Carg24283 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24283
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ABC transporter-like protein
Location	Carg_Chr15: 468942 .. 473257 (-)
RNA-Seq Expression	Carg24283
Synteny	Carg24283

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAATATCGTCCAGACCAATGTATCAAATCTCTCCACCCATGTGCATCTTCGAGTGAATTTGAGAAACAAAATCGGACAAATGATTCAGTTTGTGTGTTTACAAGCTAAGCTATTGGGAGATTATTGAAGCGAAGGTACATTAACTTCAAATTGGGGATTTTGACAAATTTTGATGCTTGAAAACGGCATTCAGCTTCAGCCCATTGGCCTGGCTCGTCGTCTCCGCTGAACGGATCCCATGGCCACCTTTGTTTCTGTTTCTAAGTTGTTCGTTGGCTGGAAACCAACCCCACTATCAAATTTACCTGCGCGCGACTCCTTCAGCAGGTGTTCGATTCATATCACCACTGCAATCCTTCCATTTTCTTTCTCTTATTTTTCGAACTCAAGCCCTTGTTTCGTGACAACTCCTAACTAGCGTATTGTTTGTCACTTTTATTTGGCGTTTGTAGTTCGAATTCCCTAAGAACCAATGCTCTCTCAGTGAAATCCGATTACTCTTGCTTTGAAGTGAGTTACAATCTCTCAACTCTATCATTCACTGATTATTGCCGTTAAGCAGTTTTCCTGTTGCCCTAATTGAGATTGACCCATTTGATTTCGTTACAATTTCTGCAATTTGCTGGAATGTGGATGTTATTGTGAAATTTGATTCGGCTACTAAGTCTGTTTGTGATTCTTAAGGTTAGGGATTTAAGCTATCGACCTCCAGGGACCGAGCATTCTCTTCTGGACACAGTTAATTTTTCCCTTCGAGAGAAAAGGTACAATTTGCTGCTCTGGTTTCACAGTGTATTTTGGTGTTGTATACCGTGACGAGGGGTTCCAGCTTCGAGAGAAAATTTATCCCATACTCTCTAATGATGAACATGGATAGGAAAATGGTTGTAAAAGTTGATGATTGAATAAATTATCTTTCTGAAGCCTAAAATTTTCTTGAGTTCTAGTAATTATATTACAGTTCACCCTGGCTAACCTGAATCAACTATCAAGGCACTTGTGAAGGACTTGTCTGTCCTCCCTTTTAGTAATAAAGGGCGTTTCACCACATATCTCTAACATGGACTTCTTCCCTAAGAGTTTATTAATGCTCACATATACCTCATTATCGTCCCCACATTACTCTCCTTTCTGTTGATTTATGCAGTTTTGGGTTAATTTTTGGACAAAGTGGAAGTGGGAAAACTACTTTATTGCAGGTTTAGCTATTTTCTTTGAAATTTTGATGTATTAGGCCTTCCCTTACTTCTCTCACGGTCTTTTTTATCTACTTATTTGTTGATTCATTGTTTATGAGTATGATAATCTTTCTTCCCGTTCTTGTTTAGCTTCTTGCAGGTCTGAGCAAACCAACTTCAGGTTCCATTTATGTCCAAAAGTACGGTAAAGATGACAAACCATGTCAGTCTTCTCAACCGTTAACCACTGATAGGGTTGGCATTGTCTTTCAATTTCCAGAGAGGTATCGTCCATTTTGGTTAGCCTTGATAAGACTAATATTTCGAAGCTAGTTTTGAATATCGTTGAACTAGAAATGTGATTAAGGTTGCTTTAATCTCATAGAGTCGTGTGGCCTTTCTTTTTCATACATATCACCTCATTTTCCTGCTATTTATCTTCATTCCTTTGGATGGGAAACACTTGTATTAATGAACAAAGTATGTAGGAAGGATTAGGTTTCCAATCCGAATGATCGGAACAAAGGAGCTATAGAAGAACTCTTCCATTGGTCAAAAGGAAAAAAAAAAAAAAAAAAAAAAAGAAAAGTGGAAAAAAACAAAACTTGTTAAAGAGGAAGTCATCTAGACACATTAATCCAGTCCTAAATTTCATTCTGCTCCTTACATTTCCCTCAACAAATCTTTCTTCTTTACTAATTTTTCAAGAAAATAAAAAACCGATAAATCTTCATCATTTATAGCTTGTGAAATGATAAGTTACTGAAAATATTCTTTTGCTGAAGGTAGGTACTTTGTTGCAGACAACGTGCTTGATGAAGTCACATTTGGGTGGCCGCGGCAAAAGAGTGATGTTTATTTGAAACAGGACCTTGCCTTGAGACTCCAAAGAGCAATTAATTGGGTACTTTTGATCTTTCCCATCAACAGCTGATTACATTCTTTTTGTTATGTTGGCATACATGTTTTTTTATTATTTTATCATAATTATTATTATCGCGATGGATTGCTTTATTCCTTTCCGTCGATGACTGTAGGTGGGATTAAATGGCATACCCTTGGACAAAGATCCTCACTCTCTCAGTGGTGGCTACAAGCGCCGTCTTGCCTTGGCAATCCAATTGGTAAGCCTAAATAACAAAATGAACTCATGCGAGGAATAGAATCTAGAGTACAAGCATTCTTAAACAGAACATATACATTGAATAAGTCATTTTTTTGCAGGTGCAGTTCCCAGATCTGTTATTACTGGATGAGCCTCTAGCTGGTCTTGGTATGAAGATCAATTTCACGATCCTTATAAATATAATAGTATTGTCTAAAAACTAAAGAAGTTGAATGTCCCACAAACTTGGGGATTTGACAAAAAATGGGAAATCCAACTAAGGAAATTCTGGATCATTTAGTTCACGTGTTTCGGTTGACTTGATGGCTTTTTTATCATTGAAATTCGAGGAACTTAAGGTCTTCACCTTTAGTATGTCATTAATCAAATCACAAGGCTAGAATGAATAGCTTCCACTTCAACGTGTTGTAAGCTATTCAAACTTGGGTTCTCATTTGCCCTTGGCTTTAAATTATGTTTAACAACAATTTCTGGGAACTAATGTTTTATTGGAATAATTTTCTATTGTTTTTATAAGGACTGGTTCATATCGCTTGGGCATCTTGGCATATGAAGCTTTTTGAAATGTAGGATGTAATTTTGGCCTATGCTTTTGTTTAATGCCCTTTCATTCTTATATGATAGATTGGAAGGCTCGTGCTGATGTTGTGAAGCTTTTAAAGAATCTAAAGAAAGACTTAACTGTACTTGTCGTCAGCCATGATCTCAAGTTAGTCTCTGCTCTTTCACTCCCTCTTCCAGTTAAATAGATTTGCTACAAGCTCTTAATTCAACGTAGGCCATAGATTTGTTCTCTTTCTGTTAGCTATAGTAATGAAAAGCCGATGGGACATTTTTTTGTTAATTTGTTAAAATAATAATGATGTTTATGTAGCTTAAAAAAGTTATCTAGAACTATTCTCTCCTCATTAGTGTACCTTGAGGTTGTGCCCATATCCCGGTTGCAAGTTATTCTGGAATTTGAAATTTGTTAAGATTCAAGTTTATTGCTCCAAACCTAATGCAACTACAGTTTTGCTTCTACCAAACCAACATCTGGTAAAAGAAAATTGACACTGCCATTCTCTTGCACTGTATGTTTAACCTGTTCTGATCTCATTTGATAAAGGTGTTCATGTTCACTCATTAATTCTGTGTGCCTTTCAGAGAGTTTGCTGGCTTGGTTGACTATTCATGGAGAATGGAAATGGGCGGTGTTCTTAGAGAAGAAGCTCTGCCTGTTTAATTTGTAATTTTTGACTATGCGTTCATGCTGTGAGTATAATTTCCTGCTGCTATGGCTACTTTATTATTTTCTCTTGCTTCTTCCATTTCTGTTCACAAAAGCTTGCCACAGTCTGGCGACCAAGCTTGTGTTGGATTTTCTAAAATGAACCGTTCTTTATCTAGTCATGTAGATATGAGAACTAAAATTTGTCAGTTTACCAGGAGGAGAATATCCATGTTTATACGTATGGTTTGACATTTTTGTACAGTTTCAAAAAGATTCTTTCAGAAAAAGTGCCGTTGCATTACCTCTGGGAATAAATTCTCCTCATTTTGATGAAATCTTTTGTCTTGGCCTTGAATTTCCAGCATGGAATCAACCACAGCTGTGTACACAGGTGCAGTTTCATTCACGCTTTTGCGAGTCACTGCATCAACTCAAGGACCAAAACTGGTCGTAGATTCGCAAGGTTATGGTAACCAACCCATATTGAATTGCCTCTGTTTCTAATGGGGAATTTTTTGAATCGTTGTACATTCAATAATAGTATCAGAACTTTAAAACAACATATATGCCGTAACAATTTTGGACTTGAGTCTTTTTCCAAATCTTCAACTTACTAGACTTTGTTATTATTCATCTGCATTTTATTTTATATGAAATATTGTTTAGTTCAATTCCAACTGAACCGGGCGAGATCAACTCTTACACCCCTCTTCAAACGGGGCGTGATGTAGAGAAGCTCGAGTTTGTTGAACTCGTTCGCTCGATACCGACAATTGATATGATAATTCTTAAGAAC

