Carg24262 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24262
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic-like isoform X2
Location	Carg_Chr15: 575931 .. 579764 (+)
RNA-Seq Expression	Carg24262
Synteny	Carg24262

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAATGAGGCCCATGTATTGCTGCGTTTAGCGATTGTAAATCGCAAAGTTCGAAAAAGCAAGATGAAAATTGGTGGTGGAGTGGTCTGTGGAAGTCCACGCGCCGCCGTTCTACCCTCACTGCTCCTCGGCCGCCGTGGAGTCACTATACGCTGCTCTTCGTCTTCTTCGACTTCCGGTAAGTTCACCGCGAGCTAATTGTTCGCACATTTCCCTAATAGATTTTCAGTATCTTAATGCCTTTTTGAACCATCGCCGTGTTGCAGACCATGTATCATTCATCAAGGATGTTGCGGCAACTGAGCCTCCTCAGCATTTGTCTAATTTGTTGAAAATGCTGAAAACTAGAGGTATGTCGTTGGTCAAGCGCTTCAAATCATTCCTATCATGAATCTTATACCAATTAATCGCTAATACTTTAGAGTTTGCCCGATTGAATCCATCAATTTTGACCAGGCACTGAATTCTTCGTCCTTTAGAGTTGTTTACAAATTTTATTAGGAGTGTGAAGCTTGACACTCTAATTAGAATTGAAACAATAATGTCCTCGTGAATAGATTTCGATTCTATTGGCAATCCGGAGACCTAATTGCTTCTATCTCAACATTTTTATAAAACGATTAATAACCTGAGTTCTTGCTTCAATTTTCCTCTGTGGCATAAGTTTTTATTATTGTACGCTTAATCTATCGTTATGTATGCGTTTCTGCAATATATTGGGCTTGTTTGTTCCTTTATTTTTCCTTCTTGAACTTCATTCCATGTTCTATTTTCTGAAAATTATATGCTGAGTCATGTCATGCCTATCTGCATCCCCAATGGTTCTATCAGCTTCTTTGCATTTTCCTCTGCTCTATAAAATGTTGCATTGGCTTTTCTTATACTAGTAAATACTAAAAATAACTATAGAATTATACAACCAATTATAGGCCTGAATTGCCACATTTTTTGAACCTGCAGACATATTCTTATCTACACGGGAATCTCCTGTAAATTGTTGGTTTTAAGCAGGTGAATCCATAATTTCTCCTGGAGCCAAGCAAGGAATTATTCCTCTTGCCATTCCACTGGCAAAAAACAGCTCAGGTATTATGTTAGAATTTTTCATTCAAATTGGTTTGCGTTATAGGTGTATGATATCTCAATCTATTCTTTGTTCTTGTTCCAAGGTACTATAACTGCATTGCTGCGCTGGCCAACAGCACCCGCTGGGTAATAAGAATAAACTTTTTACATTTTCTTATGGGTGCTTCATCCTCCATCTTAATAAACTTCTATCCTCAGGATGGAAATGCCAGTAGTAGACGTCAATAGGAATGGAGTGTGGCTACTTGCCAAGAACGTAAGTGAAGCATCTATTTTGCAATTGTTTCCGATTTTTCAATGTTCTAAAACTATTTCCTTAGACACTCTGATACAGAATTCAGTTCTCTGTTGTGCAGGTGGATCAATTTATTCACAGACTTCTAGTGGAAGAAGATGCCAAAGGAAGTGGAGAGCTAAATGATGAGCTATTTCTTGCAGCAGCTGATGCTGGGCAGAAACTTTATGAAAGGGGTGATTTTGCTGAATCTCAGATCAAAAACATTGATGGGTATTTGCTGAAAAAGGTATTCTACAATTTCTCATGGTGCTTCTCTTGATTGTCCCCATCAACGTAAAATTTTGTATACAAGTGTTTTCTTAAATGTGGCGAGGCGTTTCCTTGTTGTGACAGGCAAGTTGGTTGTGCTCCTTGACAAAGCCGCTTGCCTTGATCATCACCTTTTTGGGGTCTCTCTAAAGAAACAGAATTTTCAGTTCTCTGATGTCTTTAGACTTCAGAATCTTCTTCTCCATGCGTCTTGAAAATAAAAGAGAATTTTTTATGTAAAAAATATTTTTATGCATAAACAGGTATCTTTAAAGTGTATTTAAGTAATATATTTTATCTTCTGTACTGCTATCTTGTTGCTGAAGAAGTAACATTTTTGCATAATGCATTTTGTGCTGGCATTATAGCCTTCAATTAGAATTTTCCTCTTTTCTTTTCTTTTTCCTGTTTTAAGTCTCACATCACACACGTTATACTTCTTAAGCACATTTTGGGTGAACACAATAAAAAAAAAAGGTTTAAATCATCTGCAATGATGTATCTTGCAGTGCCAGGTCTGACAATCTTTCAATCTCAGGTTGGGATATTTCCAGATATCATAGAACGTAAAATATTGCGCCATTTTGAAGAAGGCGACCTTGTAAGGCTGTCCTTTATGAAATACTGAAAGCAGTGAGTGAAAGAAGCTTTGACTCCATTTACGCACTTGAATATCTTTACCTGCTTGTGTAGGTTTCAGCTTTGGTGACCGGAGAATTCTATACTAAAAAGGAGCACTTCCCGGGATTTGCACGGCCATATGTATTTAATGCAGAGGTTTTGCTGAAGTATGTGGGGAATTTTTTTCATCACTCCAAAAATGCTTTGGCTGAGAATGTACCTAAAGAATCTGTGCTTTCTTCATGCTTCAGGGTGGGGCGTAAAACAGAAGCAAAGGATGCTGCGAGGGGAGCGTTAAAATCACCATGGTGGACCCTAGGCTGTAAGTATGAGGTATTGACTTTCTGGTTGATCTCTTTTGCCTTTTTCTTAATAGCTCTCTGTTTTAAGCCGCTTGCCTTGGGAGAGGTGGGGAAAGATAAAGCAAAGAATACTTTAAAAAAGTTGATCCTTGAGTTGGTTTTGGCTCATATTCAGGAAGTTGCTAATATCGCTCAATGGGAAGATGAACAAATTGAGTATTTGAAAGAGAAGGTCACAGAAGAAGGAAAGCTAGAAGACCTCAAAAAGGGAAAGGCTCCTGCCCAGGTTTTTCACTGTTCTTTATGGATTACTTAAAAATTATCAAGCAGACAAACATGAATTAGAACAGGTTATTTTGTCAAAACTACCCTTTGCATATGAACATTTTCATGTGTGTTGAGTGTCCATTTGATAACCATTTGATTTTTTGTTTTTGCTAATTAAGCTATAAATATTACATCCACCTGTGGATTTCTTTGTTTTGTTATCTACTTCTCACCTGTGTTTTAAAAAACTAACCCAAGTTTTGAAAACTAAAAATAGTAATGTTCAAATAATAGTTTTTGTTTTTGAAATTTGGTTAAGAATTCAAAAGTTTTCTTAGGAAAGATGAAACCTATCATAGAGAAATGATGAGAAAACAAGTACAATTTTCAGAAATTGACCGGGTCTAAACTAAACAAGTGGGTAATCTGTGTCTATGTCTTTCATATTAATAATCTATTTTCATTTTTAAGTTTAAACTCCTTTCAATATGTTGACAATACTACTGTTGAAACATTAAAACTAAACGAAAAATCTAGACTGAAGATCAATTTTAAACCAAGAAATATCATTTAGTAGCCTAAAAAATTACTTCTACAAATTTTGTTACTGGCTTGTGCACTGCAGGTTGCCTTGGATCAAGCTGCCTTTTTGTTGGATTTAGCTTCGGTTGATGGGACTTGGGACATCTCTGTGGAGCGTATTGCTCAATGTTATGAAGAGGCTGGCCTTCAGGAGATTGCGAGATTCGTACTTTACAGAGACTGAATACAAACAGAGGCATTTTTCTTCTCTACACTCTTCATTTTCATTGTCTTCTTCCTTCTGGCTATATAATTATATCTGTATTTCTTCATTGTGTAAACATCATTCTTTTTCTCTCCCCTATGGATGAGACGATCCATTCCCTACAAGAATCGGTATACTGAGGGACAAGGAATACTCAAAGTTTCTCTTGATAAATTATAATGGTTTTTTCTAAAGCATATAAGAAATGTCAGAGAAATGTGTTTG

