Carg24274 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24274
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Triacylglycerol lipase 2-like
Location	Carg_Chr15: 501020 .. 502252 (-)
RNA-Seq Expression	Carg24274
Synteny	Carg24274

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTCATGTGCTTCCCTTTGCAGTAAATCGGAATGCTCCGCCGTGAAGCCACCGCCGGCGCCGTCGGAGTCTGTGAAGGACAAGTTTGAGATTCCGCCTTCACCGATCAAACACTACAAGCTCCAAGACAACGCCGATTCTGTCTTCAAGGACATCTCTGTAGTACCCCATCACCACAAGACGCCTTCTGGTTCGATTCTTCTTCGCTCTTTTCTGGGTTTTGTTTTTCTCTCTGTTCTCTTTCCGCCGCGCCATTCCTGGATTGCCCTGTTTCTTCAATCTGTTTGTTCTTCACAGGCAGCAAAGAAGAAGCCTTCTTTGATTCTCGAGCGTGGTTGGATTCCGATTGTGAAGATTTCTTCAGTGTCAAAGGAGGTGACCATCATAATCCAAGATTTCAATTTCCTTTTTCAGATTATTTAGATTCATAAATCACAAATTAATGGTAATAGAATTGTTTTAGCTCAAATCATGTAAGCATGGAGGTTTGAATTCTAGGTCGGATTAAAAACAAACATATATTCTTTAAAAGATTTAAATTTGATTTTCATCATCAACTTTTGTATTTTTAAACTTGCTTTAAATTTATATATTAATTAAAAGTACTTTTTAAAAACTATGTTGAGGATGGTTATATATTTTAAAGTTTACTCATTTTAGTTTTGAAGTTTGTTCCCTCCCTTGTATTTTTAATTCTTGAAATACAAAAAATAACTATTTTAGTTAGAAATAATTATTGAGTAAACTAAATTTAAGATTAAAAAAAAAATAACATACCAATATGATGAAAATAATTATTTATTCAAGTATAATAAGTTTGAAATACTAAAACTTAAATTTAAACCTTATACAGATTTCACCCCATCCAGGGACAATACTCCAATTCACCACCGCTTTACGGCGGGAACTCCCCGAGCTAGCCAAGCCGGTGCCGACGACAAACCATCTACATTCAACTCGTCGCCATTACCGACGAAGAGGAGGAAGAAGCTGGCTGATCTATTCCGAGAGAGCCTCGGAGATGAGGCGAGTTTTGCTTTCTTAAATCACAACGACAATCGGAAAACCGATGAGCCTTGCCTTCCGGGAACTGGTTCGGTCGGCAACGGCATTGCTGACAAAAATATGATCGGATATGAGTCGAAGTTCTGTTGCCTTGCGCCGTTGGTTTCGCGTAACGGTTCGCGCGAGAGGGAGGAGGATTTGAAGGTTGTTAATGGCGTATCTTGA

mRNA sequence

ATGGGCTCATGTGCTTCCCTTTGCAGTAAATCGGAATGCTCCGCCGTGAAGCCACCGCCGGCGCCGTCGGAGTCTGTGAAGGACAAGTTTGAGATTCCGCCTTCACCGATCAAACACTACAAGCTCCAAGACAACGCCGATTCTGTCTTCAAGGACATCTCTGTAGTACCCCATCACCACAAGACGCCTTCTGGTTCGATTCTTCTTCGCTCTTTTCTGGGTTTTGTTTTTCTCTCTGTTCTCTTTCCGCCGCGCCATTCCTGGATTGCCCTGTTTCTTCAATCTGTTTGTTCTTCACAGGCAGCAAAGAAGAAGCCTTCTTTGATTCTCGAGCGTGGTTGGATTCCGATTGTGAAGATTTCTTCAGTGTCAAAGGAGATTCATAAATCACAAATTAATGATTTCACCCCATCCAGGGACAATACTCCAATTCACCACCGCTTTACGGCGGGAACTCCCCGAGCTAGCCAAGCCGGTGCCGACGACAAACCATCTACATTCAACTCGTCGCCATTACCGACGAAGAGGAGGAAGAAGCTGGCTGATCTATTCCGAGAGAGCCTCGGAGATGAGGCGAGTTTTGCTTTCTTAAATCACAACGACAATCGGAAAACCGATGAGCCTTGCCTTCCGGGAACTGGTTCGGTCGGCAACGGCATTGCTGACAAAAATATGATCGGATATGAGTCGAAGTTCTGTTGCCTTGCGCCGTTGGTTTCGCGTAACGGTTCGCGCGAGAGGGAGGAGGATTTGAAGGTTGTTAATGGCGTATCTTGA

