 0


Query: 14  PPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAIQIRRSSY 73
           P WL  L  E FFV C +H  + K+E N+ CLDC   +LC  C+  H+ HR +Q+RR  Y
Sbjct: 6   PAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCT-SLCPHCVPSHRFHRLLQVRRYVY 65

Query: 74  HDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRF 133
           HDV+R+ ++QK++D + VQ Y INSA+VVF+ +RPQ R  KG  N C  C+RSL + +  
Sbjct: 66  HDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGAGNYCTSCDRSLQEPYIH 125

Query: 134 CSLGCKIVGISKKF 148
           CSLGCK+  + K++
Sbjct: 126 CSLGCKVDFVMKRY 138

[Close]

BLAST of Carg24525 vs. ExPASy Swiss-Prot
Match: P0CB19 (Uncharacterized protein At3g50808 OS=Arabidopsis thaliana OX=3702 GN=At3g50808 PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 5.3e-04
Identity = 35/128 (27.34%), Postives = 56/128 (43.75%), Query Frame = 0


Query: 82  IQKVLDITGVQTYIINSARVVFLNER---PQPRPGKGVTNTCEVCERSL--LDSFRFCSL 141
           + + +DI+G+  Y IN   +V++N+R      R    V + C++CE  +    S  FCS+
Sbjct: 1   MSQYMDISGIHLYSINGFPIVYINQRRGNNNHRSRSNVMHKCKICEWEIDAASSALFCSM 60

Query: 142 GCKIVGISKKFVKKRPAMGSDSEDSSSYSSSRNKNRVVLQSFTPSTPPPTLVSYRTAKRR 201
            CK           R  +GS  ++    SS        +   +     P +   +   RR
Sbjct: 61  ECKF----------RSVLGSQLDELMENSSE-------VTEISEEIDEPVM---KKRHRR 108

Query: 202 KGIPHRAP 205
           KG PHRAP
Sbjct: 121 KGSPHRAP 108

[Close]

BLAST of Carg24525 vs. ExPASy TrEMBL
Match: A0A6J1HQU7 (uncharacterized protein LOC111466981 OS=Cucurbita maxima OX=3661 GN=LOC111466981 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 2.7e-120
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MGAGVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60
           MGAGVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH
Sbjct: 1   MGAGVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKIVGISKKFVKKRPAMGSDSEDSSSYSSSRNKNRVVLQSFTP 180
           EVCERSLLDSFRFCSLGCKIVGISKKFVKKRPAMGSDSEDSSSYSSSRNKNRVVLQSFTP
Sbjct: 121 EVCERSLLDSFRFCSLGCKIVGISKKFVKKRPAMGSDSEDSSSYSSSRNKNRVVLQSFTP 180

Query: 181 STPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 213
           STPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY
Sbjct: 181 STPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 212

[Close]

BLAST of Carg24525 vs. ExPASy TrEMBL
Match: A0A6J1HIX8 (uncharacterized protein LOC111463960 OS=Cucurbita moschata OX=3662 GN=LOC111463960 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 2.7e-120
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MGAGVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60
           MGAGVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH
Sbjct: 1   MGAGVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC
Sbjct: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120

Query: 121 EVCERSLLDSFRFCSLGCKIVGISKKFVKKRPAMGSDSEDSSSYSSSRNKNRVVLQSFTP 180
           EVCERSLLDSFRFCSLGCKIVGISKKFVKKRPAMGSDSEDSSSYSSSRNKNRVVLQSFTP
Sbjct: 121 EVCERSLLDSFRFCSLGCKIVGISKKFVKKRPAMGSDSEDSSSYSSSRNKNRVVLQSFTP 180

Query: 181 STPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 213
           STPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY
Sbjct: 181 STPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 212

[Close]

BLAST of Carg24525 vs. ExPASy TrEMBL
Match: A0A6J1DZX6 (uncharacterized protein LOC111026143 OS=Momordica charantia OX=3673 GN=LOC111026143 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 1.9e-105
Identity = 193/213 (90.61%), Postives = 198/213 (92.96%), Query Frame = 0


Query: 7   EEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAI 66
           +EED+RWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAI
Sbjct: 60  DEEDHRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAI 119

Query: 67  QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 126
           QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS
Sbjct: 120 QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 179