mRNA sequence

AAATAATATCGTCCAGACCAATGTATCAAATCTCTCCACCCATGTGCATCTTCGAGTGAATTTGAGAAACAAAATCGGACAAATGATTCAGTTTGTGTGTTTACAAGCTAAGCTATTGGGAGATTATTGAAGCGAAGGTACATTAACTTCAAATTGGGGATTTTGACAAATTTTGATGCTTGAAAACGGCATTCAGCTTCAGCCCATTGGCCTGGCTCGTCGTCTCCGCTGAACGGATCCCATGGCCACCTTTGTTTCTGTTTCTAAGTTGTTCGTTGGCTGGAAACCAACCCCACTATCAAATTTACCTGCGCGCGACTCCTTCAGCAGTTCGAATTCCCTAAGAACCAATGCTCTCTCAGTGAAATCCGATTACTCTTGCTTTGAAGTTAGGGATTTAAGCTATCGACCTCCAGGGACCGAGCATTCTCTTCTGGACACAGTTAATTTTTCCCTTCGAGAGAAAAGTTTTGGGTTAATTTTTGGACAAAGTGGAAGTGGGAAAACTACTTTATTGCAGCTTCTTGCAGGTCTGAGCAAACCAACTTCAGGTTCCATTTATGTCCAAAAGTACGGTAAAGATGACAAACCATGTCAGTCTTCTCAACCGTTAACCACTGATAGGGTTGGCATTGTCTTTCAATTTCCAGAGAGGTACTTTGTTGCAGACAACGTGCTTGATGAAGTCACATTTGGGTGGCCGCGGCAAAAGAGTGATGTTTATTTGAAACAGGACCTTGCCTTGAGACTCCAAAGAGCAATTAATTGGGTGGGATTAAATGGCATACCCTTGGACAAAGATCCTCACTCTCTCAGTGGTGGCTACAAGCGCCGTCTTGCCTTGGCAATCCAATTGGTGCAGTTCCCAGATCTGTTATTACTGGATGAGCCTCTAGCTGGTCTTGATTGGAAGGCTCGTGCTGATGTTGTGAAGCTTTTAAAGAATCTAAAGAAAGACTTAACTGTACTTGTCGTCAGCCATGATCTCAAAGAGTTTGCTGGCTTGGTTGACTATTCATGGAGAATGGAAATGGGCGGTGTTCTTAGAGAAGAAGCTCTGCCTGTTTAATTTGTAATTTTTGACTATGCGTTCATGCTGTGAGTATAATTTCCTGCTGCTATGGCTACTTTATTATTTTCTCTTGCTTCTTCCATTTCTGTTCACAAAAGCTTGCCACAGTCTGGCGACCAAGCTTGTGTTGGATTTTCTAAAATGAACCGTTCTTTATCTAGTCATGTAGATATGAGAACTAAAATTTGTCAGTTTACCAGGAGGAGAATATCCATGTTTATACGTATGGTTTGACATTTTTGTACAGTTTCAAAAAGATTCTTTCAGAAAAAGTGCCGTTGCATTACCTCTGGGAATAAATTCTCCTCATTTTGATGAAATCTTTTGTCTTGGCCTTGAATTTCCAGCATGGAATCAACCACAGCTGTGTACACAGGTGCAGTTTCATTCACGCTTTTGCGAGTCACTGCATCAACTCAAGGACCAAAACTGGTCGTAGATTCGCAAGGTTATGGTAACCAACCCATATTGAATTGCCTCTGTTTCTAATGGGGAATTTTTTGAATCGTTGTACATTCAATAATAGTATCAGAACTTTAAAACAACATATATGCCGTAACAATTTTGGACTTGAGTCTTTTTCCAAATCTTCAACTTACTAGACTTTGTTATTATTCATCTGCATTTTATTTTATATGAAATATTGTTTAGTTCAATTCCAACTGAACCGGGCGAGATCAACTCTTACACCCCTCTTCAAACGGGGCGTGATGTAGAGAAGCTCGAGTTTGTTGAACTCGTTCGCTCGATACCGACAATTGATATGATAATTCTTAAGAAC

