Carg24352 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24352
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	zinc finger protein ZAT11-like
Location	Carg_Chr07: 5391464 .. 5391949 (+)
RNA-Seq Expression	Carg24352
Synteny	Carg24352

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCTAAGAGAATCCGACAAGAATTTGAAGCCTCCGACATCGCCAAATCTTTAATGCTTCTTTCTCAGACATCCAACTCCAAAATTCCCGGACAAAACGCCGCCGTTTTCCAGTGCAAAACCTGCAACCGGCTCTTCTCTTCGTTTCAGGCTCTCGGCGGCCACCGTGCCAGCCACAAACGCCCACGAACGGCGGCTGACGAACCGAAGGATGCGGCGGAATCAAAGAAAATGCACGAGTGTGGACTGTGCGGGCAGGTGTTCTCTACCGGGCAGGCTCTCGGCGGGCACATGCGGCGGCACCGGATGACGACGACGAACGGAGGTGGGTTTTCGGTGGTGCCGGCGGTGGAGAAGATTCCGGTGCTGAACAGGTCCGGGAGTATGGGAGTTAAGTGCTTGGATCTTAATTTGACGCCATTGGAGAATGACTTGAAGCTCCTATTTGGACAAATGGCTCCAAGAGTTGATCTTGTTCTTTGA

mRNA sequence

ATGGCGGCTAAGAGAATCCGACAAGAATTTGAAGCCTCCGACATCGCCAAATCTTTAATGCTTCTTTCTCAGACATCCAACTCCAAAATTCCCGGACAAAACGCCGCCGTTTTCCAGTGCAAAACCTGCAACCGGCTCTTCTCTTCGTTTCAGGCTCTCGGCGGCCACCGTGCCAGCCACAAACGCCCACGAACGGCGGCTGACGAACCGAAGGATGCGGCGGAATCAAAGAAAATGCACGAGTGTGGACTGTGCGGGCAGGTGTTCTCTACCGGGCAGGCTCTCGGCGGGCACATGCGGCGGCACCGGATGACGACGACGAACGGAGGTGGGTTTTCGGTGGTGCCGGCGGTGGAGAAGATTCCGGTGCTGAACAGGTCCGGGAGTATGGGAGTTAAGTGCTTGGATCTTAATTTGACGCCATTGGAGAATGACTTGAAGCTCCTATTTGGACAAATGGCTCCAAGAGTTGATCTTGTTCTTTGA

Coding sequence (CDS)

ATGGCGGCTAAGAGAATCCGACAAGAATTTGAAGCCTCCGACATCGCCAAATCTTTAATGCTTCTTTCTCAGACATCCAACTCCAAAATTCCCGGACAAAACGCCGCCGTTTTCCAGTGCAAAACCTGCAACCGGCTCTTCTCTTCGTTTCAGGCTCTCGGCGGCCACCGTGCCAGCCACAAACGCCCACGAACGGCGGCTGACGAACCGAAGGATGCGGCGGAATCAAAGAAAATGCACGAGTGTGGACTGTGCGGGCAGGTGTTCTCTACCGGGCAGGCTCTCGGCGGGCACATGCGGCGGCACCGGATGACGACGACGAACGGAGGTGGGTTTTCGGTGGTGCCGGCGGTGGAGAAGATTCCGGTGCTGAACAGGTCCGGGAGTATGGGAGTTAAGTGCTTGGATCTTAATTTGACGCCATTGGAGAATGACTTGAAGCTCCTATTTGGACAAATGGCTCCAAGAGTTGATCTTGTTCTTTGA

Protein sequence

MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASHKRPRTAADEPKDAAESKKMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSVVPAVEKIPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQMAPRVDLVL

Homology

[Close]

BLAST of Carg24352 vs. NCBI nr
Match: XP_022962800.1 (zinc finger protein ZAT11-like [Cucurbita moschata] >KAG6595299.1 Zinc finger protein ZAT11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027309.1 Zinc finger protein ZAT11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 320.9 bits (821), Expect = 6.5e-84
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH 60
           MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH
Sbjct: 1   MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH 60

