Carg24278 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24278
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ribonucleoside-diphosphate reductase small chain-like
Location	Carg_Chr15: 487832 .. 488821 (-)
RNA-Seq Expression	Carg24278
Synteny	Carg24278

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTGCAATTTCAGAGGAGCCGTTGCTCGCCCCGAACCCCGATAGATTCTGTATGTTCCCCATTGAATATCCTCAGATTTGGGAAATGTATAAGAAAGCCGTTGCCTCCTTCTGGACCGCCGAGGAGGTTGATCTCTCTCAGGATCTTCGTCATTGGGAAGCTCTCACCGCCGATGAGAAGCATTTCATCAAACATGTTCTGGCCTTCTTTGCCGCTTCCGATGGTATTGTTCTGGAGAATCTCGCCGGCCGGTTCATGAAGGAGGTTCAGGTTGCGGAGGCGAGGGCGTTCTACGGCTTCCAAATAGCAATTGAGAATATTCACTCCGAGATGTACAGTTTGTTGCTCGAAACCTACATCAAGGACTCTGTCGAAAAGAACAGGTTGTTCCATGCCATGGAGACTGTACCTTGCGTCACGAAGAAGGCCGAGTGGGCGCTCAATTGGATCGACGGATCCGAGTCCTTTGCAGAGCGGTTGATAGCATTCGCCTGCGTGGAAGGCATCTTCTTCTCCGGAAGTTTCTGCGCTATATTCTGGTTGAAGAAACGCGGGCTAATGCCTGGATTGACATTTTCGAACGAATTGATATCTCGAGACGAAGGCCTGCACTGCGATTTCGCGTGCTTGCTATACTCGCTGATGAGGAAGAAGCTAAGCGAGGAGAAAGTGCAGGGGATCGTCCGGGAGGCAGTGGATATTGAGAGGGAATTCGTTTGTGAGGCATTGCCGTGCGCGCTGGTGGGTATGAATGGCGATCTGATGAGTGAGTACATCGAGTTTGTGGCAGATCGGCTGCTGGTAGCCCTAGGGCACAGCAAGATTTACAATGCGCAGAACCCGTTCGATTGGATGGAACTGATATCGCTGCAGGGGAAAACAAACTTCTTCGAGAAGAGGGTGGGAGATTATCAGAAGGCATCTGTGATGTCGAGCTTGGATGGGATCGGAGGGATACATGAGTTCAAGATGGATGAGGATTTTTAG

mRNA sequence

ATGCCTGCAATTTCAGAGGAGCCGTTGCTCGCCCCGAACCCCGATAGATTCTGTATGTTCCCCATTGAATATCCTCAGATTTGGGAAATGTATAAGAAAGCCGTTGCCTCCTTCTGGACCGCCGAGGAGGTTGATCTCTCTCAGGATCTTCGTCATTGGGAAGCTCTCACCGCCGATGAGAAGCATTTCATCAAACATGTTCTGGCCTTCTTTGCCGCTTCCGATGGTATTGTTCTGGAGAATCTCGCCGGCCGGTTCATGAAGGAGGTTCAGGTTGCGGAGGCGAGGGCGTTCTACGGCTTCCAAATAGCAATTGAGAATATTCACTCCGAGATGTACAGTTTGTTGCTCGAAACCTACATCAAGGACTCTGTCGAAAAGAACAGGTTGTTCCATGCCATGGAGACTGTACCTTGCGTCACGAAGAAGGCCGAGTGGGCGCTCAATTGGATCGACGGATCCGAGTCCTTTGCAGAGCGGTTGATAGCATTCGCCTGCGTGGAAGGCATCTTCTTCTCCGGAAGTTTCTGCGCTATATTCTGGTTGAAGAAACGCGGGCTAATGCCTGGATTGACATTTTCGAACGAATTGATATCTCGAGACGAAGGCCTGCACTGCGATTTCGCGTGCTTGCTATACTCGCTGATGAGGAAGAAGCTAAGCGAGGAGAAAGTGCAGGGGATCGTCCGGGAGGCAGTGGATATTGAGAGGGAATTCGTTTGTGAGGCATTGCCGTGCGCGCTGGTGGGTATGAATGGCGATCTGATGAGTGAGTACATCGAGTTTGTGGCAGATCGGCTGCTGGTAGCCCTAGGGCACAGCAAGATTTACAATGCGCAGAACCCGTTCGATTGGATGGAACTGATATCGCTGCAGGGGAAAACAAACTTCTTCGAGAAGAGGGTGGGAGATTATCAGAAGGCATCTGTGATGTCGAGCTTGGATGGGATCGGAGGGATACATGAGTTCAAGATGGATGAGGATTTTTAG

Coding sequence (CDS)

