Carg24492 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24492
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	PRA1 family protein
Location	Carg_Chr04: 617320 .. 620428 (+)
RNA-Seq Expression	Carg24492
Synteny	Carg24492

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAGAGAAAATATAAAAGAAGTTGATAAGGTTGGATGGATGTGCAAATGAAGAGGTTTTTCATAGATACGTTTTAATTAGGGAGAACTCTTCACACGCAGCCCATCATTTATTTATTTGTTTATTATATGGATAGGTATCTTTATTATATTGATAGTGGTGTTTATCCATAACCTATAGGTATGTGTCATAACTGTCAGTTTTGTATTTGTTATGTCTTTCTGAACTTTAAAATGTTAAAATTCATATAAGACAAAATTGAAATAGGTATCTAACAAGATCTTAAACTTACAATTTTAAGGTTTAATAGGTCCGTAATTTAAAAATACAAAACTCATTAGATACATACTTGATAGTCTAAAAGCTTATTAAACGCTCCTTAAAGTTTAAACATCTATACAACATAAAGCTTTAAATTTTATATTAGATAGAGATAGTTTGGTTTAAAAACCTATCAAACATAAAATACCAAATTCATGGGTGATAATTCAAAAACGATTAATAAAACACAAATCTTTTAGATAATTTTTACAAAATTTGAACTAAACTGATATAATTGAAAGTTTATGAATGCATATTTAACCTTTTTTTTTCTTTTTAATAAAAAATAGAAGTCTATATGAGTAGGCATCTAATTCCTTCTGGGGTCTACAACACCTTAGACTTCAAAGAATCTTGAAAAATGAGAGATTACCATACTTATAAAATATTGAAAAAAACCCTTTTCATTTTTTTACGCGTTTATTGATCTTGTATGTTCTGTCTTCAATAATGTTCATTCGTTTTATCCAAATATTTTTTATTCATAAATATTTATATAAATTAACTAAAACATTAGCAGGTTTAGTTACATTTTTTTCAAAATTATTTTAAGACACAAATTTATTTGATTTGTTCAACATCTAAAATGTTTCTATTAATATTAAATTACTATAAGAAAACCACTATTAATATGAACTAATTAAGTTAAATATTGTATTTAAAACGCTATAACAGTTGATTAACAGGTCGTTGTCAATGTAGTCAATAGGGTTGTAGCTGGAGGTGGACATGGAAGATAGTTGCTAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAGAGATCGTCAAACTTGTCGGTAGCAACGGCAGGGGCTGTGATGGTCACCAATGTGAGAGGTAGTGTGAGTATTTTGATCACTTTTATATGCTTTAAAAATTTGGTACGGATTACATGTTAAACACTAAAAAAAATATTTTTTTCAAAAATTTTTCTTTAAAAGTGACTTATTTCTCAAATTTATTTATTTATTTTTAAATAAAAAATTCATTTTGAATGGTTGCTAAACACTATAGATTTTTATAAAATATTTTTTTTAACCAAATGTATCCTAAGACTAATTAATATTTTTCTAAGATTAATTCAATTATCTACTTGTAGCATTTAAATTTCCAAGTTTTTAATTATTTGTGAAGAAATAATTATAAATAAAAAAAATTAAATTTAAATCGTTACATGGAATTTTAGCATCAAAGTTTAATTAGATCCGTTTTTCAACCTTACGGTGGGATCCCATATCTCTTTAATTTTATGCGAGAAAAAATGACATTTTTACTATTTATAATATTTTGTTATTTTTTATTTGGATAACAATGAATACTTTCATTATTCTGCCCAACCCCCACAGATTCCCATTTAATTTAGGTCATAATTATTTATATTTTCTCTTTTATTCCCTTCTTTTTTCGCCTATAGATATATAGTATATAATTATTTTATTGTTCGAAAGCTAACTATAAATAATAATAATAATAATAATAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAAAATGTAGTGCTGAAAAAGTTTAATTCTTTATTAACCTTTAGTCATGACCTAAACGGAAGTGAGATTCAATTTTATGACTTGCACCCTCGAGAGGTCAACTTTGTTTGTGGAGGCCAATGACCGCTCTTGTGAGATTAGCCTCTTGGTTTTTGGTCTAACACTTAAAGTTCATGGTTGGGAATTTCTTTTTCAACGTGATCTATTGCTTAAACTAGACGATGTCAATCTATTCTATTTTTGTTTGATGCTTAATGTATCAGTATTATTCGATTCTTAAGATGTTGTTTAACATTGATTAAGATTCAAACGAGACTTTGATGTTTATATATTGAATGGATGTACCGTATAAATATGAGTGTGATCGAAACTATAAATATGAACCTCATGATCCGTTCTAAAGATATAAAAATAAAATAAAAACTCTGAAGGGCGAAGTTACAAGTTGCCCACCTATATATATAAATATATATATAGACAACCGCGTGAAGGGCCTCAATTCCTTTGGGTTTTTTCTACGAACAAATAAATTCTCTGAAACCCCGCGGTATTAATTTTGCAGAGTACCGCCAGATCTCGCTCTCCTCCACCAATGGCTTCTCCACCGACACTTCCGATTTCCGGCCATCAGTCGGCCACCGGAGCTCCATCTCAACCGCCCATCGCCACCCCGGCCTTCCGCGCATTTCTCTCTCGGTTAACTTCCTCCGTCCGCCAAGGCTTCTCCCAACGCCGCCCCTGGTCGGAGCTCGTCGATCGGAGCTCCTTCGCTCGTCCCCTCAACCTATCCGAAGCCTATTCCCGGATCCGCAAGAACTTTTCATATTTCCGTGTCAATTATATCACTCTCTTGACCCTTGTTCTCGCTTTTTCTCTCCTCTCCCATCCGTTCTCTCTCTTGACTCTTCTTGCCCTCCTCGCGGCTTGGAGTTTTCTCTACATTTTCCGTCCTTCCGATCAGCCTTTGGTTATTCGCGGCCGTACTTTTTCCGATTTCGAGACGTTGGTCGGGTTGGGGGTTCTGACTGTGATTGTTGTGTTTCTCACTAGTGTTGGATCGCTTCTGATATCGGCGTCGATGATTGGATTTTCCATTGTGTGCATTCACGGTGCGTTTAGGCTTCCAGAGGATCTCTTCCTTGATGACCAAGAGCCTGCAAATGGAGGGTTCCTGTCATTTCTCGGTGGCGCGGCCACCGCTGCTTCAGCCGCAGGTCCTGCAATTGCAGCGCGTGTATAG