Coding sequence (CDS)

ATGGGCTCATGTGCTTCCCTTTGCAGTAAATCGGAATGCTCCGCCGTGAAGCCACCGCCGGCGCCGTCGGAGTCTGTGAAGGACAAGTTTGAGATTCCGCCTTCACCGATCAAACACTACAAGCTCCAAGACAACGCCGATTCTGTCTTCAAGGACATCTCTGTAGTACCCCATCACCACAAGACGCCTTCTGGTTCGATTCTTCTTCGCTCTTTTCTGGGTTTTGTTTTTCTCTCTGTTCTCTTTCCGCCGCGCCATTCCTGGATTGCCCTGTTTCTTCAATCTGTTTGTTCTTCACAGGCAGCAAAGAAGAAGCCTTCTTTGATTCTCGAGCGTGGTTGGATTCCGATTGTGAAGATTTCTTCAGTGTCAAAGGAGATTCATAAATCACAAATTAATGATTTCACCCCATCCAGGGACAATACTCCAATTCACCACCGCTTTACGGCGGGAACTCCCCGAGCTAGCCAAGCCGGTGCCGACGACAAACCATCTACATTCAACTCGTCGCCATTACCGACGAAGAGGAGGAAGAAGCTGGCTGATCTATTCCGAGAGAGCCTCGGAGATGAGGCGAGTTTTGCTTTCTTAAATCACAACGACAATCGGAAAACCGATGAGCCTTGCCTTCCGGGAACTGGTTCGGTCGGCAACGGCATTGCTGACAAAAATATGATCGGATATGAGTCGAAGTTCTGTTGCCTTGCGCCGTTGGTTTCGCGTAACGGTTCGCGCGAGAGGGAGGAGGATTTGAAGGTTGTTAATGGCGTATCTTGA

Protein sequence

MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHHKTPSGSILLRSFLGFVFLSVLFPPRHSWIALFLQSVCSSQAAKKKPSLILERGWIPIVKISSVSKEIHKSQINDFTPSRDNTPIHHRFTAGTPRASQAGADDKPSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGSVGNGIADKNMIGYESKFCCLAPLVSRNGSREREEDLKVVNGVS

Homology

[Close]

BLAST of Carg24274 vs. NCBI nr
Match: KAG7015955.1 (hypothetical protein SDJN02_21059, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 522.7 bits (1345), Expect = 1.8e-144
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0


Query: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60
           MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH
Sbjct: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60

Query: 61  KTPSGSILLRSFLGFVFLSVLFPPRHSWIALFLQSVCSSQAAKKKPSLILERGWIPIVKI 120
           KTPSGSILLRSFLGFVFLSVLFPPRHSWIALFLQSVCSSQAAKKKPSLILERGWIPIVKI
Sbjct: 61  KTPSGSILLRSFLGFVFLSVLFPPRHSWIALFLQSVCSSQAAKKKPSLILERGWIPIVKI 120

Query: 121 SSVSKEIHKSQINDFTPSRDNTPIHHRFTAGTPRASQAGADDKPSTFNSSPLPTKRRKKL 180
           SSVSKEIHKSQINDFTPSRDNTPIHHRFTAGTPRASQAGADDKPSTFNSSPLPTKRRKKL
Sbjct: 121 SSVSKEIHKSQINDFTPSRDNTPIHHRFTAGTPRASQAGADDKPSTFNSSPLPTKRRKKL 180

Query: 181 ADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGSVGNGIADKNMIGYESKFCCLAPLVS 240
           ADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGSVGNGIADKNMIGYESKFCCLAPLVS
Sbjct: 181 ADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGSVGNGIADKNMIGYESKFCCLAPLVS 240