ATGCCTGCAATTTCAGAGGAGCCGTTGCTCGCCCCGAACCCCGATAGATTCTGTATGTTCCCCATTGAATATCCTCAGATTTGGGAAATGTATAAGAAAGCCGTTGCCTCCTTCTGGACCGCCGAGGAGGTTGATCTCTCTCAGGATCTTCGTCATTGGGAAGCTCTCACCGCCGATGAGAAGCATTTCATCAAACATGTTCTGGCCTTCTTTGCCGCTTCCGATGGTATTGTTCTGGAGAATCTCGCCGGCCGGTTCATGAAGGAGGTTCAGGTTGCGGAGGCGAGGGCGTTCTACGGCTTCCAAATAGCAATTGAGAATATTCACTCCGAGATGTACAGTTTGTTGCTCGAAACCTACATCAAGGACTCTGTCGAAAAGAACAGGTTGTTCCATGCCATGGAGACTGTACCTTGCGTCACGAAGAAGGCCGAGTGGGCGCTCAATTGGATCGACGGATCCGAGTCCTTTGCAGAGCGGTTGATAGCATTCGCCTGCGTGGAAGGCATCTTCTTCTCCGGAAGTTTCTGCGCTATATTCTGGTTGAAGAAACGCGGGCTAATGCCTGGATTGACATTTTCGAACGAATTGATATCTCGAGACGAAGGCCTGCACTGCGATTTCGCGTGCTTGCTATACTCGCTGATGAGGAAGAAGCTAAGCGAGGAGAAAGTGCAGGGGATCGTCCGGGAGGCAGTGGATATTGAGAGGGAATTCGTTTGTGAGGCATTGCCGTGCGCGCTGGTGGGTATGAATGGCGATCTGATGAGTGAGTACATCGAGTTTGTGGCAGATCGGCTGCTGGTAGCCCTAGGGCACAGCAAGATTTACAATGCGCAGAACCCGTTCGATTGGATGGAACTGATATCGCTGCAGGGGAAAACAAACTTCTTCGAGAAGAGGGTGGGAGATTATCAGAAGGCATCTGTGATGTCGAGCTTGGATGGGATCGGAGGGATACATGAGTTCAAGATGGATGAGGATTTTTAG

Protein sequence

MPAISEEPLLAPNPDRFCMFPIEYPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADEKHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSVEKNRLFHAMETVPCVTKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFVCEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNAQNPFDWMELISLQGKTNFFEKRVGDYQKASVMSSLDGIGGIHEFKMDEDF

Homology

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BLAST of Carg24278 vs. NCBI nr
Match: KAG6578369.1 (hypothetical protein SDJN03_22817, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015951.1 hypothetical protein SDJN02_21055, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 674.9 bits (1740), Expect = 3.6e-190
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0


Query: 1   MPAISEEPLLAPNPDRFCMFPIEYPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADE 60
           MPAISEEPLLAPNPDRFCMFPIEYPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADE
Sbjct: 1   MPAISEEPLLAPNPDRFCMFPIEYPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADE 60

Query: 61  KHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           KHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSVEKNRLFHAMETVPCVTKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAIF 180
           IKDSVEKNRLFHAMETVPCVTKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAIF
Sbjct: 121 IKDSVEKNRLFHAMETVPCVTKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFV 240

Query: 241 CEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNAQNPFDWMELISLQGKTNFFEK 300
           CEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNAQNPFDWMELISLQGKTNFFEK
Sbjct: 241 CEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNAQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGDYQKASVMSSLDGIGGIHEFKMDEDF 330
           RVGDYQKASVMSSLDGIGGIHEFKMDEDF
Sbjct: 301 RVGDYQKASVMSSLDGIGGIHEFKMDEDF 329

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BLAST of Carg24278 vs. NCBI nr
Match: XP_023550668.1 (ribonucleoside-diphosphate reductase small chain-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 671.4 bits (1731), Expect = 4.0e-189
Identity = 326/329 (99.09%), Postives = 328/329 (99.70%), Query Frame = 0


Query: 1   MPAISEEPLLAPNPDRFCMFPIEYPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADE 60
           MPAISEEPLLAPNPDRFCMFPIEYPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADE
Sbjct: 1   MPAISEEPLLAPNPDRFCMFPIEYPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADE 60

Query: 61  KHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           KHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSVEKNRLFHAMETVPCVTKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAIF 180
           IKDSVEKNRLFHA+ETVPC+TKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAIF
Sbjct: 121 IKDSVEKNRLFHAIETVPCITKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFV 240

Query: 241 CEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNAQNPFDWMELISLQGKTNFFEK 300
           CEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYN QNPFDWMELISLQGKTNFFEK
Sbjct: 241 CEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNVQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGDYQKASVMSSLDGIGGIHEFKMDEDF 330
           RVGDYQKASVMSSLDGIGGIHEFKMDEDF
Sbjct: 301 RVGDYQKASVMSSLDGIGGIHEFKMDEDF 329

[Close]

BLAST of Carg24278 vs. NCBI nr
Match: XP_022993124.1 (ribonucleoside-diphosphate reductase small chain-like [Cucurbita maxima])

HSP 1 Score: 670.2 bits (1728), Expect = 8.9e-189
Identity = 325/329 (98.78%), Postives = 328/329 (99.70%), Query Frame = 0


Query: 1   MPAISEEPLLAPNPDRFCMFPIEYPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADE 60
           MPAISEEPLLAPNPDRFCMFPI+YPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADE
Sbjct: 1   MPAISEEPLLAPNPDRFCMFPIQYPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADE 60