mRNA sequence

TCAATGAGGCCCATGTATTGCTGCGTTTAGCGATTGTAAATCGCAAAGTTCGAAAAAGCAAGATGAAAATTGGTGGTGGAGTGGTCTGTGGAAGTCCACGCGCCGCCGTTCTACCCTCACTGCTCCTCGGCCGCCGTGGAGTCACTATACGCTGCTCTTCGTCTTCTTCGACTTCCGACCATGTATCATTCATCAAGGATGTTGCGGCAACTGAGCCTCCTCAGCATTTGTCTAATTTGTTGAAAATGCTGAAAACTAGAGGTGAATCCATAATTTCTCCTGGAGCCAAGCAAGGAATTATTCCTCTTGCCATTCCACTGGCAAAAAACAGCTCAGGTACTATAACTGCATTGCTGCGCTGGCCAACAGCACCCGCTGGGATGGAAATGCCAGTAGTAGACGTCAATAGGAATGGAGTGTGGCTACTTGCCAAGAACGTGGATCAATTTATTCACAGACTTCTAGTGGAAGAAGATGCCAAAGGAAGTGGAGAGCTAAATGATGAGCTATTTCTTGCAGCAGCTGATGCTGGGCAGAAACTTTATGAAAGGGGTGATTTTGCTGAATCTCAGATCAAAAACATTGATGGGTATTTGCTGAAAAAGGTTGGGATATTTCCAGATATCATAGAACGTAAAATATTGCGCCATTTTGAAGAAGGCGACCTTGTTTCAGCTTTGGTGACCGGAGAATTCTATACTAAAAAGGAGCACTTCCCGGGATTTGCACGGCCATATGTATTTAATGCAGAGGTTTTGCTGAAGGTGGGGCGTAAAACAGAAGCAAAGGATGCTGCGAGGGGAGCGTTAAAATCACCATGGTGGACCCTAGGCTGTAAGTATGAGGAAGTTGCTAATATCGCTCAATGGGAAGATGAACAAATTGAGTATTTGAAAGAGAAGGTCACAGAAGAAGGAAAGCTAGAAGACCTCAAAAAGGGAAAGGCTCCTGCCCAGGTTGCCTTGGATCAAGCTGCCTTTTTGTTGGATTTAGCTTCGGTTGATGGGACTTGGGACATCTCTGTGGAGCGTATTGCTCAATGTTATGAAGAGGCTGGCCTTCAGGAGATTGCGAGATTCGTACTTTACAGAGACTGAATACAAACAGAGGCATTTTTCTTCTCTACACTCTTCATTTTCATTGTCTTCTTCCTTCTGGCTATATAATTATATCTGTATTTCTTCATTGTGTAAACATCATTCTTTTTCTCTCCCCTATGGATGAGACGATCCATTCCCTACAAGAATCGGTATACTGAGGGACAAGGAATACTCAAAGTTTCTCTTGATAAATTATAATGGTTTTTTCTAAAGCATATAAGAAATGTCAGAGAAATGTGTTTG

Coding sequence (CDS)