Query: 127 LLDSFRFCSLGCKIVGISKKFVKKRPAMGSDSEDSSSYSSSR-------NKNRVVLQSFT 186
           LLDSFRFCSLGCKIVG SK FVKKR   GSDSEDSS  SSS+       NKN+VV QSFT
Sbjct: 180 LLDSFRFCSLGCKIVGTSKNFVKKRRMTGSDSEDSSYSSSSQGKSMNKNNKNKVV-QSFT 239

Query: 187 PSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 213
           PSTPPPTLV+YRTAKRRKGIPHRAPMGGLIIEY
Sbjct: 240 PSTPPPTLVNYRTAKRRKGIPHRAPMGGLIIEY 271

[Close]

BLAST of Carg24525 vs. ExPASy TrEMBL
Match: A0A5D3E5J1 (Putative zinc-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004540 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 3.2e-105
Identity = 194/218 (88.99%), Postives = 198/218 (90.83%), Query Frame = 0


Query: 3   AGVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKD 62
           AG   +EDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLA+HKD
Sbjct: 4   AGSPVDEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFHKD 63

Query: 63  HRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEV 122
           HRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEV
Sbjct: 64  HRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEV 123

Query: 123 CERSLLDSFRFCSLGCKIVGISKKFVKKRPAMGSDSEDSSSYSSS--------RNKNRVV 182
           CERSLLDSFRFCSLGCKIVG SK + KKR  MGSDSEDSS  S+S         NKNRVV
Sbjct: 124 CERSLLDSFRFCSLGCKIVGTSKNYEKKRRVMGSDSEDSSYSSNSSQGRIMKNSNKNRVV 183

Query: 183 LQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 213
            QSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY
Sbjct: 184 -QSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 220

[Close]

BLAST of Carg24525 vs. ExPASy TrEMBL
Match: A0A1S3CQ58 (uncharacterized protein LOC103503550 OS=Cucumis melo OX=3656 GN=LOC103503550 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 3.2e-105
Identity = 194/218 (88.99%), Postives = 198/218 (90.83%), Query Frame = 0


Query: 3   AGVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKD 62
           AG   +EDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLA+HKD
Sbjct: 4   AGSPVDEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAFHKD 63

Query: 63  HRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEV 122
           HRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEV
Sbjct: 64  HRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEV 123

Query: 123 CERSLLDSFRFCSLGCKIVGISKKFVKKRPAMGSDSEDSSSYSSS--------RNKNRVV 182
           CERSLLDSFRFCSLGCKIVG SK + KKR  MGSDSEDSS  S+S         NKNRVV
Sbjct: 124 CERSLLDSFRFCSLGCKIVGTSKNYEKKRRVMGSDSEDSSYSSNSSQGRIMKNSNKNRVV 183

Query: 183 LQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 213
            QSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY
Sbjct: 184 -QSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 220

[Close]

BLAST of Carg24525 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein )

HSP 1 Score: 319.3 bits (817), Expect = 2.3e-87
Identity = 158/212 (74.53%), Postives = 174/212 (82.08%), Query Frame = 0


Query: 4   GVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKDH 63
           G  EE +  +P WLKPLLRE FFVQCK HADSHKSECNMYCLDC NG LCSLCL++HKDH
Sbjct: 2   GAEEETNKTYPHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDH 61

Query: 64  RAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVC 123
            AIQIRRSSYHDVIRVSEIQK LDITGVQTY+INSA+VVFLNERPQPRPGKGV NTCEVC
Sbjct: 62  HAIQIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVINTCEVC 121

Query: 124 ERSLLDSFRFCSLGCKIVGISKKFVKKRPAMGSDSEDSSSYSS---SRNKNRVVLQSFTP 183
            RSL+DSFRFCSLGCKI GISKK  K+     SDS+DS S +S    +  + ++  SFTP
Sbjct: 122 YRSLVDSFRFCSLGCKISGISKKKRKEWTNNLSDSDDSYSSTSIGRLKKNDDIMNNSFTP 181

Query: 184 STPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 213
           STPP + V+ R AKRRKGIPHRAP GGLIIEY
Sbjct: 182 STPPLSAVNRRIAKRRKGIPHRAPFGGLIIEY 213

[Close]

BLAST of Carg24525 vs. TAIR 10
Match: AT4G17900.1 (PLATZ transcription factor family protein )

HSP 1 Score: 316.6 bits (810), Expect = 1.5e-86
Identity = 157/208 (75.48%), Postives = 173/208 (83.17%), Query Frame = 0