Query: 61  KRPRTAADEPKDAAESKKMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSVVPAVEK 120
           KRPRTAADEPKDAAESKKMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSVVPAVEK
Sbjct: 61  KRPRTAADEPKDAAESKKMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSVVPAVEK 120

Query: 121 IPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQMAPRVDLVL 162
           IPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQMAPRVDLVL
Sbjct: 121 IPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQMAPRVDLVL 161

[Close]

BLAST of Carg24352 vs. NCBI nr
Match: XP_023517898.1 (zinc finger protein ZAT11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 319.3 bits (817), Expect = 1.9e-83
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH 60
           MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH
Sbjct: 1   MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH 60

Query: 61  KRPRTAADEPKDAAESKKMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSVVPAVEK 120
           KRPRTAADEPKDAAESKKMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSVVPAVEK
Sbjct: 61  KRPRTAADEPKDAAESKKMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSVVPAVEK 120

Query: 121 IPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQMAPRVDLVL 162
           IPVLNRSGSMGVKCLDLNLTPLENDLKLLFG+MAPRVDLVL
Sbjct: 121 IPVLNRSGSMGVKCLDLNLTPLENDLKLLFGKMAPRVDLVL 161

[Close]

BLAST of Carg24352 vs. NCBI nr
Match: XP_022972734.1 (zinc finger protein ZAT11-like [Cucurbita maxima])

HSP 1 Score: 308.1 bits (788), Expect = 4.3e-80
Identity = 157/164 (95.73%), Postives = 159/164 (96.95%), Query Frame = 0


Query: 1   MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH 60
           MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH
Sbjct: 1   MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH 60

Query: 61  KRPRTAADEPKDAAESKKMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSV---VPA 120
           KRPRTAA+EPKDAAESKKMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSV   VPA
Sbjct: 61  KRPRTAAEEPKDAAESKKMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSVVPLVPA 120

Query: 121 VEKIPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQMAPRVDLVL 162
           VEKIPVL RSGSMGV CLDLNLTPLENDLKLLFG+MAPRVDLVL
Sbjct: 121 VEKIPVLKRSGSMGVNCLDLNLTPLENDLKLLFGKMAPRVDLVL 164

[Close]

BLAST of Carg24352 vs. NCBI nr
Match: XP_038883310.1 (zinc finger protein ZAT11 [Benincasa hispida])

HSP 1 Score: 229.2 bits (583), Expect = 2.6e-56
Identity = 127/167 (76.05%), Postives = 133/167 (79.64%), Query Frame = 0


Query: 1   MAAKRIRQEFEASDIAKSLMLLS---QTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHR 60
           MAAKRIRQEFE SDIAKSLML S   +TSN KI  QN AVF+CKTCNR F SFQALGGHR
Sbjct: 1   MAAKRIRQEFETSDIAKSLMLPSYGIETSNPKIQPQNVAVFECKTCNRQFPSFQALGGHR 60

Query: 61  ASHKRPRTAADEPKDAAESK-KMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSVVP 120
           ASHKRPRTAA+EPKD AE K KMHECGLCGQ FS+GQALGGHMRRHR+T         V 
Sbjct: 61  ASHKRPRTAAEEPKDTAELKQKMHECGLCGQEFSSGQALGGHMRRHRVTPV------AVA 120

Query: 121 AVEKIPVLNRSGSMGVKC--LDLNLTPLENDLKLLFGQMAPRVDLVL 162
             EKIPVL RSGS  V C  LDLNLTPLENDLKLLFG+MAP VDLVL
Sbjct: 121 VAEKIPVLKRSGSTRVICLELDLNLTPLENDLKLLFGKMAPTVDLVL 161

[Close]

BLAST of Carg24352 vs. NCBI nr
Match: XP_023545102.1 (zinc finger protein ZAT11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 223.0 bits (567), Expect = 1.8e-54
Identity = 119/165 (72.12%), Postives = 135/165 (81.82%), Query Frame = 0


Query: 1   MAAKRIRQEFEASDIAKSLMLLS---QTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHR 60
           MAAKRIRQEFEA+D+AKS M +S   ++SN  IP QNA+VF+CKTCNR FSSFQALGGHR
Sbjct: 1   MAAKRIRQEFEATDMAKSPMFISYGIESSNPIIPFQNASVFECKTCNRHFSSFQALGGHR 60

