Carg24516 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24516
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	AT-hook motif nuclear-localized protein
Location	Carg_Chr19: 1863338 .. 1866505 (-)
RNA-Seq Expression	Carg24516
Synteny	Carg24516

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTTGAAAACCCTAATGCATTCAAGTTTATTTCAATAGTTGCCACACGTGAGATTTGACCGTCTTCCTCCTAGTATTGTTGCCCGCTAAAAGAAGAAAAGTTCAGTGGACTTTCCTTTCAAAACCAAAGCATTGCTTTAGGCTTCTCCAAAATAGTTCATACCAATGATCATTCCCTAAATTGGCCGATATGGAACTTTCATCATCCAACATGTCGAACCCTAGATGAGCGGCAAAGTTTCACCTACGCTACGATTTCATAAGATTGAACGTTTTTTCTAGTCGAGGTTAAATTATTATTTATATAAAAGCTCAACAAGTATAAAATTTGTGAGTCCCATCGTAACCTAACCGAGTCGATCAATATAAAAATGGCCGTCCAAGGGTCGGATAAAGGGGACAAAAGTGGGACCCAGCCGCCGCAGGTGGAAGCGCACTCACCCAACTCCAGCCCTCCATTGTTCTTTAATTTTAAAAACAGCAAAAGAAACATAAATAAATAAATAAATAAATAAAAAGTTTGCCCTAATCTTAGTACAAAACCTTAACTCATGGTCAATTTTGTTCTAAACCCTGGTTAACTAATTTGTTTACGTCATTAAATTTCAACTAAATTAATAAAAATATCTTACCAGAAGAATACGATATTTTAAAATTTTCAATAATATTCTTATCCATGAAAAGAAAATCTAAATTATTAATATTTTGTTTCAAAAATATACCTTTTAACTTTAAATTATTTTTCTTTACCATACAATTATAATATATATATATATATATATATATAATATATATATATAATATATATATATATATTTTTTTTATCTGAATTTAATAATATTTTTTTATTAATTATTCTCCAAATATTTTTAAAAATAATTTTTAAATATTTAAACGTAATTTTTAAAAATATGAATTATAAATCTTAATTAAATATTTAAAAATAAATAACTGAAGTTTTATTAAAAATAAAAATTTGAATAAACCCTTTCTTTTTATTTTTTTTTATTTCTTTTTATTTATTTATTTTTTATAGAAAAGCAAAAATATTACCCTTCTAACTTTATTTATATATATATATAGAGAGAGAGTGACAAATTAGATATTAAGCTTTTAAATAATTATTTTTTTAACCTAAGACAACTTCAAAGGAGAAATTGCCCCACCTATTTAAAGGTAATCTAGGTAGATAATTAGTTGATTCTTTTAATTATAGTTTTAATTAAAAAATATATATGGAATAAACTAAAATTACGTCTGGAGGTGAGATCATAAAAATATGATGGTTAAGGAATACTTACGAATTGATAGATGTTATCTGAAAGTAAGTAAAAAGGGTTTTGGAATATGCGTGCAGCCACAAACAACTTACCCTATACATGCATGACCGTGTCATTTACACGCACTACAAGCAACATGCTTTGGACAAGCATGACTGTGACATCTGGCCCAACATTTAGGAGTTTTCTTAAGAAGCATGTGAGTGAAAAGATGGAACAGGCGTGAAACCACAAACAAGCAGCTACAAATAACATGTCTTAGACAAGCATGACTGTCACATCTAGCTGAACATCTAGGAGTTTTCTTAGGAAGCATGTGATGAAACAAGCGTACAATCACAGACAACTTGCCCTATACAAGCATGACTGTCACATTCACACGCGCTACAGGCAACATGTTTTGGACAAGCATGACCATGACATACGGCTCAACATCTAAGAGTTTTGTAGAAAACATGTGAGTAAAAAGATTATTGATTTGTATTGATTTGTGACAAGAGCATTGAGTAACGTAGTTACGTGGTAAAGAAGCAGGTAAACGTCAAAGCAGGACATGAAACGTTACAATAATTCAATCGATCACAACTGTGAGATCCCACATCGATTGAGGAGTAGAACGAAACATTCTTTACAAGGGTGTGAAAACCTCTCCCTAGTAGACGTGTTTTAAAAATCTCGAGGGAAATCTCGATAGTTTGAATCAAAAGCCCAAAGAGGACAATATCTGCTAACAGGTCTGAAGGAAAGCACAAAGAGGACAATATCTACTAGCAGTGGACTTGAGCCGTTACAACGACGATATAACCTTCCCGAACCGATGAAAGATTCAAATTTCTAGCCTCACGGAATCTAAACTTGTGCCACAAACAAAAGGGAAAAGAAAAAAAAAGGAAGAATAACAACAATTTGTCAACTAATTATTATTTTATAATCCATATACTTTAAGCTTAGAGAGAGAGAGAGAGGCATGGAGAGAGAAAGCTTGGGTTGTCTCTAATGGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCATGTATTTATAATTCCAAACTCCAACAGTACCATCTCAAATTGCTCTTTAAATTCATAAAAATTTCACCTTTTTTTTAATATTATTCATAGTTTTCTGTTTAATTCCTTTTCTTTTTCATCCTTATAATAAGCTTTGAGTCCCTCCATCCATGGCTGGCCTGGATTTAAGCAATCACTATATTCACCAACTTCAAAGGCCTGATTTCAACCACCACCAACACCACCACCACCACCAGCCGCCGCCGCCGCCTCTCCACCTGATTCTCAATCGTGTCATGACACCGAATCTCATCATCTCGCCACCGATACGGTGGCGTCTCGCCGACCACGCGGTCGTCCACCCGGTTCCAAAAACAAACCAAAGCCACCGGTCATCATAACTCGAGAAAGCGCAAATACCCTAAGAGCTCATATTCTCGAGATCGGCGGTGGCTGCGACGTCTTCGATAGTATCGCTTCCTACGCTCGCCGCCGTCAGCGTGGGATCTGCATCTTGAGTGGCAGTGGAACGGTAACGAATGTCAACTTACGACAACCGACCGCGGCGGGATCTGTGTTAACCCTACAAGGTAGGTTTGAGATATTATCGCTCACTGGATCTTTCTTACCGCCACCAGCTCCTCCCGGCGCTACCAGTTTGACCATATACTTGGCTGGTGGGCAAGGGCAAGTGGTCGGCGGTAACGTCGTCGGAGAATTGATGGCGGCCGGACCAGTGACGGTGATCACCGCTTCGTTTACGAATGTAGCATACGAGAGATTGCCACTGGAAGACGAAGAACAAGAACAAGAACAAGAAAGAACAAGATCAGGTTCAGATGCAACCACCGACATCGCACGGAAACAATAA