Query: 241 RNGSREREEDLKVVNGVS 259
           RNGSREREEDLKVVNGVS
Sbjct: 241 RNGSREREEDLKVVNGVS 258

[Close]

BLAST of Carg24274 vs. NCBI nr
Match: XP_022938376.1 (uncharacterized protein At3g27210-like [Cucurbita moschata])

HSP 1 Score: 369.4 bits (947), Expect = 2.5e-98
Identity = 194/258 (75.19%), Postives = 198/258 (76.74%), Query Frame = 0


Query: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60
           MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH
Sbjct: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60

Query: 61  KTPSGSILLRSFLGFVFLSVLFPPRHSWIALFLQSVCSSQAAKKKPSLILERGWIPIVKI 120
           KTPSGS                                     K+ +    R W+     
Sbjct: 61  KTPSGS-------------------------------------KEEAFFDSRAWL----- 120

Query: 121 SSVSKEIHKSQINDFTPSRDNTPIHHRFTAGTPRASQAGADDKPSTFNSSPLPTKRRKKL 180
                E   S   DFTPSRDNTPIHHRFTAGTPRASQAGADDKPSTFNSSPLPTKRRKKL
Sbjct: 121 -DSDCEDFFSVKGDFTPSRDNTPIHHRFTAGTPRASQAGADDKPSTFNSSPLPTKRRKKL 180

Query: 181 ADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGSVGNGIADKNMIGYESKFCCLAPLVS 240
           ADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGSVGNG+ADKNMIGYESKFCCLA LVS
Sbjct: 181 ADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGSVGNGVADKNMIGYESKFCCLARLVS 215

Query: 241 RNGSREREEDLKVVNGVS 259
           RNGSREREEDLKVVNGVS
Sbjct: 241 RNGSREREEDLKVVNGVS 215

[Close]

BLAST of Carg24274 vs. NCBI nr
Match: KAG6578372.1 (hypothetical protein SDJN03_22820, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 350.1 bits (897), Expect = 1.6e-92
Identity = 187/265 (70.57%), Postives = 195/265 (73.58%), Query Frame = 0


Query: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60
           MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH
Sbjct: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60

Query: 61  KTPSGSILLRSFLGFVFLSVLFPPRHSWIALFLQSVCSSQAAKKKPSLILERGWIPIVKI 120
           KTPSGS                                     K+ +    R W+     
Sbjct: 61  KTPSGS-------------------------------------KEEAFFDSRAWL----- 120

Query: 121 SSVSKEIHKSQINDFTPSRDNTPIHHRFTAGTPRASQAGADDKPSTFNSSPLPTKRRKKL 180
                E   S   DFTPSRDNTPIHHRFTAGTPRASQAGADDKPSTFNSSPLPTKRRKKL
Sbjct: 121 -DSDCEDFFSVKGDFTPSRDNTPIHHRFTAGTPRASQAGADDKPSTFNSSPLPTKRRKKL 180

Query: 181 ADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGS-------VGNGIADKNMIGYESKFC 240
           ADLFRESLGDEASFAFLNH+DNRKTDEPCLPGTGS       VGNG+ DKNMIG+ESKFC
Sbjct: 181 ADLFRESLGDEASFAFLNHDDNRKTDEPCLPGTGSVCNSERTVGNGVDDKNMIGFESKFC 222

Query: 241 CLAPLVSRNGSREREEDLKVVNGVS 259
           CL PLVSRN  RER+E+LKVVNGVS
Sbjct: 241 CLPPLVSRNSWRERKEELKVVNGVS 222

[Close]

BLAST of Carg24274 vs. NCBI nr
Match: XP_022992625.1 (uncharacterized protein LOC111488914 [Cucurbita maxima])

HSP 1 Score: 342.4 bits (877), Expect = 3.3e-90
Identity = 184/265 (69.43%), Postives = 191/265 (72.08%), Query Frame = 0


Query: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60
           MGSCASLCS  ECSAVKPPPAP E+V DKFEIPPSPIKHYKLQDNADSVFKDISVVP HH
Sbjct: 1   MGSCASLCSTPECSAVKPPPAPLETVTDKFEIPPSPIKHYKLQDNADSVFKDISVVPPHH 60