Query: 61  ASHKRPRTAADEPKDAAESK-KMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSVVP 120
           ASHKRPRT A++PK+A + K KMHECGLCGQ FS+GQALGGHMRRHR+T         VP
Sbjct: 61  ASHKRPRTTAEDPKEAVDLKHKMHECGLCGQEFSSGQALGGHMRRHRVT--------AVP 120

Query: 121 AVEKIPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQMAPRVDLVL 162
             EKIPVL RSGS  + CLDLNLTPLENDLK+LFG+MAP VDLVL
Sbjct: 121 --EKIPVLKRSGSRRIMCLDLNLTPLENDLKMLFGKMAPTVDLVL 155

[Close]

BLAST of Carg24352 vs. ExPASy Swiss-Prot
Match: Q9SLD4 (Zinc finger protein ZAT11 OS=Arabidopsis thaliana OX=3702 GN=ZAT11 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.1e-33
Identity = 87/175 (49.71%), Postives = 109/175 (62.29%), Query Frame = 0


Query: 4   KRIRQEFEAS----DIAKSLMLLSQTSNSKIPGQN-------AAVFQCKTCNRLFSSFQA 63
           KR R +FE S    DIAK LM+L+QTS  K  G N       +  F+CKTCN+ FSSFQA
Sbjct: 2   KRERSDFEESLKNIDIAKCLMILAQTSMVKQIGLNQHTESHTSNQFECKTCNKRFSSFQA 61

Query: 64  LGGHRASHKRPRTAADEPKDAA------ESKKMHECGLCGQVFSTGQALGGHMRRHRMTT 123
           LGGHRASHK+P+    E KD        +    H+C +C Q F TGQALGGHMRRHR + 
Sbjct: 62  LGGHRASHKKPKLTV-EQKDVKHLSNDYKGNHFHKCSICSQSFGTGQALGGHMRRHRSSM 121

Query: 124 TNGGGFSVVPAVEKIPVLNRSG-SMGVKCLDLNLTPLENDLKLLFGQ-MAPRVDL 160
           T    F + P +  +PVL R G S  +  LDLNLTPLENDL+ +FG+   P++D+
Sbjct: 122 TVEPSF-ISPMIPSMPVLKRCGSSKRILSLDLNLTPLENDLEYIFGKTFVPKIDM 174

[Close]

BLAST of Carg24352 vs. ExPASy Swiss-Prot
Match: Q9LFG0 (Zinc finger protein ZAT18 OS=Arabidopsis thaliana OX=3702 GN=ZAT18 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.9e-31
Identity = 85/175 (48.57%), Postives = 111/175 (63.43%), Query Frame = 0


Query: 4   KRIRQEFEAS----DIAKSLMLLS-----------QTSNSKIPGQNAAVFQCKTCNRLFS 63
           KR R ++E S    DI +SLM+LS           Q++ SK    N   F+CKTCNR F 
Sbjct: 2   KRDRSDYEESMKHIDIVESLMMLSRSFVVKQIDVKQSTGSKTNHNNH--FECKTCNRKFD 61

Query: 64  SFQALGGHRASHKRPRTAADEPKDAAESKK--MHECGLCGQVFSTGQALGGHMRRHRMTT 123
           SFQALGGHRASHK+P+   D+ +    +K+  MH+C +C Q+F TGQALGGHMR+HR + 
Sbjct: 62  SFQALGGHRASHKKPKLIVDQEQVKHRNKENDMHKCTICDQMFGTGQALGGHMRKHRTSM 121

Query: 124 TNGGGFSVVPA-VEKIPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQ-MAPRVDL 160
                 S+VP+ V   PV NR  S   + LDLNLTPLENDL L+FG+ + P++DL
Sbjct: 122 ITEQ--SIVPSVVYSRPVFNRCSS-SKEILDLNLTPLENDLVLIFGKNLVPQIDL 171

[Close]