Query: 61  KHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           KHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSVEKNRLFHAMETVPCVTKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAIF 180
           IKDSVEKNRLFHAMETVPC+TKKAEWALNWIDGS+SFAERLIAFACVEGIFFSGSFCAIF
Sbjct: 121 IKDSVEKNRLFHAMETVPCITKKAEWALNWIDGSKSFAERLIAFACVEGIFFSGSFCAIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFV 240

Query: 241 CEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNAQNPFDWMELISLQGKTNFFEK 300
           CEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYN QNPFDWMELISLQGKTNFFEK
Sbjct: 241 CEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNVQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGDYQKASVMSSLDGIGGIHEFKMDEDF 330
           RVGDYQKASVMSSLDGIGGIHEFKMDEDF
Sbjct: 301 RVGDYQKASVMSSLDGIGGIHEFKMDEDF 329

[Close]

BLAST of Carg24278 vs. NCBI nr
Match: XP_022939079.1 (ribonucleoside-diphosphate reductase small chain-like [Cucurbita moschata])

HSP 1 Score: 667.2 bits (1720), Expect = 7.5e-188
Identity = 324/329 (98.48%), Postives = 327/329 (99.39%), Query Frame = 0


Query: 1   MPAISEEPLLAPNPDRFCMFPIEYPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADE 60
           MPAISEEPLLAPNPDRFCMFPI+YPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADE
Sbjct: 85  MPAISEEPLLAPNPDRFCMFPIQYPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADE 144

Query: 61  KHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           KHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 145 KHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 204

Query: 121 IKDSVEKNRLFHAMETVPCVTKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAIF 180
           IK SVEKNRLFHA+ETVPC+TKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAIF
Sbjct: 205 IKASVEKNRLFHAIETVPCITKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAIF 264

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFV
Sbjct: 265 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFV 324

Query: 241 CEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNAQNPFDWMELISLQGKTNFFEK 300
           CEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYN QNPFDWMELISLQGKTNFFEK
Sbjct: 325 CEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNVQNPFDWMELISLQGKTNFFEK 384

Query: 301 RVGDYQKASVMSSLDGIGGIHEFKMDEDF 330
           RVGDYQKASVMSSLDGIGGIHEFKMDEDF
Sbjct: 385 RVGDYQKASVMSSLDGIGGIHEFKMDEDF 413

[Close]

BLAST of Carg24278 vs. NCBI nr
Match: XP_022133704.1 (ribonucleoside-diphosphate reductase small chain [Momordica charantia])

HSP 1 Score: 642.9 bits (1657), Expect = 1.5e-180
Identity = 310/329 (94.22%), Postives = 319/329 (96.96%), Query Frame = 0


Query: 1   MPAISEEPLLAPNPDRFCMFPIEYPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADE 60
           MPAI EEPLLAPNPDRFCMFPIEYPQIWEMYKKA+ASFWTAEEVDLSQDLRHWE LTADE
Sbjct: 1   MPAIPEEPLLAPNPDRFCMFPIEYPQIWEMYKKAMASFWTAEEVDLSQDLRHWEGLTADE 60

Query: 61  KHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           KHFI HVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFISHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSVEKNRLFHAMETVPCVTKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAIF 180
           IKDSVEKNRLFHA+ETVPCV KKAEWAL WIDGSESFAERLI FACVEGIFFSGSFCAIF
Sbjct: 121 IKDSVEKNRLFHAIETVPCVAKKAEWALKWIDGSESFAERLIGFACVEGIFFSGSFCAIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMR +LS++KV+GIVR+AVDIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRNQLSDDKVKGIVRQAVDIEREFV 240

Query: 241 CEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNAQNPFDWMELISLQGKTNFFEK 300
           C+ALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYN QNPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNVQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGDYQKASVMSSLDGIGGIHEFKMDEDF 330
           RVG+YQKASVMSSL G GGIHEFKMDEDF
Sbjct: 301 RVGEYQKASVMSSLHGNGGIHEFKMDEDF 329

[Close]

BLAST of Carg24278 vs. ExPASy Swiss-Prot
Match: P49730 (Ribonucleoside-diphosphate reductase small chain OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 595.1 bits (1533), Expect = 4.8e-169
Identity = 285/329 (86.63%), Postives = 308/329 (93.62%), Query Frame = 0


Query: 1   MPAISEEPLLAPNPDRFCMFPIEYPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADE 60
           MP I EEPLLA +PDRFCMFPI+YPQIWEMYKKA+ASFWTAEEVDLS D RHWE LT  E
Sbjct: 1   MPLIPEEPLLASSPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSSDTRHWETLTPGE 60

Query: 61  KHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           +HFI HVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLE+Y
Sbjct: 61  RHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESY 120

Query: 121 IKDSVEKNRLFHAMETVPCVTKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAIF 180
           IKDS EK+RLF A+ET PCV KKA+WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIF
Sbjct: 121 IKDSDEKSRLFRAVETNPCVEKKAKWALRWIDGSETFAERLVAFACVEGIFFSGSFCAIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSL+R KL+EE+V+GIV +AV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLTEERVKGIVADAVEIEREFV 240

Query: 241 CEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNAQNPFDWMELISLQGKTNFFEK 300
           C+ALPCALVGMNGDLMS+YIEFVADRLL ALG+ K+YNAQNPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGDLMSKYIEFVADRLLDALGYDKLYNAQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGDYQKASVMSSLDGIGGIHEFKMDEDF 330
           RVG+YQKASVMSSL+G G  HEFK+DEDF
Sbjct: 301 RVGEYQKASVMSSLNGNGATHEFKLDEDF 329

[Close]

BLAST of Carg24278 vs. ExPASy Swiss-Prot
Match: Q9LSD0 (Ribonucleoside-diphosphate reductase small chain C OS=Arabidopsis thaliana OX=3702 GN=TSO2 PE=1 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 4.2e-157
Identity = 266/332 (80.12%), Postives = 298/332 (89.76%), Query Frame = 0


Query: 1   MPAISEEPLLAPNPDRFCMFPIEYPQIWEMYKKAVASFWTAEEVDLSQDLRHWE-ALTAD 60
           MP++ EEPLL P PDRFCMFPI YPQIWEMYKKA ASFWTAEEVDLSQD R WE +L   
Sbjct: 1   MPSMPEEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLNDG 60

Query: 61  EKHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLET 120
           E+HFIKHVLAFFAASDGIVLENLA RFM +VQV+EARAFYGFQIAIENIHSEMYSLLL+T
Sbjct: 61  ERHFIKHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDT 120

Query: 121 YIKDSVEKNRLFHAMETVPCVTKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAI 180
           YIKD+ E++ LF A+ET+PCV KKA+WA+ WIDGS++FAER+IAFACVEGIFFSGSFC+I
Sbjct: 121 YIKDNKERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSI 180

Query: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREF 240
           FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY+L++ KLSEE+V+ IV +AV+IEREF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYTLLKTKLSEERVKSIVCDAVEIEREF 240

Query: 241 VCEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNAQNPFDWMELISLQGKTNFFE 300
           VC+ALPCALVGMN DLMS+YIEFVADRLL ALG+ K+Y   NPFDWMELISLQGKTNFFE
Sbjct: 241 VCDALPCALVGMNRDLMSQYIEFVADRLLGALGYGKVYGVTNPFDWMELISLQGKTNFFE 300

Query: 301 KRVGDYQKASVMSSLDGIGGI--HEFKMDEDF 330
           KRVGDYQKASVMSS++G G    H F +DEDF
Sbjct: 301 KRVGDYQKASVMSSVNGNGAFDNHVFSLDEDF 332

[Close]

BLAST of Carg24278 vs. ExPASy Swiss-Prot
Match: P0DKH3 (Ribonucleoside-diphosphate reductase small chain B OS=Arabidopsis thaliana OX=3702 GN=RNR2B PE=2 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 3.5e-156
Identity = 261/333 (78.38%), Postives = 300/333 (90.09%), Query Frame = 0


Query: 1   MPAISEEPLLAPNPDRFCMFPIEYPQIWEMYKKAVASFWTAEEVDLSQDLRHWE-ALTAD 60
           MP++ EEP+L P PDRFCMFPI+YPQIWEMYKKA ASFWTAEEVDLSQD R WE +LT D
Sbjct: 1   MPSMPEEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTND 60

Query: 61  EKHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLET 120
           E+HFIKHVLAFFAASDGIVLENL+ RFM +VQ++EARAFYGFQIAIENIHSEMYSLLL+T
Sbjct: 61  ERHFIKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDT 120

Query: 121 YIKDSVEKNRLFHAMETVPCVTKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAI 180
           YIKD+ E++ LF A+ET+PCVTKKAEWA+ WI+GS+SFAER++AFACVEGIFFSGSFC+I
Sbjct: 121 YIKDNKERDHLFRAIETIPCVTKKAEWAMKWINGSQSFAERIVAFACVEGIFFSGSFCSI 180

Query: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREF 240
           FWLKKRGLMPGLTFSNELISRDEGLHCDFACL+YSL+R KL E++++ IV +AV+IEREF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLIYSLLRTKLDEDRLKAIVCDAVEIEREF 240

Query: 241 VCEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNAQNPFDWMELISLQGKTNFFE 300
           VC+ALPCALVGMN +LMS+YIEFVADRLL ALG +K+Y   NPFDWMELISLQGKTNFFE
Sbjct: 241 VCDALPCALVGMNRELMSQYIEFVADRLLAALGCAKVYGVSNPFDWMELISLQGKTNFFE 300

Query: 301 KRVGDYQKASVMSSLDGIGGI---HEFKMDEDF 330
           KRVG+YQKAS+MSS+ G       H FK+DEDF
Sbjct: 301 KRVGEYQKASIMSSVHGNAAFNDDHVFKLDEDF 333

[Close]

BLAST of Carg24278 vs. ExPASy Swiss-Prot
Match: P50651 (Ribonucleoside-diphosphate reductase small chain A OS=Arabidopsis thaliana OX=3702 GN=RNR2A PE=1 SV=2)

HSP 1 Score: 513.1 bits (1320), Expect = 2.4e-144
Identity = 247/325 (76.00%), Postives = 278/325 (85.54%), Query Frame = 0


Query: 5   SEEPLLAPNPDRFCMFPIEYPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADEKHFI 64
           SEEPLL     RF MFPI Y  IWEMYKKA ASFWTAEEVDLS D++ WEALT  EKHFI
Sbjct: 17  SEEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSEKHFI 76