Query: 61  KTPSGSILLRSFLGFVFLSVLFPPRHSWIALFLQSVCSSQAAKKKPSLILERGWIPIVKI 120
           KTPSGS                                     K+ +    R W+     
Sbjct: 61  KTPSGS-------------------------------------KEEAFFDSRAWL----- 120

Query: 121 SSVSKEIHKSQINDFTPSRDNTPIHHRFTAGTPRASQAGADDKPSTFNSSPLPTKRRKKL 180
                E   S   DFTPSRDNTPIHHRF AGTPRASQAGADDKPSTFNSSPLPTKRRKKL
Sbjct: 121 -DSDCEDFFSVKGDFTPSRDNTPIHHRFPAGTPRASQAGADDKPSTFNSSPLPTKRRKKL 180

Query: 181 ADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGS-------VGNGIADKNMIGYESKFC 240
           ADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGS       VGNG+ DKNMIG+ESKFC
Sbjct: 181 ADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGSVRNSERTVGNGVDDKNMIGFESKFC 222

Query: 241 CLAPLVSRNGSREREEDLKVVNGVS 259
           CL PLVSRNGSREREE+LKVVNGVS
Sbjct: 241 CLPPLVSRNGSREREEELKVVNGVS 222

[Close]

BLAST of Carg24274 vs. NCBI nr
Match: XP_023550243.1 (uncharacterized protein At3g27210-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 340.9 bits (873), Expect = 9.7e-90
Identity = 182/265 (68.68%), Postives = 192/265 (72.45%), Query Frame = 0


Query: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60
           MGSCASLCS+SECS VKPPPAPSE+VKDKFEIPPSPIKHYKLQ NADSVFKDISVVPHHH
Sbjct: 1   MGSCASLCSQSECSPVKPPPAPSETVKDKFEIPPSPIKHYKLQHNADSVFKDISVVPHHH 60

Query: 61  KTPSGSILLRSFLGFVFLSVLFPPRHSWIALFLQSVCSSQAAKKKPSLILERGWIPIVKI 120
           KTPSGS                                     K+ +    R W+     
Sbjct: 61  KTPSGS-------------------------------------KEEAFFDSRAWL----- 120

Query: 121 SSVSKEIHKSQINDFTPSRDNTPIHHRFTAGTPRASQAGADDKPSTFNSSPLPTKRRKKL 180
                E   S   DFTPSRDNTPIHHRF AGTPRASQA ADDKPSTFNSSPLPTKRRKKL
Sbjct: 121 -DSDSEDFFSVKGDFTPSRDNTPIHHRFPAGTPRASQARADDKPSTFNSSPLPTKRRKKL 180

Query: 181 ADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGS-------VGNGIADKNMIGYESKFC 240
           ADLFRESLGDEASFAFLNHNDNRKT+EPCLPGTGS       VGNG+ DKN IG+ESKFC
Sbjct: 181 ADLFRESLGDEASFAFLNHNDNRKTEEPCLPGTGSVRNSERTVGNGVDDKNTIGFESKFC 222

Query: 241 CLAPLVSRNGSREREEDLKVVNGVS 259
           CL PLVSRNGSRER+E+LKVVNGVS
Sbjct: 241 CLWPLVSRNGSRERKEELKVVNGVS 222

[Close]

BLAST of Carg24274 vs. ExPASy TrEMBL
Match: A0A6J1FCZ7 (uncharacterized protein At3g27210-like OS=Cucurbita moschata OX=3662 GN=LOC111444643 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.2e-98
Identity = 194/258 (75.19%), Postives = 198/258 (76.74%), Query Frame = 0


Query: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60
           MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH
Sbjct: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60

Query: 61  KTPSGSILLRSFLGFVFLSVLFPPRHSWIALFLQSVCSSQAAKKKPSLILERGWIPIVKI 120
           KTPSGS                                     K+ +    R W+     
Sbjct: 61  KTPSGS-------------------------------------KEEAFFDSRAWL----- 120