mRNA sequence

ATGAAGAGAGAAAATATAAAAGAAGTTGATAAGAGATCGTCAAACTTGTCGGTAGCAACGGCAGGGGCTGTGATGGTCACCAATGTGAGAGGTAGTAGTACCGCCAGATCTCGCTCTCCTCCACCAATGGCTTCTCCACCGACACTTCCGATTTCCGGCCATCAGTCGGCCACCGGAGCTCCATCTCAACCGCCCATCGCCACCCCGGCCTTCCGCGCATTTCTCTCTCGGTTAACTTCCTCCGTCCGCCAAGGCTTCTCCCAACGCCGCCCCTGGTCGGAGCTCGTCGATCGGAGCTCCTTCGCTCGTCCCCTCAACCTATCCGAAGCCTATTCCCGGATCCGCAAGAACTTTTCATATTTCCGTGTCAATTATATCACTCTCTTGACCCTTGTTCTCGCTTTTTCTCTCCTCTCCCATCCGTTCTCTCTCTTGACTCTTCTTGCCCTCCTCGCGGCTTGGAGTTTTCTCTACATTTTCCGTCCTTCCGATCAGCCTTTGGTTATTCGCGGCCGTACTTTTTCCGATTTCGAGACGTTGGTCGGGTTGGGGGTTCTGACTGTGATTGTTGTGTTTCTCACTAGTGTTGGATCGCTTCTGATATCGGCGTCGATGATTGGATTTTCCATTGTGTGCATTCACGGTGCGTTTAGGCTTCCAGAGGATCTCTTCCTTGATGACCAAGAGCCTGCAAATGGAGGGTTCCTGTCATTTCTCGGTGGCGCGGCCACCGCTGCTTCAGCCGCAGGTCCTGCAATTGCAGCGCGTGTATAG

Coding sequence (CDS)