Coding sequence (CDS)

ATGGCCACCTTTGTTTCTGTTTCTAAGTTGTTCGTTGGCTGGAAACCAACCCCACTATCAAATTTACCTGCGCGCGACTCCTTCAGCAGTTCGAATTCCCTAAGAACCAATGCTCTCTCAGTGAAATCCGATTACTCTTGCTTTGAAGTTAGGGATTTAAGCTATCGACCTCCAGGGACCGAGCATTCTCTTCTGGACACAGTTAATTTTTCCCTTCGAGAGAAAAGTTTTGGGTTAATTTTTGGACAAAGTGGAAGTGGGAAAACTACTTTATTGCAGCTTCTTGCAGGTCTGAGCAAACCAACTTCAGGTTCCATTTATGTCCAAAAGTACGGTAAAGATGACAAACCATGTCAGTCTTCTCAACCGTTAACCACTGATAGGGTTGGCATTGTCTTTCAATTTCCAGAGAGGTACTTTGTTGCAGACAACGTGCTTGATGAAGTCACATTTGGGTGGCCGCGGCAAAAGAGTGATGTTTATTTGAAACAGGACCTTGCCTTGAGACTCCAAAGAGCAATTAATTGGGTGGGATTAAATGGCATACCCTTGGACAAAGATCCTCACTCTCTCAGTGGTGGCTACAAGCGCCGTCTTGCCTTGGCAATCCAATTGGTGCAGTTCCCAGATCTGTTATTACTGGATGAGCCTCTAGCTGGTCTTGATTGGAAGGCTCGTGCTGATGTTGTGAAGCTTTTAAAGAATCTAAAGAAAGACTTAACTGTACTTGTCGTCAGCCATGATCTCAAAGAGTTTGCTGGCTTGGTTGACTATTCATGGAGAATGGAAATGGGCGGTGTTCTTAGAGAAGAAGCTCTGCCTGTTTAA

Protein sequence

MATFVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGTEHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYGKDDKPCQSSQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLNGIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV

Homology

[Close]

BLAST of Carg24283 vs. NCBI nr
Match: KAG6578362.1 (ABC transporter I family member 11, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015946.1 ABC transporter I family member 11, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 556.2 bits (1432), Expect = 1.6e-154
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MATFVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT 60
           MATFVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT
Sbjct: 1   MATFVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT 60

Query: 61  EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYGKDDKPCQS 120
           EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYGKDDKPCQS
Sbjct: 61  EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYGKDDKPCQS 120

Query: 121 SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN 180
           SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN
Sbjct: 121 SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN 180

Query: 181 GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL 240
           GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL
Sbjct: 181 GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL 240

Query: 241 TVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV 276
           TVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV
Sbjct: 241 TVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV 275

[Close]

BLAST of Carg24283 vs. NCBI nr
Match: XP_022939933.1 (ABC transporter I family member 11, chloroplastic [Cucurbita moschata] >XP_022939934.1 ABC transporter I family member 11, chloroplastic [Cucurbita moschata])

HSP 1 Score: 555.1 bits (1429), Expect = 3.5e-154
Identity = 274/275 (99.64%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MATFVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT 60
           MATFVSVSKLFVGWKPTPLSNLPARDSF+SSNSLRTNALSVKSDYSCFEVRDLSYRPPGT
Sbjct: 1   MATFVSVSKLFVGWKPTPLSNLPARDSFNSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT 60

Query: 61  EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYGKDDKPCQS 120
           EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYGKDDKPCQS
Sbjct: 61  EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYGKDDKPCQS 120

Query: 121 SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN 180
           SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN
Sbjct: 121 SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN 180

Query: 181 GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL 240
           GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL
Sbjct: 181 GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL 240

Query: 241 TVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV 276
           TVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV
Sbjct: 241 TVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV 275

[Close]