ATGAAAATTGGTGGTGGAGTGGTCTGTGGAAGTCCACGCGCCGCCGTTCTACCCTCACTGCTCCTCGGCCGCCGTGGAGTCACTATACGCTGCTCTTCGTCTTCTTCGACTTCCGACCATGTATCATTCATCAAGGATGTTGCGGCAACTGAGCCTCCTCAGCATTTGTCTAATTTGTTGAAAATGCTGAAAACTAGAGGTGAATCCATAATTTCTCCTGGAGCCAAGCAAGGAATTATTCCTCTTGCCATTCCACTGGCAAAAAACAGCTCAGGTACTATAACTGCATTGCTGCGCTGGCCAACAGCACCCGCTGGGATGGAAATGCCAGTAGTAGACGTCAATAGGAATGGAGTGTGGCTACTTGCCAAGAACGTGGATCAATTTATTCACAGACTTCTAGTGGAAGAAGATGCCAAAGGAAGTGGAGAGCTAAATGATGAGCTATTTCTTGCAGCAGCTGATGCTGGGCAGAAACTTTATGAAAGGGGTGATTTTGCTGAATCTCAGATCAAAAACATTGATGGGTATTTGCTGAAAAAGGTTGGGATATTTCCAGATATCATAGAACGTAAAATATTGCGCCATTTTGAAGAAGGCGACCTTGTTTCAGCTTTGGTGACCGGAGAATTCTATACTAAAAAGGAGCACTTCCCGGGATTTGCACGGCCATATGTATTTAATGCAGAGGTTTTGCTGAAGGTGGGGCGTAAAACAGAAGCAAAGGATGCTGCGAGGGGAGCGTTAAAATCACCATGGTGGACCCTAGGCTGTAAGTATGAGGAAGTTGCTAATATCGCTCAATGGGAAGATGAACAAATTGAGTATTTGAAAGAGAAGGTCACAGAAGAAGGAAAGCTAGAAGACCTCAAAAAGGGAAAGGCTCCTGCCCAGGTTGCCTTGGATCAAGCTGCCTTTTTGTTGGATTTAGCTTCGGTTGATGGGACTTGGGACATCTCTGTGGAGCGTATTGCTCAATGTTATGAAGAGGCTGGCCTTCAGGAGATTGCGAGATTCGTACTTTACAGAGACTGA

Protein sequence

MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCSSSSSTSDHVSFIKDVAATEPPQHLSNLLKMLKTRGESIISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVWLLAKNVDQFIHRLLVEEDAKGSGELNDELFLAAADAGQKLYERGDFAESQIKNIDGYLLKKVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTEAKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVALDQAAFLLDLASVDGTWDISVERIAQCYEEAGLQEIARFVLYRD

Homology

[Close]

BLAST of Carg24262 vs. NCBI nr
Match: KAG7015967.1 (hypothetical protein SDJN02_21071 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 683.7 bits (1763), Expect = 8.1e-193
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0


Query: 1   MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCSSSSSTSDHVSFIKDVAATEPPQHLSNLL 60
           MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCSSSSSTSDHVSFIKDVAATEPPQHLSNLL
Sbjct: 1   MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCSSSSSTSDHVSFIKDVAATEPPQHLSNLL 60

Query: 61  KMLKTRGESIISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVW 120
           KMLKTRGESIISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVW
Sbjct: 61  KMLKTRGESIISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVW 120

Query: 121 LLAKNVDQFIHRLLVEEDAKGSGELNDELFLAAADAGQKLYERGDFAESQIKNIDGYLLK 180
           LLAKNVDQFIHRLLVEEDAKGSGELNDELFLAAADAGQKLYERGDFAESQIKNIDGYLLK
Sbjct: 121 LLAKNVDQFIHRLLVEEDAKGSGELNDELFLAAADAGQKLYERGDFAESQIKNIDGYLLK 180

Query: 181 KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTE 240
           KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTE
Sbjct: 181 KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTE 240

Query: 241 AKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVA 300
           AKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVA
Sbjct: 241 AKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVA 300

Query: 301 LDQAAFLLDLASVDGTWDISVERIAQCYEEAGLQEIARFVLYRD 345
           LDQAAFLLDLASVDGTWDISVERIAQCYEEAGLQEIARFVLYRD
Sbjct: 301 LDQAAFLLDLASVDGTWDISVERIAQCYEEAGLQEIARFVLYRD 344

[Close]

BLAST of Carg24262 vs. NCBI nr
Match: XP_023533903.1 (uncharacterized protein LOC111795609 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 681.4 bits (1757), Expect = 4.0e-192
Identity = 343/344 (99.71%), Postives = 343/344 (99.71%), Query Frame = 0


Query: 1   MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCSSSSSTSDHVSFIKDVAATEPPQHLSNLL 60
           MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCSSSSSTSDHVSFIKDVAATEPPQHLSNLL
Sbjct: 1   MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCSSSSSTSDHVSFIKDVAATEPPQHLSNLL 60

Query: 61  KMLKTRGESIISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVW 120
           KMLKTRGESIISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVW
Sbjct: 61  KMLKTRGESIISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVW 120

Query: 121 LLAKNVDQFIHRLLVEEDAKGSGELNDELFLAAADAGQKLYERGDFAESQIKNIDGYLLK 180
           LLAKNVDQFIHRLLVEEDAKGSGE NDELFLAAADAGQKLYERGDFAESQIKNIDGYLLK
Sbjct: 121 LLAKNVDQFIHRLLVEEDAKGSGEQNDELFLAAADAGQKLYERGDFAESQIKNIDGYLLK 180

Query: 181 KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTE 240
           KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTE
Sbjct: 181 KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTE 240

Query: 241 AKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVA 300
           AKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVA
Sbjct: 241 AKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVA 300

Query: 301 LDQAAFLLDLASVDGTWDISVERIAQCYEEAGLQEIARFVLYRD 345
           LDQAAFLLDLASVDGTWDISVERIAQCYEEAGLQEIARFVLYRD
Sbjct: 301 LDQAAFLLDLASVDGTWDISVERIAQCYEEAGLQEIARFVLYRD 344

[Close]

BLAST of Carg24262 vs. NCBI nr
Match: XP_022946992.1 (uncharacterized protein LOC111451004 isoform X2 [Cucurbita moschata])

HSP 1 Score: 674.1 bits (1738), Expect = 6.4e-190
Identity = 338/344 (98.26%), Postives = 341/344 (99.13%), Query Frame = 0


Query: 1   MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCSSSSSTSDHVSFIKDVAATEPPQHLSNLL 60
           MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCSSSSST DHVSFIKDVAATEPPQHLSNLL
Sbjct: 1   MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCSSSSSTPDHVSFIKDVAATEPPQHLSNLL 60

Query: 61  KMLKTRGESIISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVW 120
           KMLKTRGESIISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVW
Sbjct: 61  KMLKTRGESIISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVW 120

Query: 121 LLAKNVDQFIHRLLVEEDAKGSGELNDELFLAAADAGQKLYERGDFAESQIKNIDGYLLK 180
           LLAKNVDQFIHRLLVEEDAKGSGE NDELFLAAADAGQKLYERGD AESQIKNIDGYLLK
Sbjct: 121 LLAKNVDQFIHRLLVEEDAKGSGEQNDELFLAAADAGQKLYERGDLAESQIKNIDGYLLK 180

