Carg24417 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAATCTCGAGTTCTCGACCATCTTCGACCTTGAGGGAGCAGTGATCGAATTGGCGCTCTCCCTCCCCCAAAACATTTTGGTGTTCCTGATTTTCTCTGCATTTCAACGATGGATTCTGCTGAACCACTGATTAAGGATCTTGGGGAAAAAGCAAGAAGGGCTTCTCAACTATGGCTTGAAGGTTTTATTGACGCCTGTTGTCTTCACCGTGTTGTGATTCTCTGTCGCAGGTGCCATCTCGCGTCTTCCACTTGTACTTTAACTTCGTGGTTTGATTTTCTATCGCTGAGATTACTGGACGGAATCTATGAACACTAATTCTTATGTTTTTTCCCCCCTTTTTTGCTTTTAATTGAGTTTAACAAGCTTTCTCAAGGATGTATGAGGGGAAAGAAGAAGGATTTTCTCTACTTCTTTACTATGAATTACGCTTCTTTTGTTGTTGTTTTTATAATATCATCTGAAGATGTGTTTCAGGTCGAAAAAGCTTTTGATCCGGACGGGTCAGTGTTTTTTATTGAATGGTTTGATCTTCTTAGGAAGGTAACTCTACTCGACCCTCTCTCTCTCTCTCTCTTTGCGCATCATTTTCGGGATTTAGCATTTACTCTTGTTCCCACTTTTCCGTTTCAAATAAACAACCAATTTGCCTTTTTTTTGTCGGCTCTTCTGTTGTGTTTCTGAATTACGCTCTTTAAGAACTTATTAACTAGTAATATGTTGCAAGGAATTCAAATAGGATAGCACGATCTAGCACAATTTAGGAATTTATAAACTCACAATATTTCTTCCTTTGATTGATATGGAAATTTGCCTGCATCTTTGTCAATCTATTCATATATTGTCTAAAAATTTAATAGGGTTTCGGTTTTACGACGTCGCGGATCATACGTCTCAAAATCATTGAATTTGAACATTTCCCACGATAATGTCAAAAAATAGCAACCGTAACTCAGTCTTTTATTCTGCATGCTTTAACTCAGTCTTGGAGCTAATGAAAACTAAGTTTTGGCTCTTGAGCAGTGGTCTAATCAAACTGAGTCAGAAACTTACTTCTCGACTCTTTCCTTAAAGTTTCTCTCCCTCCTTTTCTCTCTTGAGGGTGAGGGGGATGTCCACATTCTTGTGTCTTGTGGACTACGGTTTAGTTTTTTTGTAATAGAAATTAATAACATATTTCAAGGACCTTAATTTTCTCAGAGATTGTTTTGACATATCTGGTTTTCATCAGCACTTCCCTGTCTCTTTTGTTTCTTAACAAAAAAAATGTTAAACAATGAAAAGTCAGCAGCTTTCTTGCTTCCTTTTTTGCAGTCTATTGATCCTAAACTCAGTTGTCATCCCAACCCTACAATGGATATTACCGGATCAGCAATCAATGATTGGTTCTCACAAGTTGGCCGCATTTGGTGGTGCTTTAAAATTATATTCTTTCTTACGTCATGGACTGATACAACTTTTTTATGTAAGTACATATTTGATGCCATGTTTTTACTTGTGGGGTTAATTAAGAAGTTGTTTGTCCGGCATGCATCACAGATTATTTAATTTTTCCAACAGTTTCTGTCAAAATTAATTGGAAAAAGACGAACCACGTTTAAAATTACGCTTATAAACTTTTCTTTTTGCGAGTTCAGTAATATTCTTATGGATTATAATATTTCCGTTTGACAGGAGAATTCTTTGATATTTCAATATGGTTGCATACTATGATTATTGTACTTAACTGGTTTATATGCAATGACTGAACATGATTCAATCAAGAACCTTGGATAACATATTTATTTATTTTGTGTTCATCTCAATTTTTTTTACCGACTAATTGTTTATGTGAATATTGCTTGCAGTTGTTCTGGTTTTATCCAATGTACATTTTCAGCTTCATTCTGAGCAATATCTGGTATTTCTTTCCCTTCTATTTTCATTCATACTCACACGTTTCTTTTATCATTTCTGCCTCAAATTTGATTTAGTAGGTTTCTAATGCTTATGAATTCTTCAAGCCACATAGTTTCATGATTAAGATTTTATTCAGTTAACGCTTACATTTAAATCTCTGACGTACATCTGGTACACTCATACATCCAGATGGAACGGGTTCAACTAGTAGTTTTTGCAAAGTGACCATTTGTCGATCTGAAGTTTCTGAAGAGTTTCTTTCTGGTCCAGGTACAATGATATTGCTAAACAGGGCTTTGCTGCAATGGGACAATCTGAGCCAACCGCAGTGGACCCCTCAGGACTAAACGATGGATCTTTCAATGCTGCTCAAACAGGAAAATCAATTGGATTGGGGAGGTACGTTTTTAATTTGGTCATTGGTGATTTCTGAAATGTTCTTTGCTGCTTGTTTGATGCACTTTTTTGCTTGATACTTGTTTAACCTAAAGTTTTTCTCAGGGTTGTAATAGGAATAGGAGAGCAGCTATATTCTCTACTTCTGATCAACTCCTTCTTCCTTGAGGTAATTGCTTTGAAATTTTGTCTTTCCTTGATGCTCTTATATTTGTTTCTTTCTACTTCATTTGGTTGTGTGTGGTTATCTTTCTTTTATTATGAGCATTTGTAGAAGCCGAGTTGCTTATTTGCAGTTATATATAACATTCACATTCTTCTTCTTGTATCCAATGTCTAAATTGTTTTCTGATACATGTAGGTCTATGCTACAGGTTTCTTGCCTTTCGTGGGAAAGACACTCAATTTTATGCTTCTTTCTTGGATGTACGCCTACTATTGTTTTGAGTATGTGGTGCTTTCCCTTATAACTTATGATGTGCATCGACTATTCACTTGGTGAACTATTCAATTCAATTCTTTAACTTGTAGGTACAAGTGGAATCTTTCAGAAGTGAGTCTGGATAGAAGGCTGGACTTTTTCGAGTCTAACTGGGCTTTCTTTGCTGGTTTTGGTAGGACTCCATGA CAATCTCGAGTTCTCGACCATCTTCGACCTTGAGGGAGCAGTGATCGAATTGGCGCTCTCCCTCCCCCAAAACATTTTGGTGTTCCTGATTTTCTCTGCATTTCAACGATGGATTCTGCTGAACCACTGATTAAGGATCTTGGGGAAAAAGCAAGAAGGGCTTCTCAACTATGGCTTGAAGGTTTTATTGACGCCTGTTGTCTTCACCGTGTTGTGATTCTCTGTCGCAGGTCGAAAAAGCTTTTGATCCGGACGGGTCAGTGTTTTTTATTGAATGGTTTGATCTTCTTAGGAAGTCTATTGATCCTAAACTCAGTTGTCATCCCAACCCTACAATGGATATTACCGGATCAGCAATCAATGATTGGTTCTCACAAGTTGGCCGCATTTGGTGGTGCTTTAAAATTATATTCTTTCTTACGTCATGGACTGATACAACTTTTTTATTTGTTCTGGTTTTATCCAATGTACATTTTCAGCTTCATTCTGAGCAATATCTGGTACAATGATATTGCTAAACAGGGCTTTGCTGCAATGGGACAATCTGAGCCAACCGCAGTGGACCCCTCAGGACTAAACGATGGATCTTTCAATGCTGCTCAAACAGGAAAATCAATTGGATTGGGGAGGGTTGTAATAGGAATAGGAGAGCAGCTATATTCTCTACTTCTGATCAACTCCTTCTTCCTTGAGGTCTATGCTACAGGTTTCTTGCCTTTCGTGGGAAAGACACTCAATTTTATGCTTCTTTCTTGGATGTACGCCTACTATTGTTTTGAGTACAAGTGGAATCTTTCAGAAGTGAGTCTGGATAGAAGGCTGGACTTTTTCGAGTCTAACTGGGCTTTCTTTGCTGGTTTTGGTAGGACTCCATGA ATGGATTCTGCTGAACCACTGATTAAGGATCTTGGGGAAAAAGCAAGAAGGGCTTCTCAACTATGGCTTGAAGGTTTTATTGACGCCTGTTGTCTTCACCGTGTTGTGATTCTCTGTCGCAGGTCGAAAAAGCTTTTGATCCGGACGGGTCAGTGTTTTTTATTGAATGGTTTGATCTTCTTAGGAAGTCTATTGATCCTAAACTCAGTTGTCATCCCAACCCTACAATGGATATTACCGGATCAGCAATCAATGATTGGTTCTCACAAGTTGGCCGCATTTGGTGGTGCTTTAAAATTATATTCTTTCTTACGTCATGGACTGATACAACTTTTTTATTTGTTCTGGTTTTATCCAATGTACATTTTCAGCTTCATTCTGAGCAATATCTGGTACAATGATATTGCTAAACAGGGCTTTGCTGCAATGGGACAATCTGAGCCAACCGCAGTGGACCCCTCAGGACTAAACGATGGATCTTTCAATGCTGCTCAAACAGGAAAATCAATTGGATTGGGGAGGGTTGTAATAGGAATAGGAGAGCAGCTATATTCTCTACTTCTGATCAACTCCTTCTTCCTTGAGGTCTATGCTACAGGTTTCTTGCCTTTCGTGGGAAAGACACTCAATTTTATGCTTCTTTCTTGGATGTACGCCTACTATTGTTTTGAGTACAAGTGGAATCTTTCAGAAGTGAGTCTGGATAGAAGGCTGGACTTTTTCGAGTCTAACTGGGCTTTCTTTGCTGGTTTTGGTAGGACTCCATGA MDSAEPLIKDLGEKARRASQLWLEGFIDACCLHRVVILCRRSKKLLIRTGQCFLLNGLIFLGSLLILNSVVIPTLQWILPDQQSMIGSHKLAAFGGALKLYSFLRHGLIQLFYLFWFYPMYIFSFILSNIWYNDIAKQGFAAMGQSEPTAVDPSGLNDGSFNAAQTGKSIGLGRVVIGIGEQLYSLLLINSFFLEVYATGFLPFVGKTLNFMLLSWMYAYYCFEYKWNLSEVSLDRRLDFFESNWAFFAGFGRTP Homology