Query: 65  KHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
            H+LAFFAASDGIVLENLA RF+ +VQV EARAFYGFQIA+ENIHSEMYSLLLET+IKDS
Sbjct: 77  SHILAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIKDS 136

Query: 125 VEKNRLFHAMETVPCVTKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAIFWLKK 184
            EK+RLF+A+ET+PC++KKA+W L+WI    SFA RL+AFACVEGIFFSGSFCAIFWLKK
Sbjct: 137 KEKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRLVAFACVEGIFFSGSFCAIFWLKK 196

Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFVCEAL 244
           RGLMPGLTFSNELISRDEGLHCDFACLLYSL++K+L  EKV  IV EAV+IE EFVC+AL
Sbjct: 197 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPLEKVYQIVHEAVEIETEFVCKAL 256

Query: 245 PCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNAQNPFDWMELISLQGKTNFFEKRVGD 304
           PC L+GMN +LMS+YI+FVADRLLV LG  + Y A+NPFDWME ISLQGKTNFFEKRVG+
Sbjct: 257 PCDLIGMNSNLMSQYIQFVADRLLVTLGCERTYKAENPFDWMEFISLQGKTNFFEKRVGE 316

Query: 305 YQKASVMSSLDGIGGIHEFKMDEDF 330
           YQKASVMS+L      +EF  +EDF
Sbjct: 317 YQKASVMSNLQNGNQNYEFTTEEDF 341

[Close]

BLAST of Carg24278 vs. ExPASy Swiss-Prot
Match: P07201 (Ribonucleoside-diphosphate reductase small chain OS=Spisula solidissima OX=6584 PE=2 SV=2)

HSP 1 Score: 463.4 bits (1191), Expect = 2.2e-129
Identity = 225/324 (69.44%), Postives = 266/324 (82.10%), Query Frame = 0


Query: 7   EPLLAPNPDRFCMFPIEYPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADEKHFIKH 66
           EPLLA NP RF + PI+Y  IW+MYKKA ASFWTAEEVDLS+D+ HWE+L  +EKHFI H
Sbjct: 62  EPLLADNPRRFVVLPIQYHDIWKMYKKAEASFWTAEEVDLSKDMAHWESLKKEEKHFISH 121

Query: 67  VLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSVE 126
           VLAFFAASDGIV ENL  RF KEVQV EAR FYGFQIA+ENIHSEMYSLL++TYIKD  E
Sbjct: 122 VLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPQE 181

Query: 127 KNRLFHAMETVPCVTKKAEWALNWI-DGSESFAERLIAFACVEGIFFSGSFCAIFWLKKR 186
           ++ LF+A+ET+PCV +KA+WA+ WI D S S+AER++AFA VEGIFFSGSF +IFWLKKR
Sbjct: 182 RDFLFNAIETMPCVKEKADWAMRWINDDSSSYAERVVAFAAVEGIFFSGSFASIFWLKKR 241

Query: 187 GLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFVCEALP 246
           G+MPGLTFSNELISRDEGLHCDFACL++S +  K S+E++  I+ EAV IE+ F+ EALP
Sbjct: 242 GIMPGLTFSNELISRDEGLHCDFACLMFSHLVNKPSQERIHQIIDEAVKIEQVFLTEALP 301

Query: 247 CALVGMNGDLMSEYIEFVADRLLVALGHSKIYNAQNPFDWMELISLQGKTNFFEKRVGDY 306
           C L+GMN DLM +YIEFVADRLL+ L   K+YN +NPFD+ME ISL+GKTNFFEKRVG+Y
Sbjct: 302 CRLIGMNCDLMRQYIEFVADRLLLELKCDKLYNKENPFDFMEHISLEGKTNFFEKRVGEY 361

Query: 307 QKASVMSSLDGIGGIHEFKMDEDF 330
           QK  VMS     G  H F +D DF
Sbjct: 362 QKMGVMSG-GNTGDSHAFTLDADF 384

[Close]

BLAST of Carg24278 vs. ExPASy TrEMBL
Match: A0A6J1JZC2 (ribonucleoside-diphosphate reductase small chain-like OS=Cucurbita maxima OX=3661 GN=LOC111489238 PE=3 SV=1)

HSP 1 Score: 670.2 bits (1728), Expect = 4.3e-189
Identity = 325/329 (98.78%), Postives = 328/329 (99.70%), Query Frame = 0


Query: 1   MPAISEEPLLAPNPDRFCMFPIEYPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADE 60
           MPAISEEPLLAPNPDRFCMFPI+YPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADE
Sbjct: 1   MPAISEEPLLAPNPDRFCMFPIQYPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADE 60

Query: 61  KHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           KHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSVEKNRLFHAMETVPCVTKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAIF 180
           IKDSVEKNRLFHAMETVPC+TKKAEWALNWIDGS+SFAERLIAFACVEGIFFSGSFCAIF
Sbjct: 121 IKDSVEKNRLFHAMETVPCITKKAEWALNWIDGSKSFAERLIAFACVEGIFFSGSFCAIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFV 240