Query: 121 SSVSKEIHKSQINDFTPSRDNTPIHHRFTAGTPRASQAGADDKPSTFNSSPLPTKRRKKL 180
                E   S   DFTPSRDNTPIHHRFTAGTPRASQAGADDKPSTFNSSPLPTKRRKKL
Sbjct: 121 -DSDCEDFFSVKGDFTPSRDNTPIHHRFTAGTPRASQAGADDKPSTFNSSPLPTKRRKKL 180

Query: 181 ADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGSVGNGIADKNMIGYESKFCCLAPLVS 240
           ADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGSVGNG+ADKNMIGYESKFCCLA LVS
Sbjct: 181 ADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGSVGNGVADKNMIGYESKFCCLARLVS 215

Query: 241 RNGSREREEDLKVVNGVS 259
           RNGSREREEDLKVVNGVS
Sbjct: 241 RNGSREREEDLKVVNGVS 215

[Close]

BLAST of Carg24274 vs. ExPASy TrEMBL
Match: A0A6J1JW82 (uncharacterized protein LOC111488914 OS=Cucurbita maxima OX=3661 GN=LOC111488914 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.6e-90
Identity = 184/265 (69.43%), Postives = 191/265 (72.08%), Query Frame = 0


Query: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60
           MGSCASLCS  ECSAVKPPPAP E+V DKFEIPPSPIKHYKLQDNADSVFKDISVVP HH
Sbjct: 1   MGSCASLCSTPECSAVKPPPAPLETVTDKFEIPPSPIKHYKLQDNADSVFKDISVVPPHH 60

Query: 61  KTPSGSILLRSFLGFVFLSVLFPPRHSWIALFLQSVCSSQAAKKKPSLILERGWIPIVKI 120
           KTPSGS                                     K+ +    R W+     
Sbjct: 61  KTPSGS-------------------------------------KEEAFFDSRAWL----- 120

Query: 121 SSVSKEIHKSQINDFTPSRDNTPIHHRFTAGTPRASQAGADDKPSTFNSSPLPTKRRKKL 180
                E   S   DFTPSRDNTPIHHRF AGTPRASQAGADDKPSTFNSSPLPTKRRKKL
Sbjct: 121 -DSDCEDFFSVKGDFTPSRDNTPIHHRFPAGTPRASQAGADDKPSTFNSSPLPTKRRKKL 180

Query: 181 ADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGS-------VGNGIADKNMIGYESKFC 240
           ADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGS       VGNG+ DKNMIG+ESKFC
Sbjct: 181 ADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGSVRNSERTVGNGVDDKNMIGFESKFC 222

Query: 241 CLAPLVSRNGSREREEDLKVVNGVS 259
           CL PLVSRNGSREREE+LKVVNGVS
Sbjct: 241 CLPPLVSRNGSREREEELKVVNGVS 222

[Close]

BLAST of Carg24274 vs. ExPASy TrEMBL
Match: A0A5A7UN11 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00290 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 1.5e-59
Identity = 145/274 (52.92%), Postives = 176/274 (64.23%), Query Frame = 0


Query: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60
           MG+CASL ++SECSAVK PPAP E++ D+FEIPPSPIKH+KLQ+N DS  KDISV+P+HH
Sbjct: 1   MGTCASLYNRSECSAVK-PPAPPETMTDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHH 60

Query: 61  KTPSGSILLR-SFLGFVFLSV-LFPPRHSW-IALFLQSVCSSQAAKKKPSLILERGWIPI 120
           KTPSG ILL   F+GFV  SV  FPP H +  ++   S   S    K+ +    R W+  
Sbjct: 61  KTPSGLILLSLFFMGFVLFSVSFFPPWHFFDCSVSFFSPWHSLTPLKEEAFFDSRAWL-- 120

Query: 121 VKISSVSKEIHKSQINDFTPSRDNTPIHHRFTAGTPRASQAGA---DDKPSTFNSSPLPT 180
                   E   S   DFTPS  NTP+HHRF A TPR S+  A   D++ S F+  PLP 
Sbjct: 121 ----DSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSKVSASSTDNELSNFSLPPLPP 180