ATGAAGAGAGAAAATATAAAAGAAGTTGATAAGAGATCGTCAAACTTGTCGGTAGCAACGGCAGGGGCTGTGATGGTCACCAATGTGAGAGGTAGTAGTACCGCCAGATCTCGCTCTCCTCCACCAATGGCTTCTCCACCGACACTTCCGATTTCCGGCCATCAGTCGGCCACCGGAGCTCCATCTCAACCGCCCATCGCCACCCCGGCCTTCCGCGCATTTCTCTCTCGGTTAACTTCCTCCGTCCGCCAAGGCTTCTCCCAACGCCGCCCCTGGTCGGAGCTCGTCGATCGGAGCTCCTTCGCTCGTCCCCTCAACCTATCCGAAGCCTATTCCCGGATCCGCAAGAACTTTTCATATTTCCGTGTCAATTATATCACTCTCTTGACCCTTGTTCTCGCTTTTTCTCTCCTCTCCCATCCGTTCTCTCTCTTGACTCTTCTTGCCCTCCTCGCGGCTTGGAGTTTTCTCTACATTTTCCGTCCTTCCGATCAGCCTTTGGTTATTCGCGGCCGTACTTTTTCCGATTTCGAGACGTTGGTCGGGTTGGGGGTTCTGACTGTGATTGTTGTGTTTCTCACTAGTGTTGGATCGCTTCTGATATCGGCGTCGATGATTGGATTTTCCATTGTGTGCATTCACGGTGCGTTTAGGCTTCCAGAGGATCTCTTCCTTGATGACCAAGAGCCTGCAAATGGAGGGTTCCTGTCATTTCTCGGTGGCGCGGCCACCGCTGCTTCAGCCGCAGGTCCTGCAATTGCAGCGCGTGTATAG

Protein sequence

MKRENIKEVDKRSSNLSVATAGAVMVTNVRGSSTARSRSPPPMASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSFARPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRPSDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPEDLFLDDQEPANGGFLSFLGGAATAASAAGPAIAARV

Homology

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BLAST of Carg24492 vs. NCBI nr
Match: KAG7030641.1 (PRA1 family protein B1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 471.1 bits (1211), Expect = 6.2e-129
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MKRENIKEVDKRSSNLSVATAGAVMVTNVRGSSTARSRSPPPMASPPTLPISGHQSATGA 60
           MKRENIKEVDKRSSNLSVATAGAVMVTNVRGSSTARSRSPPPMASPPTLPISGHQSATGA
Sbjct: 1   MKRENIKEVDKRSSNLSVATAGAVMVTNVRGSSTARSRSPPPMASPPTLPISGHQSATGA 60

Query: 61  PSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSFARPLNLSEAYSRIRKNFSY 120
           PSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSFARPLNLSEAYSRIRKNFSY
Sbjct: 61  PSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSFARPLNLSEAYSRIRKNFSY 120

Query: 121 FRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRPSDQPLVIRGRTFSDFETL 180
           FRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRPSDQPLVIRGRTFSDFETL
Sbjct: 121 FRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRPSDQPLVIRGRTFSDFETL 180

Query: 181 VGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPEDLFLDDQEPANGGFLSFLG 240
           VGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPEDLFLDDQEPANGGFLSFLG
Sbjct: 181 VGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPEDLFLDDQEPANGGFLSFLG 240

Query: 241 GAATAASAAGPAIAARV 258
           GAATAASAAGPAIAARV
Sbjct: 241 GAATAASAAGPAIAARV 257

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BLAST of Carg24492 vs. NCBI nr
Match: KAG6599963.1 (PRA1 family protein B1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 397.9 bits (1021), Expect = 6.6e-107
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 43  MASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSFA 102
           MASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSFA
Sbjct: 1   MASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSFA 60

Query: 103 RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP 162
           RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP
Sbjct: 61  RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP 120

Query: 163 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED 222
           SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED
Sbjct: 121 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED 180

Query: 223 LFLDDQEPANGGFLSFLGGAATAASAAGPAIAARV 258
           LFLDDQEPANGGFLSFLGGAATAASAAGPAIAARV
Sbjct: 181 LFLDDQEPANGGFLSFLGGAATAASAAGPAIAARV 215

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BLAST of Carg24492 vs. NCBI nr
Match: XP_022941865.1 (PRA1 family protein B3-like [Cucurbita moschata])

HSP 1 Score: 396.4 bits (1017), Expect = 1.9e-106
Identity = 214/215 (99.53%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 43  MASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSFA 102
           MASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDR SFA
Sbjct: 1   MASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRGSFA 60

Query: 103 RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP 162
           RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP
Sbjct: 61  RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP 120

Query: 163 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED 222
           SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED
Sbjct: 121 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED 180

Query: 223 LFLDDQEPANGGFLSFLGGAATAASAAGPAIAARV 258
           LFLDDQEPANGGFLSFLGGAATAASAAGPAIAARV
Sbjct: 181 LFLDDQEPANGGFLSFLGGAATAASAAGPAIAARV 215

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BLAST of Carg24492 vs. NCBI nr
Match: XP_023513412.1 (PRA1 family protein B3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 394.0 bits (1011), Expect = 9.6e-106
Identity = 213/215 (99.07%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 43  MASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSFA 102
           MASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSS A
Sbjct: 1   MASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSLA 60

Query: 103 RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP 162
           RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP
Sbjct: 61  RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP 120