Query: 181 KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTE 240
           KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTE
Sbjct: 181 KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTE 240

Query: 241 AKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVA 300
           AKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVA
Sbjct: 241 AKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVA 300

Query: 301 LDQAAFLLDLASVDGTWDISVERIAQCYEEAGLQEIARFVLYRD 345
           LDQAAFLLDLASVDGTWD+SVERIAQCYEEAGLQE+ARFVL+RD
Sbjct: 301 LDQAAFLLDLASVDGTWDMSVERIAQCYEEAGLQEVARFVLFRD 344

[Close]

BLAST of Carg24262 vs. NCBI nr
Match: XP_023007379.1 (uncharacterized protein LOC111499892 [Cucurbita maxima] >XP_023007380.1 uncharacterized protein LOC111499892 [Cucurbita maxima] >XP_023007381.1 uncharacterized protein LOC111499892 [Cucurbita maxima])

HSP 1 Score: 670.6 bits (1729), Expect = 7.1e-189
Identity = 337/343 (98.25%), Postives = 341/343 (99.42%), Query Frame = 0


Query: 1   MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCSSSSSTSDHVSFIKDVAATEPPQHLSNLL 60
           MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRC+SSSSTS+HVSFIKDVAATEPPQHLSNLL
Sbjct: 1   MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCASSSSTSNHVSFIKDVAATEPPQHLSNLL 60

Query: 61  KMLKTRGESIISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVW 120
           KMLKTRGESIISPGAKQGIIPLAIPLAKN+SGTITALLRWPTAPAGMEMPVVDVNRNGVW
Sbjct: 61  KMLKTRGESIISPGAKQGIIPLAIPLAKNNSGTITALLRWPTAPAGMEMPVVDVNRNGVW 120

Query: 121 LLAKNVDQFIHRLLVEEDAKGSGELNDELFLAAADAGQKLYERGDFAESQIKNIDGYLLK 180
           LLAKNVDQFIHRLLVEEDAKGSGE NDELFLAAADAG+KLY RGDFAESQIKNIDGYLLK
Sbjct: 121 LLAKNVDQFIHRLLVEEDAKGSGEQNDELFLAAADAGKKLYVRGDFAESQIKNIDGYLLK 180

Query: 181 KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTE 240
           KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTE
Sbjct: 181 KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTE 240

Query: 241 AKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVA 300
           AKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVA
Sbjct: 241 AKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVA 300

Query: 301 LDQAAFLLDLASVDGTWDISVERIAQCYEEAGLQEIARFVLYR 344
           LDQAAFLLDLASVDGTWDISVERIAQCYEEAGLQEIARFVLYR
Sbjct: 301 LDQAAFLLDLASVDGTWDISVERIAQCYEEAGLQEIARFVLYR 343

[Close]

BLAST of Carg24262 vs. NCBI nr
Match: XP_022946988.1 (uncharacterized protein LOC111451004 isoform X1 [Cucurbita moschata] >XP_022946990.1 uncharacterized protein LOC111451004 isoform X1 [Cucurbita moschata] >XP_022946991.1 uncharacterized protein LOC111451004 isoform X1 [Cucurbita moschata])

HSP 1 Score: 659.1 bits (1699), Expect = 2.1e-185
Identity = 338/372 (90.86%), Postives = 341/372 (91.67%), Query Frame = 0


Query: 1   MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCSSSSSTSDHVSFIKDVAATEPPQHLSNLL 60
           MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCSSSSST DHVSFIKDVAATEPPQHLSNLL
Sbjct: 1   MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCSSSSSTPDHVSFIKDVAATEPPQHLSNLL 60

Query: 61  KMLKTRGESIISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVW 120
           KMLKTRGESIISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVW
Sbjct: 61  KMLKTRGESIISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVW 120

Query: 121 LLAKNVDQFIHRLLVEEDAKGSGELNDELFLAAADAGQKLYERGDFAESQIKNIDGYLLK 180
           LLAKNVDQFIHRLLVEEDAKGSGE NDELFLAAADAGQKLYERGD AESQIKNIDGYLLK
Sbjct: 121 LLAKNVDQFIHRLLVEEDAKGSGEQNDELFLAAADAGQKLYERGDLAESQIKNIDGYLLK 180

Query: 181 KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLK------ 240
           KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLK      
Sbjct: 181 KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKYVGNFF 240

Query: 241 ----------------------VGRKTEAKDAARGALKSPWWTLGCKYEEVANIAQWEDE 300
                                 VGRKTEAKDAARGALKSPWWTLGCKYEEVANIAQWEDE
Sbjct: 241 HHSKNALAENVPKESVLSSCFRVGRKTEAKDAARGALKSPWWTLGCKYEEVANIAQWEDE 300

Query: 301 QIEYLKEKVTEEGKLEDLKKGKAPAQVALDQAAFLLDLASVDGTWDISVERIAQCYEEAG 345
           QIEYLKEKVTEEGKLEDLKKGKAPAQVALDQAAFLLDLASVDGTWD+SVERIAQCYEEAG
Sbjct: 301 QIEYLKEKVTEEGKLEDLKKGKAPAQVALDQAAFLLDLASVDGTWDMSVERIAQCYEEAG 360

[Close]

BLAST of Carg24262 vs. ExPASy Swiss-Prot
Match: Q94JY0 (Protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAB PE=1 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 2.5e-128
Identity = 230/335 (68.66%), Postives = 279/335 (83.28%), Query Frame = 0


Query: 10  GSPRAAVLPSLLLGRRGVTIRCSSSSSTSDHVSFIKDVAATEPPQHLSNLLKMLKTRGES 69
           GS    + PS  L  R    R S  S  S HVSFIKDVAATEPP HL +LLK+L+TRGE+
Sbjct: 2   GSISMHITPSTALPIRHFRARVSCCS--SGHVSFIKDVAATEPPMHLHHLLKVLQTRGET 61

Query: 70  IISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVWLLAKNVDQF 129
           IISPGAKQG+IPLAIPL+KNSSG++TALLRWPTAP GM+MPVV+V R+GV L+A+NVD++
Sbjct: 62  IISPGAKQGLIPLAIPLSKNSSGSVTALLRWPTAPPGMDMPVVEVWRSGVRLIARNVDEY 121

