Carg24464 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg24464
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRING finger and transmembrane domain-containing protein 2-like
LocationCarg_Chr04: 508737 .. 513300 (-)
RNA-Seq ExpressionCarg24464
SyntenyCarg24464
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACCTCGGCTTCCAATTCTGATCCTTATCCCAATTCTTCTTCACCCACAACTTCTCCTACCTCCTCCAGATTTGGGGTCTCGATCCCTTCGCTCAATTTCTTCCGTTCGCCTCTGTCCGTCATTTTGGATTACTCTGGAATTCTTCCCACTAGGGCTGTTCCTCATGAATCGGAACCTATAATCAACGGCTCTGCCACCCCTGATTTGCGGGTTTATTCTCAAAATCAGAATCACTTGATGACCACCACTTCTCCTTCTTCTTCTTCTTCTTCTAGTACTAGTCCCACCTCCTCCTCCTCCGGTAATACCAGCCCCTCTGGGGAGGTTTCGATTAGGATTATTGGGTCTGGTGAGCAAGATCCTTCTCCGGCTCTGGTTGGACAAGCTGGCTATGAGCAAAATGGTGGACTTCCTGTTTCTGGGGATCAGCCGGAATCCCCTGATGAGGAACGAGTTCCTTTGGTGTCCACTGCTTCTTCGTCTATTCAATCTGGAAGCAGTCGTGTTTCAGAATCTGGAAATGGCGTGGAAGAGAGTGTTAATAGAGATTCGTCTTATCAGAGATACGATATCCAGCAGGTTGCCAGGTGGATTGAACAGATTCTTCCTTTCTCTTTGCTACTGCTGATAGTCTTTATCCGTCAGCATTTGGAAGGTGCTCCCTTTTGTCCTCTCTTTTGTTGGACCGATTATAGTTTTCGATTTTCATTGCCCTTTGCACTTGGCACCACTTTGCCGTATTGTTCATTTTCGTTATCGAATTTCATATAGTGCTGGTAGTAACTAGTCCTTGTTAAGATATAATTAAGTGGGAATGCTGGCCATTGTTTACTCAGGACTTCCGTTGTATCTATTAAAATTTCACTCTCGTTAGTTCTTATACCTTTTAGATGACTTACAGCGTGATTATAGAGGATAATGTTTGATTTGAATACTGGTGTGGTGTGGTAAATTGCCCCGGATGTTTTTTTTTAACGTACTTGAGTACTGAAATTGCATCGCTGTAGGTGTAAAAGCTACTGTAGTATATTGTAGGGTTTCTTGCAAGGCGGTTGTTGTAAGATGTAGTGATAGAATCATCCAAGAATTTGGAGACCAGAGTTTTTTTAAAGCGTTGGAACTATCTTACTATCAAATGCATATAATTTATTTTCAATGAAGAAAAATAACTGGATTAACTTTGTTGACAATTGGGTTCTGCTATTAACACATGTTTTCATGTATTTAAAAATAAATATGCGTTGAAAAGGCAGCTCACGGGAGTGGGGAGGAAGGTGTTGAGAAAGAAGTAGAGGAATACTGTGGAAACAGTTATGTTAGCATCAGATCATTTGGTTTGGAGATGACACTTTGCCATAAATCTTTGGAACATACTTTTGGACACGTTTGTTTGGTAGTCGACATATACATCAATTATCTTCCACTACCTAACCTAATAAGGGAGTTGCAGTACACTGTTAGGTGTAATCACAAAGACAAGTAGTGATCATCTTGTAATCTTCTCCCTTTTACTCTCTTGCTGTAACATTCTTCTAATTGGTGAGAAATTATTTCTTTGATATTTCCAGGTTTTTTCATCACAATTTGTATATCAGCTGTTATGTATAAGTCGAACGATATTGTCAAGAAACAGACTGCTCTAAAGGTGGTGTAAACCTAAACCCAGACTTATCTTATCTATTAGTACCTTATTTCTTTTTCAACTTCACTGAGAATCCACTTGCAAGAAAATACACTGAAGAATTTACTCTCTTTTTCAGGGGGAGAGGAAAATTTCTGTCCTTGCTGGGACATCTATTGCATTTTTGGTTCATGTTATTGGAATTTACTGGTGGTGCCATAGTGATGATCTTCTATACCCGTTAGTCATGCTTCCACCAAAGACAGTACCACCATTTTGGCATGCCTTGTTCATAATCTTGGTTAACGGTACAGATTTTCCCTTGCTTTGGCTTATTAAGTTTCTGTAGATAGAATGATTGAATTAACATATGGAATGGAGCTTCAAAAAATGTATGCAGAAAATTCTCAAGTATCACAGCGGGATTTCTAATTAGTTAGCTTGAATGGTGATATAACAAGGGCATAAATATGGTTTATTATCTTTATGTTATCTATATGGATCTTGCAAACATAGTTTTTAAGACAGGATTCAGGATAATTGCCAAAAAGTGAAAGAATGACATTGTGGTTTTTTCTTTTTCTTTTATTATTATTATTTTTTTTAATGGTTCAACCTTCCTCTTATTCCAACTTCTTTGTTGTATTTCTCTCACAATTTTCTGTACAATTTTTCATACATTTGATTTTAATGTTCTCATTCTTTGATTTTGGACTCTATTGTGTTGCCATGCCAGATACGATGGCGAGGCAGGTTGCAATGGCTCTCAAATGTCTTCTTCTTATTTACTACAAGAATGGCAGAGGCCATAATTTTCGCCGGCAGGTATTATGAGATCTCAAATTTAGCTTAATCATATGTTTTGTGTTTATCTTGTATTAACCATTAATATTATTGAAATGTCTGACAATTACTTTGTTTTAGTTTTTTGATTGTTTATAATTCATGTTTCAGGGTCAAATTTTAACTCTCATGGAGTACACTCTTCTGTTGTATCGTGCATTATTACCGACACCTGTATGGTACCGGTTCTTCTTGAACAAAGATCAAGGAAGCCTTTTTTCATCACTGACAACAGGATTGTATTTAACTTTCAAGCTAACGTCTGTTGTTGAGAAGGTATGGTTTAAAACATGAATATTCGTACCTTAATAAGCACTCAAAAATTTAATATTATGTCATAGTTCGTGGAAACCAACCTTGTTCACGTACTATCTATTTTGTTATTTTCTCTTTAGATTCAATCATTCGTGGCTGCATTTAAGGCTCTATCACAAAAAGAAGTCCATTATGGATCATATGCCACATCAGAACAGGCAAGTATATACATACCAATCTATTGTAGTCTCTTTTGAAATTTACCATTTTAAAACAGCTTTGTGTTTATCCTTGCATATAACTTTAAGCATCTTCCCTCAAATAACGAAATAACGTAAATATTTGTGGAACCCCTTAAGATGATTGAATGTCTCCTTCTTTAATGCTTTCTTAATGTTACAAGTCATTCCCTCTATAATTCATGTTAACGGGATTCCCTTGTTACATTCTCATGAATATGTGATAGTATTACTAGACTACAGGATATGGTCGGAGAAGTGACCTAGATTTTCTCTTAGATCAGATAAACCAATGTGCCACTATCTTTCATTGGTATGGCGACTTAACTTTTGTACCTTTTGATGTTACATGATTGACTCTTCTATATGTAACATTTTTTTTCTTGCTTTCTTTCTCTCTTTCTTTATTTGTTACTTCCCCTTTATAATTCTGGCTAATTGGAGTAATTCGTTTCAAGTACCTTTTGGTCTTCATTTGGTTGGGTATTGTTCTTAATTTTGGAATTTATTTGTAAGCGAAATTTTAGTTTTTATGTTAAAAAACTGCATTCCAATGAAGGTTTTAGGGTACAAGTAAAATTTGCTCTTTTCTTTTATTTTATGTAGTTACTTGTATCAGGCTTCCTTATACTTTATTTTACAGGTAAGTGCTGCGGGAGACCTCTGTGCTATTTGCCAGGAGAAGATGAATGCTCCAATCCTGTTACGCTGTAAGCACATCTTCTGTGAAGATTGTGTTTCTGAATGGTCAGTATGATGACTTCACATCTCTTGTGTTTTCTGAATACTACCAACATTGCATTACTATATTCATATCAGACCTCCATAGGACCAATATATAGATTATAACAGGGAGACAAGCATTCTAATTTGAACTCTTAGGTACTATAGTAATTATCTACCTTGTTATGAGCCAAAAAGTCATGCTCTTGGCTGAGAAAAACTGGATTTGTTCATCAGGTATCGAGGAATTAGTTCAGTTTATTTTTAAATTCTTTTACTGGATGGCCTATCATATAAAGTAGAGGTATATAATTTTTAGAGTTTTTTTTTGCAAATCCAAACACACCACATTATCATTCCATCCTCATATGTATGTTATGAATCCTTGGGACTTAACCATGCTGCAGTCATTAATATTAGAAATGATCTCTATATGGTCATATCATTCTTATTATTAGTGACAGGGGATTGTCTGTGTCTGACTAGTATGGCTACGGCATATATTTGACTGAGACTATGCTGTGTTGCCCACACTTTTTTTCATTTACTCCTGCGCACGCACACGACAATGGACCTACTCACCTACTCGTGCGCACAGAGATGAAGGAACCAAAAGAAAAAAAAAATGAAGAAAGGACAGAACCCTTGAATCTTGATTAATAGTGGCACGATTCTTTCGACTGGGCATAAGTCTAGTGCTTAGGAATTAGTTGTAGCTCTAACAAATGTCATTGCATTTCCATTTACTGGTTCGAGTACTTGTGTTTTCAGGTTTGAAAGAGAAAGAACTTGCCCTCTCTGCCGGGCGCTGGTAAAGCCAGCAGAACTCCGAACATTTGGCGACGGGTCGACCAGCTTACTCTTCCAGTTGTTTTAG