BLAST of Carg24417 vs. NCBI nr
Match: KAG7032381.1 (Protein EI24-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 511.5 bits (1316), Expect = 4.1e-141 Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0
BLAST of Carg24417 vs. NCBI nr
Match: KAG6601621.1 (Protein EI24-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 497.3 bits (1279), Expect = 8.0e-137 Identity = 250/252 (99.21%), Postives = 250/252 (99.21%), Query Frame = 0
BLAST of Carg24417 vs. NCBI nr
Match: XP_022957444.1 (protein EI24 homolog isoform X2 [Cucurbita moschata]) HSP 1 Score: 496.1 bits (1276), Expect = 1.8e-136 Identity = 249/252 (98.81%), Postives = 249/252 (98.81%), Query Frame = 0
BLAST of Carg24417 vs. NCBI nr
Match: XP_022957442.1 (protein EI24 homolog isoform X1 [Cucurbita moschata] >XP_022957443.1 protein EI24 homolog isoform X1 [Cucurbita moschata]) HSP 1 Score: 496.1 bits (1276), Expect = 1.8e-136 Identity = 249/252 (98.81%), Postives = 249/252 (98.81%), Query Frame = 0
BLAST of Carg24417 vs. NCBI nr
Match: XP_023515037.1 (protein EI24 homolog [Cucurbita pepo subsp. pepo] >XP_023515046.1 protein EI24 homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 491.1 bits (1263), Expect = 5.7e-135 Identity = 246/252 (97.62%), Postives = 246/252 (97.62%), Query Frame = 0
BLAST of Carg24417 vs. ExPASy Swiss-Prot
Match: Q5BPL5 (Protein EI24 homolog OS=Arabidopsis thaliana OX=3702 GN=At4g06676 PE=2 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 1.6e-79 Identity = 149/241 (61.83%), Postives = 184/241 (76.35%), Query Frame = 0
BLAST of Carg24417 vs. ExPASy Swiss-Prot
Match: Q54PW9 (Protein EI24 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0284253 PE=3 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 8.6e-17 Identity = 67/253 (26.48%), Postives = 123/253 (48.62%), Query Frame = 0
BLAST of Carg24417 vs. ExPASy Swiss-Prot
Match: Q08DE5 (Etoposide-induced protein 2.4 homolog OS=Bos taurus OX=9913 GN=EI24 PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 9.8e-13 Identity = 58/211 (27.49%), Postives = 95/211 (45.02%), Query Frame = 0
BLAST of Carg24417 vs. ExPASy Swiss-Prot
Match: O14681 (Etoposide-induced protein 2.4 homolog OS=Homo sapiens OX=9606 GN=EI24 PE=1 SV=4) HSP 1 Score: 74.3 bits (181), Expect = 2.2e-12 Identity = 57/211 (27.01%), Postives = 95/211 (45.02%), Query Frame = 0
BLAST of Carg24417 vs. ExPASy Swiss-Prot