Query: 130 IHRLLVEEDAKGSGELNDELFLAAADAGQKLYERGDFAESQIKNIDGYLLKKVGIFPDII 189
           IHR+LVEEDA+   EL  EL+ A+ +AG+KLYE+G FAES+I N+D Y+LKKVG+FPD++
Sbjct: 122 IHRILVEEDAQ---ELT-ELYRASGEAGEKLYEKGAFAESEIDNLDVYVLKKVGLFPDLL 181

Query: 190 ERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTEAKDAARGAL 249
           ERK+LRHF+EGD VSA+VTGEFYTKK+ FPGF RP+V+ A +L KVGR  EAKDAAR AL
Sbjct: 182 ERKVLRHFDEGDHVSAMVTGEFYTKKDLFPGFGRPFVYYANILQKVGRNVEAKDAARVAL 241

Query: 250 KSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVALDQAAFLLD 309
           +SPWWTLGC YEEVA+IAQWEDEQIE+++EKV++EG+ EDL KGKAP QVALD AAFLLD
Sbjct: 242 RSPWWTLGCPYEEVASIAQWEDEQIEFIREKVSDEGRFEDLHKGKAPIQVALDVAAFLLD 301

Query: 310 LASVDGTWDISVERIAQCYEEAGLQEIARFVLYRD 345
           LAS++GTW  S+  IA+CYEEAGL  I+ FVLY D
Sbjct: 302 LASIEGTWSESLNHIAKCYEEAGLHHISNFVLYTD 330

[Close]

BLAST of Carg24262 vs. ExPASy TrEMBL
Match: A0A6J1G585 (uncharacterized protein LOC111451004 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451004 PE=4 SV=1)

HSP 1 Score: 674.1 bits (1738), Expect = 3.1e-190
Identity = 338/344 (98.26%), Postives = 341/344 (99.13%), Query Frame = 0


Query: 1   MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCSSSSSTSDHVSFIKDVAATEPPQHLSNLL 60
           MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCSSSSST DHVSFIKDVAATEPPQHLSNLL
Sbjct: 1   MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCSSSSSTPDHVSFIKDVAATEPPQHLSNLL 60

Query: 61  KMLKTRGESIISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVW 120
           KMLKTRGESIISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVW
Sbjct: 61  KMLKTRGESIISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVW 120

Query: 121 LLAKNVDQFIHRLLVEEDAKGSGELNDELFLAAADAGQKLYERGDFAESQIKNIDGYLLK 180
           LLAKNVDQFIHRLLVEEDAKGSGE NDELFLAAADAGQKLYERGD AESQIKNIDGYLLK
Sbjct: 121 LLAKNVDQFIHRLLVEEDAKGSGEQNDELFLAAADAGQKLYERGDLAESQIKNIDGYLLK 180

Query: 181 KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTE 240
           KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTE
Sbjct: 181 KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTE 240

Query: 241 AKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVA 300
           AKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVA
Sbjct: 241 AKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVA 300

Query: 301 LDQAAFLLDLASVDGTWDISVERIAQCYEEAGLQEIARFVLYRD 345
           LDQAAFLLDLASVDGTWD+SVERIAQCYEEAGLQE+ARFVL+RD
Sbjct: 301 LDQAAFLLDLASVDGTWDMSVERIAQCYEEAGLQEVARFVLFRD 344

[Close]

BLAST of Carg24262 vs. ExPASy TrEMBL
Match: A0A6J1L0D2 (uncharacterized protein LOC111499892 OS=Cucurbita maxima OX=3661 GN=LOC111499892 PE=4 SV=1)

HSP 1 Score: 670.6 bits (1729), Expect = 3.4e-189
Identity = 337/343 (98.25%), Postives = 341/343 (99.42%), Query Frame = 0


Query: 1   MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCSSSSSTSDHVSFIKDVAATEPPQHLSNLL 60
           MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRC+SSSSTS+HVSFIKDVAATEPPQHLSNLL
Sbjct: 1   MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCASSSSTSNHVSFIKDVAATEPPQHLSNLL 60

Query: 61  KMLKTRGESIISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVW 120
           KMLKTRGESIISPGAKQGIIPLAIPLAKN+SGTITALLRWPTAPAGMEMPVVDVNRNGVW
Sbjct: 61  KMLKTRGESIISPGAKQGIIPLAIPLAKNNSGTITALLRWPTAPAGMEMPVVDVNRNGVW 120

Query: 121 LLAKNVDQFIHRLLVEEDAKGSGELNDELFLAAADAGQKLYERGDFAESQIKNIDGYLLK 180
           LLAKNVDQFIHRLLVEEDAKGSGE NDELFLAAADAG+KLY RGDFAESQIKNIDGYLLK
Sbjct: 121 LLAKNVDQFIHRLLVEEDAKGSGEQNDELFLAAADAGKKLYVRGDFAESQIKNIDGYLLK 180

Query: 181 KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTE 240
           KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTE
Sbjct: 181 KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTE 240

Query: 241 AKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVA 300
           AKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVA
Sbjct: 241 AKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVA 300

Query: 301 LDQAAFLLDLASVDGTWDISVERIAQCYEEAGLQEIARFVLYR 344
           LDQAAFLLDLASVDGTWDISVERIAQCYEEAGLQEIARFVLYR
Sbjct: 301 LDQAAFLLDLASVDGTWDISVERIAQCYEEAGLQEIARFVLYR 343

[Close]

BLAST of Carg24262 vs. ExPASy TrEMBL
Match: A0A6J1G5K1 (uncharacterized protein LOC111451004 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451004 PE=4 SV=1)

HSP 1 Score: 659.1 bits (1699), Expect = 1.0e-185
Identity = 338/372 (90.86%), Postives = 341/372 (91.67%), Query Frame = 0


Query: 1   MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCSSSSSTSDHVSFIKDVAATEPPQHLSNLL 60
           MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCSSSSST DHVSFIKDVAATEPPQHLSNLL
Sbjct: 1   MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCSSSSSTPDHVSFIKDVAATEPPQHLSNLL 60