mRNA sequence

ATGGAGCTTGAAAACCCTAATGCATTCAAGTTTATTTCAATAGTTGCCACACCCGCCGCCGCCGCCTCTCCACCTGATTCTCAATCGTGTCATGACACCGAATCTCATCATCTCGCCACCGATACGGTGGCGTCTCGCCGACCACGCGGTCGTCCACCCGGTTCCAAAAACAAACCAAAGCCACCGGTCATCATAACTCGAGAAAGCGCAAATACCCTAAGAGCTCATATTCTCGAGATCGGCGGTGGCTGCGACGTCTTCGATAGTATCGCTTCCTACGCTCGCCGCCGTCAGCGTGGGATCTGCATCTTGAGTGGCAGTGGAACGGTAACGAATGTCAACTTACGACAACCGACCGCGGCGGGATCTGTGTTAACCCTACAAGGTAGGTTTGAGATATTATCGCTCACTGGATCTTTCTTACCGCCACCAGCTCCTCCCGGCGCTACCAGTTTGACCATATACTTGGCTGGTGGGCAAGGGCAAGTGGTCGGCGGTAACGTCGTCGGAGAATTGATGGCGGCCGGACCAGTGACGGTGATCACCGCTTCGTTTACGAATGTAGCATACGAGAGATTGCCACTGGAAGACGAAGAACAAGAACAAGAACAAGAAAGAACAAGATCAGGTTCAGATGCAACCACCGACATCGCACGGAAACAATAA

Coding sequence (CDS)