Query: 181 KRRKKLADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGSVGNG----------IADKN 240
           KRRKKLADLFRESLG+E SFAFLN  +NRK DE  + GT SV N           + D+N
Sbjct: 181 KRRKKLADLFRESLGNEGSFAFLNDEENRKADEARVSGTDSVCNSERTAGEGMDQLVDEN 240

Query: 241 MIGYESKFCCLAPLVSRNGSREREEDLKVVNGVS 259
            +   SK CCL  LV    SRER+EDLK++NGVS
Sbjct: 241 PMELNSKMCCLPALV----SRERKEDLKLINGVS 263

[Close]

BLAST of Carg24274 vs. ExPASy TrEMBL
Match: A0A0A0LT18 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406740 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 2.5e-59
Identity = 140/271 (51.66%), Postives = 167/271 (61.62%), Query Frame = 0


Query: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60
           MG+CASL ++SECSAVK PPAP ++  D+FEIPPSPIKH+KLQ+N DS  KDISV+P+HH
Sbjct: 1   MGTCASLYNRSECSAVK-PPAPPQTTTDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHH 60

Query: 61  KTPSGSILLRSFLGFVFLSVLFPPRHSWIALFLQSVCSSQAAKKKPSLILERGWIPIVKI 120
           KTPSGS                                     K+ +    R W+     
Sbjct: 61  KTPSGS-------------------------------------KEEAFFDSRAWL----- 120

Query: 121 SSVSKEIHKSQINDFTPSRDNTPIHHRFTAGTPRASQ---AGADDKPSTFNSSPLPTKRR 180
                E   S   DFTPS  NTP+HHRF A TPR S+   A AD++ S FN  PLPTKRR
Sbjct: 121 -DSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSRVSVASADNEASNFNLPPLPTKRR 180

Query: 181 KKLADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGSV-------GNGI---ADKNMIG 240
           KKLADLFRESLG+EASFAFLN  +NRK DEP + GT SV       G+GI    D+N I 
Sbjct: 181 KKLADLFRESLGNEASFAFLNQEENRKADEPRVSGTDSVCNSERTAGDGINQLVDENPIE 227

Query: 241 YESKFCCLAPLVSRNGSREREEDLKVVNGVS 259
            +SK CCL PL SR+ SRER+EDLK++NGVS
Sbjct: 241 LDSKMCCLPPLASRSSSRERKEDLKLINGVS 227

[Close]

BLAST of Carg24274 vs. ExPASy TrEMBL
Match: A0A1S3B2S0 (uncharacterized protein LOC103485490 OS=Cucumis melo OX=3656 GN=LOC103485490 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 3.0e-52
Identity = 131/271 (48.34%), Postives = 158/271 (58.30%), Query Frame = 0


Query: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60
           MG+CASL ++SECSAVK PPAP E++ D+FEIPPSPIKH+KLQ+N DS  KDISV+P+HH
Sbjct: 1   MGTCASLYNRSECSAVK-PPAPPETMTDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHH 60

Query: 61  KTPSGSILLRSFLGFVFLSVLFPPRHSWIALFLQSVCSSQAAKKKPSLILERGWIPIVKI 120
           KTPSGS                                     K+ +    R W+     
Sbjct: 61  KTPSGS-------------------------------------KEEAFFDSRAWL----- 120

Query: 121 SSVSKEIHKSQINDFTPSRDNTPIHHRFTAGTPRASQAGA---DDKPSTFNSSPLPTKRR 180
                E   S   DFTPS  NTP+HHRF A TPR S+  A   D++ S F+  PLP KRR
Sbjct: 121 -DSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSKVSASSTDNELSNFSLPPLPPKRR 180

Query: 181 KKLADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGSVGNG----------IADKNMIG 240
           KKLADLFRESLG+E SFAFLN  +NRK DE  + GT SV N           + D+N + 
Sbjct: 181 KKLADLFRESLGNEGSFAFLNDEENRKADEARVSGTDSVCNSERTAGEGMDQLVDENPME 223

Query: 241 YESKFCCLAPLVSRNGSREREEDLKVVNGVS 259
             SK CCL  LV    SRER+EDLK++NGVS
Sbjct: 241 LNSKMCCLPALV----SRERKEDLKLINGVS 223

[Close]