Query: 1   MGAGVLEEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYH 60
           MGAG  EEE+NRWPPWLKPLL+E FFV CKFH DSHKSECNMYCLDC NG LCSLCLA+H
Sbjct: 21  MGAGGPEEEENRWPPWLKPLLKEQFFVHCKFHGDSHKSECNMYCLDCTNGPLCSLCLAHH 80

Query: 61  KDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTC 120
           KDHR IQIRRSSYHDVIRV+EIQK LDI G+QTY+INSA+VVFLNERPQPRPGKGVTNTC
Sbjct: 81  KDHRTIQIRRSSYHDVIRVNEIQKYLDIGGIQTYVINSAKVVFLNERPQPRPGKGVTNTC 140

Query: 121 EVCERSLL-DSFRFCSLGCKIVGISKKFVKKRPAMGSDSEDSSSYSSSRNKNRVVLQSFT 180
           +VC RSL+ DSFRFCSLGCKI G S+ F K R  +  ++EDSSS S +  KN   LQSF+
Sbjct: 141 KVCYRSLVDDSFRFCSLGCKIAGTSRGFEKGRENLLMETEDSSS-SIAIGKNITNLQSFS 200

Query: 181 PSTPPPTLVS-YRTAKRRKGIPHRAPMG 207
           PSTPP T  S  R  KRRKGIPHR+PMG
Sbjct: 201 PSTPPLTTSSNCRIVKRRKGIPHRSPMG 227

[Close]

BLAST of Carg24525 vs. TAIR 10
Match: AT1G32700.2 (PLATZ transcription factor family protein )

HSP 1 Score: 256.5 bits (654), Expect = 1.8e-68
Identity = 130/174 (74.71%), Postives = 144/174 (82.76%), Query Frame = 0


Query: 42  MYCLDCMNGALCSLCLAYHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARV 101
           MYCLDC NG LCSLCL++HKDH AIQIRRSSYHDVIRVSEIQK LDITGVQTY+INSA+V
Sbjct: 1   MYCLDCTNGPLCSLCLSFHKDHHAIQIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKV 60

Query: 102 VFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGISKKFVKKRPAMGSDSEDS 161
           VFLNERPQPRPGKGV NTCEVC RSL+DSFRFCSLGCKI GISKK  K+     SDS+DS
Sbjct: 61  VFLNERPQPRPGKGVINTCEVCYRSLVDSFRFCSLGCKISGISKKKRKEWTNNLSDSDDS 120

Query: 162 SSYSS---SRNKNRVVLQSFTPSTPPPTLVSYRTAKRRKGIPHRAPMGGLIIEY 213
            S +S    +  + ++  SFTPSTPP + V+ R AKRRKGIPHRAP GGLIIEY
Sbjct: 121 YSSTSIGRLKKNDDIMNNSFTPSTPPLSAVNRRIAKRRKGIPHRAPFGGLIIEY 174

[Close]

BLAST of Carg24525 vs. TAIR 10
Match: AT4G17900.2 (PLATZ transcription factor family protein )

HSP 1 Score: 236.5 bits (602), Expect = 2.0e-62
Identity = 123/167 (73.65%), Postives = 137/167 (82.04%), Query Frame = 0


Query: 42  MYCLDCMNGALCSLCLAYHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARV 101
           MYCLDC NG LCSLCLA+HKDHR IQIRRSSYHDVIRV+EIQK LDI G+QTY+INSA+V
Sbjct: 1   MYCLDCTNGPLCSLCLAHHKDHRTIQIRRSSYHDVIRVNEIQKYLDIGGIQTYVINSAKV 60

Query: 102 VFLNERPQPRPGKGVTNTCEVCERSLL-DSFRFCSLGCKIVGISKKFVKKRPAMGSDSED 161
           VFLNERPQPRPGKGVTNTC+VC RSL+ DSFRFCSLGCKI G S+ F K R  +  ++ED
Sbjct: 61  VFLNERPQPRPGKGVTNTCKVCYRSLVDDSFRFCSLGCKIAGTSRGFEKGRENLLMETED 120

Query: 162 SSSYSSSRNKNRVVLQSFTPSTPPPTLVS-YRTAKRRKGIPHRAPMG 207
           SSS S +  KN   LQSF+PSTPP T  S  R  KRRKGIPHR+PMG
Sbjct: 121 SSS-SIAIGKNITNLQSFSPSTPPLTTSSNCRIVKRRKGIPHRSPMG 166