ATGGAGCTTGAAAACCCTAATGCATTCAAGTTTATTTCAATAGTTGCCACACCCGCCGCCGCCGCCTCTCCACCTGATTCTCAATCGTGTCATGACACCGAATCTCATCATCTCGCCACCGATACGGTGGCGTCTCGCCGACCACGCGGTCGTCCACCCGGTTCCAAAAACAAACCAAAGCCACCGGTCATCATAACTCGAGAAAGCGCAAATACCCTAAGAGCTCATATTCTCGAGATCGGCGGTGGCTGCGACGTCTTCGATAGTATCGCTTCCTACGCTCGCCGCCGTCAGCGTGGGATCTGCATCTTGAGTGGCAGTGGAACGGTAACGAATGTCAACTTACGACAACCGACCGCGGCGGGATCTGTGTTAACCCTACAAGGTAGGTTTGAGATATTATCGCTCACTGGATCTTTCTTACCGCCACCAGCTCCTCCCGGCGCTACCAGTTTGACCATATACTTGGCTGGTGGGCAAGGGCAAGTGGTCGGCGGTAACGTCGTCGGAGAATTGATGGCGGCCGGACCAGTGACGGTGATCACCGCTTCGTTTACGAATGTAGCATACGAGAGATTGCCACTGGAAGACGAAGAACAAGAACAAGAACAAGAAAGAACAAGATCAGGTTCAGATGCAACCACCGACATCGCACGGAAACAATAA

Protein sequence

MELENPNAFKFISIVATPAAAASPPDSQSCHDTESHHLATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQEQERTRSGSDATTDIARKQ

Homology

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BLAST of Carg24516 vs. NCBI nr
Match: KAG7011396.1 (AT-hook motif nuclear-localized protein 21, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 429.5 bits (1103), Expect = 1.8e-116
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MELENPNAFKFISIVATPAAAASPPDSQSCHDTESHHLATDTVASRRPRGRPPGSKNKPK 60
           MELENPNAFKFISIVATPAAAASPPDSQSCHDTESHHLATDTVASRRPRGRPPGSKNKPK
Sbjct: 1   MELENPNAFKFISIVATPAAAASPPDSQSCHDTESHHLATDTVASRRPRGRPPGSKNKPK 60

Query: 61  PPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTA 120
           PPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTA
Sbjct: 61  PPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTA 120

Query: 121 AGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTV 180
           AGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTV
Sbjct: 121 AGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTV 180

Query: 181 ITASFTNVAYERLPLEDEEQEQEQERTRSGSDATTDIARKQ 222
           ITASFTNVAYERLPLEDEEQEQEQERTRSGSDATTDIARKQ
Sbjct: 181 ITASFTNVAYERLPLEDEEQEQEQERTRSGSDATTDIARKQ 221

[Close]

BLAST of Carg24516 vs. NCBI nr
Match: KAG6571671.1 (AT-hook motif nuclear-localized protein 21, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 359.0 bits (920), Expect = 2.9e-95
Identity = 182/183 (99.45%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 24  PPDSQSCHDTESHHLATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGG 83
           PPDSQSCHDTESHHLATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGG
Sbjct: 35  PPDSQSCHDTESHHLATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGG 94

Query: 84  CDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPP 143
           CDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPP
Sbjct: 95  CDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPP 154

Query: 144 PAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQE 203
           PAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQE
Sbjct: 155 PAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQE 214

Query: 204 QER 207
           QE+
Sbjct: 215 QEQ 217

[Close]

BLAST of Carg24516 vs. NCBI nr
Match: XP_023511574.1 (AT-hook motif nuclear-localized protein 23-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.8 bits (917), Expect = 6.6e-95
Identity = 181/183 (98.91%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 24  PPDSQSCHDTESHHLATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGG 83
           PPDSQSCHDTESHHLATDTVASRRPRGRPPGSKN+PKPPVIITRESANTLRAHILEIGGG
Sbjct: 32  PPDSQSCHDTESHHLATDTVASRRPRGRPPGSKNRPKPPVIITRESANTLRAHILEIGGG 91

Query: 84  CDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPP 143
           CDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPP
Sbjct: 92  CDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPP 151

Query: 144 PAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQE 203
           PAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQE
Sbjct: 152 PAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQE 211

Query: 204 QER 207
           QE+
Sbjct: 212 QEQ 214

[Close]

BLAST of Carg24516 vs. NCBI nr
Match: XP_022963487.1 (AT-hook motif nuclear-localized protein 23-like [Cucurbita moschata])

HSP 1 Score: 355.1 bits (910), Expect = 4.2e-94
Identity = 180/183 (98.36%), Postives = 181/183 (98.91%), Query Frame = 0


Query: 24  PPDSQSCHDTESHHLATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGG 83
           PPDSQSCHDTESHHLATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGG
Sbjct: 35  PPDSQSCHDTESHHLATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGG 94

Query: 84  CDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPP 143
           CDVFDSIASYARRRQRGICILSGSG VTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPP
Sbjct: 95  CDVFDSIASYARRRQRGICILSGSGMVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPP 154