mRNA sequence

ATGGAGACCTCGGCTTCCAATTCTGATCCTTATCCCAATTCTTCTTCACCCACAACTTCTCCTACCTCCTCCAGATTTGGGGTCTCGATCCCTTCGCTCAATTTCTTCCGTTCGCCTCTGTCCGTCATTTTGGATTACTCTGGAATTCTTCCCACTAGGGCTGTTCCTCATGAATCGGAACCTATAATCAACGGCTCTGCCACCCCTGATTTGCGGGTTTATTCTCAAAATCAGAATCACTTGATGACCACCACTTCTCCTTCTTCTTCTTCTTCTTCTAGTACTAGTCCCACCTCCTCCTCCTCCGGTAATACCAGCCCCTCTGGGGAGGTTTCGATTAGGATTATTGGGTCTGGTGAGCAAGATCCTTCTCCGGCTCTGGTTGGACAAGCTGGCTATGAGCAAAATGGTGGACTTCCTGTTTCTGGGGATCAGCCGGAATCCCCTGATGAGGAACGAGTTCCTTTGGTGTCCACTGCTTCTTCGTCTATTCAATCTGGAAGCAGTCGTGTTTCAGAATCTGGAAATGGCGTGGAAGAGAGTGTTAATAGAGATTCGTCTTATCAGAGATACGATATCCAGCAGGTTGCCAGGTGGATTGAACAGATTCTTCCTTTCTCTTTGCTACTGCTGATAGTCTTTATCCGTCAGCATTTGGAAGGTTTTTTCATCACAATTTGTATATCAGCTGTTATGTATAAGTCGAACGATATTGTCAAGAAACAGACTGCTCTAAAGGGGGAGAGGAAAATTTCTGTCCTTGCTGGGACATCTATTGCATTTTTGGTTCATGTTATTGGAATTTACTGGTGGTGCCATAGTGATGATCTTCTATACCCGTTAGTCATGCTTCCACCAAAGACAGTACCACCATTTTGGCATGCCTTGTTCATAATCTTGGTTAACGATACGATGGCGAGGCAGGTTGCAATGGCTCTCAAATGTCTTCTTCTTATTTACTACAAGAATGGCAGAGGCCATAATTTTCGCCGGCAGGGTCAAATTTTAACTCTCATGGAGTACACTCTTCTGTTGTATCGTGCATTATTACCGACACCTGTATGGTACCGGTTCTTCTTGAACAAAGATCAAGGAAGCCTTTTTTCATCACTGACAACAGGATTGTATTTAACTTTCAAGCTAACGTCTGTTGTTGAGAAGGTAAGTGCTGCGGGAGACCTCTGTGCTATTTGCCAGGAGAAGATGAATGCTCCAATCCTGTTACGCTGTAAGCACATCTTCTGTGAAGATTGTGTTTCTGAATGGTTTGAAAGAGAAAGAACTTGCCCTCTCTGCCGGGCGCTGGTAAAGCCAGCAGAACTCCGAACATTTGGCGACGGGTCGACCAGCTTACTCTTCCAGTTGTTTTAG

Coding sequence (CDS)