BLAST of Carg24283 vs. NCBI nr
Match: XP_022992839.1 (ABC transporter I family member 11, chloroplastic isoform X1 [Cucurbita maxima] >XP_022992840.1 ABC transporter I family member 11, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 554.3 bits (1427), Expect = 5.9e-154
Identity = 273/275 (99.27%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MATFVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT 60
           MA+FVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT
Sbjct: 1   MASFVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT 60

Query: 61  EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYGKDDKPCQS 120
           EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGS+YVQKYGKDDKPCQS
Sbjct: 61  EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSVYVQKYGKDDKPCQS 120

Query: 121 SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN 180
           SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN
Sbjct: 121 SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN 180

Query: 181 GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL 240
           GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL
Sbjct: 181 GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL 240

Query: 241 TVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV 276
           TVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV
Sbjct: 241 TVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV 275

[Close]

BLAST of Carg24283 vs. NCBI nr
Match: XP_023550676.1 (ABC transporter I family member 11, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023550677.1 ABC transporter I family member 11, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 552.7 bits (1423), Expect = 1.7e-153
Identity = 273/275 (99.27%), Postives = 274/275 (99.64%), Query Frame = 0


Query: 1   MATFVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT 60
           MATFVSVSKLFVGWKPTPLSNLPARDSFSSS SLRTN+LSVKSDYSCFEVRDLSYRPPGT
Sbjct: 1   MATFVSVSKLFVGWKPTPLSNLPARDSFSSSTSLRTNSLSVKSDYSCFEVRDLSYRPPGT 60

Query: 61  EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYGKDDKPCQS 120
           EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYGKDDKPCQS
Sbjct: 61  EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYGKDDKPCQS 120

Query: 121 SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN 180
           SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN
Sbjct: 121 SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN 180

Query: 181 GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL 240
           GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL
Sbjct: 181 GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL 240

Query: 241 TVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV 276
           TVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV
Sbjct: 241 TVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV 275

[Close]

BLAST of Carg24283 vs. NCBI nr
Match: XP_022992841.1 (ABC transporter I family member 11, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 503.1 bits (1294), Expect = 1.6e-138
Identity = 249/255 (97.65%), Postives = 252/255 (98.82%), Query Frame = 0


Query: 1   MATFVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT 60
           MA+FVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT
Sbjct: 1   MASFVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT 60

Query: 61  EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYGKDDKPCQS 120
           EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGS+YVQKYGKDDKPCQS
Sbjct: 61  EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSVYVQKYGKDDKPCQS 120

Query: 121 SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN 180
           SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN
Sbjct: 121 SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN 180

Query: 181 GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL 240
           GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL
Sbjct: 181 GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL 240

Query: 241 TVLVVSHDLKEFAGL 256
           TVLVVSHDLK  + L
Sbjct: 241 TVLVVSHDLKLVSAL 255

[Close]

BLAST of Carg24283 vs. ExPASy Swiss-Prot
Match: Q8LEF6 (ABC transporter I family member 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ABCI11 PE=2 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 4.8e-98
Identity = 183/270 (67.78%), Postives = 208/270 (77.04%), Query Frame = 0


Query: 6   SVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGTEHSLL 65
           S S   +GWK       P R  F  +   R     +  DYSC EVRD+ YRPPGT+ ++L
Sbjct: 21  SFSSTAIGWKQ------PLR--FRRTKKPRV----ISCDYSCIEVRDVCYRPPGTQLNIL 80

Query: 66  DTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYGKDDKPCQSSQPLT 125
           + VNFSLREKSFGLIFG+SGSGKTTLLQLLAGL+KPTSGSI +Q YG D +P      L 
Sbjct: 81  NGVNFSLREKSFGLIFGKSGSGKTTLLQLLAGLNKPTSGSICIQGYGDDGQPKADPDLLP 140

Query: 126 TDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLNGIPLD 185
           T++VGIVFQFPER+FVADNVLDE+TFGWPRQK  + LK+ L   LQRA NWVGL+ IPLD
Sbjct: 141 TEKVGIVFQFPERFFVADNVLDEITFGWPRQKGSLQLKEQLTSNLQRAFNWVGLDSIPLD 200

Query: 186 KDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDLTVLVV 245
           KDP  LSGGYKRRLALAIQLVQ PDLL+LDEPLAGLDWKARADV KLLK+LKK+LT+LVV
Sbjct: 201 KDPQLLSGGYKRRLALAIQLVQTPDLLILDEPLAGLDWKARADVAKLLKHLKKELTLLVV 260

Query: 246 SHDLKEFAGLVDYSWRMEMGGVLREEALPV 276
           SHDL+E A LVD SWRME GGVL  E  P+
Sbjct: 261 SHDLRELAALVDQSWRMETGGVLVAERPPL 278

[Close]

BLAST of Carg24283 vs. ExPASy Swiss-Prot
Match: A3DJK5 (Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Hungateiclostridium thermocellum (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=ecfA2 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 5.4e-33
Identity = 86/216 (39.81%), Postives = 129/216 (59.72%), Query Frame = 0


Query: 61  EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYGKDDKPCQS 120
           E   LD +N S+    F  I G +GSGK+TL+Q   GL KPTSGS+Y+     ++   Q 
Sbjct: 19  EKKALDNINLSIETGEFVGIIGHTGSGKSTLVQHFNGLLKPTSGSVYI---NGEELTGQR 78

Query: 121 SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN 180
           ++ L   +VGIVFQ+PE     + V  ++ FG  R+  +   K ++  ++++ I  VGL+
Sbjct: 79  AKEL-KKQVGIVFQYPEHQLFEETVYKDIAFGLVRRGEE---KDEIYRKVRKTIRLVGLS 138

Query: 181 GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKD- 240
              LDK P  LSGG KRR+A+A  LV  P +L+LDEP AGLD K R ++ +L+ NL K+ 
Sbjct: 139 EDILDKSPFELSGGQKRRVAMAGILVLEPSILVLDEPAAGLDPKGREEIFELVSNLHKNN 198