Query: 144 PAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQE 203
           PAPPG TSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQE
Sbjct: 155 PAPPGTTSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQE 214

Query: 204 QER 207
           QE+
Sbjct: 215 QEQ 217

[Close]

BLAST of Carg24516 vs. NCBI nr
Match: XP_022967427.1 (AT-hook motif nuclear-localized protein 23-like [Cucurbita maxima])

HSP 1 Score: 351.3 bits (900), Expect = 6.1e-93
Identity = 177/183 (96.72%), Postives = 181/183 (98.91%), Query Frame = 0


Query: 24  PPDSQSCHDTESHHLATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGG 83
           PPDSQSCHDTESHH +TD VASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGG
Sbjct: 34  PPDSQSCHDTESHHPSTDMVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGG 93

Query: 84  CDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPP 143
           CDVFDSIASYARRRQRGICILSG+GTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPP
Sbjct: 94  CDVFDSIASYARRRQRGICILSGTGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPP 153

Query: 144 PAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQE 203
           PAPPGATSLTIYLAGGQGQVVGGNV+GELMAAGPVTVITASFTNVAYERLPLEDEEQEQE
Sbjct: 154 PAPPGATSLTIYLAGGQGQVVGGNVIGELMAAGPVTVITASFTNVAYERLPLEDEEQEQE 213

Query: 204 QER 207
           QE+
Sbjct: 214 QEQ 216

[Close]

BLAST of Carg24516 vs. ExPASy Swiss-Prot
Match: O23620 (AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AHL23 PE=1 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.5e-73
Identity = 136/161 (84.47%), Postives = 152/161 (94.41%), Query Frame = 0


Query: 43  VASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGIC 102
           V  RRPRGRPPGSKNKPKPPVIITRESANTLRAHILE+  GCDVFD +A+YARRRQRGIC
Sbjct: 79  VVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVTNGCDVFDCVATYARRRQRGIC 138

Query: 103 ILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQ 162
           +LSGSGTVTNV++RQP+AAG+V+TLQG FEILSL+GSFLPPPAPPGATSLTI+LAGGQGQ
Sbjct: 139 VLSGSGTVTNVSIRQPSAAGAVVTLQGTFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQ 198

Query: 163 VVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQE 204
           VVGG+VVGEL AAGPV VI ASFTNVAYERLPLE++EQ+Q+
Sbjct: 199 VVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEDEQQQQ 239

[Close]

BLAST of Carg24516 vs. ExPASy Swiss-Prot
Match: O82166 (AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AHL21 PE=2 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 5.3e-71
Identity = 135/189 (71.43%), Postives = 155/189 (82.01%), Query Frame = 0


Query: 31  HDTESHHLATDTVAS-------------------RRPRGRPPGSKNKPKPPVIITRESAN 90
           H   +HH   D +AS                   RRPRGRP GSKNKPKPPVI+TRESAN
Sbjct: 44  HHNHNHHQGLDLIASNDNSGLGGGGGGGSGDLVMRRPRGRPAGSKNKPKPPVIVTRESAN 103

Query: 91  TLRAHILEIGGGCDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRF 150
           TLRAHILE+G GCDVF+ I++YARRRQRGIC+LSG+GTVTNV++RQPTAAG+V+TL+G F
Sbjct: 104 TLRAHILEVGSGCDVFECISTYARRRQRGICVLSGTGTVTNVSIRQPTAAGAVVTLRGTF 163

Query: 151 EILSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYE 201
           EILSL+GSFLPPPAPPGATSLTI+LAG QGQVVGGNVVGELMAAGPV V+ ASFTNVAYE
Sbjct: 164 EILSLSGSFLPPPAPPGATSLTIFLAGAQGQVVGGNVVGELMAAGPVMVMAASFTNVAYE 223

[Close]

BLAST of Carg24516 vs. ExPASy Swiss-Prot
Match: O49662 (AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AHL24 PE=2 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 6.4e-61
Identity = 112/164 (68.29%), Postives = 140/164 (85.37%), Query Frame = 0


Query: 41  DTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRG 100
           D   +RRPRGRP GSKNKPKPP+IITR+SAN LR H++EIG GCD+ +S+A++ARRRQRG
Sbjct: 100 DHQMTRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEIGDGCDLVESVATFARRRQRG 159