ATGGAGACCTCGGCTTCCAATTCTGATCCTTATCCCAATTCTTCTTCACCCACAACTTCTCCTACCTCCTCCAGATTTGGGGTCTCGATCCCTTCGCTCAATTTCTTCCGTTCGCCTCTGTCCGTCATTTTGGATTACTCTGGAATTCTTCCCACTAGGGCTGTTCCTCATGAATCGGAACCTATAATCAACGGCTCTGCCACCCCTGATTTGCGGGTTTATTCTCAAAATCAGAATCACTTGATGACCACCACTTCTCCTTCTTCTTCTTCTTCTTCTAGTACTAGTCCCACCTCCTCCTCCTCCGGTAATACCAGCCCCTCTGGGGAGGTTTCGATTAGGATTATTGGGTCTGGTGAGCAAGATCCTTCTCCGGCTCTGGTTGGACAAGCTGGCTATGAGCAAAATGGTGGACTTCCTGTTTCTGGGGATCAGCCGGAATCCCCTGATGAGGAACGAGTTCCTTTGGTGTCCACTGCTTCTTCGTCTATTCAATCTGGAAGCAGTCGTGTTTCAGAATCTGGAAATGGCGTGGAAGAGAGTGTTAATAGAGATTCGTCTTATCAGAGATACGATATCCAGCAGGTTGCCAGGTGGATTGAACAGATTCTTCCTTTCTCTTTGCTACTGCTGATAGTCTTTATCCGTCAGCATTTGGAAGGTTTTTTCATCACAATTTGTATATCAGCTGTTATGTATAAGTCGAACGATATTGTCAAGAAACAGACTGCTCTAAAGGGGGAGAGGAAAATTTCTGTCCTTGCTGGGACATCTATTGCATTTTTGGTTCATGTTATTGGAATTTACTGGTGGTGCCATAGTGATGATCTTCTATACCCGTTAGTCATGCTTCCACCAAAGACAGTACCACCATTTTGGCATGCCTTGTTCATAATCTTGGTTAACGATACGATGGCGAGGCAGGTTGCAATGGCTCTCAAATGTCTTCTTCTTATTTACTACAAGAATGGCAGAGGCCATAATTTTCGCCGGCAGGGTCAAATTTTAACTCTCATGGAGTACACTCTTCTGTTGTATCGTGCATTATTACCGACACCTGTATGGTACCGGTTCTTCTTGAACAAAGATCAAGGAAGCCTTTTTTCATCACTGACAACAGGATTGTATTTAACTTTCAAGCTAACGTCTGTTGTTGAGAAGGTAAGTGCTGCGGGAGACCTCTGTGCTATTTGCCAGGAGAAGATGAATGCTCCAATCCTGTTACGCTGTAAGCACATCTTCTGTGAAGATTGTGTTTCTGAATGGTTTGAAAGAGAAAGAACTTGCCCTCTCTGCCGGGCGCTGGTAAAGCCAGCAGAACTCCGAACATTTGGCGACGGGTCGACCAGCTTACTCTTCCAGTTGTTTTAG

Protein sequence

METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESEPIINGSATPDLRVYSQNQNHLMTTTSPSSSSSSSTSPTSSSSGNTSPSGEVSIRIIGSGEQDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFIILVNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEKVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF
Homology
[Close]
BLAST of Carg24464 vs. NCBI nr
Match: KAG7030613.1 (RING finger and transmembrane domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 879.8 bits (2272), Expect = 1.0e-251
Identity = 456/456 (100.00%), Postives = 456/456 (100.00%), Query Frame = 0 

Query: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60
           METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE
Sbjct: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60

Query: 61  PIINGSATPDLRVYSQNQNHLMTTTSPSSSSSSSTSPTSSSSGNTSPSGEVSIRIIGSGE 120
           PIINGSATPDLRVYSQNQNHLMTTTSPSSSSSSSTSPTSSSSGNTSPSGEVSIRIIGSGE
Sbjct: 61  PIINGSATPDLRVYSQNQNHLMTTTSPSSSSSSSTSPTSSSSGNTSPSGEVSIRIIGSGE 120

Query: 121 QDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVEE 180
           QDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVEE
Sbjct: 121 QDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVEE 180

Query: 181 SVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVK 240
           SVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVK
Sbjct: 181 SVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVK 240

Query: 241 KQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFIIL 300
           KQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFIIL
Sbjct: 241 KQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFIIL 300

Query: 301 VNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFFL 360
           VNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFFL
Sbjct: 301 VNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFFL 360

Query: 361 NKDQGSLFSSLTTGLYLTFKLTSVVEKVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVS 420
           NKDQGSLFSSLTTGLYLTFKLTSVVEKVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVS
Sbjct: 361 NKDQGSLFSSLTTGLYLTFKLTSVVEKVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVS 420

Query: 421 EWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF 457
           EWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF
Sbjct: 421 EWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF 456

[Close]
BLAST of Carg24464 vs. NCBI nr
Match: KAG6599935.1 (RING finger and transmembrane domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 865.5 bits (2235), Expect = 2.0e-247
Identity = 456/482 (94.61%), Postives = 456/482 (94.61%), Query Frame = 0 

Query: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60
           METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE
Sbjct: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60

Query: 61  PIINGSATPDLRVYSQNQNHLMTTTSPSSSSSSSTSPTSSSSGNTSPSGEVSIRIIGSGE 120
           PIINGSATPDLRVYSQNQNHLMTTTSPSSSSSSSTSPTSSSSGNTSPSGEVSIRIIGSGE
Sbjct: 61  PIINGSATPDLRVYSQNQNHLMTTTSPSSSSSSSTSPTSSSSGNTSPSGEVSIRIIGSGE 120

Query: 121 QDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVEE 180
           QDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVEE
Sbjct: 121 QDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVEE 180

Query: 181 SVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVK 240
           SVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVK
Sbjct: 181 SVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVK 240

Query: 241 KQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFIIL 300
           KQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFIIL
Sbjct: 241 KQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFIIL 300

Query: 301 VNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFFL 360
           VNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFFL
Sbjct: 301 VNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFFL 360

Query: 361 NKDQGSLFSSLTTGLYLTFKLTSVVEK--------------------------VSAAGDL 420
           NKDQGSLFSSLTTGLYLTFKLTSVVEK                          VSAAGDL
Sbjct: 361 NKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQVSAAGDL 420

Query: 421 CAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQ 457
           CAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQ
Sbjct: 421 CAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQ 480

[Close]
BLAST of Carg24464 vs. NCBI nr
Match: XP_022942268.1 (E3 ubiquitin-protein ligase RNFT1-like [Cucurbita moschata])

HSP 1 Score: 858.6 bits (2217), Expect = 2.4e-245
Identity = 455/482 (94.40%), Postives = 455/482 (94.40%), Query Frame = 0 

Query: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60
           METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE
Sbjct: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60

Query: 61  PIINGSATPDLRVYSQNQNHLMTTTSPSSSSSSSTSPTSSSSGNTSPSGEVSIRIIGSGE 120
           PIINGSATPDLRVYSQNQNHLMTTTS SSSSSSSTSPTSSSSGNTSPSGEVSIRIIGSGE
Sbjct: 61  PIINGSATPDLRVYSQNQNHLMTTTS-SSSSSSSTSPTSSSSGNTSPSGEVSIRIIGSGE 120

Query: 121 QDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVEE 180
           QDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVEE
Sbjct: 121 QDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVEE 180

Query: 181 SVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVK 240
           SVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVK
Sbjct: 181 SVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVK 240

Query: 241 KQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFIIL 300
           KQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFIIL
Sbjct: 241 KQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFIIL 300

Query: 301 VNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFFL 360
           VNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFFL
Sbjct: 301 VNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFFL 360

Query: 361 NKDQGSLFSSLTTGLYLTFKLTSVVEK--------------------------VSAAGDL 420
           NKDQGSLFSSLTTGLYLTFKLTSVVEK                          VSAAGDL
Sbjct: 361 NKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQVSAAGDL 420

Query: 421 CAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQ 457
           CAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQ
Sbjct: 421 CAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQ 480