Query: 241 -LTVLVVSHDLKEFAG-----LVDYSWRMEMGGVLR 270
            +TV++VSH +++ A      +V    R+EM G +R
Sbjct: 199 KMTVILVSHSMEDVAKYVQRVIVMNQGRIEMCGPVR 227

[Close]

BLAST of Carg24283 vs. ExPASy Swiss-Prot
Match: Q97EK9 (Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=ecfA2 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.2e-32
Identity = 85/233 (36.48%), Postives = 136/233 (58.37%), Query Frame = 0


Query: 49  EVRDLSYR-PPGT--EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGS 108
           ++ +L+Y   PGT  E   LD VN ++ +  F +  G +GSGK+TL+Q + GL KPTSGS
Sbjct: 4   KIENLTYTYMPGTPFEKKALDNVNITIEDGEFAVFIGHTGSGKSTLIQQINGLLKPTSGS 63

Query: 109 IYVQKYGKDDKPCQSSQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQD 168
           I++      DK  + +      +VG+VFQ+PE     + +  ++ FG PR       +++
Sbjct: 64  IFIDDVDITDKSVKLND--IRKKVGLVFQYPEYQLFEETIEKDIAFG-PRNMG--LSEEE 123

Query: 169 LALRLQRAINWVGLNGIPL-DKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWK 228
           ++ R+++A+  VGL      DK P  LSGG KRR+A+A  +   P +L+LDEP AGLD K
Sbjct: 124 VSTRVKKAMKMVGLEYNDFKDKSPFELSGGQKRRVAIAGVVAMEPKVLILDEPTAGLDPK 183

Query: 229 ARADVVKLLKNLKKD--LTVLVVSHDLKEFAGLVD-----YSWRMEMGGVLRE 271
            R D++  +K L+K+  +T+++VSH +++ A + D     Y  R  + G L E
Sbjct: 184 GRDDILYEIKKLQKEYKMTIILVSHSMEDVAKVADKIFVMYDSRCILSGNLDE 231

[Close]

BLAST of Carg24283 vs. ExPASy Swiss-Prot
Match: Q3JYF5 (Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Streptococcus agalactiae serotype Ia (strain ATCC 27591 / A909 / CDC SS700) OX=205921 GN=ecfA2 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.3e-30
Identity = 83/224 (37.05%), Postives = 122/224 (54.46%), Query Frame = 0


Query: 49  EVRDLSYR-PPGT--EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGS 108
           E +++SY    GT  E   L  VN  + + S+    G +GSGK+T++QLL GL  PT G 
Sbjct: 4   EFKNVSYTYQAGTPFEGRALFDVNLKIEDASYTAFIGHTGSGKSTIMQLLNGLHIPTKGE 63

Query: 109 IYVQKYGKDDKPCQSSQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQD 168
           + V  +                +VG+VFQFPE     + VL +V FG      +  + Q 
Sbjct: 64  VIVDDFSIKAGDKNKEIKFIRQKVGLVFQFPESQLFEETVLKDVAFG----PQNFGISQI 123

Query: 169 LALRL-QRAINWVGLNGIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWK 228
            A RL +  +  VG++    DK+P  LSGG  RR+A+A  L   P +L+LDEP AGLD K
Sbjct: 124 EAERLAEEKLRLVGISEDLFDKNPFELSGGQMRRVAIAGILAMEPKVLVLDEPTAGLDPK 183

Query: 229 ARADVVKLLKNL-KKDLTVLVVSHDLKEFAGLVDYSWRMEMGGV 268
            R +++ L KNL KK +T+++V+H + + A   DY + +E G V
Sbjct: 184 GRKELMTLFKNLHKKGMTIVLVTHLMDDVADYADYVYVLEAGKV 223

[Close]

BLAST of Carg24283 vs. ExPASy Swiss-Prot
Match: Q8E2L3 (Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Streptococcus agalactiae serotype III (strain NEM316) OX=211110 GN=ecfA2 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.3e-30
Identity = 83/224 (37.05%), Postives = 122/224 (54.46%), Query Frame = 0


Query: 49  EVRDLSYR-PPGT--EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGS 108
           E +++SY    GT  E   L  VN  + + S+    G +GSGK+T++QLL GL  PT G 
Sbjct: 4   EFKNVSYTYQAGTPFEGRALFDVNLKIEDASYTAFIGHTGSGKSTIMQLLNGLHIPTKGE 63

Query: 109 IYVQKYGKDDKPCQSSQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQD 168
           + V  +                +VG+VFQFPE     + VL +V FG      +  + Q 
Sbjct: 64  VIVDDFSIKAGDKNKEIKFIRQKVGLVFQFPESQLFEETVLKDVAFG----PQNFGISQI 123

Query: 169 LALRL-QRAINWVGLNGIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWK 228
            A RL +  +  VG++    DK+P  LSGG  RR+A+A  L   P +L+LDEP AGLD K
Sbjct: 124 EAERLAEEKLRLVGISEDLFDKNPFELSGGQMRRVAIAGILAMEPKVLVLDEPTAGLDPK 183

Query: 229 ARADVVKLLKNL-KKDLTVLVVSHDLKEFAGLVDYSWRMEMGGV 268
            R +++ L KNL KK +T+++V+H + + A   DY + +E G V
Sbjct: 184 GRKELMTLFKNLHKKGMTIVLVTHLMDDVADYADYVYVLEAGKV 223

[Close]

BLAST of Carg24283 vs. ExPASy TrEMBL
Match: A0A6J1FMX1 (ABC transporter I family member 11, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111445651 PE=4 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 1.7e-154
Identity = 274/275 (99.64%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MATFVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT 60
           MATFVSVSKLFVGWKPTPLSNLPARDSF+SSNSLRTNALSVKSDYSCFEVRDLSYRPPGT
Sbjct: 1   MATFVSVSKLFVGWKPTPLSNLPARDSFNSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT 60