Query: 241 CEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNAQNPFDWMELISLQGKTNFFEK 300
           CEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYN QNPFDWMELISLQGKTNFFEK
Sbjct: 241 CEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNVQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGDYQKASVMSSLDGIGGIHEFKMDEDF 330
           RVGDYQKASVMSSLDGIGGIHEFKMDEDF
Sbjct: 301 RVGDYQKASVMSSLDGIGGIHEFKMDEDF 329

[Close]

BLAST of Carg24278 vs. ExPASy TrEMBL
Match: A0A6J1FG17 (ribonucleoside-diphosphate reductase small chain-like OS=Cucurbita moschata OX=3662 GN=LOC111445088 PE=3 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 3.6e-188
Identity = 324/329 (98.48%), Postives = 327/329 (99.39%), Query Frame = 0


Query: 1   MPAISEEPLLAPNPDRFCMFPIEYPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADE 60
           MPAISEEPLLAPNPDRFCMFPI+YPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADE
Sbjct: 85  MPAISEEPLLAPNPDRFCMFPIQYPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADE 144

Query: 61  KHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           KHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 145 KHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 204

Query: 121 IKDSVEKNRLFHAMETVPCVTKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAIF 180
           IK SVEKNRLFHA+ETVPC+TKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAIF
Sbjct: 205 IKASVEKNRLFHAIETVPCITKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAIF 264

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFV
Sbjct: 265 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFV 324

Query: 241 CEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNAQNPFDWMELISLQGKTNFFEK 300
           CEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYN QNPFDWMELISLQGKTNFFEK
Sbjct: 325 CEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNVQNPFDWMELISLQGKTNFFEK 384

Query: 301 RVGDYQKASVMSSLDGIGGIHEFKMDEDF 330
           RVGDYQKASVMSSLDGIGGIHEFKMDEDF
Sbjct: 385 RVGDYQKASVMSSLDGIGGIHEFKMDEDF 413

[Close]

BLAST of Carg24278 vs. ExPASy TrEMBL
Match: A0A6J1BWR9 (ribonucleoside-diphosphate reductase small chain OS=Momordica charantia OX=3673 GN=LOC111006221 PE=3 SV=1)

HSP 1 Score: 642.9 bits (1657), Expect = 7.4e-181
Identity = 310/329 (94.22%), Postives = 319/329 (96.96%), Query Frame = 0


Query: 1   MPAISEEPLLAPNPDRFCMFPIEYPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADE 60
           MPAI EEPLLAPNPDRFCMFPIEYPQIWEMYKKA+ASFWTAEEVDLSQDLRHWE LTADE
Sbjct: 1   MPAIPEEPLLAPNPDRFCMFPIEYPQIWEMYKKAMASFWTAEEVDLSQDLRHWEGLTADE 60

Query: 61  KHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           KHFI HVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  KHFISHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSVEKNRLFHAMETVPCVTKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAIF 180
           IKDSVEKNRLFHA+ETVPCV KKAEWAL WIDGSESFAERLI FACVEGIFFSGSFCAIF
Sbjct: 121 IKDSVEKNRLFHAIETVPCVAKKAEWALKWIDGSESFAERLIGFACVEGIFFSGSFCAIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMR +LS++KV+GIVR+AVDIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRNQLSDDKVKGIVRQAVDIEREFV 240

Query: 241 CEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNAQNPFDWMELISLQGKTNFFEK 300
           C+ALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYN QNPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNVQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGDYQKASVMSSLDGIGGIHEFKMDEDF 330
           RVG+YQKASVMSSL G GGIHEFKMDEDF
Sbjct: 301 RVGEYQKASVMSSLHGNGGIHEFKMDEDF 329

[Close]

BLAST of Carg24278 vs. ExPASy TrEMBL
Match: A0A6P4AGQ7 (ribonucleoside-diphosphate reductase small chain OS=Ziziphus jujuba OX=326968 GN=LOC107427918 PE=3 SV=1)

HSP 1 Score: 624.0 bits (1608), Expect = 3.5e-175
Identity = 299/329 (90.88%), Postives = 314/329 (95.44%), Query Frame = 0


Query: 1   MPAISEEPLLAPNPDRFCMFPIEYPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADE 60
           MPA  EEPLLAPNPDRFCMFPI+YPQIWEMYKKA ASFWTAEEVDLSQD+RHWE LT DE
Sbjct: 75  MPAYPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDVRHWENLTPDE 134

Query: 61  KHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           KHFI HVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 135 KHFISHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 194

Query: 121 IKDSVEKNRLFHAMETVPCVTKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAIF 180
           IKD VEKNRLFHA+ETVPCV KKAEWAL WIDG+ESFAERL+AFACVEGIFFSGSFCAIF
Sbjct: 195 IKDPVEKNRLFHAIETVPCVAKKAEWALRWIDGTESFAERLVAFACVEGIFFSGSFCAIF 254

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLY+LMRKKLSEE+V+GIVR+AVDIEREFV
Sbjct: 255 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYTLMRKKLSEERVKGIVRDAVDIEREFV 314

Query: 241 CEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNAQNPFDWMELISLQGKTNFFEK 300
           C+ALPCALVGMNGDLMS+YIEFVADRLL ALG+ KIYN QNPFDWMELISLQGKTNFFEK
Sbjct: 315 CDALPCALVGMNGDLMSQYIEFVADRLLGALGYGKIYNVQNPFDWMELISLQGKTNFFEK 374