[Close]
BLAST of Carg24464 vs. NCBI nr
Match: XP_023536798.1 (E3 ubiquitin-protein ligase RNFT1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 849.7 bits (2194), Expect = 1.1e-242
Identity = 451/482 (93.57%), Postives = 452/482 (93.78%), Query Frame = 0 

Query: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60
           METSASNSDPY NSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE
Sbjct: 1   METSASNSDPYSNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60

Query: 61  PIINGSATPDLRVYSQNQNHLMTTTSPSSSSSSSTSPTSSSSGNTSPSGEVSIRIIGSGE 120
           PIINGSATPDLRVYSQNQNHLMTTTS SSSSSSS SPTSSSSGNTSPSGEVSIRIIGSGE
Sbjct: 61  PIINGSATPDLRVYSQNQNHLMTTTS-SSSSSSSNSPTSSSSGNTSPSGEVSIRIIGSGE 120

Query: 121 QDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVEE 180
           QDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVEE
Sbjct: 121 QDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVEE 180

Query: 181 SVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVK 240
           SVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVK
Sbjct: 181 SVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVK 240

Query: 241 KQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFIIL 300
           KQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLL+PLVMLPPKTVPPFWHALFIIL
Sbjct: 241 KQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLHPLVMLPPKTVPPFWHALFIIL 300

Query: 301 VNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFFL 360
           VNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLP PVWYRFFL
Sbjct: 301 VNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPAPVWYRFFL 360

Query: 361 NKDQGSLFSSLTTGLYLTFKLTSVVEK--------------------------VSAAGDL 420
           NKDQGSLFSSLTTGLYLTFKLTSVVEK                          VSAAGDL
Sbjct: 361 NKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQVSAAGDL 420

Query: 421 CAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQ 457
           CAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQ
Sbjct: 421 CAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQ 480

[Close]
BLAST of Carg24464 vs. NCBI nr
Match: XP_022995594.1 (E3 ubiquitin-protein ligase RNFT1-like [Cucurbita maxima])

HSP 1 Score: 849.4 bits (2193), Expect = 1.5e-242
Identity = 452/483 (93.58%), Postives = 453/483 (93.79%), Query Frame = 0 

Query: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60
           METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE
Sbjct: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60

Query: 61  PIINGSATPDLRVYSQNQNHLMTTTSPSSSSSSSTSPT-SSSSGNTSPSGEVSIRIIGSG 120
           PIINGSATPDLRVYSQNQNHLMTTT+ SSSSSSSTSPT SSSSGNTSPSGEVSIRIIGSG
Sbjct: 61  PIINGSATPDLRVYSQNQNHLMTTTT-SSSSSSSTSPTSSSSSGNTSPSGEVSIRIIGSG 120

Query: 121 EQDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVE 180
           EQDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVE
Sbjct: 121 EQDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVE 180

Query: 181 ESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIV 240
           ESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIV
Sbjct: 181 ESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIV 240

Query: 241 KKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFII 300
           KKQTALKGERKISVLAGTSIAFLVHVIGIYWWCH DDLLYPLVMLPPKTVPPFWHALFII
Sbjct: 241 KKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHRDDLLYPLVMLPPKTVPPFWHALFII 300

Query: 301 LVNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFF 360
           LVNDTM RQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFF
Sbjct: 301 LVNDTMVRQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFF 360

Query: 361 LNKDQGSLFSSLTTGLYLTFKLTSVVEK--------------------------VSAAGD 420
           LNKDQGSLFSSLTTGLYLTFKLTSVVEK                          VSAAGD
Sbjct: 361 LNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQVSAAGD 420

Query: 421 LCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLF 457
           LCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLF
Sbjct: 421 LCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLF 480

[Close]
BLAST of Carg24464 vs. ExPASy Swiss-Prot
Match: Q96EX2 (RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens OX=9606 GN=RNFT2 PE=2 SV=2)

HSP 1 Score: 130.6 bits (327), Expect = 4.6e-29
Identity = 84/294 (28.57%), Postives = 152/294 (51.70%), Query Frame = 0 

Query: 192 DIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVKKQTALKGERKI 251
           +++ V  W+++ LPF L+LL     QH  G  + I +++    +N  +++Q +LK +R +
Sbjct: 155 ELKAVICWLQKGLPFILILLAKLCFQHKLGIAVCIGMASTFAYANSTLREQVSLKEKRSV 214

Query: 252 SVLAGTSIAFLV-HVIGIYWWCHSDDLLYPLVMLPPK-TVPPFWHALFIILVNDTMARQV 311
            V+    +AFL  + + + +   S  L   L+ L P   +  F+  L+I+ + D + + +
Sbjct: 215 LVILWI-LAFLAGNTLYVLYTFSSQQLYNSLIFLKPNLEMLDFFDLLWIVGIADFVLKYI 274

Query: 312 AMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFFLNKDQGSLF- 371
            +ALKCL++   K       + +G+   ++E    L+R+L+P  +WY++ +  D  + + 
Sbjct: 275 TIALKCLIVALPKIILA--VKSKGKFYLVIEELSQLFRSLVPIQLWYKYIMGDDSSNSYF 334

Query: 372 -SSLTTGLYLTFKLTSVVEKV-------------------------SAAGDLCAICQEKM 431
              +   LY   K   +  +V                         + AGD+CAICQ + 
Sbjct: 335 LGGVLIVLYSLCKSFDICGRVGGVRKALKLLCTSQNYGVRATGQQCTEAGDICAICQAEF 394

Query: 432 NAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF 457
             P++L C+H+FCE+C+  W +RERTCPLCR+ V    LR + DG+TS  FQ++
Sbjct: 395 REPLILLCQHVFCEECLCLWLDRERTCPLCRS-VAVDTLRCWKDGATSAHFQVY 444

[Close]
BLAST of Carg24464 vs. ExPASy Swiss-Prot
Match: Q6NZ21 (E3 ubiquitin-protein ligase RNFT1 OS=Danio rerio OX=7955 GN=rnft1 PE=2 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 1.7e-28
Identity = 85/322 (26.40%), Postives = 153/322 (47.52%), Query Frame = 0 

Query: 167 GSSRVSESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITI 226
           G S   ES +G  +  + +SS    +++ + RW+++ LPF ++L    + QH  G  + +
Sbjct: 102 GHSHEHESDSGESDLESGESSSSISELRYLLRWLKKSLPFIVILCAKLVIQHALGLAVAV 161

Query: 227 CISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLYPLVMLPP 286
            +       N  ++ Q  L  +R+ ++     + FL     + ++      LY  +    
Sbjct: 162 GLFTTFMYVNKSIQTQVFLH-DRRTNLHCAWLLLFLTSSSLLVFYTFHTQSLYRCLFFAN 221

Query: 287 KTVP--PFWHALFIILVNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLL 346
            T+    FW  L+ + V + + + + M  KCL+L+         +RR+GQ   L+E    
Sbjct: 222 ATIDYHNFWEVLWSVGVTNFILKFIFMGFKCLILLV--PCPLMTYRRRGQWYMLIEEVGQ 281