BLAST of Carg24352 vs. ExPASy Swiss-Prot
Match: Q681X4 (Zinc finger protein ZAT5 OS=Arabidopsis thaliana OX=3702 GN=ZAT5 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.1e-20
Identity = 67/169 (39.64%), Postives = 90/169 (53.25%), Query Frame = 0


Query: 23  SQTSNSKIPGQNAA--VFQCKTCNRLFSSFQALGGHRASHKRPRTAADE--------PKD 82
           S+  + KI  +N++  V++CKTCNR FSSFQALGGHRASHK+PRT+ +E        PK 
Sbjct: 98  SRKIHQKISSENSSFYVYECKTCNRTFSSFQALGGHRASHKKPRTSTEEKTRLPLTQPKS 157

Query: 83  AA-------------------------ESKKMHECGLCGQVFSTGQALGGHMRRHRMTTT 142
           +A                         ++ K+HEC +CG  F++GQALGGHMRRHR   T
Sbjct: 158 SASEEGQNSHFKVSGSALASQASNIINKANKVHECSICGSEFTSGQALGGHMRRHRTAVT 217

Query: 143 NGGGFSVVPAV------EKIPV-LNRSGSMGVKC--LDLNLTPLENDLK 148
                +    V      E+I + + RS     K   LDLNL   E+DL+
Sbjct: 218 TISPVAATAEVSRNSTEEEIEINIGRSMEQQRKYLPLDLNLPAPEDDLR 266

[Close]

BLAST of Carg24352 vs. ExPASy Swiss-Prot
Match: Q42410 (Zinc finger protein ZAT12 OS=Arabidopsis thaliana OX=3702 GN=ZAT12 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.2e-20
Identity = 64/144 (44.44%), Postives = 78/144 (54.17%), Query Frame = 0


Query: 16  AKSLMLLSQTSNSKIP-GQNAAVFQCKTCNRLFSSFQALGGHRASHKRPRTAADEPKDAA 75
           A  LMLLS+     +  G    VF CKTC + F SFQALGGHRASHK+P   A       
Sbjct: 16  ANCLMLLSRVGQENVDGGDQKRVFTCKTCLKQFHSFQALGGHRASHKKPNNDALSSGLMK 75

Query: 76  ESK-KMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSVVPAVEKIPVL----NRSGS 135
           + K   H C +CG  F  GQALGGHMRRHR  +   GG  V  A+   P +      S  
Sbjct: 76  KVKTSSHPCPICGVEFPMGQALGGHMRRHRNESGAAGGALVTRALLPEPTVTTLKKSSSG 135

Query: 136 MGVKCLDLNLTPLEN-DLKLLFGQ 153
             V CLDL+L  ++N +LKL  G+
Sbjct: 136 KRVACLDLSLGMVDNLNLKLELGR 159

[Close]

BLAST of Carg24352 vs. ExPASy Swiss-Prot
Match: Q42453 (Zinc finger protein ZAT7 OS=Arabidopsis thaliana OX=3702 GN=ZAT7 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.2e-18
Identity = 62/143 (43.36%), Postives = 78/143 (54.55%), Query Frame = 0


Query: 11  EASDIAKSLMLLSQTSN-SKIPGQNAAVFQCKTCNRLFSSFQALGGHRASHKRPRTAADE 70
           E    AK LMLLS+        G +  VF+CKTC + FSSFQALGGHRASHK+    +D 
Sbjct: 12  EEDTTAKCLMLLSRVGECGGGCGGDERVFRCKTCLKEFSSFQALGGHRASHKK-LINSDN 71

Query: 71  PK-----DAAESKKMHECGLCGQVFSTGQALGGHMRRHRMTTTNGG--GFSVVPAVEKIP 130
           P         ++K  H C +CG  F  GQALGGHMRRHR    +G     S +P    + 
Sbjct: 72  PSLLGSLSNKKTKTSHPCPICGVKFPMGQALGGHMRRHRNEKVSGSLVTRSFLPETTTVT 131

Query: 131 VLNR-SGSMGVKCLDLNLTPLEN 145
            L + S    V CLDL+L  +E+
Sbjct: 132 ALKKFSSGKRVACLDLDLDSMES 153

[Close]