Query: 61  KMLKTRGESIISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVW 120
           KMLKTRGESIISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVW
Sbjct: 61  KMLKTRGESIISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVW 120

Query: 121 LLAKNVDQFIHRLLVEEDAKGSGELNDELFLAAADAGQKLYERGDFAESQIKNIDGYLLK 180
           LLAKNVDQFIHRLLVEEDAKGSGE NDELFLAAADAGQKLYERGD AESQIKNIDGYLLK
Sbjct: 121 LLAKNVDQFIHRLLVEEDAKGSGEQNDELFLAAADAGQKLYERGDLAESQIKNIDGYLLK 180

Query: 181 KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLK------ 240
           KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLK      
Sbjct: 181 KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKYVGNFF 240

Query: 241 ----------------------VGRKTEAKDAARGALKSPWWTLGCKYEEVANIAQWEDE 300
                                 VGRKTEAKDAARGALKSPWWTLGCKYEEVANIAQWEDE
Sbjct: 241 HHSKNALAENVPKESVLSSCFRVGRKTEAKDAARGALKSPWWTLGCKYEEVANIAQWEDE 300

Query: 301 QIEYLKEKVTEEGKLEDLKKGKAPAQVALDQAAFLLDLASVDGTWDISVERIAQCYEEAG 345
           QIEYLKEKVTEEGKLEDLKKGKAPAQVALDQAAFLLDLASVDGTWD+SVERIAQCYEEAG
Sbjct: 301 QIEYLKEKVTEEGKLEDLKKGKAPAQVALDQAAFLLDLASVDGTWDMSVERIAQCYEEAG 360

[Close]

BLAST of Carg24262 vs. ExPASy TrEMBL
Match: A0A0A0LJE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G279220 PE=4 SV=1)

HSP 1 Score: 644.0 bits (1660), Expect = 3.5e-181
Identity = 322/344 (93.60%), Postives = 330/344 (95.93%), Query Frame = 0


Query: 1   MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCSSSSSTSDHVSFIKDVAATEPPQHLSNLL 60
           MKIGGGVVCGSPRAA LPSLLL RRGVT+RCS+SSSTSDHVSFIKDVAATEPPQHL +LL
Sbjct: 1   MKIGGGVVCGSPRAAALPSLLLRRRGVTVRCSTSSSTSDHVSFIKDVAATEPPQHLFHLL 60

Query: 61  KMLKTRGESIISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVW 120
           KMLKTRG SIISPGAKQGIIPL +PLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVW
Sbjct: 61  KMLKTRGASIISPGAKQGIIPLVVPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVW 120

Query: 121 LLAKNVDQFIHRLLVEEDAKGSGELNDELFLAAADAGQKLYERGDFAESQIKNIDGYLLK 180
           LLAKNVDQFIHRLLVEEDA+GSGE NDELFLAAADAGQKLY RGDF+ESQI N+DGYLLK
Sbjct: 121 LLAKNVDQFIHRLLVEEDARGSGEQNDELFLAAADAGQKLYGRGDFSESQITNLDGYLLK 180

Query: 181 KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTE 240
           KVG+FPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTE
Sbjct: 181 KVGLFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTE 240

Query: 241 AKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVA 300
           AKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEY KEKVTEEGK EDLKKGKAPAQVA
Sbjct: 241 AKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEYFKEKVTEEGKQEDLKKGKAPAQVA 300

Query: 301 LDQAAFLLDLASVDGTWDISVERIAQCYEEAGLQEIARFVLYRD 345
           LDQAAFLLDLASVDGTWD  VERIAQCYEEAGL EIA FVLYRD
Sbjct: 301 LDQAAFLLDLASVDGTWDNYVERIAQCYEEAGLLEIATFVLYRD 344

[Close]

BLAST of Carg24262 vs. ExPASy TrEMBL
Match: A0A5D3BJN5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00800 PE=4 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.3e-180
Identity = 319/344 (92.73%), Postives = 330/344 (95.93%), Query Frame = 0


Query: 1   MKIGGGVVCGSPRAAVLPSLLLGRRGVTIRCSSSSSTSDHVSFIKDVAATEPPQHLSNLL 60
           MKIGGGVVCGSPRAA LPSLLL RRGVT+RCS+SSST+DHVSFIKDVAATEPPQHL +LL
Sbjct: 1   MKIGGGVVCGSPRAAALPSLLLRRRGVTVRCSTSSSTADHVSFIKDVAATEPPQHLFHLL 60

Query: 61  KMLKTRGESIISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVW 120
           KMLKTRG SIISPGAKQGIIPL +PLAKNS+GTITALLRWPTAPAGMEMPVVDVNRNGVW
Sbjct: 61  KMLKTRGASIISPGAKQGIIPLVVPLAKNSTGTITALLRWPTAPAGMEMPVVDVNRNGVW 120

Query: 121 LLAKNVDQFIHRLLVEEDAKGSGELNDELFLAAADAGQKLYERGDFAESQIKNIDGYLLK 180
           LLAKNVDQFIHRLLVEEDA+GSGE NDELFLAAADAGQKLY RGDF+ESQI N+DGYLLK
Sbjct: 121 LLAKNVDQFIHRLLVEEDARGSGEQNDELFLAAADAGQKLYGRGDFSESQITNLDGYLLK 180

Query: 181 KVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTE 240
           KVG+FPD+IERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTE
Sbjct: 181 KVGLFPDVIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTE 240

Query: 241 AKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVA 300
           AKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEY KEKVTEEGK EDLKKGKAPAQVA
Sbjct: 241 AKDAARGALKSPWWTLGCKYEEVANIAQWEDEQIEYFKEKVTEEGKQEDLKKGKAPAQVA 300

Query: 301 LDQAAFLLDLASVDGTWDISVERIAQCYEEAGLQEIARFVLYRD 345
           LDQAAFLLDLASVDGTWD  VERIAQCYEEAGL EIA FVLYRD
Sbjct: 301 LDQAAFLLDLASVDGTWDNYVERIAQCYEEAGLHEIATFVLYRD 344

[Close]

BLAST of Carg24262 vs. TAIR 10
Match: AT4G34090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23370.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 459.9 bits (1182), Expect = 1.8e-129
Identity = 230/335 (68.66%), Postives = 279/335 (83.28%), Query Frame = 0