Query: 101 ICILSGSGTVTNVNLRQP---TAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLA 160
           +C++SG+G VTNV +RQP    + GSV++L GRFEILSL+GSFLPPPAPP AT L++YLA
Sbjct: 160 VCVMSGTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFLPPPAPPTATGLSVYLA 219

Query: 161 GGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQE 202
           GGQGQVVGG+VVG L+ AGPV V+ ASF+N AYERLPLE++E +
Sbjct: 220 GGQGQVVGGSVVGPLLCAGPVVVMAASFSNAAYERLPLEEDEMQ 263

[Close]

BLAST of Carg24516 vs. ExPASy Swiss-Prot
Match: O22130 (AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AHL22 PE=1 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.4e-60
Identity = 112/167 (67.07%), Postives = 139/167 (83.23%), Query Frame = 0


Query: 41  DTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRG 100
           D   +RRPRGRP GSKNKPKPP+IITR+SAN L++H++E+  GCDV +S+  +ARRRQRG
Sbjct: 84  DNHITRRPRGRPAGSKNKPKPPIIITRDSANALKSHVMEVANGCDVMESVTVFARRRQRG 143

Query: 101 ICILSGSGTVTNVNLRQPTA----AGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYL 160
           IC+LSG+G VTNV +RQP +      SV+ L GRFEILSL+GSFLPPPAPP A+ LTIYL
Sbjct: 144 ICVLSGNGAVTNVTIRQPASVPGGGSSVVNLHGRFEILSLSGSFLPPPAPPAASGLTIYL 203

Query: 161 AGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQE 204
           AGGQGQVVGG+VVG LMA+GPV ++ ASF N AYERLPLE+++QE++
Sbjct: 204 AGGQGQVVGGSVVGPLMASGPVVIMAASFGNAAYERLPLEEDDQEEQ 250

[Close]

BLAST of Carg24516 vs. ExPASy Swiss-Prot
Match: Q9SZ70 (AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AHL26 PE=2 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 7.1e-60
Identity = 109/158 (68.99%), Postives = 138/158 (87.34%), Query Frame = 0


Query: 45  SRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICIL 104
           +RRPRGRP GSKNKPK P+IITR+SAN LR H++EIG GCD+ D +A++ARRRQRG+C++
Sbjct: 117 TRRPRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVCVM 176

Query: 105 SGSGTVTNVNLRQP-TAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQV 164
           SG+G+VTNV +RQP +  GSV++L GRFEILSL+GSFLPPPAPP AT L++YLAGGQGQV
Sbjct: 177 SGTGSVTNVTIRQPGSPPGSVVSLHGRFEILSLSGSFLPPPAPPAATGLSVYLAGGQGQV 236

Query: 165 VGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQE 202
           VGG+VVG L+ +GPV V+ ASF+N AYERLPLE++E +
Sbjct: 237 VGGSVVGPLLCSGPVVVMAASFSNAAYERLPLEEDEMQ 274

[Close]

BLAST of Carg24516 vs. ExPASy TrEMBL
Match: A0A6J1HFD9 (AT-hook motif nuclear-localized protein OS=Cucurbita moschata OX=3662 GN=LOC111463806 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 2.1e-94
Identity = 180/183 (98.36%), Postives = 181/183 (98.91%), Query Frame = 0


Query: 24  PPDSQSCHDTESHHLATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGG 83
           PPDSQSCHDTESHHLATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGG
Sbjct: 35  PPDSQSCHDTESHHLATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGG 94

Query: 84  CDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPP 143
           CDVFDSIASYARRRQRGICILSGSG VTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPP
Sbjct: 95  CDVFDSIASYARRRQRGICILSGSGMVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPP 154

Query: 144 PAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQE 203
           PAPPG TSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQE
Sbjct: 155 PAPPGTTSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQE 214

Query: 204 QER 207
           QE+
Sbjct: 215 QEQ 217

[Close]

BLAST of Carg24516 vs. ExPASy TrEMBL
Match: A0A6J1HQT4 (AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111466969 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 3.0e-93
Identity = 177/183 (96.72%), Postives = 181/183 (98.91%), Query Frame = 0


Query: 24  PPDSQSCHDTESHHLATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGG 83
           PPDSQSCHDTESHH +TD VASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGG
Sbjct: 34  PPDSQSCHDTESHHPSTDMVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGG 93

Query: 84  CDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPP 143
           CDVFDSIASYARRRQRGICILSG+GTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPP
Sbjct: 94  CDVFDSIASYARRRQRGICILSGTGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPP 153