Query: 61  EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYGKDDKPCQS 120
           EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYGKDDKPCQS
Sbjct: 61  EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYGKDDKPCQS 120

Query: 121 SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN 180
           SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN
Sbjct: 121 SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN 180

Query: 181 GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL 240
           GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL
Sbjct: 181 GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL 240

Query: 241 TVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV 276
           TVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV
Sbjct: 241 TVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV 275

[Close]

BLAST of Carg24283 vs. ExPASy TrEMBL
Match: A0A6J1JWU1 (ABC transporter I family member 11, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489049 PE=4 SV=1)

HSP 1 Score: 554.3 bits (1427), Expect = 2.9e-154
Identity = 273/275 (99.27%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MATFVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT 60
           MA+FVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT
Sbjct: 1   MASFVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT 60

Query: 61  EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYGKDDKPCQS 120
           EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGS+YVQKYGKDDKPCQS
Sbjct: 61  EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSVYVQKYGKDDKPCQS 120

Query: 121 SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN 180
           SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN
Sbjct: 121 SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN 180

Query: 181 GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL 240
           GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL
Sbjct: 181 GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL 240

Query: 241 TVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV 276
           TVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV
Sbjct: 241 TVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV 275

[Close]

BLAST of Carg24283 vs. ExPASy TrEMBL
Match: A0A6J1JUM5 (ABC transporter I family member 11, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489049 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 7.6e-139
Identity = 249/255 (97.65%), Postives = 252/255 (98.82%), Query Frame = 0


Query: 1   MATFVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT 60
           MA+FVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT
Sbjct: 1   MASFVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT 60

Query: 61  EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYGKDDKPCQS 120
           EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGS+YVQKYGKDDKPCQS
Sbjct: 61  EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSVYVQKYGKDDKPCQS 120

Query: 121 SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN 180
           SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN
Sbjct: 121 SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN 180

Query: 181 GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL 240
           GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL
Sbjct: 181 GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL 240

Query: 241 TVLVVSHDLKEFAGL 256
           TVLVVSHDLK  + L
Sbjct: 241 TVLVVSHDLKLVSAL 255

[Close]

BLAST of Carg24283 vs. ExPASy TrEMBL
Match: A0A0A0LMK4 (ABC transporter domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G405060 PE=4 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 7.9e-128
Identity = 233/275 (84.73%), Postives = 250/275 (90.91%), Query Frame = 0


Query: 1   MATFVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT 60
           MA+FVSVS  F+   P P S LPA  SF SSNS RTNAL++KS+YSCFEVRDLSYRPPGT
Sbjct: 1   MASFVSVSNFFITRNPIPQSYLPAPHSF-SSNSRRTNALTLKSNYSCFEVRDLSYRPPGT 60

Query: 61  EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYGKDDKPCQS 120
           EHSLL+ VNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSI VQKY KD KPCQS
Sbjct: 61  EHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSICVQKYDKDGKPCQS 120

Query: 121 SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN 180
           SQPLT +RVGIVFQFPERYF+ D+VL+EVTFGWPRQ+SD  LK++LALRLQRAINWVGLN
Sbjct: 121 SQPLTPERVGIVFQFPERYFITDSVLNEVTFGWPRQRSDSDLKENLALRLQRAINWVGLN 180

Query: 181 GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL 240
           GI LDKDPHSLSGGYKRRLALAIQLVQ PDLL+LDEPLAGLDWKAR DVVKLLKNLKK+L
Sbjct: 181 GIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARTDVVKLLKNLKKEL 240

Query: 241 TVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV 276
           TVL+VSHDLKEFAGLVD SWRMEMGGVLREE LP+
Sbjct: 241 TVLIVSHDLKEFAGLVDNSWRMEMGGVLREEPLPI 274

[Close]

BLAST of Carg24283 vs. ExPASy TrEMBL
Match: A0A6J1BYE6 (ABC transporter I family member 11, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006715 PE=4 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 7.9e-128
Identity = 233/275 (84.73%), Postives = 245/275 (89.09%), Query Frame = 0


Query: 1   MATFVSVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGT 60
           MA+ VS S  F GWKP P   + +RDS  S N  R  AL VKSDYSCFEVRDLSYRPPGT
Sbjct: 1   MASCVSGSNFFTGWKPIPQLEVVSRDSV-SLNFRRIKALKVKSDYSCFEVRDLSYRPPGT 60

Query: 61  EHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYGKDDKPCQS 120
           E +LLD VNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIY QKY K+ KPCQS
Sbjct: 61  ELALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQKYDKEGKPCQS 120

Query: 121 SQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLN 180
           SQPL+ +RVGIVFQFPERYFV D+VLDEVTFGWPRQK D +LK+ LALRLQRAINWVGLN
Sbjct: 121 SQPLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALRLQRAINWVGLN 180

Query: 181 GIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDL 240
           GI LDKDPHSLSGGYKRRLALAIQLVQ PDLLLLDEPLAGLDWKARAD+VKLLKNLKKDL
Sbjct: 181 GIALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKARADIVKLLKNLKKDL 240

Query: 241 TVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV 276
           TVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALP+
Sbjct: 241 TVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPI 274

[Close]

BLAST of Carg24283 vs. TAIR 10
Match: AT5G14100.1 (non-intrinsic ABC protein 14 )

HSP 1 Score: 359.0 bits (920), Expect = 3.4e-99
Identity = 183/270 (67.78%), Postives = 208/270 (77.04%), Query Frame = 0


Query: 6   SVSKLFVGWKPTPLSNLPARDSFSSSNSLRTNALSVKSDYSCFEVRDLSYRPPGTEHSLL 65
           S S   +GWK       P R  F  +   R     +  DYSC EVRD+ YRPPGT+ ++L
Sbjct: 21  SFSSTAIGWKQ------PLR--FRRTKKPRV----ISCDYSCIEVRDVCYRPPGTQLNIL 80