Query: 10  GSPRAAVLPSLLLGRRGVTIRCSSSSSTSDHVSFIKDVAATEPPQHLSNLLKMLKTRGES 69
           GS    + PS  L  R    R S  S  S HVSFIKDVAATEPP HL +LLK+L+TRGE+
Sbjct: 2   GSISMHITPSTALPIRHFRARVSCCS--SGHVSFIKDVAATEPPMHLHHLLKVLQTRGET 61

Query: 70  IISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVWLLAKNVDQF 129
           IISPGAKQG+IPLAIPL+KNSSG++TALLRWPTAP GM+MPVV+V R+GV L+A+NVD++
Sbjct: 62  IISPGAKQGLIPLAIPLSKNSSGSVTALLRWPTAPPGMDMPVVEVWRSGVRLIARNVDEY 121

Query: 130 IHRLLVEEDAKGSGELNDELFLAAADAGQKLYERGDFAESQIKNIDGYLLKKVGIFPDII 189
           IHR+LVEEDA+   EL  EL+ A+ +AG+KLYE+G FAES+I N+D Y+LKKVG+FPD++
Sbjct: 122 IHRILVEEDAQ---ELT-ELYRASGEAGEKLYEKGAFAESEIDNLDVYVLKKVGLFPDLL 181

Query: 190 ERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTEAKDAARGAL 249
           ERK+LRHF+EGD VSA+VTGEFYTKK+ FPGF RP+V+ A +L KVGR  EAKDAAR AL
Sbjct: 182 ERKVLRHFDEGDHVSAMVTGEFYTKKDLFPGFGRPFVYYANILQKVGRNVEAKDAARVAL 241

Query: 250 KSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVALDQAAFLLD 309
           +SPWWTLGC YEEVA+IAQWEDEQIE+++EKV++EG+ EDL KGKAP QVALD AAFLLD
Sbjct: 242 RSPWWTLGCPYEEVASIAQWEDEQIEFIREKVSDEGRFEDLHKGKAPIQVALDVAAFLLD 301

Query: 310 LASVDGTWDISVERIAQCYEEAGLQEIARFVLYRD 345
           LAS++GTW  S+  IA+CYEEAGL  I+ FVLY D
Sbjct: 302 LASIEGTWSESLNHIAKCYEEAGLHHISNFVLYTD 330

[Close]

BLAST of Carg24262 vs. TAIR 10
Match: AT4G34090.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23370.1); Has 75 Blast hits to 73 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). )

HSP 1 Score: 455.3 bits (1170), Expect = 4.4e-128
Identity = 230/336 (68.45%), Postives = 279/336 (83.04%), Query Frame = 0


Query: 10  GSPRAAVLPSLLLGRRGVTIRCSSSSSTSDHVSFIKDVAATEPPQHLSNLLKMLKTRGES 69
           GS    + PS  L  R    R S  S  S HVSFIKDVAATEPP HL +LLK+L+TRGE+
Sbjct: 2   GSISMHITPSTALPIRHFRARVSCCS--SGHVSFIKDVAATEPPMHLHHLLKVLQTRGET 61

Query: 70  IISPGAKQGIIPLAIPLAKNSS-GTITALLRWPTAPAGMEMPVVDVNRNGVWLLAKNVDQ 129
           IISPGAKQG+IPLAIPL+KNSS G++TALLRWPTAP GM+MPVV+V R+GV L+A+NVD+
Sbjct: 62  IISPGAKQGLIPLAIPLSKNSSVGSVTALLRWPTAPPGMDMPVVEVWRSGVRLIARNVDE 121

Query: 130 FIHRLLVEEDAKGSGELNDELFLAAADAGQKLYERGDFAESQIKNIDGYLLKKVGIFPDI 189
           +IHR+LVEEDA+   EL  EL+ A+ +AG+KLYE+G FAES+I N+D Y+LKKVG+FPD+
Sbjct: 122 YIHRILVEEDAQ---ELT-ELYRASGEAGEKLYEKGAFAESEIDNLDVYVLKKVGLFPDL 181

Query: 190 IERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTEAKDAARGA 249
           +ERK+LRHF+EGD VSA+VTGEFYTKK+ FPGF RP+V+ A +L KVGR  EAKDAAR A
Sbjct: 182 LERKVLRHFDEGDHVSAMVTGEFYTKKDLFPGFGRPFVYYANILQKVGRNVEAKDAARVA 241

Query: 250 LKSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVALDQAAFLL 309
           L+SPWWTLGC YEEVA+IAQWEDEQIE+++EKV++EG+ EDL KGKAP QVALD AAFLL
Sbjct: 242 LRSPWWTLGCPYEEVASIAQWEDEQIEFIREKVSDEGRFEDLHKGKAPIQVALDVAAFLL 301

Query: 310 DLASVDGTWDISVERIAQCYEEAGLQEIARFVLYRD 345
           DLAS++GTW  S+  IA+CYEEAGL  I+ FVLY D
Sbjct: 302 DLASIEGTWSESLNHIAKCYEEAGLHHISNFVLYTD 331

[Close]

BLAST of Carg24262 vs. TAIR 10
Match: AT4G34090.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23370.1). )

HSP 1 Score: 449.1 bits (1154), Expect = 3.1e-126
Identity = 220/311 (70.74%), Postives = 268/311 (86.17%), Query Frame = 0


Query: 40  HVSFIKDVAATEPPQHLSNLLKMLKTRGESIISPGAKQGIIPLAIPLAKNSSGTITALLR 99
           HVSFIKDVAATEPP HL +LLK+L+TRGE+IISPGAKQG+IPLAIPL+KNSSG++TALLR
Sbjct: 84  HVSFIKDVAATEPPMHLHHLLKVLQTRGETIISPGAKQGLIPLAIPLSKNSSGSVTALLR 143

Query: 100 WPTAPAGMEMPVVDVNRNGVWLLAKNVDQFIHRLLVEEDAKGSGELNDELFLAAADAGQK 159
           WPTAP GM+MPVV+V R+GV L+A+NVD++IHR+LVEEDA+   EL  EL+ A+ +AG+K
Sbjct: 144 WPTAPPGMDMPVVEVWRSGVRLIARNVDEYIHRILVEEDAQ---ELT-ELYRASGEAGEK 203