Query: 144 PAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQE 203
           PAPPGATSLTIYLAGGQGQVVGGNV+GELMAAGPVTVITASFTNVAYERLPLEDEEQEQE
Sbjct: 154 PAPPGATSLTIYLAGGQGQVVGGNVIGELMAAGPVTVITASFTNVAYERLPLEDEEQEQE 213

Query: 204 QER 207
           QE+
Sbjct: 214 QEQ 216

[Close]

BLAST of Carg24516 vs. ExPASy TrEMBL
Match: A0A0A0LI46 (AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902390 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.9e-80
Identity = 159/190 (83.68%), Postives = 170/190 (89.47%), Query Frame = 0


Query: 25  PDSQSCHDTES--HH-------LATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRA 84
           PDSQS HD +   HH         TD VASRRPRGRPPGSKNKPKPPVIITRESANTLRA
Sbjct: 32  PDSQSRHDDDDSPHHPLEFVPTTTTDMVASRRPRGRPPGSKNKPKPPVIITRESANTLRA 91

Query: 85  HILEIGGGCDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILS 144
           HILE+G GCDVFD IA+YARRRQRGICILSG+G VTNVNLRQPTA GSVLTLQGRFEILS
Sbjct: 92  HILEVGSGCDVFDCIATYARRRQRGICILSGNGMVTNVNLRQPTATGSVLTLQGRFEILS 151

Query: 145 LTGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPL 204
           L+GSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGEL+AAGPVT+I ASFTNVAYERLPL
Sbjct: 152 LSGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELVAAGPVTIIAASFTNVAYERLPL 211

Query: 205 EDEEQEQEQE 206
           ED+EQEQ+++
Sbjct: 212 EDQEQEQQEQ 221

[Close]

BLAST of Carg24516 vs. ExPASy TrEMBL
Match: A0A5A7T556 (AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004370 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 4.9e-80
Identity = 159/192 (82.81%), Postives = 170/192 (88.54%), Query Frame = 0


Query: 25  PDSQSCHDTES--HH---------LATDTVASRRPRGRPPGSKNKPKPPVIITRESANTL 84
           PDSQS HD +   HH           TD VASRRPRGRPPGSKNKPKPPVIITRESANTL
Sbjct: 31  PDSQSHHDDDESPHHPLEFVPTTATTTDMVASRRPRGRPPGSKNKPKPPVIITRESANTL 90

Query: 85  RAHILEIGGGCDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEI 144
           RAHILE+G GCDVFDSIA+YARRRQRGICILSG+G V NVNLRQPTA GSVLTLQGRFEI
Sbjct: 91  RAHILEVGSGCDVFDSIATYARRRQRGICILSGNGMVNNVNLRQPTATGSVLTLQGRFEI 150

Query: 145 LSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERL 204
           LSL+GSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGEL+AAGPVT+I ASFTNVAYERL
Sbjct: 151 LSLSGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELVAAGPVTIIAASFTNVAYERL 210

Query: 205 PLEDEEQEQEQE 206
           PLED+EQEQ+++
Sbjct: 211 PLEDQEQEQQEQ 222

[Close]

BLAST of Carg24516 vs. ExPASy TrEMBL
Match: A0A1S3CQ43 (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103503535 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 4.9e-80
Identity = 159/192 (82.81%), Postives = 170/192 (88.54%), Query Frame = 0


Query: 25  PDSQSCHDTES--HH---------LATDTVASRRPRGRPPGSKNKPKPPVIITRESANTL 84
           PDSQS HD +   HH           TD VASRRPRGRPPGSKNKPKPPVIITRESANTL
Sbjct: 31  PDSQSHHDDDESPHHPLEFVPTTATTTDMVASRRPRGRPPGSKNKPKPPVIITRESANTL 90

Query: 85  RAHILEIGGGCDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEI 144
           RAHILE+G GCDVFDSIA+YARRRQRGICILSG+G V NVNLRQPTA GSVLTLQGRFEI
Sbjct: 91  RAHILEVGSGCDVFDSIATYARRRQRGICILSGNGMVNNVNLRQPTATGSVLTLQGRFEI 150

Query: 145 LSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERL 204
           LSL+GSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGEL+AAGPVT+I ASFTNVAYERL
Sbjct: 151 LSLSGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELVAAGPVTIIAASFTNVAYERL 210

Query: 205 PLEDEEQEQEQE 206
           PLED+EQEQ+++
Sbjct: 211 PLEDQEQEQQEQ 222

[Close]