Query: 163 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED 222
           SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED
Sbjct: 121 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED 180

Query: 223 LFLDDQEPANGGFLSFLGGAATAASAAGPAIAARV 258
           LFLDDQEPANGGFLSFLGGAA+AASAAGPAIAARV
Sbjct: 181 LFLDDQEPANGGFLSFLGGAASAASAAGPAIAARV 215

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BLAST of Carg24492 vs. NCBI nr
Match: XP_022996473.1 (PRA1 family protein B3-like [Cucurbita maxima])

HSP 1 Score: 393.7 bits (1010), Expect = 1.3e-105
Identity = 213/215 (99.07%), Postives = 213/215 (99.07%), Query Frame = 0


Query: 43  MASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSFA 102
           MASPPTLPISGHQSATGAPS PPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSS A
Sbjct: 1   MASPPTLPISGHQSATGAPSHPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSLA 60

Query: 103 RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP 162
           RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP
Sbjct: 61  RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP 120

Query: 163 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED 222
           SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED
Sbjct: 121 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED 180

Query: 223 LFLDDQEPANGGFLSFLGGAATAASAAGPAIAARV 258
           LFLDDQEPANGGFLSFLGGAATAASAAGPAIAARV
Sbjct: 181 LFLDDQEPANGGFLSFLGGAATAASAAGPAIAARV 215

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BLAST of Carg24492 vs. ExPASy Swiss-Prot
Match: Q9FLB6 (PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 4.5e-74
Identity = 150/213 (70.42%), Postives = 177/213 (83.10%), Query Frame = 0


Query: 43  MASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSFA 102
           MA+PPTLPIS H S  G+ SQ P++TPAFR FLSRL+SS+RQ  SQRRPW ELVDRS+ +
Sbjct: 2   MANPPTLPISDH-SGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAIS 61

Query: 103 RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP 162
           RP +L++AYSRIR+N  YF+VNY+T+++LVLA SLLSHPFSLL LL L  AW FLY+FRP
Sbjct: 62  RPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRP 121

Query: 163 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED 222
           SDQPLV+ GRTFSD ETL  L +LT++VVFLTSVGSLL SA MIGF IVC+HGAFR+PED
Sbjct: 122 SDQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPED 181

Query: 223 LFLDDQEPANGGFLSFLGGAATAASAAGPAIAA 256
           LFLDDQEPAN G LSFL GAAT+A+ A  +  A
Sbjct: 182 LFLDDQEPANTGLLSFLSGAATSAAVAAASTPA 213

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BLAST of Carg24492 vs. ExPASy Swiss-Prot
Match: Q9LYN0 (PRA1 family protein B1 OS=Arabidopsis thaliana OX=3702 GN=PRA1B1 PE=1 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.3e-70
Identity = 138/207 (66.67%), Postives = 172/207 (83.09%), Query Frame = 0


Query: 43  MASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSFA 102
           MA+PPTLP++  Q+     SQPPI TPAFR F SRL++S+R G SQRRPW+EL+DRSS A
Sbjct: 1   MATPPTLPVTNQQA---VQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTELIDRSSMA 60

Query: 103 RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP 162
           RP +L++A SRIRKN +YF+VNY+ +++LVLAFSL SHP SLL L+ LL  W FLY+FRP
Sbjct: 61  RPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRP 120

Query: 163 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED 222
           SDQPLV+ GRTFSD ETL+ L + T++VVF+TSVGSLL SA MIG +IVC+HGAF +P+D
Sbjct: 121 SDQPLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDD 180

Query: 223 LFLDDQEPANGGFLSFLGGAATAASAA 250
           LFLD+QEPAN G LSFLGG+AT+A+AA
Sbjct: 181 LFLDEQEPANAGLLSFLGGSATSAAAA 204

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BLAST of Carg24492 vs. ExPASy Swiss-Prot
Match: Q9SIY7 (PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 2.4e-67
Identity = 140/214 (65.42%), Postives = 176/214 (82.24%), Query Frame = 0


Query: 44  ASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSFAR 103
           +SP  LP++  Q+AT   SQPPI + AFR FLSRL+SS+R+  SQRRPW ELVDRSSFAR
Sbjct: 3   SSPAILPVTNQQAAT--QSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFAR 62

Query: 104 PLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRPS 163
           P +L++++SRIRKN +YF+VNY  +++LVLAFSLLSHPFSLL LL+LL +W FLY+FR S
Sbjct: 63  PDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSS 122

Query: 164 DQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPEDL 223
           DQPLV+ GR+FSD ETL+GL + T++VVF+TSVGSLL SA  IG +IVC+HGAFR+P+DL
Sbjct: 123 DQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDL 182