BLAST of Carg24352 vs. ExPASy TrEMBL
Match: A0A6J1HG38 (zinc finger protein ZAT11-like OS=Cucurbita moschata OX=3662 GN=LOC111463184 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.1e-84
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH 60
           MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH
Sbjct: 1   MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH 60

Query: 61  KRPRTAADEPKDAAESKKMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSVVPAVEK 120
           KRPRTAADEPKDAAESKKMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSVVPAVEK
Sbjct: 61  KRPRTAADEPKDAAESKKMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSVVPAVEK 120

Query: 121 IPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQMAPRVDLVL 162
           IPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQMAPRVDLVL
Sbjct: 121 IPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQMAPRVDLVL 161

[Close]

BLAST of Carg24352 vs. ExPASy TrEMBL
Match: A0A6J1ICF2 (zinc finger protein ZAT11-like OS=Cucurbita maxima OX=3661 GN=LOC111471248 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.1e-80
Identity = 157/164 (95.73%), Postives = 159/164 (96.95%), Query Frame = 0


Query: 1   MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH 60
           MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH
Sbjct: 1   MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH 60

Query: 61  KRPRTAADEPKDAAESKKMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSV---VPA 120
           KRPRTAA+EPKDAAESKKMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSV   VPA
Sbjct: 61  KRPRTAAEEPKDAAESKKMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSVVPLVPA 120

Query: 121 VEKIPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQMAPRVDLVL 162
           VEKIPVL RSGSMGV CLDLNLTPLENDLKLLFG+MAPRVDLVL
Sbjct: 121 VEKIPVLKRSGSMGVNCLDLNLTPLENDLKLLFGKMAPRVDLVL 164

[Close]

BLAST of Carg24352 vs. ExPASy TrEMBL
Match: A0A6J1GDW3 (zinc finger protein ZAT11-like OS=Cucurbita moschata OX=3662 GN=LOC111453109 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 7.5e-54
Identity = 117/165 (70.91%), Postives = 132/165 (80.00%), Query Frame = 0


Query: 1   MAAKRIRQEFEASDIAKSLMLLS---QTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHR 60
           MAAKRIRQEFE SD+AKS M +S   ++SN  IP QNA+VF CKTCNR FSSFQALGGHR
Sbjct: 1   MAAKRIRQEFEVSDMAKSPMFISYGIESSNPIIPFQNASVFDCKTCNRHFSSFQALGGHR 60

Query: 61  ASHKRPRTAADEPKDAAESK-KMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSVVP 120
           ASHKRPRT A++PK+  +SK KMHECGLCGQ FS+GQALGGHMRRHR+T         VP
Sbjct: 61  ASHKRPRTTAEDPKEPVDSKHKMHECGLCGQEFSSGQALGGHMRRHRVT--------AVP 120

Query: 121 AVEKIPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQMAPRVDLVL 162
             EKIPVL RSGS  + CLDLNLTPLENDLK+LFG+M P VDLV+
Sbjct: 121 --EKIPVLKRSGSRRIMCLDLNLTPLENDLKMLFGKMTPTVDLVI 155

[Close]

BLAST of Carg24352 vs. ExPASy TrEMBL
Match: A0A6J1INJ8 (zinc finger protein ZAT11-like OS=Cucurbita maxima OX=3661 GN=LOC111478039 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.2e-53
Identity = 117/165 (70.91%), Postives = 131/165 (79.39%), Query Frame = 0


Query: 1   MAAKRIRQEFEASDIAKSLMLLS---QTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHR 60
           MAAKRIR+EFE SD+AKS M +S   + SN  IP QNA+VF+CKTCNR FSSFQALGGHR
Sbjct: 1   MAAKRIREEFEVSDMAKSRMFISYGIEPSNPIIPFQNASVFECKTCNRHFSSFQALGGHR 60

Query: 61  ASHKRPRTAADEPKDAAESK-KMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSVVP 120
           ASHKRPRT A++PK+  + K KMHEC LCGQ FS+GQALGGHMRRHR+T         VP
Sbjct: 61  ASHKRPRTTAEDPKEPVDLKHKMHECSLCGQEFSSGQALGGHMRRHRVT--------AVP 120