Query: 301 RVGDYQKASVMSSLDGIGGIHEFKMDEDF 330
           RVG+YQKASVMSS++G GG H FKMDEDF
Sbjct: 375 RVGEYQKASVMSSINGDGGTHVFKMDEDF 403

[Close]

BLAST of Carg24278 vs. ExPASy TrEMBL
Match: A0A5N6QXP3 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_007226 PE=3 SV=1)

HSP 1 Score: 619.0 bits (1595), Expect = 1.1e-173
Identity = 293/329 (89.06%), Postives = 316/329 (96.05%), Query Frame = 0


Query: 1   MPAISEEPLLAPNPDRFCMFPIEYPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADE 60
           MPA  EEPLLAPNPDRFCMFPI+YP+IWEMYKKA ASFWTAEEVDLSQDLRHW+ L  DE
Sbjct: 1   MPAFPEEPLLAPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDLRHWDNLNPDE 60

Query: 61  KHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
           +HFI HVLAFFAASDGIVLENLAGRFMKEVQV+EARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61  RHFITHVLAFFAASDGIVLENLAGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 121 IKDSVEKNRLFHAMETVPCVTKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAIF 180
           IKDSVEKNRLFHA+ETVPCV KKA+WAL WIDGSE+FAER+IAFACVEGIFFSGSFC+IF
Sbjct: 121 IKDSVEKNRLFHAIETVPCVAKKAQWALRWIDGSETFAERIIAFACVEGIFFSGSFCSIF 180

Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFV 240
           WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSL+RKKLSEE+V+GIVREAV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEERVKGIVREAVEIEREFV 240

Query: 241 CEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNAQNPFDWMELISLQGKTNFFEK 300
           C+ALPCALVGMNGDLMS+YIEFVADRLLV+LG+ K+YNAQNPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGDLMSQYIEFVADRLLVSLGYGKVYNAQNPFDWMELISLQGKTNFFEK 300

Query: 301 RVGDYQKASVMSSLDGIGGIHEFKMDEDF 330
           RVG+YQKASVMSS++G GG H FK+DEDF
Sbjct: 301 RVGEYQKASVMSSINGNGGTHVFKLDEDF 329

[Close]

BLAST of Carg24278 vs. TAIR 10
Match: AT3G27060.1 (Ferritin/ribonucleotide reductase-like family protein )

HSP 1 Score: 555.4 bits (1430), Expect = 3.0e-158
Identity = 266/332 (80.12%), Postives = 298/332 (89.76%), Query Frame = 0


Query: 1   MPAISEEPLLAPNPDRFCMFPIEYPQIWEMYKKAVASFWTAEEVDLSQDLRHWE-ALTAD 60
           MP++ EEPLL P PDRFCMFPI YPQIWEMYKKA ASFWTAEEVDLSQD R WE +L   
Sbjct: 1   MPSMPEEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLNDG 60

Query: 61  EKHFIKHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLET 120
           E+HFIKHVLAFFAASDGIVLENLA RFM +VQV+EARAFYGFQIAIENIHSEMYSLLL+T
Sbjct: 61  ERHFIKHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDT 120

Query: 121 YIKDSVEKNRLFHAMETVPCVTKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAI 180
           YIKD+ E++ LF A+ET+PCV KKA+WA+ WIDGS++FAER+IAFACVEGIFFSGSFC+I
Sbjct: 121 YIKDNKERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSI 180

Query: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREF 240
           FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY+L++ KLSEE+V+ IV +AV+IEREF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYTLLKTKLSEERVKSIVCDAVEIEREF 240

Query: 241 VCEALPCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNAQNPFDWMELISLQGKTNFFE 300
           VC+ALPCALVGMN DLMS+YIEFVADRLL ALG+ K+Y   NPFDWMELISLQGKTNFFE
Sbjct: 241 VCDALPCALVGMNRDLMSQYIEFVADRLLGALGYGKVYGVTNPFDWMELISLQGKTNFFE 300

Query: 301 KRVGDYQKASVMSSLDGIGGI--HEFKMDEDF 330
           KRVGDYQKASVMSS++G G    H F +DEDF
Sbjct: 301 KRVGDYQKASVMSSVNGNGAFDNHVFSLDEDF 332

[Close]

BLAST of Carg24278 vs. TAIR 10
Match: AT3G23580.1 (ribonucleotide reductase 2A )

HSP 1 Score: 513.1 bits (1320), Expect = 1.7e-145
Identity = 247/325 (76.00%), Postives = 278/325 (85.54%), Query Frame = 0


Query: 5   SEEPLLAPNPDRFCMFPIEYPQIWEMYKKAVASFWTAEEVDLSQDLRHWEALTADEKHFI 64
           SEEPLL     RF MFPI Y  IWEMYKKA ASFWTAEEVDLS D++ WEALT  EKHFI
Sbjct: 17  SEEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSEKHFI 76

Query: 65  KHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
            H+LAFFAASDGIVLENLA RF+ +VQV EARAFYGFQIA+ENIHSEMYSLLLET+IKDS
Sbjct: 77  SHILAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIKDS 136