Query: 224 FLDDQEPANGGFLSFLGGAATAASAAGPAIAARV 258
           FLD+QEPAN G LSF+G +A A SAA   +A RV
Sbjct: 183 FLDEQEPANAGLLSFIGNSA-ATSAAASVVAGRV 213

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BLAST of Carg24492 vs. ExPASy Swiss-Prot
Match: O80915 (PRA1 family protein B4 OS=Arabidopsis thaliana OX=3702 GN=PRA1B4 PE=1 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.6e-63
Identity = 131/219 (59.82%), Postives = 173/219 (79.00%), Query Frame = 0


Query: 44  ASPPTLPISGHQSATGA-----PSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDR 103
           ++PP LPIS  Q+   A      SQPPIATPAFR F++++T +V+ G S+RRPW+EL DR
Sbjct: 4   SAPPVLPISNPQTVPSAAPSSVESQPPIATPAFRNFINQITETVKNGLSKRRPWAELADR 63

Query: 104 SSFARPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLY 163
           S+ ++P ++S+A  RIRKN+SYF+VNY+T+ T ++ FSL++HPFSL+ LL LLA+W FLY
Sbjct: 64  SALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASWLFLY 123

Query: 164 IFRPSDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFR 223
           +FRP+DQP+V+ GRTFSD ETL  L + ++ V+FLT VGS+L+SA MIG +++C HGAFR
Sbjct: 124 LFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAHGAFR 183

Query: 224 LPEDLFLDDQEPANGGFLSFLGGAATAASAAGPAIAARV 258
            PEDLFLD+QEPA  GFLSFLGGA  A+SAA   IAARV
Sbjct: 184 APEDLFLDEQEPAATGFLSFLGGA--ASSAAPAVIAARV 220

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BLAST of Carg24492 vs. ExPASy Swiss-Prot
Match: Q9M012 (PRA1 family protein B5 OS=Arabidopsis thaliana OX=3702 GN=PRA1B5 PE=1 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.9e-56
Identity = 123/220 (55.91%), Postives = 163/220 (74.09%), Query Frame = 0


Query: 45  SPPTLPISGHQSATGAPSQPPIAT-------PAFRAFLSRLTSSVRQGFSQRRPWSELVD 104
           +PP LPIS   +AT   +QPPI T       P  RAF++ +T +V  G S+ RPWSEL+D
Sbjct: 5   NPPVLPIS--TTATDTTNQPPIVTAVVESQPPVVRAFVNGVTETVCGGLSRSRPWSELLD 64

Query: 105 RSSFARPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFL 164
           RS+F +P +LSEA +R RKN SYFRVNY+ ++ L+L FSLL+HPFSL+ LL L A+W FL
Sbjct: 65  RSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAASWLFL 124

Query: 165 YIFRPSDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAF 224
           Y+FRPSD+PL++ GR+FS++ETL GL + T+ V+F TSVGS+LISA MIG + +C+HGAF
Sbjct: 125 YLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATICVHGAF 184

Query: 225 RLPEDLFLDDQEPANGGFLSFLG------GAATAASAAGP 252
           R P+DLFLD+Q+ A  GFLSF+G       A +A+SAA P
Sbjct: 185 RAPDDLFLDEQDHAASGFLSFIGVPAIPSVAPSASSAASP 222

[Close]

BLAST of Carg24492 vs. ExPASy TrEMBL
Match: A0A6J1FV06 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111447098 PE=3 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 9.4e-107
Identity = 214/215 (99.53%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 43  MASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSFA 102
           MASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDR SFA
Sbjct: 1   MASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRGSFA 60

Query: 103 RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP 162
           RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP
Sbjct: 61  RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP 120

Query: 163 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED 222
           SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED
Sbjct: 121 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED 180

Query: 223 LFLDDQEPANGGFLSFLGGAATAASAAGPAIAARV 258
           LFLDDQEPANGGFLSFLGGAATAASAAGPAIAARV
Sbjct: 181 LFLDDQEPANGGFLSFLGGAATAASAAGPAIAARV 215

[Close]

BLAST of Carg24492 vs. ExPASy TrEMBL
Match: A0A6J1KAU7 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111491710 PE=3 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 6.1e-106
Identity = 213/215 (99.07%), Postives = 213/215 (99.07%), Query Frame = 0


Query: 43  MASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSFA 102
           MASPPTLPISGHQSATGAPS PPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSS A
Sbjct: 1   MASPPTLPISGHQSATGAPSHPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSLA 60