Query: 347 LYRALLPTPVWYRFFLNKDQGSLFSSLTTG-----LYLTFKLTSVV-------------- 406
           LY+ + P P+W+R+ ++ D+      LT G     LYL  KL ++               
Sbjct: 282 LYQVIAPVPLWFRYLVSYDEMDTSVGLTLGILLALLYLIMKLLALYGLSGSLQKTLRTFF 341

Query: 407 -----------EKVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRA 457
                       ++  AGD+C ICQ     P +L C+HIFCE+C+++W  +ERTCPLCR 
Sbjct: 342 SPEVNGAPASPAQIREAGDICPICQADFKQPRVLVCQHIFCEECIAQWLNQERTCPLCRT 401

[Close]
BLAST of Carg24464 vs. ExPASy Swiss-Prot
Match: Q5RAG4 (RING finger and transmembrane domain-containing protein 2 OS=Pongo abelii OX=9601 GN=RNFT2 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 8.7e-28
Identity = 83/294 (28.23%), Postives = 150/294 (51.02%), Query Frame = 0 

Query: 192 DIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVKKQTALKGERKI 251
           +++ V  W+++ LPF L+LL     QH  G  + I +++    +N  +++Q +LK +R +
Sbjct: 155 ELKAVICWLQKGLPFILILLAKLCFQHKLGIAVCIGMASTFAYANSTLREQVSLKEKRSV 214

Query: 252 SVLAGTSIAFLV-HVIGIYWWCHSDDLLYPLVMLPPK-TVPPFWHALFIILVNDTMARQV 311
            V+    +AFL  + + + +   S  L   L+ L P      F+  L+I+ + D + + +
Sbjct: 215 LVILWI-LAFLAGNTLYVLYTFSSQQLYNSLIFLKPNLETLDFFDLLWIVGIADFVLKYI 274

Query: 312 AMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFFLNKDQGSLF- 371
            +ALKCL++   K       + +G+   ++E    L+R+L+P  +WY++ +  D  + + 
Sbjct: 275 TIALKCLIVALPKIILA--VKSKGKFYLVIEELSQLFRSLVPIQLWYKYIMGDDSSNSYF 334

Query: 372 -SSLTTGLYLTFKLTSVVEKV-------------------------SAAGDLCAICQEKM 431
              +   LY   K   +  +V                         + AGD+CAICQ + 
Sbjct: 335 LGGVLIVLYSLCKSFDICGRVGGVRKALKLLCTSQNYGVRATGQQCTEAGDICAICQAEF 394

Query: 432 NAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQLF 457
             P++L C+H+FCE+C+  W +RERTCPL R+ V    LR + DG+TS  FQ++
Sbjct: 395 REPLILLCQHVFCEECLCLWLDRERTCPLSRS-VAVDTLRCWKDGATSAHFQVY 444

[Close]
BLAST of Carg24464 vs. ExPASy Swiss-Prot
Match: Q3UF64 (RING finger and transmembrane domain-containing protein 2 OS=Mus musculus OX=10090 GN=Rnft2 PE=2 SV=2)

HSP 1 Score: 121.3 bits (303), Expect = 2.8e-26
Identity = 89/319 (27.90%), Postives = 159/319 (49.84%), Query Frame = 0 

Query: 167 GSSRVSESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITI 226
           G      S  GV+E     +     +++ V  W+++ LPF L+LL     QH  G  + I
Sbjct: 132 GGDHRGHSEEGVDEQPGTPAP-ALSELKAVISWLQKGLPFILILLAKLCFQHKLGIAVCI 191

Query: 227 CISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLV-HVIGIYWWCHSDDLLYPLVMLP 286
            +++    +N  +++Q +LK +R + V+    +AFL  + + + +   S  L   L+ L 
Sbjct: 192 GMASTFAYANSTLREQVSLKEKRSVLVILWI-LAFLAGNTMYVLYTFSSQQLYSSLIFLK 251

Query: 287 PK-TVPPFWHALFIILVNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLL 346
           P      F+  L+I+ + D + + + +ALKCL++   K       + +G+   ++E    
Sbjct: 252 PNLETLDFFDLLWIVGIADFVLKYITIALKCLIVALPKIILA--VKSKGKFYLVIEELSQ 311

Query: 347 LYRALLPTPVWYRFFLNKDQGS----------LFSSLTT--------GLYLTFKL----- 406
           L+R+L+P  +WY++ +  D  +          L+S   +        GL    KL     
Sbjct: 312 LFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGRVGGLRKALKLLCTSQ 371

Query: 407 ----TSVVEKVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVK 457
                +  ++ + AG +CAICQ +   P++L C+H+FCE+C+  W +RERTCPLCR+ V 
Sbjct: 372 NYGVRATGQQCTEAGAVCAICQAEFRDPMILLCQHVFCEECLCLWLDRERTCPLCRS-VA 431

[Close]
BLAST of Carg24464 vs. ExPASy Swiss-Prot
Match: Q5M7Z0 (E3 ubiquitin-protein ligase RNFT1 OS=Homo sapiens OX=9606 GN=RNFT1 PE=1 SV=2)

HSP 1 Score: 115.5 bits (288), Expect = 1.5e-24
Identity = 118/449 (26.28%), Postives = 192/449 (42.76%), Query Frame = 0 

Query: 51  PTRAVPHE----SEPIINGSATPDLRVYSQNQNHLMTTTSPSSSSSSST----SPTSSSS 110
           P  A  HE     E   +GS    LR    N++ L +     SS  +ST        +  
Sbjct: 11  PPSASGHERRQRPEAKTSGSEKKYLRAMQANRSQLHSPPGTGSSEDASTPQCVHTRLTGE 70

Query: 111 GNTSPSGEVSIRIIGSGE---QDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVST 170
           G+   SG+V I+I    +   ++ S   +    +    G   S  +  S  E R+    T
Sbjct: 71  GSCPHSGDVHIQINSIPKECAENASSRNIRSGVHSCAHGCVHSRLRGHSHSEARL-TDDT 130

Query: 171 ASSSIQSGSSRVSESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHL 230
           A+ S   GSS  SE                    + + +W+++ LP+ L+L +  + QH+
Sbjct: 131 AAESGDHGSSSFSE-------------------FRYLFKWLQKSLPYILILSVKLVMQHI 190

Query: 231 EGFFITICISAVMYKSNDIVKKQTALKGERKISVLAGTSIAFLV-HVIGIYWWCHSDDLL 290
            G  + I +      +N  +  Q  L+ ER   +     + FL    + +Y+  HS  L 
Sbjct: 191 TGISLGIGLLTTFMYANKSIVNQVFLR-ERSSKIQCAWLLVFLAGSSVLLYYTFHSQSLY 250

Query: 291 YPLVMLPPKTVP-PFWHALFIILVNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILT 350
           Y L+ L P      FW   +I+ + D + +   M LKCL+L+         F+ +G    
Sbjct: 251 YSLIFLNPTLDHLSFWEVFWIVGITDFILKFFFMGLKCLILLV--PSFIMPFKSKGYWYM 310