Query: 121 AVEKIPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQMAPRVDLVL 162
             EKIPVL RSGS  + CLDLNLTPLENDLK+LFGQMAP VDLVL
Sbjct: 121 --EKIPVLKRSGSRRIMCLDLNLTPLENDLKMLFGQMAPTVDLVL 155

[Close]

BLAST of Carg24352 vs. ExPASy TrEMBL
Match: A0A0A0KXE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293330 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.9e-52
Identity = 118/168 (70.24%), Postives = 132/168 (78.57%), Query Frame = 0


Query: 1   MAAKRIRQEFEASDIAKSLMLLS----QTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGH 60
           MAAKRIR++FEASDIAKSL LLS    ++S+ K   QNAAVF+CKTCNR F SFQALGGH
Sbjct: 1   MAAKRIREQFEASDIAKSLTLLSYGIQESSDLKFQPQNAAVFECKTCNRQFPSFQALGGH 60

Query: 61  RASHKRPRTAADEPKDAAESK-KMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSVV 120
           RASHKRPRT+ +EPKD A+ K K+HECGLCGQ FS+GQALGGHMRRHR+          V
Sbjct: 61  RASHKRPRTSVEEPKDTADLKQKIHECGLCGQEFSSGQALGGHMRRHRVPPL------AV 120

Query: 121 PAVEKIPVLNRSGSMGVKC--LDLNLTPLENDLKLLFGQMAPRVDLVL 162
              EKIPVL RSGS  V C  LDLNLTPLENDLKLLFG+MAP V+LVL
Sbjct: 121 AVAEKIPVLKRSGSTRVMCLDLDLNLTPLENDLKLLFGKMAPAVNLVL 162

[Close]

BLAST of Carg24352 vs. TAIR 10
Match: AT2G37430.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 144.4 bits (363), Expect = 7.7e-35
Identity = 87/175 (49.71%), Postives = 109/175 (62.29%), Query Frame = 0


Query: 4   KRIRQEFEAS----DIAKSLMLLSQTSNSKIPGQN-------AAVFQCKTCNRLFSSFQA 63
           KR R +FE S    DIAK LM+L+QTS  K  G N       +  F+CKTCN+ FSSFQA
Sbjct: 2   KRERSDFEESLKNIDIAKCLMILAQTSMVKQIGLNQHTESHTSNQFECKTCNKRFSSFQA 61

Query: 64  LGGHRASHKRPRTAADEPKDAA------ESKKMHECGLCGQVFSTGQALGGHMRRHRMTT 123
           LGGHRASHK+P+    E KD        +    H+C +C Q F TGQALGGHMRRHR + 
Sbjct: 62  LGGHRASHKKPKLTV-EQKDVKHLSNDYKGNHFHKCSICSQSFGTGQALGGHMRRHRSSM 121

Query: 124 TNGGGFSVVPAVEKIPVLNRSG-SMGVKCLDLNLTPLENDLKLLFGQ-MAPRVDL 160
           T    F + P +  +PVL R G S  +  LDLNLTPLENDL+ +FG+   P++D+
Sbjct: 122 TVEPSF-ISPMIPSMPVLKRCGSSKRILSLDLNLTPLENDLEYIFGKTFVPKIDM 174

[Close]

BLAST of Carg24352 vs. TAIR 10
Match: AT3G53600.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 136.0 bits (341), Expect = 2.7e-32
Identity = 85/175 (48.57%), Postives = 111/175 (63.43%), Query Frame = 0


Query: 4   KRIRQEFEAS----DIAKSLMLLS-----------QTSNSKIPGQNAAVFQCKTCNRLFS 63
           KR R ++E S    DI +SLM+LS           Q++ SK    N   F+CKTCNR F 
Sbjct: 2   KRDRSDYEESMKHIDIVESLMMLSRSFVVKQIDVKQSTGSKTNHNNH--FECKTCNRKFD 61