Query: 103 RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP 162
           RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP
Sbjct: 61  RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP 120

Query: 163 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED 222
           SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED
Sbjct: 121 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED 180

Query: 223 LFLDDQEPANGGFLSFLGGAATAASAAGPAIAARV 258
           LFLDDQEPANGGFLSFLGGAATAASAAGPAIAARV
Sbjct: 181 LFLDDQEPANGGFLSFLGGAATAASAAGPAIAARV 215

[Close]

BLAST of Carg24492 vs. ExPASy TrEMBL
Match: A0A0A0KP82 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_5G218210 PE=3 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 5.0e-100
Identity = 202/215 (93.95%), Postives = 207/215 (96.28%), Query Frame = 0


Query: 43  MASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSFA 102
           MASPPTLPISG QS+TGAPSQPPIATPAFRAFLSRLTSSVRQGFS RRPWSELVDRSS A
Sbjct: 1   MASPPTLPISGPQSSTGAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMA 60

Query: 103 RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP 162
           RP NLSEAYSRIRKNFSYFRVNYITL TLVL FSLLSHPFSLLTLL+LLAAW FLYIFRP
Sbjct: 61  RPDNLSEAYSRIRKNFSYFRVNYITLFTLVLGFSLLSHPFSLLTLLSLLAAWCFLYIFRP 120

Query: 163 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED 222
           SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGF+IVCIHGAFR+PED
Sbjct: 121 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFAIVCIHGAFRVPED 180

Query: 223 LFLDDQEPANGGFLSFLGGAATAASAAGPAIAARV 258
           LFLDDQEP NGGFLSFLGGAA+AASAAGPAIAARV
Sbjct: 181 LFLDDQEPVNGGFLSFLGGAASAASAAGPAIAARV 215

[Close]

BLAST of Carg24492 vs. ExPASy TrEMBL
Match: A0A5D3DQA9 (PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00710 PE=3 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 8.5e-100
Identity = 202/215 (93.95%), Postives = 206/215 (95.81%), Query Frame = 0


Query: 43  MASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSFA 102
           MASPPTLPISG QSATGAPSQPPIATPAFRAFLSRLTSSVRQGFS RRPWSELVDRSS A
Sbjct: 1   MASPPTLPISGPQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMA 60

Query: 103 RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP 162
           RP NLSEAYSRIRKNFSYFRVNYITL  LVL FSLLSHPFSLLTLL+LLAAW FLYIFRP
Sbjct: 61  RPDNLSEAYSRIRKNFSYFRVNYITLFALVLGFSLLSHPFSLLTLLSLLAAWCFLYIFRP 120

Query: 163 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED 222
           SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGF+IVCIHGAFR+PED
Sbjct: 121 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFAIVCIHGAFRVPED 180

Query: 223 LFLDDQEPANGGFLSFLGGAATAASAAGPAIAARV 258
           LFLDDQEP NGGFLSFLGGAA+AASAAGPAIAARV
Sbjct: 181 LFLDDQEPVNGGFLSFLGGAASAASAAGPAIAARV 215

[Close]

BLAST of Carg24492 vs. ExPASy TrEMBL
Match: A0A1S3C4C0 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103496706 PE=3 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 8.5e-100
Identity = 202/215 (93.95%), Postives = 206/215 (95.81%), Query Frame = 0


Query: 43  MASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSFA 102
           MASPPTLPISG QSATGAPSQPPIATPAFRAFLSRLTSSVRQGFS RRPWSELVDRSS A
Sbjct: 1   MASPPTLPISGPQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMA 60

Query: 103 RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP 162
           RP NLSEAYSRIRKNFSYFRVNYITL  LVL FSLLSHPFSLLTLL+LLAAW FLYIFRP
Sbjct: 61  RPDNLSEAYSRIRKNFSYFRVNYITLFALVLGFSLLSHPFSLLTLLSLLAAWCFLYIFRP 120

Query: 163 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED 222
           SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGF+IVCIHGAFR+PED
Sbjct: 121 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFAIVCIHGAFRVPED 180

Query: 223 LFLDDQEPANGGFLSFLGGAATAASAAGPAIAARV 258
           LFLDDQEP NGGFLSFLGGAA+AASAAGPAIAARV
Sbjct: 181 LFLDDQEPVNGGFLSFLGGAASAASAAGPAIAARV 215

[Close]

BLAST of Carg24492 vs. TAIR 10
Match: AT5G05380.1 (prenylated RAB acceptor 1.B3 )

HSP 1 Score: 279.3 bits (713), Expect = 3.2e-75
Identity = 150/213 (70.42%), Postives = 177/213 (83.10%), Query Frame = 0