Query: 66  DTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYGKDDKPCQSSQPLT 125
           + VNFSLREKSFGLIFG+SGSGKTTLLQLLAGL+KPTSGSI +Q YG D +P      L 
Sbjct: 81  NGVNFSLREKSFGLIFGKSGSGKTTLLQLLAGLNKPTSGSICIQGYGDDGQPKADPDLLP 140

Query: 126 TDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLNGIPLD 185
           T++VGIVFQFPER+FVADNVLDE+TFGWPRQK  + LK+ L   LQRA NWVGL+ IPLD
Sbjct: 141 TEKVGIVFQFPERFFVADNVLDEITFGWPRQKGSLQLKEQLTSNLQRAFNWVGLDSIPLD 200

Query: 186 KDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDLTVLVV 245
           KDP  LSGGYKRRLALAIQLVQ PDLL+LDEPLAGLDWKARADV KLLK+LKK+LT+LVV
Sbjct: 201 KDPQLLSGGYKRRLALAIQLVQTPDLLILDEPLAGLDWKARADVAKLLKHLKKELTLLVV 260

Query: 246 SHDLKEFAGLVDYSWRMEMGGVLREEALPV 276
           SHDL+E A LVD SWRME GGVL  E  P+
Sbjct: 261 SHDLRELAALVDQSWRMETGGVLVAERPPL 278

[Close]

BLAST of Carg24283 vs. TAIR 10
Match: AT4G33460.1 (ABC transporter family protein )

HSP 1 Score: 89.4 bits (220), Expect = 5.0e-18
Identity = 75/257 (29.18%), Postives = 127/257 (49.42%), Query Frame = 0


Query: 18  PLSNLPARDSFSSSNSLR-TNALSVKSDYSCFEVRDLSYRPPGTEHSLLDTVNFSLREKS 77
           PL ++ +  S S S  ++ ++ ++V+    CF V        G    +L   +F +    
Sbjct: 16  PLRSISSSVSPSGSYRIKFSDNVAVECRNLCFSVSTRQ----GISVPILRDCSFRIPSGQ 75

Query: 78  FGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYGKDDKPCQSSQPLTTDRVGIVFQFP 137
             +I G +G GK+TLL++LAG+  P+SG+++V+K                     VFQ P
Sbjct: 76  LWMILGPNGCGKSTLLKILAGVVNPSSGTVFVEK-----------------PKNFVFQNP 135

Query: 138 ERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLNGIPLDKDPHSLSGGYK 197
           +   V   V  +V FG  +       ++++  R+ +A+  VG+    + +   +LSGG K
Sbjct: 136 DHQVVMPTVEADVAFGLGKYHD--MNQEEVKSRVIKALEAVGMRDY-MQRPIQTLSGGQK 195

Query: 198 RRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNL----KKDLTVLVVSHDLKEF 257
           +R+A+A  L +   +LLLDE    LD   +  V+K +K+L    K D+T L V+H L+E 
Sbjct: 196 QRIAIAGALAEACKVLLLDELTTFLDESDQMGVIKAVKDLINAKKGDVTALWVTHRLEEL 247

Query: 258 AGLVDYSWRMEMGGVLR 270
               D +  ME G V+R
Sbjct: 256 K-YADGAVYMENGRVVR 247

[Close]

BLAST of Carg24283 vs. TAIR 10
Match: AT5G03910.1 (ABC2 homolog 12 )

HSP 1 Score: 83.2 bits (204), Expect = 3.6e-16
Identity = 68/224 (30.36%), Postives = 112/224 (50.00%), Query Frame = 0


Query: 35  RTNALSVKSDYSCFEVRDLSYRPPGTEHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQL 94
           R  A+ ++      E+ D+S++       +LD +N  ++      + G SG GKTTL++L
Sbjct: 383 RPEAIQLEKVAGEVELCDISFKYDENMLPVLDGLNLHIKAGETVALVGPSGGGKTTLIKL 442

Query: 95  LAGLSKPTSGSIYVQKYGKDDKPCQSSQPLTTDRVGIVFQFPERY--FVADNV-LDEVTF 154
           L  L +P+SGSI + K    D   +S +      VG+V Q    +   +ADN+   ++T 
Sbjct: 443 LLRLYEPSSGSIIIDKIDIKDIKLESLR----KHVGLVSQDTTLFSGTIADNIGYRDLTT 502

Query: 155 GWPRQKSDVYLKQDLALRLQRAI-----NWVGLNGIPLDKDPHSLSGGYKRRLALAIQLV 214
           G   ++ ++  K   A    R +       VG  G        SLSGG K+RLA+A  L 
Sbjct: 503 GIDMKRVELAAKTANADEFIRNLPEGYNTGVGPRG-------SSLSGGQKQRLAIARALY 562

Query: 215 QFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDLTVLVVSHDLK 251
           Q   +L+LDE  + LD  +   V + L+ + +D TV+V++H L+
Sbjct: 563 QKSSILILDEATSALDSLSELLVREALERVMQDHTVIVIAHRLE 595

[Close]

BLAST of Carg24283 vs. TAIR 10
Match: AT3G47740.1 (ABC2 homolog 2 )

HSP 1 Score: 82.0 bits (201), Expect = 8.0e-16
Identity = 57/181 (31.49%), Postives = 97/181 (53.59%), Query Frame = 0


Query: 77  FGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQKYGKDDKPCQSSQPLTTDRVGIVFQFP 136
           FG++ G +G+GKT+ + ++ GL KPTSG+ +VQ  G D   C+    + T  +G+  Q  
Sbjct: 644 FGML-GPNGAGKTSFINMMTGLVKPTSGAAFVQ--GLD--ICKDMDRVYTS-MGVCPQHD 703