BLAST of Carg24516 vs. TAIR 10
Match: AT4G17800.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 276.6 bits (706), Expect = 1.8e-74
Identity = 136/161 (84.47%), Postives = 152/161 (94.41%), Query Frame = 0


Query: 43  VASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGIC 102
           V  RRPRGRPPGSKNKPKPPVIITRESANTLRAHILE+  GCDVFD +A+YARRRQRGIC
Sbjct: 79  VVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVTNGCDVFDCVATYARRRQRGIC 138

Query: 103 ILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQ 162
           +LSGSGTVTNV++RQP+AAG+V+TLQG FEILSL+GSFLPPPAPPGATSLTI+LAGGQGQ
Sbjct: 139 VLSGSGTVTNVSIRQPSAAGAVVTLQGTFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQ 198

Query: 163 VVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQE 204
           VVGG+VVGEL AAGPV VI ASFTNVAYERLPLE++EQ+Q+
Sbjct: 199 VVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEDEQQQQ 239

[Close]

BLAST of Carg24516 vs. TAIR 10
Match: AT2G35270.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 268.9 bits (686), Expect = 3.7e-72
Identity = 135/189 (71.43%), Postives = 155/189 (82.01%), Query Frame = 0


Query: 31  HDTESHHLATDTVAS-------------------RRPRGRPPGSKNKPKPPVIITRESAN 90
           H   +HH   D +AS                   RRPRGRP GSKNKPKPPVI+TRESAN
Sbjct: 44  HHNHNHHQGLDLIASNDNSGLGGGGGGGSGDLVMRRPRGRPAGSKNKPKPPVIVTRESAN 103

Query: 91  TLRAHILEIGGGCDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRF 150
           TLRAHILE+G GCDVF+ I++YARRRQRGIC+LSG+GTVTNV++RQPTAAG+V+TL+G F
Sbjct: 104 TLRAHILEVGSGCDVFECISTYARRRQRGICVLSGTGTVTNVSIRQPTAAGAVVTLRGTF 163

Query: 151 EILSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYE 201
           EILSL+GSFLPPPAPPGATSLTI+LAG QGQVVGGNVVGELMAAGPV V+ ASFTNVAYE
Sbjct: 164 EILSLSGSFLPPPAPPGATSLTIFLAGAQGQVVGGNVVGELMAAGPVMVMAASFTNVAYE 223

[Close]

BLAST of Carg24516 vs. TAIR 10
Match: AT4G22810.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 235.3 bits (599), Expect = 4.6e-62
Identity = 112/164 (68.29%), Postives = 140/164 (85.37%), Query Frame = 0


Query: 41  DTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRG 100
           D   +RRPRGRP GSKNKPKPP+IITR+SAN LR H++EIG GCD+ +S+A++ARRRQRG
Sbjct: 100 DHQMTRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEIGDGCDLVESVATFARRRQRG 159

Query: 101 ICILSGSGTVTNVNLRQP---TAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLA 160
           +C++SG+G VTNV +RQP    + GSV++L GRFEILSL+GSFLPPPAPP AT L++YLA
Sbjct: 160 VCVMSGTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFLPPPAPPTATGLSVYLA 219

Query: 161 GGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQE 202
           GGQGQVVGG+VVG L+ AGPV V+ ASF+N AYERLPLE++E +
Sbjct: 220 GGQGQVVGGSVVGPLLCAGPVVVMAASFSNAAYERLPLEEDEMQ 263

[Close]

BLAST of Carg24516 vs. TAIR 10
Match: AT2G45430.1 (AT-hook motif nuclear-localized protein 22 )

HSP 1 Score: 234.2 bits (596), Expect = 1.0e-61
Identity = 112/167 (67.07%), Postives = 139/167 (83.23%), Query Frame = 0


Query: 41  DTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRG 100
           D   +RRPRGRP GSKNKPKPP+IITR+SAN L++H++E+  GCDV +S+  +ARRRQRG
Sbjct: 84  DNHITRRPRGRPAGSKNKPKPPIIITRDSANALKSHVMEVANGCDVMESVTVFARRRQRG 143

Query: 101 ICILSGSGTVTNVNLRQPTA----AGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYL 160
           IC+LSG+G VTNV +RQP +      SV+ L GRFEILSL+GSFLPPPAPP A+ LTIYL
Sbjct: 144 ICVLSGNGAVTNVTIRQPASVPGGGSSVVNLHGRFEILSLSGSFLPPPAPPAASGLTIYL 203