Query: 160 LYERGDFAESQIKNIDGYLLKKVGIFPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFP 219
           LYE+G FAES+I N+D Y+LKKVG+FPD++ERK+LRHF+EGD VSA+VTGEFYTKK+ FP
Sbjct: 204 LYEKGAFAESEIDNLDVYVLKKVGLFPDLLERKVLRHFDEGDHVSAMVTGEFYTKKDLFP 263

Query: 220 GFARPYVFNAEVLLK------VGRKTEAKDAARGALKSPWWTLGCKYEEVANIAQWEDEQ 279
           GF RP+V+ A +L K      VGR  EAKDAAR AL+SPWWTLGC YEEVA+IAQWEDEQ
Sbjct: 264 GFGRPFVYYANILQKFILIRRVGRNVEAKDAARVALRSPWWTLGCPYEEVASIAQWEDEQ 323

Query: 280 IEYLKEKVTEEGKLEDLKKGKAPAQVALDQAAFLLDLASVDGTWDISVERIAQCYEEAGL 339
           IE+++EKV++EG+ EDL KGKAP QVALD AAFLLDLAS++GTW  S+  IA+CYEEAGL
Sbjct: 324 IEFIREKVSDEGRFEDLHKGKAPIQVALDVAAFLLDLASIEGTWSESLNHIAKCYEEAGL 383

Query: 340 QEIARFVLYRD 345
             I+ FVLY D
Sbjct: 384 HHISNFVLYTD 390

[Close]

BLAST of Carg24262 vs. TAIR 10
Match: AT2G23370.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34090.1); Has 73 Blast hits to 73 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). )

HSP 1 Score: 433.3 bits (1113), Expect = 1.8e-121
Identity = 210/340 (61.76%), Postives = 262/340 (77.06%), Query Frame = 0


Query: 5   GGVVCGSPRAAVLPSLLLGRRGVTIRCSSSSSTSDHVSFIKDVAATEPPQHLSNLLKMLK 64
           G  V G  R  +   LL G R       SSSS S+H  FIKD+A  +PP+HL  LL +  
Sbjct: 4   GAAVFGRKRRLI---LLHGSRNFARSFCSSSSLSEHECFIKDIAKAQPPKHLMQLLNIFT 63

Query: 65  TRGESIISPGAKQGIIPLAIPLAKNSSGTITALLRWPTAPAGMEMPVVDVNRNGVWLLAK 124
            RG+SI+SPGAKQG++PL IPL K S G+  ALLRWPTAP+ MEMPVV+V ++GVW LA 
Sbjct: 64  ARGKSIVSPGAKQGLLPLTIPLVKMSPGSSIALLRWPTAPSSMEMPVVEVQKHGVWFLAN 123

Query: 125 NVDQFIHRLLVEEDAKGSGELNDELFLAAADAGQKLYERGDFAESQIKNIDGYLLKKVGI 184
           NVDQFIHR+LVEED     E + E+F AA +AG+KLY +GDFA S++ ++D YLL+KVG+
Sbjct: 124 NVDQFIHRILVEEDVSKPEECSQEIFNAAGEAGKKLYSKGDFASSRLMDLDAYLLRKVGL 183

Query: 185 FPDIIERKILRHFEEGDLVSALVTGEFYTKKEHFPGFARPYVFNAEVLLKVGRKTEAKDA 244
           FPD +ERK++RH E GD VSALV  EFYTK+ +FPGFARP+ FNA+VLLK+GR  EAKDA
Sbjct: 184 FPDSLERKVIRHIENGDHVSALVATEFYTKRGNFPGFARPFAFNAKVLLKLGRNLEAKDA 243

Query: 245 ARGALKSPWWTLGCKYEEVANIAQWEDEQIEYLKEKVTEEGKLEDLKKGKAPAQVALDQA 304
           ARGALKS WWTLGC+YEE+A IA+W +EQI   KE+VT EGK  D+ +GK  AQ +LD+A
Sbjct: 244 ARGALKSSWWTLGCRYEEIAQIAEWGEEQIAQYKERVTGEGKQRDIDRGKPMAQASLDEA 303

Query: 305 AFLLDLASVDGTWDISVERIAQCYEEAGLQEIARFVLYRD 345
           AFLL+LAS++GTWD S+ER+AQCY+EAGL +IA+FVLYRD
Sbjct: 304 AFLLNLASLEGTWDESLERVAQCYKEAGLNDIAKFVLYRD 340

The following BLAST results are available for this feature:

BLAST of Carg24262 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015967.1	8.1e-193	100.00	hypothetical protein SDJN02_21071 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023533903.1	4.0e-192	99.71	uncharacterized protein LOC111795609 [Cucurbita pepo subsp. pepo]	[more]
XP_022946992.1	6.4e-190	98.26	uncharacterized protein LOC111451004 isoform X2 [Cucurbita moschata]	[more]
XP_023007379.1	7.1e-189	98.25	uncharacterized protein LOC111499892 [Cucurbita maxima] >XP_023007380.1 uncharac...	[more]
XP_022946988.1	2.1e-185	90.86	uncharacterized protein LOC111451004 isoform X1 [Cucurbita moschata] >XP_0229469...	[more]

BLAST of Carg24262 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JY0	2.5e-128	68.66	Protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic OS=Arabidopsis thaliana ...	[more]

BLAST of Carg24262 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G585	3.1e-190	98.26	uncharacterized protein LOC111451004 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1L0D2	3.4e-189	98.25	uncharacterized protein LOC111499892 OS=Cucurbita maxima OX=3661 GN=LOC111499892...	[more]
A0A6J1G5K1	1.0e-185	90.86	uncharacterized protein LOC111451004 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0LJE6	3.5e-181	93.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G279220 PE=4 SV=1	[more]
A0A5D3BJN5	1.3e-180	92.73	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Carg24262 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34090.1	1.8e-129	68.66	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G34090.2	4.4e-128	68.45	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G34090.3	3.1e-126	70.74	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G23370.1	1.8e-121	61.76	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35115	CYCLIN DELTA-3	coord: 8..344
None	No IPR available	PANTHER	PTHR35115:SF4	PROTEIN IN CHLOROPLAST ATPASE BIOGENESIS, CHLOROPLASTIC	coord: 8..344

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24262-RA	Carg24262-RA	mRNA