Query: 137 ERYFVADNVLDEVTFGWPRQKSDVYLKQDLALRLQRAINWVGLNGIPLDKDPHSLSGGYK 196
             +         + +G  +    V L Q +   L R++N    +G   DK     SGG K
Sbjct: 704 LLWETLTGREHLLFYGRLKNLKGVDLNQAVEESL-RSVNL--FHGGVADKPAGKYSGGMK 763

Query: 197 RRLALAIQLVQFPDLLLLDEPLAGLDWKARADVVKLLKNLKKDLTVLVVSHDLKEFAGLV 256
           RRL++AI L+  P ++ +DEP  GLD  +R ++  ++KN K+   +++ +H ++E   L 
Sbjct: 764 RRLSVAISLIGNPKVVYMDEPSTGLDPASRKNLWTVIKNAKRHTAIILTTHSMEEAEFLC 815

Query: 257 D 258
           D
Sbjct: 824 D 815

[Close]

BLAST of Carg24283 vs. TAIR 10
Match: AT1G27940.1 (P-glycoprotein 13 )

HSP 1 Score: 76.3 bits (186), Expect = 4.4e-14
Identity = 54/203 (26.60%), Postives = 99/203 (48.77%), Query Frame = 0


Query: 49  EVRDLSYRPPGTEHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYV 108
           E + +S+  P   + + + ++F++R        G SGSGK+T++ ++    +P SG I +
Sbjct: 373 EFQKVSFAYPSRPNMVFENLSFTIRSGKTFAFVGPSGSGKSTIISMVQRFYEPNSGEILL 432

Query: 109 QKYGKDDKPCQSSQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLAL 168
              G D K  +       +++G+V Q P  +  A  +   +  G      D  ++   A 
Sbjct: 433 D--GNDIKSLKLK--WFREQLGLVSQEPALF--ATTIASNILLGKENANMDQIIEAAKAA 492

Query: 169 RLQRAINWV--GLNGIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKAR 228
                I  +  G N   + +    LSGG K+R+A+A  +++ P +LLLDE  + LD ++ 
Sbjct: 493 NADSFIKSLPNGYN-TQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESE 552

Query: 229 ADVVKLLKNLKKDLTVLVVSHDL 250
             V + L N+ +  T +VV+H L
Sbjct: 553 KIVQQALDNVMEKRTTIVVAHRL 568

The following BLAST results are available for this feature:

BLAST of Carg24283 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6578362.1	1.6e-154	100.00	ABC transporter I family member 11, chloroplastic, partial [Cucurbita argyrosper...	[more]
XP_022939933.1	3.5e-154	99.64	ABC transporter I family member 11, chloroplastic [Cucurbita moschata] >XP_02293...	[more]
XP_022992839.1	5.9e-154	99.27	ABC transporter I family member 11, chloroplastic isoform X1 [Cucurbita maxima] ...	[more]
XP_023550676.1	1.7e-153	99.27	ABC transporter I family member 11, chloroplastic [Cucurbita pepo subsp. pepo] >...	[more]
XP_022992841.1	1.6e-138	97.65	ABC transporter I family member 11, chloroplastic isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg24283 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LEF6	4.8e-98	67.78	ABC transporter I family member 11, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]
A3DJK5	5.4e-33	39.81	Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Hungateiclostrid...	[more]
Q97EK9	1.2e-32	36.48	Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Clostridium acet...	[more]
Q3JYF5	4.3e-30	37.05	Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Streptococcus ag...	[more]
Q8E2L3	4.3e-30	37.05	Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Streptococcus ag...	[more]

BLAST of Carg24283 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FMX1	1.7e-154	99.64	ABC transporter I family member 11, chloroplastic OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1JWU1	2.9e-154	99.27	ABC transporter I family member 11, chloroplastic isoform X1 OS=Cucurbita maxima...	[more]
A0A6J1JUM5	7.6e-139	97.65	ABC transporter I family member 11, chloroplastic isoform X2 OS=Cucurbita maxima...	[more]
A0A0A0LMK4	7.9e-128	84.73	ABC transporter domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G40...	[more]
A0A6J1BYE6	7.9e-128	84.73	ABC transporter I family member 11, chloroplastic isoform X1 OS=Momordica charan...	[more]

BLAST of Carg24283 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14100.1	3.4e-99	67.78	non-intrinsic ABC protein 14	[more]
AT4G33460.1	5.0e-18	29.18	ABC transporter family protein	[more]
AT5G03910.1	3.6e-16	30.36	ABC2 homolog 12	[more]
AT3G47740.1	8.0e-16	31.49	ABC2 homolog 2	[more]
AT1G27940.1	4.4e-14	26.60	P-glycoprotein 13	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 74..266 e-value: 5.3E-7 score: 39.3
IPR003439	ABC transporter-like, ATP-binding domain	PFAM	PF00005	ABC_tran	coord: 65..218 e-value: 9.3E-24 score: 84.5
IPR003439	ABC transporter-like, ATP-binding domain	PROSITE	PS50893	ABC_TRANSPORTER_2	coord: 48..275 score: 17.65386
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 31..273 e-value: 3.3E-52 score: 179.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 47..268
None	No IPR available	PANTHER	PTHR43553	HEAVY METAL TRANSPORTER	coord: 33..272
None	No IPR available	PANTHER	PTHR43553:SF1	ABC TRANSPORTER I FAMILY MEMBER 11, CHLOROPLASTIC	coord: 33..272
IPR015856	ABC transporter, CbiO/EcfA subunit	CDD	cd03225	ABC_cobalt_CbiO_domain1	coord: 49..265 e-value: 6.40534E-47 score: 154.162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24283-RA	Carg24283-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0055076	transition metal ion homeostasis
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0042626	ATPase-coupled transmembrane transporter activity
molecular_function	GO:0005524	ATP binding