Query: 351 LMEYTLLLYRALLPTPVWYRFFLNKDQGSLFSSLTTG-----LYLTFKL----------- 410
           L+E     YR  +P PVW+R+ ++  +    +  + G     LYL  KL           
Sbjct: 311 LLEELCQYYRTFVPIPVWFRYLISYGEFGNVTRWSLGILLALLYLILKLLEFFGHLRTFR 370

Query: 411 --------------TSVVEKVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERER 457
                          +   + S   D+C+ICQ +   PILL C+HIFCE+C++ WF RE+
Sbjct: 371 QVLRIFFTQPSYGVAASKRQCSDVDDICSICQAEFQKPILLICQHIFCEECMTLWFNREK 430

[Close]
BLAST of Carg24464 vs. ExPASy TrEMBL
Match: A0A6J1FUD5 (E3 ubiquitin-protein ligase RNFT1-like OS=Cucurbita moschata OX=3662 GN=LOC111447364 PE=4 SV=1)

HSP 1 Score: 858.6 bits (2217), Expect = 1.2e-245
Identity = 455/482 (94.40%), Postives = 455/482 (94.40%), Query Frame = 0 

Query: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60
           METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE
Sbjct: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60

Query: 61  PIINGSATPDLRVYSQNQNHLMTTTSPSSSSSSSTSPTSSSSGNTSPSGEVSIRIIGSGE 120
           PIINGSATPDLRVYSQNQNHLMTTTS SSSSSSSTSPTSSSSGNTSPSGEVSIRIIGSGE
Sbjct: 61  PIINGSATPDLRVYSQNQNHLMTTTS-SSSSSSSTSPTSSSSGNTSPSGEVSIRIIGSGE 120

Query: 121 QDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVEE 180
           QDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVEE
Sbjct: 121 QDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVEE 180

Query: 181 SVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVK 240
           SVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVK
Sbjct: 181 SVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIVK 240

Query: 241 KQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFIIL 300
           KQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFIIL
Sbjct: 241 KQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFIIL 300

Query: 301 VNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFFL 360
           VNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFFL
Sbjct: 301 VNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFFL 360

Query: 361 NKDQGSLFSSLTTGLYLTFKLTSVVEK--------------------------VSAAGDL 420
           NKDQGSLFSSLTTGLYLTFKLTSVVEK                          VSAAGDL
Sbjct: 361 NKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQVSAAGDL 420

Query: 421 CAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQ 457
           CAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQ
Sbjct: 421 CAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLFQ 480

[Close]
BLAST of Carg24464 vs. ExPASy TrEMBL
Match: A0A6J1K6D2 (E3 ubiquitin-protein ligase RNFT1-like OS=Cucurbita maxima OX=3661 GN=LOC111491080 PE=4 SV=1)

HSP 1 Score: 849.4 bits (2193), Expect = 7.2e-243
Identity = 452/483 (93.58%), Postives = 453/483 (93.79%), Query Frame = 0 

Query: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60
           METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE
Sbjct: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60

Query: 61  PIINGSATPDLRVYSQNQNHLMTTTSPSSSSSSSTSPT-SSSSGNTSPSGEVSIRIIGSG 120
           PIINGSATPDLRVYSQNQNHLMTTT+ SSSSSSSTSPT SSSSGNTSPSGEVSIRIIGSG
Sbjct: 61  PIINGSATPDLRVYSQNQNHLMTTTT-SSSSSSSTSPTSSSSSGNTSPSGEVSIRIIGSG 120

Query: 121 EQDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVE 180
           EQDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVE
Sbjct: 121 EQDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVE 180

Query: 181 ESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIV 240
           ESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIV
Sbjct: 181 ESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIV 240

Query: 241 KKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFII 300
           KKQTALKGERKISVLAGTSIAFLVHVIGIYWWCH DDLLYPLVMLPPKTVPPFWHALFII
Sbjct: 241 KKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHRDDLLYPLVMLPPKTVPPFWHALFII 300

Query: 301 LVNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFF 360
           LVNDTM RQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFF
Sbjct: 301 LVNDTMVRQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFF 360

Query: 361 LNKDQGSLFSSLTTGLYLTFKLTSVVEK--------------------------VSAAGD 420
           LNKDQGSLFSSLTTGLYLTFKLTSVVEK                          VSAAGD
Sbjct: 361 LNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSQKEVHYGSYATSEQVSAAGD 420

Query: 421 LCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLF 457
           LCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLF
Sbjct: 421 LCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLF 480

[Close]
BLAST of Carg24464 vs. ExPASy TrEMBL
Match: A0A6J1CZ45 (RING finger and transmembrane domain-containing protein 1-like OS=Momordica charantia OX=3673 GN=LOC111015921 PE=4 SV=1)

HSP 1 Score: 774.2 bits (1998), Expect = 2.9e-220
Identity = 419/491 (85.34%), Postives = 438/491 (89.21%), Query Frame = 0 

Query: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60
           METSASNSDP+ NSSSPTT+ +SSRFG+S+PS+NFFRSPLSVILDYSGILPTRAV HESE
Sbjct: 1   METSASNSDPFSNSSSPTTARSSSRFGLSLPSMNFFRSPLSVILDYSGILPTRAVRHESE 60

Query: 61  PI-INGSATPDLRVYSQNQNHLMTTTSPSSSSSSSTSPTSSSSGNTSPSGEVSIRIIGSG 120
           P+ +NG+ATPDLRV+SQN NHL+T   PSSSSSSS++ T +SSGN+SPSGEVSIRIIGSG
Sbjct: 61  PVPVNGAATPDLRVFSQNHNHLIT---PSSSSSSSSTAT-TSSGNSSPSGEVSIRIIGSG 120

Query: 121 EQD-------PSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRV- 180
           EQD       PS ALVGQAGYEQN G  VSGDQPESPDEERVPLV TASSSIQSGSSRV 
Sbjct: 121 EQDPSSSGLLPSQALVGQAGYEQNSGRSVSGDQPESPDEERVPLVPTASSSIQSGSSRVD 180

Query: 181 SESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAV 240
            ESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITI ISAV
Sbjct: 181 GESGNGVEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAV 240

Query: 241 MYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPP 300
           MYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWW H+DDLLYPLVMLPPKTVPP
Sbjct: 241 MYKSNDIVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWSHTDDLLYPLVMLPPKTVPP 300

Query: 301 FWHALFIILVNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLP 360
           FWHALFIILVNDTMARQVAMALKC LLIYYKNGRGHNFRRQGQILTL+EYTLLLYRALLP
Sbjct: 301 FWHALFIILVNDTMARQVAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLP 360

Query: 361 TPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSVVEK------------------------ 420
           TPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTS+VEK                        
Sbjct: 361 TPVWYRFFLNKDQGSLFSSLTTGLYLTFKLTSIVEKIQSFVAAFKALSRKEVHYGSYATS 420

Query: 421 --VSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFG 457
             V+AAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFG
Sbjct: 421 EQVNAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFG 480

[Close]
BLAST of Carg24464 vs. ExPASy TrEMBL
Match: A0A5D3DSS9 (RING finger and transmembrane domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00530 PE=4 SV=1)