Query: 125 VEKNRLFHAMETVPCVTKKAEWALNWIDGSESFAERLIAFACVEGIFFSGSFCAIFWLKK 184
            EK+RLF+A+ET+PC++KKA+W L+WI    SFA RL+AFACVEGIFFSGSFCAIFWLKK
Sbjct: 137 KEKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRLVAFACVEGIFFSGSFCAIFWLKK 196

Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLMRKKLSEEKVQGIVREAVDIEREFVCEAL 244
           RGLMPGLTFSNELISRDEGLHCDFACLLYSL++K+L  EKV  IV EAV+IE EFVC+AL
Sbjct: 197 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPLEKVYQIVHEAVEIETEFVCKAL 256

Query: 245 PCALVGMNGDLMSEYIEFVADRLLVALGHSKIYNAQNPFDWMELISLQGKTNFFEKRVGD 304
           PC L+GMN +LMS+YI+FVADRLLV LG  + Y A+NPFDWME ISLQGKTNFFEKRVG+
Sbjct: 257 PCDLIGMNSNLMSQYIQFVADRLLVTLGCERTYKAENPFDWMEFISLQGKTNFFEKRVGE 316

Query: 305 YQKASVMSSLDGIGGIHEFKMDEDF 330
           YQKASVMS+L      +EF  +EDF
Sbjct: 317 YQKASVMSNLQNGNQNYEFTTEEDF 341

The following BLAST results are available for this feature:

BLAST of Carg24278 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6578369.1	3.6e-190	100.00	hypothetical protein SDJN03_22817, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023550668.1	4.0e-189	99.09	ribonucleoside-diphosphate reductase small chain-like [Cucurbita pepo subsp. pep...	[more]
XP_022993124.1	8.9e-189	98.78	ribonucleoside-diphosphate reductase small chain-like [Cucurbita maxima]	[more]
XP_022939079.1	7.5e-188	98.48	ribonucleoside-diphosphate reductase small chain-like [Cucurbita moschata]	[more]
XP_022133704.1	1.5e-180	94.22	ribonucleoside-diphosphate reductase small chain [Momordica charantia]	[more]

BLAST of Carg24278 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49730	4.8e-169	86.63	Ribonucleoside-diphosphate reductase small chain OS=Nicotiana tabacum OX=4097 PE...	[more]
Q9LSD0	4.2e-157	80.12	Ribonucleoside-diphosphate reductase small chain C OS=Arabidopsis thaliana OX=37...	[more]
P0DKH3	3.5e-156	78.38	Ribonucleoside-diphosphate reductase small chain B OS=Arabidopsis thaliana OX=37...	[more]
P50651	2.4e-144	76.00	Ribonucleoside-diphosphate reductase small chain A OS=Arabidopsis thaliana OX=37...	[more]
P07201	2.2e-129	69.44	Ribonucleoside-diphosphate reductase small chain OS=Spisula solidissima OX=6584 ...	[more]

BLAST of Carg24278 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JZC2	4.3e-189	98.78	ribonucleoside-diphosphate reductase small chain-like OS=Cucurbita maxima OX=366...	[more]
A0A6J1FG17	3.6e-188	98.48	ribonucleoside-diphosphate reductase small chain-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1BWR9	7.4e-181	94.22	ribonucleoside-diphosphate reductase small chain OS=Momordica charantia OX=3673 ...	[more]
A0A6P4AGQ7	3.5e-175	90.88	ribonucleoside-diphosphate reductase small chain OS=Ziziphus jujuba OX=326968 GN...	[more]
A0A5N6QXP3	1.1e-173	89.06	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_007226 PE=3 SV=1	[more]

BLAST of Carg24278 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27060.1	3.0e-158	80.12	Ferritin/ribonucleotide reductase-like family protein	[more]
AT3G23580.1	1.7e-145	76.00	ribonucleotide reductase 2A	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000358	Ribonucleotide reductase small subunit family	PFAM	PF00268	Ribonuc_red_sm	coord: 16..282 e-value: 8.0E-116 score: 386.4
IPR000358	Ribonucleotide reductase small subunit family	PANTHER	PTHR23409	RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN	coord: 5..329
IPR012348	Ribonucleotide reductase-like	GENE3D	1.10.620.20	Ribonucleotide Reductase, subunit A	coord: 3..307 e-value: 1.4E-129 score: 433.5
None	No IPR available	PIRSR	PIRSR000355-2	PIRSR000355-2	coord: 20..313 e-value: 5.0E-66 score: 221.0
None	No IPR available	PANTHER	PTHR23409:SF38	RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN	coord: 5..329
IPR030475	Ribonucleotide reductase small subunit, acitve site	PROSITE	PS00368	RIBORED_SMALL	coord: 105..121
IPR033909	Ribonucleotide reductase small subunit	CDD	cd01049	RNRR2	coord: 17..291 e-value: 5.82342E-135 score: 383.129
IPR009078	Ferritin-like superfamily	SUPERFAMILY	47240	Ferritin-like	coord: 5..307

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24278-RA	Carg24278-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009263	deoxyribonucleotide biosynthetic process
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
molecular_function	GO:0016491	oxidoreductase activity