Query: 161 AGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQE 204
           AGGQGQVVGG+VVG LMA+GPV ++ ASF N AYERLPLE+++QE++
Sbjct: 204 AGGQGQVVGGSVVGPLMASGPVVIMAASFGNAAYERLPLEEDDQEEQ 250

[Close]

BLAST of Carg24516 vs. TAIR 10
Match: AT4G12050.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 231.9 bits (590), Expect = 5.1e-61
Identity = 109/158 (68.99%), Postives = 138/158 (87.34%), Query Frame = 0


Query: 45  SRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICIL 104
           +RRPRGRP GSKNKPK P+IITR+SAN LR H++EIG GCD+ D +A++ARRRQRG+C++
Sbjct: 117 TRRPRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVCVM 176

Query: 105 SGSGTVTNVNLRQP-TAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQV 164
           SG+G+VTNV +RQP +  GSV++L GRFEILSL+GSFLPPPAPP AT L++YLAGGQGQV
Sbjct: 177 SGTGSVTNVTIRQPGSPPGSVVSLHGRFEILSLSGSFLPPPAPPAATGLSVYLAGGQGQV 236

Query: 165 VGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQE 202
           VGG+VVG L+ +GPV V+ ASF+N AYERLPLE++E +
Sbjct: 237 VGGSVVGPLLCSGPVVVMAASFSNAAYERLPLEEDEMQ 274

The following BLAST results are available for this feature:

BLAST of Carg24516 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7011396.1	1.8e-116	100.00	AT-hook motif nuclear-localized protein 21, partial [Cucurbita argyrosperma subs...	[more]
KAG6571671.1	2.9e-95	99.45	AT-hook motif nuclear-localized protein 21, partial [Cucurbita argyrosperma subs...	[more]
XP_023511574.1	6.6e-95	98.91	AT-hook motif nuclear-localized protein 23-like [Cucurbita pepo subsp. pepo]	[more]
XP_022963487.1	4.2e-94	98.36	AT-hook motif nuclear-localized protein 23-like [Cucurbita moschata]	[more]
XP_022967427.1	6.1e-93	96.72	AT-hook motif nuclear-localized protein 23-like [Cucurbita maxima]	[more]

BLAST of Carg24516 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23620	2.5e-73	84.47	AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O82166	5.3e-71	71.43	AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O49662	6.4e-61	68.29	AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O22130	1.4e-60	67.07	AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q9SZ70	7.1e-60	68.99	AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]

BLAST of Carg24516 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HFD9	2.1e-94	98.36	AT-hook motif nuclear-localized protein OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1HQT4	3.0e-93	96.72	AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111466...	[more]
A0A0A0LI46	2.9e-80	83.68	AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_3G9023...	[more]
A0A5A7T556	4.9e-80	82.81	AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3CQ43	4.9e-80	82.81	AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103503535 ...	[more]

BLAST of Carg24516 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17800.1	1.8e-74	84.47	Predicted AT-hook DNA-binding family protein	[more]
AT2G35270.1	3.7e-72	71.43	Predicted AT-hook DNA-binding family protein	[more]
AT4G22810.1	4.6e-62	68.29	Predicted AT-hook DNA-binding family protein	[more]
AT2G45430.1	1.0e-61	67.07	AT-hook motif nuclear-localized protein 22	[more]
AT4G12050.1	5.1e-61	68.99	Predicted AT-hook DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014476	AT-hook motif nuclear-localized protein 15-29	PIRSF	PIRSF016021	ESCAROLA	coord: 17..221 e-value: 1.9E-98 score: 327.2
IPR014476	AT-hook motif nuclear-localized protein 15-29	PANTHER	PTHR31100	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15	coord: 31..213
IPR005175	PPC domain	PFAM	PF03479	PCC	coord: 74..187 e-value: 6.5E-29 score: 100.5
IPR005175	PPC domain	PROSITE	PS51742	PPC	coord: 70..208 score: 38.269348
IPR005175	PPC domain	CDD	cd11378	DUF296	coord: 74..157 e-value: 1.53038E-20 score: 81.0926
None	No IPR available	GENE3D	3.30.1330.80		coord: 73..206 e-value: 2.6E-24 score: 87.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..63
None	No IPR available	PANTHER	PTHR31100:SF68	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN	coord: 31..213
None	No IPR available	SUPERFAMILY	117856	AF0104/ALDC/Ptd012-like	coord: 70..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24516-RA	Carg24516-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003680	minor groove of adenine-thymine-rich DNA binding