[Close]

BLAST of Carg24525 vs. TAIR 10
Match: AT1G21000.1 (PLATZ transcription factor family protein )

HSP 1 Score: 234.2 bits (596), Expect = 9.8e-62
Identity = 122/239 (51.05%), Postives = 150/239 (62.76%), Query Frame = 0


Query: 7   EEEDNRWPPWLKPLLRESFFVQCKFHADSHKSECNMYCLDCMNGALCSLCLAYHKDHRAI 66
           EEED   PPWL P+LR S+FV C  H DS+K+ECN++CLDC   A CS CL  HKDHR +
Sbjct: 9   EEEDYTSPPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLVKHKDHRVV 68

Query: 67  QIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERS 126
           QIRRSSYH+V+RV+EIQK +DI  VQTYIINSA++VFLNERPQPR GKGVTNTCE+C RS
Sbjct: 69  QIRRSSYHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPRIGKGVTNTCEICCRS 128

Query: 127 LLDSFRFCSLGCKIVGI---------SKKFVKKRPAMGSDSEDSSSYSSSRNK----NRV 186
           LLDSFRFCSLGCK+ G+         S K    R  +G    D ++  +   K    NR+
Sbjct: 129 LLDSFRFCSLGCKLGGMRRGDLSLTFSLKGKHGREYLGGSESDEATTPTKMRKTNAFNRL 188

Query: 187 VLQ----------------------------SFTPSTPPPTLVSYRTAKRRKGIPHRAP 205
           +                              SF+P TPP  + ++R + RRKG+PHRAP
Sbjct: 189 MSGLSISTVRFDDYGPNGDQRSSSSGDEGGFSFSPGTPP--IYNHRNSSRRKGVPHRAP 245

The following BLAST results are available for this feature:

BLAST of Carg24525 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963765.1	5.6e-120	100.00	uncharacterized protein LOC111463960 [Cucurbita moschata] >XP_022967442.1 unchar...	[more]
XP_038888735.1	1.9e-107	89.59	uncharacterized protein LOC120078532 [Benincasa hispida]	[more]
XP_022159845.1	3.9e-105	90.61	uncharacterized protein LOC111026143, partial [Momordica charantia]	[more]
XP_004136189.1	6.7e-105	88.99	uncharacterized protein LOC101209912 [Cucumis sativus] >XP_008465982.1 PREDICTED...	[more]
XP_022930997.1	5.7e-104	88.58	uncharacterized protein LOC111437323 [Cucurbita moschata] >KAG6606254.1 hypothet...	[more]

BLAST of Carg24525 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3Q4	2.7e-32	47.01	Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
P0CB19	5.3e-04	27.34	Uncharacterized protein At3g50808 OS=Arabidopsis thaliana OX=3702 GN=At3g50808 P...	[more]

BLAST of Carg24525 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HQU7	2.7e-120	100.00	uncharacterized protein LOC111466981 OS=Cucurbita maxima OX=3661 GN=LOC111466981...	[more]
A0A6J1HIX8	2.7e-120	100.00	uncharacterized protein LOC111463960 OS=Cucurbita moschata OX=3662 GN=LOC1114639...	[more]
A0A6J1DZX6	1.9e-105	90.61	uncharacterized protein LOC111026143 OS=Momordica charantia OX=3673 GN=LOC111026...	[more]
A0A5D3E5J1	3.2e-105	88.99	Putative zinc-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3CQ58	3.2e-105	88.99	uncharacterized protein LOC103503550 OS=Cucumis melo OX=3656 GN=LOC103503550 PE=...	[more]

BLAST of Carg24525 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32700.1	2.3e-87	74.53	PLATZ transcription factor family protein	[more]
AT4G17900.1	1.5e-86	75.48	PLATZ transcription factor family protein	[more]
AT1G32700.2	1.8e-68	74.71	PLATZ transcription factor family protein	[more]
AT4G17900.2	2.0e-62	73.65	PLATZ transcription factor family protein	[more]
AT1G21000.1	9.8e-62	51.05	PLATZ transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	PLATZ transcription factor	PFAM	PF04640	PLATZ	coord: 69..140 e-value: 3.6E-30 score: 104.4
None	No IPR available	PANTHER	PTHR31065:SF57	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 6..208
None	No IPR available	PANTHER	PTHR31065	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 6..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24525-RA	Carg24525-RA	mRNA