HSP 1 Score: 767.7 bits (1981), Expect = 2.7e-218
Identity = 413/485 (85.15%), Postives = 429/485 (88.45%), Query Frame = 0 

Query: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60
           METS+SNSDPY NSSSPTT+ TSSRFG+S+PSLNFFRSPLSVILDYSGILPTRAV  ES+
Sbjct: 1   METSSSNSDPYSNSSSPTTARTSSRFGLSLPSLNFFRSPLSVILDYSGILPTRAVRDESD 60

Query: 61  PIINGSATPDLRVYSQNQNHLMTTTSPSSSSSSSTSPTSSSSGNTSPSGEVSIRIIGSGE 120
           P+IN +ATPDLR +SQNQNHL+    P+SSSSSS    ++SS NT PSGEVSIRIIGSGE
Sbjct: 61  PVINAAATPDLRGFSQNQNHLI----PTSSSSSS---VTTSSANTIPSGEVSIRIIGSGE 120

Query: 121 QDPSPA--LVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRV-SESGNG 180
           QDPSP+  L  Q GYEQNG LPVSGDQPESPDEERVPLVSTASSSIQSG SRV  ESGNG
Sbjct: 121 QDPSPSALLPNQVGYEQNGRLPVSGDQPESPDEERVPLVSTASSSIQSGGSRVDGESGNG 180

Query: 181 VEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSND 240
           +EESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITI ISAVMYKSND
Sbjct: 181 MEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAVMYKSND 240

Query: 241 IVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALF 300
           IVKKQTALKGERKISVLAGTSI FLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALF
Sbjct: 241 IVKKQTALKGERKISVLAGTSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALF 300

Query: 301 IILVNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYR 360
           IILVNDTM RQ AMALKC LLIYYKNGRGHNFRRQGQILTL+EYTLLLYRALLPTPVWYR
Sbjct: 301 IILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYR 360

Query: 361 FFLNKDQGSLFSSLTTGLYLTFKLTSVVEK--------------------------VSAA 420
           FFLNKDQGSLFSSLTTGLYLTFKLTSVVEK                          V+AA
Sbjct: 361 FFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQVNAA 420

Query: 421 GDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSL 457
           GDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSL
Sbjct: 421 GDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSL 478

[Close]
BLAST of Carg24464 vs. ExPASy TrEMBL
Match: A0A1S3C4F3 (RING finger and transmembrane domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103496765 PE=4 SV=1)

HSP 1 Score: 767.7 bits (1981), Expect = 2.7e-218
Identity = 413/485 (85.15%), Postives = 429/485 (88.45%), Query Frame = 0 

Query: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVPHESE 60
           METS+SNSDPY NSSSPTT+ TSSRFG+S+PSLNFFRSPLSVILDYSGILPTRAV  ES+
Sbjct: 1   METSSSNSDPYSNSSSPTTARTSSRFGLSLPSLNFFRSPLSVILDYSGILPTRAVRDESD 60

Query: 61  PIINGSATPDLRVYSQNQNHLMTTTSPSSSSSSSTSPTSSSSGNTSPSGEVSIRIIGSGE 120
           P+IN +ATPDLR +SQNQNHL+    P+SSSSSS    ++SS NT PSGEVSIRIIGSGE
Sbjct: 61  PVINAAATPDLRGFSQNQNHLI----PTSSSSSS---VTTSSANTIPSGEVSIRIIGSGE 120

Query: 121 QDPSPA--LVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRV-SESGNG 180
           QDPSP+  L  Q GYEQNG LPVSGDQPESPDEERVPLVSTASSSIQSG SRV  ESGNG
Sbjct: 121 QDPSPSALLPNQVGYEQNGRLPVSGDQPESPDEERVPLVSTASSSIQSGGSRVDGESGNG 180

Query: 181 VEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSND 240
           +EESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITI ISAVMYKSND
Sbjct: 181 MEESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITIWISAVMYKSND 240

Query: 241 IVKKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALF 300
           IVKKQTALKGERKISVLAGTSI FLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALF
Sbjct: 241 IVKKQTALKGERKISVLAGTSITFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALF 300

Query: 301 IILVNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYR 360
           IILVNDTM RQ AMALKC LLIYYKNGRGHNFRRQGQILTL+EYTLLLYRALLPTPVWYR
Sbjct: 301 IILVNDTMVRQFAMALKCFLLIYYKNGRGHNFRRQGQILTLVEYTLLLYRALLPTPVWYR 360

Query: 361 FFLNKDQGSLFSSLTTGLYLTFKLTSVVEK--------------------------VSAA 420
           FFLNKDQGSLFSSLTTGLYLTFKLTSVVEK                          V+AA
Sbjct: 361 FFLNKDQGSLFSSLTTGLYLTFKLTSVVEKIQSFVAAFKALSRKEVHYGSYATSEQVNAA 420

Query: 421 GDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSL 457
           GDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSL
Sbjct: 421 GDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSL 478

[Close]
BLAST of Carg24464 vs. TAIR 10
Match: AT5G01960.1 (RING/U-box superfamily protein )

HSP 1 Score: 459.9 bits (1182), Expect = 2.4e-129
Identity = 257/483 (53.21%), Postives = 313/483 (64.80%), Query Frame = 0 

Query: 1   METSASNSDPYPNSSSPTTSPTSSRFGVSIPSLNFFRSPLSVILDYSGILPTRAVP-HES 60
           MET  ++ D +  S    +  ++S         N  ++P+S +L+YSG+   R  P HE+
Sbjct: 1   METPGASHDSFRGSPRRNSILSAS---------NIIQAPISTLLEYSGLFRARPSPSHEA 60

Query: 61  EPIINGSATPDLRVYSQNQNHLMTTTSPSSSSSSSTSPTSSSSGNTSPSGEVSIRIIGSG 120
           E ++                         S  SS  S           +GEV+IRIIG+ 
Sbjct: 61  ETLV-------------------------SDDSSGLS-----------NGEVAIRIIGNT 120

Query: 121 EQDPSPALVGQAGYEQNGGLPVSGDQPESPDEERVPLVSTASSSIQSGSSRVSESGNGVE 180
           EQD   A        + G   + G      D                G+S+ +       
Sbjct: 121 EQD---AETDTNALREPGHSELLGSSATQVD---------PMGGASEGASQAAPGDPAAG 180

Query: 181 ESVNRDSSYQRYDIQQVARWIEQILPFSLLLLIVFIRQHLEGFFITICISAVMYKSNDIV 240
           ++ +RDS YQRYDIQQ ARWIEQILPFSLLLL+VFIRQHL+GFF+ I I+AVM+KSNDI+
Sbjct: 181 DAASRDSPYQRYDIQQAARWIEQILPFSLLLLVVFIRQHLQGFFVAIWIAAVMFKSNDIL 240

Query: 241 KKQTALKGERKISVLAGTSIAFLVHVIGIYWWCHSDDLLYPLVMLPPKTVPPFWHALFII 300
           KKQTALKGER IS L G S+AF  HV+G+YWW   DDLLYPL+MLPPK++PPFWHA+FII
Sbjct: 241 KKQTALKGERHISALIGISVAFTAHVVGVYWWFRKDDLLYPLIMLPPKSIPPFWHAIFII 300