Query: 64  SFQALGGHRASHKRPRTAADEPKDAAESKK--MHECGLCGQVFSTGQALGGHMRRHRMTT 123
           SFQALGGHRASHK+P+   D+ +    +K+  MH+C +C Q+F TGQALGGHMR+HR + 
Sbjct: 62  SFQALGGHRASHKKPKLIVDQEQVKHRNKENDMHKCTICDQMFGTGQALGGHMRKHRTSM 121

Query: 124 TNGGGFSVVPA-VEKIPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQ-MAPRVDL 160
                 S+VP+ V   PV NR  S   + LDLNLTPLENDL L+FG+ + P++DL
Sbjct: 122 ITEQ--SIVPSVVYSRPVFNRCSS-SKEILDLNLTPLENDLVLIFGKNLVPQIDL 171

[Close]

BLAST of Carg24352 vs. TAIR 10
Match: AT2G28710.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 120.2 bits (300), Expect = 1.6e-27
Identity = 75/157 (47.77%), Postives = 94/157 (59.87%), Query Frame = 0


Query: 4   KRIRQEFE-ASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASHKR 63
           +R R + E  +++A  L+LLS+   +      + VF CKTCN+ F SFQALGGHRASH+R
Sbjct: 2   ERGRSDMEMINNMANCLILLSKAHQN---DTKSRVFACKTCNKEFPSFQALGGHRASHRR 61

Query: 64  PRT----AADEPKDAAESKKMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSVVPAV 123
                  A   PK     K  HEC +CG  F+ GQALGGHMR+HR  +  GGG S+ PA 
Sbjct: 62  SAALEGHAPPSPKRVKPVK--HECPICGAEFAVGQALGGHMRKHRGGSGGGGGRSLAPAT 121

Query: 124 EKIPVLNRSGSMG--VKCLDLNLTPLEN-DLKLLFGQ 153
             + +    G  G  V CLDLNLTPLEN DLKL  G+
Sbjct: 122 APVTMKKSGGGNGKRVLCLDLNLTPLENEDLKLELGR 153

[Close]

BLAST of Carg24352 vs. TAIR 10
Match: AT2G28200.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 101.3 bits (251), Expect = 7.5e-22
Identity = 67/169 (39.64%), Postives = 90/169 (53.25%), Query Frame = 0


Query: 23  SQTSNSKIPGQNAA--VFQCKTCNRLFSSFQALGGHRASHKRPRTAADE--------PKD 82
           S+  + KI  +N++  V++CKTCNR FSSFQALGGHRASHK+PRT+ +E        PK 
Sbjct: 98  SRKIHQKISSENSSFYVYECKTCNRTFSSFQALGGHRASHKKPRTSTEEKTRLPLTQPKS 157

Query: 83  AA-------------------------ESKKMHECGLCGQVFSTGQALGGHMRRHRMTTT 142
           +A                         ++ K+HEC +CG  F++GQALGGHMRRHR   T
Sbjct: 158 SASEEGQNSHFKVSGSALASQASNIINKANKVHECSICGSEFTSGQALGGHMRRHRTAVT 217

Query: 143 NGGGFSVVPAV------EKIPV-LNRSGSMGVKC--LDLNLTPLENDLK 148
                +    V      E+I + + RS     K   LDLNL   E+DL+
Sbjct: 218 TISPVAATAEVSRNSTEEEIEINIGRSMEQQRKYLPLDLNLPAPEDDLR 266

[Close]

BLAST of Carg24352 vs. TAIR 10
Match: AT5G59820.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 99.0 bits (245), Expect = 3.7e-21
Identity = 64/144 (44.44%), Postives = 78/144 (54.17%), Query Frame = 0


Query: 16  AKSLMLLSQTSNSKIP-GQNAAVFQCKTCNRLFSSFQALGGHRASHKRPRTAADEPKDAA 75
           A  LMLLS+     +  G    VF CKTC + F SFQALGGHRASHK+P   A       
Sbjct: 16  ANCLMLLSRVGQENVDGGDQKRVFTCKTCLKQFHSFQALGGHRASHKKPNNDALSSGLMK 75