BLAST of Carg24274 vs. TAIR 10
Match: AT3G01860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 66 Blast hits to 66 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 4.6e-05
Identity = 27/80 (33.75%), Postives = 40/80 (50.00%), Query Frame = 0


Query: 112 RGWIPIVKISSVSKEIHKSQINDFTPSRDNTPIHHRFTAGTPRASQAGADDKPSTFNSSP 171
           RGW     + S   +   S   +FTPSR  TP+HH+F   TP     G ++K        
Sbjct: 71  RGW-----LDSDCDDDFMSVGGEFTPSRGTTPVHHKFCDQTP---HQGEENKHGEEEEEA 130

Query: 172 LPTKRRKKLADLFRESLGDE 192
            PT  +K+L +LF+E+  +E
Sbjct: 131 SPTDNKKRLLELFKETQDEE 142

[Close]

BLAST of Carg24274 vs. TAIR 10
Match: AT3G01860.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 4.6e-05
Identity = 27/80 (33.75%), Postives = 40/80 (50.00%), Query Frame = 0


Query: 112 RGWIPIVKISSVSKEIHKSQINDFTPSRDNTPIHHRFTAGTPRASQAGADDKPSTFNSSP 171
           RGW     + S   +   S   +FTPSR  TP+HH+F   TP     G ++K        
Sbjct: 7   RGW-----LDSDCDDDFMSVGGEFTPSRGTTPVHHKFCDQTP---HQGEENKHGEEEEEA 66

Query: 172 LPTKRRKKLADLFRESLGDE 192
            PT  +K+L +LF+E+  +E
Sbjct: 67  SPTDNKKRLLELFKETQDEE 78

[Close]

BLAST of Carg24274 vs. TAIR 10
Match: AT3G27210.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40860.1); Has 133 Blast hits to 98 proteins in 25 species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 7; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 1.3e-04
Identity = 31/73 (42.47%), Postives = 41/73 (56.16%), Query Frame = 0


Query: 120 ISSVSKEIHKSQINDFTPSRDNTPIHHRFTAGTPR-ASQAGADDKPSTFNSSPLPTKRRK 179
           + S S +   S   DFTPS  NTP    F+   PR  +    + KPS  +SSP P  RRK
Sbjct: 92  LQSDSDDDFHSVNGDFTPSLGNTP-KSSFSDRPPRFHNLIFHEKKPSRGSSSPAPLPRRK 151

Query: 180 KLADLFRESLGDE 192
           KL +LFR+S+ +E
Sbjct: 152 KLGELFRDSIREE 163

The following BLAST results are available for this feature:

BLAST of Carg24274 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015955.1	1.8e-144	100.00	hypothetical protein SDJN02_21059, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022938376.1	2.5e-98	75.19	uncharacterized protein At3g27210-like [Cucurbita moschata]	[more]
KAG6578372.1	1.6e-92	70.57	hypothetical protein SDJN03_22820, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022992625.1	3.3e-90	69.43	uncharacterized protein LOC111488914 [Cucurbita maxima]	[more]
XP_023550243.1	9.7e-90	68.68	uncharacterized protein At3g27210-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg24274 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg24274 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FCZ7	1.2e-98	75.19	uncharacterized protein At3g27210-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1JW82	1.6e-90	69.43	uncharacterized protein LOC111488914 OS=Cucurbita maxima OX=3661 GN=LOC111488914...	[more]
A0A5A7UN11	1.5e-59	52.92	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LT18	2.5e-59	51.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406740 PE=4 SV=1	[more]
A0A1S3B2S0	3.0e-52	48.34	uncharacterized protein LOC103485490 OS=Cucumis melo OX=3656 GN=LOC103485490 PE=...	[more]

BLAST of Carg24274 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01860.1	4.6e-05	33.75	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT3G01860.2	4.6e-05	33.75	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT3G27210.1	1.3e-04	42.47	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..173
None	No IPR available	PANTHER	PTHR34280:SF13	SUBFAMILY NOT NAMED	coord: 133..205
IPR038947	At3g27210-like	PANTHER	PTHR34280	OS01G0920100 PROTEIN	coord: 133..205

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24274-RA	Carg24274-RA	mRNA