Query: 301 LVNDTMARQVAMALKCLLLIYYKNGRGHNFRRQGQILTLMEYTLLLYRALLPTPVWYRFF 360
           +VNDT+ RQ +M  KC LL+YYKN RG N+R+QGQ+LTL+EY +LLYR+LLPTPVWYRFF
Sbjct: 301 VVNDTLVRQASMIFKCFLLMYYKNSRGRNYRKQGQLLTLVEYFMLLYRSLLPTPVWYRFF 360

Query: 361 LNKDQGSLFSSLTTGLYLTFKLTSVVEK--------------------------VSAAGD 420
           LNKD GSLFSSL TGLYLTFKLTSVVEK                          V+AAGD
Sbjct: 361 LNKDYGSLFSSLMTGLYLTFKLTSVVEKVQSFFTALKALSRKEVHYGSYATTEQVNAAGD 420

Query: 421 LCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRTFGDGSTSLLF 457
           LCAICQEKM+ PILLRCKH+FCEDCVSEWFERERTCPLCRALVKPA+L++FGDGSTSL F
Sbjct: 421 LCAICQEKMHTPILLRCKHMFCEDCVSEWFERERTCPLCRALVKPADLKSFGDGSTSLFF 426

[Close]
BLAST of Carg24464 vs. TAIR 10
Match: AT1G65040.2 (RING/U-box superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 1.4e-09
Identity = 27/58 (46.55%), Postives = 36/58 (62.07%), Query Frame = 0 

Query: 386 EKVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRT 444
           E++S+    C IC+E+M +   L C H+F   C+  W ER+ TCP CRALV PAE  T
Sbjct: 283 EELSSNDATCIICREEMTSAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENAT 340

[Close]
BLAST of Carg24464 vs. TAIR 10
Match: AT1G65040.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 1.4e-09
Identity = 27/58 (46.55%), Postives = 36/58 (62.07%), Query Frame = 0 

Query: 386 EKVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRT 444
           E++S+    C IC+E+M +   L C H+F   C+  W ER+ TCP CRALV PAE  T
Sbjct: 104 EELSSNDATCIICREEMTSAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENAT 161

[Close]
BLAST of Carg24464 vs. TAIR 10
Match: AT1G65040.3 (RING/U-box superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 1.4e-09
Identity = 27/58 (46.55%), Postives = 36/58 (62.07%), Query Frame = 0 

Query: 386 EKVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRT 444
           E++S+    C IC+E+M +   L C H+F   C+  W ER+ TCP CRALV PAE  T
Sbjct: 212 EELSSNDATCIICREEMTSAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVPAENAT 269

[Close]
BLAST of Carg24464 vs. TAIR 10
Match: AT3G16090.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 4.2e-09
Identity = 26/58 (44.83%), Postives = 36/58 (62.07%), Query Frame = 0 

Query: 386 EKVSAAGDLCAICQEKMNAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAELRT 444
           E+++A+   C IC+E+M     L C H+F   C+  W ER++TCP CRALV P E  T
Sbjct: 283 EELTASDATCIICREEMTNAKKLICGHLFHVHCLRSWLERQQTCPTCRALVVPPENAT 340

The following BLAST results are available for this feature:
BLAST of Carg24464 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7030613.11.0e-251100.00RING finger and transmembrane domain-containing protein 1, partial [Cucurbita ar... [more]
KAG6599935.12.0e-24794.61RING finger and transmembrane domain-containing protein 2, partial [Cucurbita ar... [more]
XP_022942268.12.4e-24594.40E3 ubiquitin-protein ligase RNFT1-like [Cucurbita moschata][more]
XP_023536798.11.1e-24293.57E3 ubiquitin-protein ligase RNFT1-like isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022995594.11.5e-24293.58E3 ubiquitin-protein ligase RNFT1-like [Cucurbita maxima][more]
BLAST of Carg24464 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q96EX24.6e-2928.57RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens OX=960... [more]
Q6NZ211.7e-2826.40E3 ubiquitin-protein ligase RNFT1 OS=Danio rerio OX=7955 GN=rnft1 PE=2 SV=2[more]
Q5RAG48.7e-2828.23RING finger and transmembrane domain-containing protein 2 OS=Pongo abelii OX=960... [more]
Q3UF642.8e-2627.90RING finger and transmembrane domain-containing protein 2 OS=Mus musculus OX=100... [more]
Q5M7Z01.5e-2426.28E3 ubiquitin-protein ligase RNFT1 OS=Homo sapiens OX=9606 GN=RNFT1 PE=1 SV=2[more]
BLAST of Carg24464 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FUD51.2e-24594.40E3 ubiquitin-protein ligase RNFT1-like OS=Cucurbita moschata OX=3662 GN=LOC11144... [more]
A0A6J1K6D27.2e-24393.58E3 ubiquitin-protein ligase RNFT1-like OS=Cucurbita maxima OX=3661 GN=LOC1114910... [more]
A0A6J1CZ452.9e-22085.34RING finger and transmembrane domain-containing protein 1-like OS=Momordica char... [more]
A0A5D3DSS92.7e-21885.15RING finger and transmembrane domain-containing protein 1-like OS=Cucumis melo v... [more]
A0A1S3C4F32.7e-21885.15RING finger and transmembrane domain-containing protein 1-like OS=Cucumis melo O... [more]
BLAST of Carg24464 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G01960.12.4e-12953.21RING/U-box superfamily protein [more]
AT1G65040.21.4e-0946.55RING/U-box superfamily protein [more]
AT1G65040.11.4e-0946.55RING/U-box superfamily protein [more]
AT1G65040.31.4e-0946.55RING/U-box superfamily protein [more]
AT3G16090.14.2e-0944.83RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 395..432
e-value: 5.1E-8
score: 42.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 395..433
score: 13.684271
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 393..436
e-value: 1.9E-10
score: 40.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..112
NoneNo IPR availablePANTHERPTHR15860:SF18TRANSCRIPTION FACTOR C2H2 FAMILY-RELATEDcoord: 388..456
NoneNo IPR availablePANTHERPTHR15860:SF18TRANSCRIPTION FACTOR C2H2 FAMILY-RELATEDcoord: 13..389
NoneNo IPR availableCDDcd16532RING-HC_RNFT1_likecoord: 394..433
e-value: 1.58641E-26
score: 98.8953
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 390..438
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 379..442
e-value: 4.2E-17
score: 63.3
IPR044235RING finger and transmembrane domain-containing protein 1/2PANTHERPTHR15860UNCHARACTERIZED RING FINGER-CONTAINING PROTEINcoord: 388..456
IPR044235RING finger and transmembrane domain-containing protein 1/2PANTHERPTHR15860UNCHARACTERIZED RING FINGER-CONTAINING PROTEINcoord: 13..389
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 410..419

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24464-RACarg24464-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1904294 positive regulation of ERAD pathway
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0046872 metal ion binding
molecular_function GO:0061630 ubiquitin protein ligase activity