Query: 76  ESK-KMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSVVPAVEKIPVL----NRSGS 135
           + K   H C +CG  F  GQALGGHMRRHR  +   GG  V  A+   P +      S  
Sbjct: 76  KVKTSSHPCPICGVEFPMGQALGGHMRRHRNESGAAGGALVTRALLPEPTVTTLKKSSSG 135

Query: 136 MGVKCLDLNLTPLEN-DLKLLFGQ 153
             V CLDL+L  ++N +LKL  G+
Sbjct: 136 KRVACLDLSLGMVDNLNLKLELGR 159

The following BLAST results are available for this feature:

BLAST of Carg24352 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962800.1	6.5e-84	100.00	zinc finger protein ZAT11-like [Cucurbita moschata] >KAG6595299.1 Zinc finger pr...	[more]
XP_023517898.1	1.9e-83	99.38	zinc finger protein ZAT11-like [Cucurbita pepo subsp. pepo]	[more]
XP_022972734.1	4.3e-80	95.73	zinc finger protein ZAT11-like [Cucurbita maxima]	[more]
XP_038883310.1	2.6e-56	76.05	zinc finger protein ZAT11 [Benincasa hispida]	[more]
XP_023545102.1	1.8e-54	72.12	zinc finger protein ZAT11-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg24352 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SLD4	1.1e-33	49.71	Zinc finger protein ZAT11 OS=Arabidopsis thaliana OX=3702 GN=ZAT11 PE=2 SV=1	[more]
Q9LFG0	3.9e-31	48.57	Zinc finger protein ZAT18 OS=Arabidopsis thaliana OX=3702 GN=ZAT18 PE=2 SV=1	[more]
Q681X4	1.1e-20	39.64	Zinc finger protein ZAT5 OS=Arabidopsis thaliana OX=3702 GN=ZAT5 PE=2 SV=1	[more]
Q42410	5.2e-20	44.44	Zinc finger protein ZAT12 OS=Arabidopsis thaliana OX=3702 GN=ZAT12 PE=2 SV=1	[more]
Q42453	2.2e-18	43.36	Zinc finger protein ZAT7 OS=Arabidopsis thaliana OX=3702 GN=ZAT7 PE=2 SV=1	[more]

BLAST of Carg24352 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HG38	3.1e-84	100.00	zinc finger protein ZAT11-like OS=Cucurbita moschata OX=3662 GN=LOC111463184 PE=...	[more]
A0A6J1ICF2	2.1e-80	95.73	zinc finger protein ZAT11-like OS=Cucurbita maxima OX=3661 GN=LOC111471248 PE=4 ...	[more]
A0A6J1GDW3	7.5e-54	70.91	zinc finger protein ZAT11-like OS=Cucurbita moschata OX=3662 GN=LOC111453109 PE=...	[more]
A0A6J1INJ8	2.2e-53	70.91	zinc finger protein ZAT11-like OS=Cucurbita maxima OX=3661 GN=LOC111478039 PE=4 ...	[more]
A0A0A0KXE6	1.9e-52	70.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293330 PE=4 SV=1	[more]

BLAST of Carg24352 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37430.1	7.7e-35	49.71	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G53600.1	2.7e-32	48.57	C2H2-type zinc finger family protein	[more]
AT2G28710.1	1.6e-27	47.77	C2H2-type zinc finger family protein	[more]
AT2G28200.1	7.5e-22	39.64	C2H2-type zinc finger family protein	[more]
AT5G59820.1	3.7e-21	44.44	C2H2-type zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 80..102 e-value: 0.034 score: 23.3 coord: 38..60 e-value: 0.38 score: 19.8
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 40..60
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 82..102
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 38..65 score: 10.325359
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 80..107 score: 9.909698
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 36..102 e-value: 2.3E-10 score: 42.6
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 37..62 e-value: 3.8E-11 score: 42.7 coord: 80..103 e-value: 1.6E-9 score: 37.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..73
None	No IPR available	PANTHER	PTHR26374:SF355	AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN, PUTATIVE-RELATED	coord: 13..156
None	No IPR available	PANTHER	PTHR26374	ZINC FINGER PROTEIN ZAT5	coord: 13..156
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 37..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24352-RA	Carg24352-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010200	response to chitin