Match: Q61070 (Etoposide-induced protein 2.4 OS=Mus musculus OX=10090 GN=Ei24 PE=1 SV=3) HSP 1 Score: 74.3 bits (181), Expect = 2.2e-12 Identity = 57/211 (27.01%), Postives = 95/211 (45.02%), Query Frame = 0
BLAST of Carg24417 vs. ExPASy TrEMBL
Match: A0A6J1H083 (protein EI24 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458837 PE=4 SV=1) HSP 1 Score: 496.1 bits (1276), Expect = 8.6e-137 Identity = 249/252 (98.81%), Postives = 249/252 (98.81%), Query Frame = 0
BLAST of Carg24417 vs. ExPASy TrEMBL
Match: A0A6J1H1Y7 (protein EI24 homolog isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111458837 PE=4 SV=1) HSP 1 Score: 496.1 bits (1276), Expect = 8.6e-137 Identity = 249/252 (98.81%), Postives = 249/252 (98.81%), Query Frame = 0
BLAST of Carg24417 vs. ExPASy TrEMBL
Match: A0A6J1K7C5 (protein EI24 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492932 PE=4 SV=1) HSP 1 Score: 487.3 bits (1253), Expect = 4.0e-134 Identity = 244/252 (96.83%), Postives = 245/252 (97.22%), Query Frame = 0
BLAST of Carg24417 vs. ExPASy TrEMBL
Match: A0A6J1KG79 (protein EI24 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492932 PE=4 SV=1) HSP 1 Score: 487.3 bits (1253), Expect = 4.0e-134 Identity = 244/252 (96.83%), Postives = 245/252 (97.22%), Query Frame = 0
BLAST of Carg24417 vs. ExPASy TrEMBL
Match: A0A1S3BE01 (protein EI24 homolog OS=Cucumis melo OX=3656 GN=LOC103488854 PE=4 SV=1) HSP 1 Score: 462.2 bits (1188), Expect = 1.4e-126 Identity = 228/252 (90.48%), Postives = 240/252 (95.24%), Query Frame = 0
BLAST of Carg24417 vs. TAIR 10
Match: AT4G06676.1 (CONTAINS InterPro DOMAIN/s: Etoposide-induced 2.4 (InterPro:IPR009890); Has 264 Blast hits to 262 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 16; Plants - 79; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). ) HSP 1 Score: 297.4 bits (760), Expect = 1.1e-80 Identity = 149/241 (61.83%), Postives = 184/241 (76.35%), Query Frame = 0
BLAST of Carg24417 vs. TAIR 10
Match: AT4G06676.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Etoposide-induced 2.4 (InterPro:IPR009890); Has 261 Blast hits to 259 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 16; Plants - 81; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). ) HSP 1 Score: 297.4 bits (760), Expect = 1.1e-80 Identity = 149/241 (61.83%), Postives = 184/241 (76.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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