Query: 43  MASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSFA 102
           MA+PPTLPIS H S  G+ SQ P++TPAFR FLSRL+SS+RQ  SQRRPW ELVDRS+ +
Sbjct: 2   MANPPTLPISDH-SGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAIS 61

Query: 103 RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP 162
           RP +L++AYSRIR+N  YF+VNY+T+++LVLA SLLSHPFSLL LL L  AW FLY+FRP
Sbjct: 62  RPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRP 121

Query: 163 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED 222
           SDQPLV+ GRTFSD ETL  L +LT++VVFLTSVGSLL SA MIGF IVC+HGAFR+PED
Sbjct: 122 SDQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPED 181

Query: 223 LFLDDQEPANGGFLSFLGGAATAASAAGPAIAA 256
           LFLDDQEPAN G LSFL GAAT+A+ A  +  A
Sbjct: 182 LFLDDQEPANTGLLSFLSGAATSAAVAAASTPA 213

[Close]

BLAST of Carg24492 vs. TAIR 10
Match: AT3G56110.1 (prenylated RAB acceptor 1.B1 )

HSP 1 Score: 266.9 bits (681), Expect = 1.6e-71
Identity = 138/207 (66.67%), Postives = 172/207 (83.09%), Query Frame = 0


Query: 43  MASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSFA 102
           MA+PPTLP++  Q+     SQPPI TPAFR F SRL++S+R G SQRRPW+EL+DRSS A
Sbjct: 1   MATPPTLPVTNQQA---VQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTELIDRSSMA 60

Query: 103 RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP 162
           RP +L++A SRIRKN +YF+VNY+ +++LVLAFSL SHP SLL L+ LL  W FLY+FRP
Sbjct: 61  RPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRP 120

Query: 163 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED 222
           SDQPLV+ GRTFSD ETL+ L + T++VVF+TSVGSLL SA MIG +IVC+HGAF +P+D
Sbjct: 121 SDQPLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDD 180

Query: 223 LFLDDQEPANGGFLSFLGGAATAASAA 250
           LFLD+QEPAN G LSFLGG+AT+A+AA
Sbjct: 181 LFLDEQEPANAGLLSFLGGSATSAAAA 204

[Close]

BLAST of Carg24492 vs. TAIR 10
Match: AT3G56110.2 (prenylated RAB acceptor 1.B1 )

HSP 1 Score: 266.9 bits (681), Expect = 1.6e-71
Identity = 138/207 (66.67%), Postives = 172/207 (83.09%), Query Frame = 0


Query: 43  MASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSFA 102
           MA+PPTLP++  Q+     SQPPI TPAFR F SRL++S+R G SQRRPW+EL+DRSS A
Sbjct: 1   MATPPTLPVTNQQA---VQSQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTELIDRSSMA 60

Query: 103 RPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRP 162
           RP +L++A SRIRKN +YF+VNY+ +++LVLAFSL SHP SLL L+ LL  W FLY+FRP
Sbjct: 61  RPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRP 120

Query: 163 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPED 222
           SDQPLV+ GRTFSD ETL+ L + T++VVF+TSVGSLL SA MIG +IVC+HGAF +P+D
Sbjct: 121 SDQPLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDD 180

Query: 223 LFLDDQEPANGGFLSFLGGAATAASAA 250
           LFLD+QEPAN G LSFLGG+AT+A+AA
Sbjct: 181 LFLDEQEPANAGLLSFLGGSATSAAAA 204

[Close]

BLAST of Carg24492 vs. TAIR 10
Match: AT2G40380.1 (prenylated RAB acceptor 1.B2 )

HSP 1 Score: 256.9 bits (655), Expect = 1.7e-68
Identity = 140/214 (65.42%), Postives = 176/214 (82.24%), Query Frame = 0


Query: 44  ASPPTLPISGHQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDRSSFAR 103
           +SP  LP++  Q+AT   SQPPI + AFR FLSRL+SS+R+  SQRRPW ELVDRSSFAR
Sbjct: 3   SSPAILPVTNQQAAT--QSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFAR 62

Query: 104 PLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLYIFRPS 163
           P +L++++SRIRKN +YF+VNY  +++LVLAFSLLSHPFSLL LL+LL +W FLY+FR S
Sbjct: 63  PDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSS 122

Query: 164 DQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFRLPEDL 223
           DQPLV+ GR+FSD ETL+GL + T++VVF+TSVGSLL SA  IG +IVC+HGAFR+P+DL
Sbjct: 123 DQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDL 182

Query: 224 FLDDQEPANGGFLSFLGGAATAASAAGPAIAARV 258
           FLD+QEPAN G LSF+G +A A SAA   +A RV
Sbjct: 183 FLDEQEPANAGLLSFIGNSA-ATSAAASVVAGRV 213

[Close]

BLAST of Carg24492 vs. TAIR 10
Match: AT2G38360.1 (prenylated RAB acceptor 1.B4 )

HSP 1 Score: 244.2 bits (622), Expect = 1.1e-64
Identity = 131/219 (59.82%), Postives = 173/219 (79.00%), Query Frame = 0


Query: 44  ASPPTLPISGHQSATGA-----PSQPPIATPAFRAFLSRLTSSVRQGFSQRRPWSELVDR 103
           ++PP LPIS  Q+   A      SQPPIATPAFR F++++T +V+ G S+RRPW+EL DR
Sbjct: 4   SAPPVLPISNPQTVPSAAPSSVESQPPIATPAFRNFINQITETVKNGLSKRRPWAELADR 63

Query: 104 SSFARPLNLSEAYSRIRKNFSYFRVNYITLLTLVLAFSLLSHPFSLLTLLALLAAWSFLY 163
           S+ ++P ++S+A  RIRKN+SYF+VNY+T+ T ++ FSL++HPFSL+ LL LLA+W FLY
Sbjct: 64  SALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASWLFLY 123

Query: 164 IFRPSDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFSIVCIHGAFR 223
           +FRP+DQP+V+ GRTFSD ETL  L + ++ V+FLT VGS+L+SA MIG +++C HGAFR
Sbjct: 124 LFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAHGAFR 183

Query: 224 LPEDLFLDDQEPANGGFLSFLGGAATAASAAGPAIAARV 258
            PEDLFLD+QEPA  GFLSFLGGA  A+SAA   IAARV
Sbjct: 184 APEDLFLDEQEPAATGFLSFLGGA--ASSAAPAVIAARV 220

The following BLAST results are available for this feature:

BLAST of Carg24492 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030641.1	6.2e-129	100.00	PRA1 family protein B1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6599963.1	6.6e-107	100.00	PRA1 family protein B1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022941865.1	1.9e-106	99.53	PRA1 family protein B3-like [Cucurbita moschata]	[more]
XP_023513412.1	9.6e-106	99.07	PRA1 family protein B3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022996473.1	1.3e-105	99.07	PRA1 family protein B3-like [Cucurbita maxima]	[more]

BLAST of Carg24492 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLB6	4.5e-74	70.42	PRA1 family protein B3 OS=Arabidopsis thaliana OX=3702 GN=PRA1B3 PE=1 SV=1	[more]
Q9LYN0	2.3e-70	66.67	PRA1 family protein B1 OS=Arabidopsis thaliana OX=3702 GN=PRA1B1 PE=1 SV=1	[more]
Q9SIY7	2.4e-67	65.42	PRA1 family protein B2 OS=Arabidopsis thaliana OX=3702 GN=PRA1B2 PE=1 SV=1	[more]
O80915	1.6e-63	59.82	PRA1 family protein B4 OS=Arabidopsis thaliana OX=3702 GN=PRA1B4 PE=1 SV=1	[more]
Q9M012	1.9e-56	55.91	PRA1 family protein B5 OS=Arabidopsis thaliana OX=3702 GN=PRA1B5 PE=1 SV=1	[more]

BLAST of Carg24492 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FV06	9.4e-107	99.53	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111447098 PE=3 SV=1	[more]
A0A6J1KAU7	6.1e-106	99.07	PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111491710 PE=3 SV=1	[more]
A0A0A0KP82	5.0e-100	93.95	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_5G218210 PE=3 SV=1	[more]
A0A5D3DQA9	8.5e-100	93.95	PRA1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G...	[more]
A0A1S3C4C0	8.5e-100	93.95	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103496706 PE=3 SV=1	[more]

BLAST of Carg24492 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05380.1	3.2e-75	70.42	prenylated RAB acceptor 1.B3	[more]
AT3G56110.1	1.6e-71	66.67	prenylated RAB acceptor 1.B1	[more]
AT3G56110.2	1.6e-71	66.67	prenylated RAB acceptor 1.B1	[more]
AT2G40380.1	1.7e-68	65.42	prenylated RAB acceptor 1.B2	[more]
AT2G38360.1	1.1e-64	59.82	prenylated RAB acceptor 1.B4	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 86..227 e-value: 2.6E-44 score: 150.3
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 43..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..63
None	No IPR available	PANTHER	PTHR19317:SF77	PRA1 FAMILY PROTEIN B3	coord: 43..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24492-RA	Carg24492-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane