Carg24231 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24231
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Glutamyl-tRNA (Gln) amidotransferase subunit C
Location	Carg_Chr14: 4534288 .. 4535115 (-)
RNA-Seq Expression	Carg24231
Synteny	Carg24231

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCTTCTGCTATTTCATATATTATGCAGTATCAAGATCATATTCACGTGATGAGCGCAAACATTATGATCTTTTTGGAAAAGTCCGGCCTGGTGATAAGGAATTCAGGAAAGCCTGGGAAAAACAGATGAATGAAGAAGAATCTACTCTATGGACAGACAGCGACGATGAGAAAGACGATAAAGAAGCGAAAAAAAACCGCCTCGAAGATGAGATAAGAAAGGTAAGGCAGCAGGCAAAAGAACACTCAGACTTGATTGATGCCGATGATAGTGATGAATTATGGAGTGTTTGGTCAGGGAGCGACGAAGAGAAGACCTTGTGGACTGGTAGTGAAGACGACGACGACGACGATACTCCTACAGAGGCCTACCCGAATGAAAGTAGTGACAAATACATAGATAGACTATTTGAATTCGAGGAAACATCGAAATACCGAACGATTTCGGAGCTATTGAAATCTGAACAGAAACCAGAAGAGTTATCCCCTGGAAAACAAGCCAGGAAAGTAGCAGTGGAGAATGCATTGAAGAAGCTGAAGAAAGGACCGGATGGGCGATATACGAATGTGTGGGAGGTGATGAGTGATGTAGATATCTTAATAGGAGCATTCGAAAACATAGTGTCAGGGCCTGAATATGCAGAGCTGAGGCAGGGAGGGGAGAAGAAACTGAATATGCAATTTTTCAAGGACATACAAGCACGCATGAGAGATCCAAATTTCAAATTCTCACAAGAACTGAAGCTGAAACCAAAGAGCAAAATGGTTTCCCAGAAGAAGTGGCAGAAGGCTCAGTCTAGACGAAGGAAAGCACAGAAGCGATGA

mRNA sequence

ATGAGCTTCTGCTATTTCATATATTATGCAGTATCAAGATCATATTCACGTGATGAGCGCAAACATTATGATCTTTTTGGAAAAGTCCGGCCTGGTGATAAGGAATTCAGGAAAGCCTGGGAAAAACAGATGAATGAAGAAGAATCTACTCTATGGACAGACAGCGACGATGAGAAAGACGATAAAGAAGCGAAAAAAAACCGCCTCGAAGATGAGATAAGAAAGGTAAGGCAGCAGGCAAAAGAACACTCAGACTTGATTGATGCCGATGATAGTGATGAATTATGGAGTGTTTGGTCAGGGAGCGACGAAGAGAAGACCTTGTGGACTGGTAGTGAAGACGACGACGACGACGATACTCCTACAGAGGCCTACCCGAATGAAAGTAGTGACAAATACATAGATAGACTATTTGAATTCGAGGAAACATCGAAATACCGAACGATTTCGGAGCTATTGAAATCTGAACAGAAACCAGAAGAGTTATCCCCTGGAAAACAAGCCAGGAAAGTAGCAGTGGAGAATGCATTGAAGAAGCTGAAGAAAGGACCGGATGGGCGATATACGAATGTGTGGGAGGTGATGAGTGATGTAGATATCTTAATAGGAGCATTCGAAAACATAGTGTCAGGGCCTGAATATGCAGAGCTGAGGCAGGGAGGGGAGAAGAAACTGAATATGCAATTTTTCAAGGACATACAAGCACGCATGAGAGATCCAAATTTCAAATTCTCACAAGAACTGAAGCTGAAACCAAAGAGCAAAATGGTTTCCCAGAAGAAGTGGCAGAAGGCTCAGTCTAGACGAAGGAAAGCACAGAAGCGATGA

Coding sequence (CDS)

ATGAGCTTCTGCTATTTCATATATTATGCAGTATCAAGATCATATTCACGTGATGAGCGCAAACATTATGATCTTTTTGGAAAAGTCCGGCCTGGTGATAAGGAATTCAGGAAAGCCTGGGAAAAACAGATGAATGAAGAAGAATCTACTCTATGGACAGACAGCGACGATGAGAAAGACGATAAAGAAGCGAAAAAAAACCGCCTCGAAGATGAGATAAGAAAGGTAAGGCAGCAGGCAAAAGAACACTCAGACTTGATTGATGCCGATGATAGTGATGAATTATGGAGTGTTTGGTCAGGGAGCGACGAAGAGAAGACCTTGTGGACTGGTAGTGAAGACGACGACGACGACGATACTCCTACAGAGGCCTACCCGAATGAAAGTAGTGACAAATACATAGATAGACTATTTGAATTCGAGGAAACATCGAAATACCGAACGATTTCGGAGCTATTGAAATCTGAACAGAAACCAGAAGAGTTATCCCCTGGAAAACAAGCCAGGAAAGTAGCAGTGGAGAATGCATTGAAGAAGCTGAAGAAAGGACCGGATGGGCGATATACGAATGTGTGGGAGGTGATGAGTGATGTAGATATCTTAATAGGAGCATTCGAAAACATAGTGTCAGGGCCTGAATATGCAGAGCTGAGGCAGGGAGGGGAGAAGAAACTGAATATGCAATTTTTCAAGGACATACAAGCACGCATGAGAGATCCAAATTTCAAATTCTCACAAGAACTGAAGCTGAAACCAAAGAGCAAAATGGTTTCCCAGAAGAAGTGGCAGAAGGCTCAGTCTAGACGAAGGAAAGCACAGAAGCGATGA

Protein sequence

MSFCYFIYYAVSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSDDEKDDKEAKKNRLEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDTPTEAYPNESSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRYTNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQELKLKPKSKMVSQKKWQKAQSRRRKAQKR

Homology

[Close]

BLAST of Carg24231 vs. NCBI nr
Match: KAG7017954.1 (hypothetical protein SDJN02_19820, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 527.7 bits (1358), Expect = 6.0e-146
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MSFCYFIYYAVSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSDDEKD 60
           MSFCYFIYYAVSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSDDEKD
Sbjct: 1   MSFCYFIYYAVSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSDDEKD 60

Query: 61  DKEAKKNRLEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDT 120
           DKEAKKNRLEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDT
Sbjct: 61  DKEAKKNRLEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDT 120

Query: 121 PTEAYPNESSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKL 180
           PTEAYPNESSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKL
Sbjct: 121 PTEAYPNESSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKL 180

Query: 181 KKGPDGRYTNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDP 240
           KKGPDGRYTNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDP
Sbjct: 181 KKGPDGRYTNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDP 240

Query: 241 NFKFSQELKLKPKSKMVSQKKWQKAQSRRRKAQKR 276
           NFKFSQELKLKPKSKMVSQKKWQKAQSRRRKAQKR
Sbjct: 241 NFKFSQELKLKPKSKMVSQKKWQKAQSRRRKAQKR 275

[Close]

BLAST of Carg24231 vs. NCBI nr
Match: KAG6581221.1 (hypothetical protein SDJN03_21223, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 507.3 bits (1305), Expect = 8.3e-140
Identity = 265/267 (99.25%), Postives = 266/267 (99.63%), Query Frame = 0


Query: 9   YAVSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSDDEKDDKEAKKNR 68
           + VSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSDDEKDDKEAKKNR
Sbjct: 48  FQVSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSDDEKDDKEAKKNR 107

Query: 69  LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 128
           LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDTPTEAYPNE
Sbjct: 108 LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 167

Query: 129 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 188
           SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY
Sbjct: 168 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 227

Query: 189 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 248
           TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL
Sbjct: 228 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 287

Query: 249 KLKPKSKMVSQKKWQKAQSRRRKAQKR 276
           KLKPKSKMVSQKKWQKAQSRRRKAQKR
Sbjct: 288 KLKPKSKMVSQKKWQKAQSRRRKAQKR 314

[Close]

BLAST of Carg24231 vs. NCBI nr
Match: XP_022935143.1 (uncharacterized protein LOC111442102 [Cucurbita moschata])

HSP 1 Score: 504.2 bits (1297), Expect = 7.0e-139
Identity = 263/267 (98.50%), Postives = 266/267 (99.63%), Query Frame = 0


Query: 9   YAVSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSDDEKDDKEAKKNR 68
           + VSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSD+EKDDKEAKKNR
Sbjct: 48  FQVSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSDNEKDDKEAKKNR 107

Query: 69  LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 128
           LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSD+EKTLWTGSEDDDDDDTPTEAYPNE
Sbjct: 108 LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDQEKTLWTGSEDDDDDDTPTEAYPNE 167

Query: 129 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 188
           SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY
Sbjct: 168 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 227

Query: 189 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 248
           TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL
Sbjct: 228 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 287

Query: 249 KLKPKSKMVSQKKWQKAQSRRRKAQKR 276
           KLKPKSKMVSQKKWQKAQSRRRKAQKR
Sbjct: 288 KLKPKSKMVSQKKWQKAQSRRRKAQKR 314

[Close]

BLAST of Carg24231 vs. NCBI nr
Match: XP_022983260.1 (uncharacterized protein LOC111481894 [Cucurbita maxima])

HSP 1 Score: 501.9 bits (1291), Expect = 3.5e-138
Identity = 260/267 (97.38%), Postives = 266/267 (99.63%), Query Frame = 0


Query: 9   YAVSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSDDEKDDKEAKKNR 68
           + VSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMN+E+STLWTDSDDEKDDKEAKKNR
Sbjct: 48  FQVSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNKEQSTLWTDSDDEKDDKEAKKNR 107

Query: 69  LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 128
           LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDTPTEAYPNE
Sbjct: 108 LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 167

Query: 129 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 188
           SSDKYIDR+FEFEETSKYRTISELLKSEQ+PEELSPGKQARKVAVENALKKLKKGPDGRY
Sbjct: 168 SSDKYIDRIFEFEETSKYRTISELLKSEQEPEELSPGKQARKVAVENALKKLKKGPDGRY 227

Query: 189 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 248
           TNVWEVMSD+DILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL
Sbjct: 228 TNVWEVMSDIDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 287

Query: 249 KLKPKSKMVSQKKWQKAQSRRRKAQKR 276
           KLKPKSKMVSQKKWQKAQSRRRKAQKR
Sbjct: 288 KLKPKSKMVSQKKWQKAQSRRRKAQKR 314

[Close]

BLAST of Carg24231 vs. NCBI nr
Match: XP_023528329.1 (uncharacterized protein LOC111791283 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 498.4 bits (1282), Expect = 3.9e-137
Identity = 262/267 (98.13%), Postives = 263/267 (98.50%), Query Frame = 0


Query: 9   YAVSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSDDEKDDKEAKKNR 68
           +  SRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQM EEESTLWTDSDDEKDDKEAKKNR
Sbjct: 48  FQASRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMKEEESTLWTDSDDEKDDKEAKKNR 107

Query: 69  LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 128
           LEDEIRKVRQQAKEHSDLIDADDSDELWSV SGSDEEKTLWTGSEDDDDDDTPTEAYPNE
Sbjct: 108 LEDEIRKVRQQAKEHSDLIDADDSDELWSVLSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 167

Query: 129 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 188
           SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY
Sbjct: 168 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 227

Query: 189 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 248
           TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL
Sbjct: 228 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 287

Query: 249 KLKPKSKMVSQKKWQKAQSRRRKAQKR 276
           KLKPKSKMVSQKKWQKAQSRRRKAQKR
Sbjct: 288 KLKPKSKMVSQKKWQKAQSRRRKAQKR 314

[Close]

BLAST of Carg24231 vs. ExPASy TrEMBL
Match: A0A6J1F9Q4 (uncharacterized protein LOC111442102 OS=Cucurbita moschata OX=3662 GN=LOC111442102 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 3.4e-139
Identity = 263/267 (98.50%), Postives = 266/267 (99.63%), Query Frame = 0


Query: 9   YAVSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSDDEKDDKEAKKNR 68
           + VSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSD+EKDDKEAKKNR
Sbjct: 48  FQVSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSDNEKDDKEAKKNR 107

Query: 69  LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 128
           LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSD+EKTLWTGSEDDDDDDTPTEAYPNE
Sbjct: 108 LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDQEKTLWTGSEDDDDDDTPTEAYPNE 167

Query: 129 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 188
           SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY
Sbjct: 168 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 227

Query: 189 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 248
           TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL
Sbjct: 228 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 287

Query: 249 KLKPKSKMVSQKKWQKAQSRRRKAQKR 276
           KLKPKSKMVSQKKWQKAQSRRRKAQKR
Sbjct: 288 KLKPKSKMVSQKKWQKAQSRRRKAQKR 314

[Close]

BLAST of Carg24231 vs. ExPASy TrEMBL
Match: A0A6J1J5D0 (uncharacterized protein LOC111481894 OS=Cucurbita maxima OX=3661 GN=LOC111481894 PE=4 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 1.7e-138
Identity = 260/267 (97.38%), Postives = 266/267 (99.63%), Query Frame = 0


Query: 9   YAVSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSDDEKDDKEAKKNR 68
           + VSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMN+E+STLWTDSDDEKDDKEAKKNR
Sbjct: 48  FQVSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNKEQSTLWTDSDDEKDDKEAKKNR 107

Query: 69  LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 128
           LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDTPTEAYPNE
Sbjct: 108 LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 167

Query: 129 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 188
           SSDKYIDR+FEFEETSKYRTISELLKSEQ+PEELSPGKQARKVAVENALKKLKKGPDGRY
Sbjct: 168 SSDKYIDRIFEFEETSKYRTISELLKSEQEPEELSPGKQARKVAVENALKKLKKGPDGRY 227

Query: 189 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 248
           TNVWEVMSD+DILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL
Sbjct: 228 TNVWEVMSDIDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 287

Query: 249 KLKPKSKMVSQKKWQKAQSRRRKAQKR 276
           KLKPKSKMVSQKKWQKAQSRRRKAQKR
Sbjct: 288 KLKPKSKMVSQKKWQKAQSRRRKAQKR 314

[Close]

BLAST of Carg24231 vs. ExPASy TrEMBL
Match: A0A1S3C5E2 (uncharacterized protein LOC103496851 OS=Cucumis melo OX=3656 GN=LOC103496851 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 2.2e-130
Identity = 245/267 (91.76%), Postives = 256/267 (95.88%), Query Frame = 0


Query: 9   YAVSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSDDEKDDKEAKKNR 68
           +  SRSYSR ERKHYDLFG VRPGDKEFRKAWEKQMNEEESTLWT+SDDE DD+E KKN 
Sbjct: 48  FQASRSYSRGERKHYDLFGNVRPGDKEFRKAWEKQMNEEESTLWTESDDEADDEERKKNH 107

Query: 69  LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 128
           LEDEIRK RQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSE DDDDD+PTEAYPNE
Sbjct: 108 LEDEIRKTRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEGDDDDDSPTEAYPNE 167

Query: 129 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 188
            SDKYIDRLFEFEETSKYRTISELLKSEQ+PEELSPGKQARK+AVENALKKLKKGPDGRY
Sbjct: 168 RSDKYIDRLFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKKGPDGRY 227

Query: 189 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 248
           TNVWEVMSDVDILIGAFEN+VSGPEYAELRQGG+KKLNMQFFKDIQARMRDPNFKFS EL
Sbjct: 228 TNVWEVMSDVDILIGAFENVVSGPEYAELRQGGQKKLNMQFFKDIQARMRDPNFKFSPEL 287

Query: 249 KLKPKSKMVSQKKWQKAQSRRRKAQKR 276
           KLKPKSK++SQK+WQKAQSRRRKAQKR
Sbjct: 288 KLKPKSKLISQKRWQKAQSRRRKAQKR 314

[Close]

BLAST of Carg24231 vs. ExPASy TrEMBL
Match: A0A6J1CQC9 (uncharacterized protein LOC111013198 OS=Momordica charantia OX=3673 GN=LOC111013198 PE=4 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 5.5e-129
Identity = 244/267 (91.39%), Postives = 258/267 (96.63%), Query Frame = 0


Query: 9   YAVSRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSDDEKDDKEAKKNR 68
           + VSRSYSR ERK YDLFGKV+PGDKEFRKAWEKQMNEEESTLWTDS+DE D+KE KK+R
Sbjct: 47  FRVSRSYSRGERKPYDLFGKVKPGDKEFRKAWEKQMNEEESTLWTDSEDEADNKEGKKSR 106

Query: 69  LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 128
           LE EI+KVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSE DDDDD PTEAYPNE
Sbjct: 107 LEHEIKKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEGDDDDDIPTEAYPNE 166

Query: 129 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 188
           SSDKYID+LFEFEETSKYRTISELLK+EQ+PEELSPGKQARK+AVENALKKLKKGPDGRY
Sbjct: 167 SSDKYIDKLFEFEETSKYRTISELLKAEQEPEELSPGKQARKLAVENALKKLKKGPDGRY 226

Query: 189 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 248
           TNVWEVMSD+DILIGAFENIVSGPEYAELRQGG+KKLNMQFFKDIQARMRDPNFKFS EL
Sbjct: 227 TNVWEVMSDIDILIGAFENIVSGPEYAELRQGGQKKLNMQFFKDIQARMRDPNFKFSPEL 286

Query: 249 KLKPKSKMVSQKKWQKAQSRRRKAQKR 276
           KLKPKSK+V+QKKWQKAQSRRRKAQKR
Sbjct: 287 KLKPKSKLVAQKKWQKAQSRRRKAQKR 313

[Close]

BLAST of Carg24231 vs. ExPASy TrEMBL
Match: A0A0A0L8W2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G185140 PE=4 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 6.0e-128
Identity = 243/264 (92.05%), Postives = 252/264 (95.45%), Query Frame = 0


Query: 12  SRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSDDEKDDKEAKKNRLED 71
           SRSYSR E KHYDLFG VRPGDKEFRKAWEKQMNEEESTLWT+SDDE DDKE KKNRLED
Sbjct: 43  SRSYSRGECKHYDLFGTVRPGDKEFRKAWEKQMNEEESTLWTESDDEADDKEQKKNRLED 102

Query: 72  EIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDTPTEAYPNESSD 131
           EIRK RQQAKEHSDLIDADDSDELWSVWS SDE+KTLWTGSE DDDDD PTEAYPNE SD
Sbjct: 103 EIRKTRQQAKEHSDLIDADDSDELWSVWSESDEDKTLWTGSEGDDDDDIPTEAYPNERSD 162

Query: 132 KYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRYTNV 191
           KYID+LFEFEETSKYRTISELLKSEQ+PEELSPGKQARK+AVENALKKLKKGPDGRYTNV
Sbjct: 163 KYIDKLFEFEETSKYRTISELLKSEQEPEELSPGKQARKLAVENALKKLKKGPDGRYTNV 222

Query: 192 WEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQELKLK 251
           WEVMSDVDILIGAFEN+VSGPEYAELRQGG+KKLNMQFFKDIQARMRDPNFKFS ELKLK
Sbjct: 223 WEVMSDVDILIGAFENVVSGPEYAELRQGGQKKLNMQFFKDIQARMRDPNFKFSPELKLK 282

Query: 252 PKSKMVSQKKWQKAQSRRRKAQKR 276
           PKSK+V QK+WQKAQSRRRKAQKR
Sbjct: 283 PKSKLVPQKRWQKAQSRRRKAQKR 306

[Close]

BLAST of Carg24231 vs. TAIR 10
Match: AT5G17460.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 377.5 bits (968), Expect = 9.3e-105
Identity = 199/267 (74.53%), Postives = 230/267 (86.14%), Query Frame = 0


Query: 12  SRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSDDEKDDK---EAKKNR 71
           +R Y+    K Y+LFG V+PGD +FRK WEK+M E++ TLW+ S+DE +DK   E+ +NR
Sbjct: 44  TRFYASGRGKDYNLFGNVKPGDDDFRKTWEKEM-EDDDTLWSGSEDESNDKTKQESGRNR 103

Query: 72  LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 131
           LE EI+K RQQAK+ +D ID DDSDEL+SVWSGSDEEKTLWTG E DDDDD PTE  PNE
Sbjct: 104 LEKEIKKARQQAKDSTDQIDGDDSDELYSVWSGSDEEKTLWTGDEGDDDDDIPTEPRPNE 163

Query: 132 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 191
           +SDKY+D+LFEFEE  KYRTISELLKSE +PEELSPGK+ARK+AVENALKKL KGPDGRY
Sbjct: 164 ASDKYLDKLFEFEEKPKYRTISELLKSENEPEELSPGKKARKLAVENALKKLNKGPDGRY 223

Query: 192 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 251
           TNVWEVMSDVDILIGAFENI+SGPEY ELR+GG K+LNMQFFKDIQ RMRDPNFKF+ E+
Sbjct: 224 TNVWEVMSDVDILIGAFENIISGPEYEELRKGGPKRLNMQFFKDIQTRMRDPNFKFTPEI 283

Query: 252 KLKPKSKMVSQKKWQKAQSRRRKAQKR 276
           KLKPKSK+V +KKWQKAQSR RKA+KR
Sbjct: 284 KLKPKSKLVPRKKWQKAQSRIRKAKKR 309

[Close]

BLAST of Carg24231 vs. TAIR 10
Match: AT5G17460.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress. )

HSP 1 Score: 377.5 bits (968), Expect = 9.3e-105
Identity = 199/267 (74.53%), Postives = 230/267 (86.14%), Query Frame = 0


Query: 12  SRSYSRDERKHYDLFGKVRPGDKEFRKAWEKQMNEEESTLWTDSDDEKDDK---EAKKNR 71
           +R Y+    K Y+LFG V+PGD +FRK WEK+M E++ TLW+ S+DE +DK   E+ +NR
Sbjct: 64  TRFYASGRGKDYNLFGNVKPGDDDFRKTWEKEM-EDDDTLWSGSEDESNDKTKQESGRNR 123

Query: 72  LEDEIRKVRQQAKEHSDLIDADDSDELWSVWSGSDEEKTLWTGSEDDDDDDTPTEAYPNE 131
           LE EI+K RQQAK+ +D ID DDSDEL+SVWSGSDEEKTLWTG E DDDDD PTE  PNE
Sbjct: 124 LEKEIKKARQQAKDSTDQIDGDDSDELYSVWSGSDEEKTLWTGDEGDDDDDIPTEPRPNE 183

Query: 132 SSDKYIDRLFEFEETSKYRTISELLKSEQKPEELSPGKQARKVAVENALKKLKKGPDGRY 191
           +SDKY+D+LFEFEE  KYRTISELLKSE +PEELSPGK+ARK+AVENALKKL KGPDGRY
Sbjct: 184 ASDKYLDKLFEFEEKPKYRTISELLKSENEPEELSPGKKARKLAVENALKKLNKGPDGRY 243

Query: 192 TNVWEVMSDVDILIGAFENIVSGPEYAELRQGGEKKLNMQFFKDIQARMRDPNFKFSQEL 251
           TNVWEVMSDVDILIGAFENI+SGPEY ELR+GG K+LNMQFFKDIQ RMRDPNFKF+ E+
Sbjct: 244 TNVWEVMSDVDILIGAFENIISGPEYEELRKGGPKRLNMQFFKDIQTRMRDPNFKFTPEI 303

Query: 252 KLKPKSKMVSQKKWQKAQSRRRKAQKR 276
           KLKPKSK+V +KKWQKAQSR RKA+KR
Sbjct: 304 KLKPKSKLVPRKKWQKAQSRIRKAKKR 329

The following BLAST results are available for this feature:

BLAST of Carg24231 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7017954.1	6.0e-146	100.00	hypothetical protein SDJN02_19820, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6581221.1	8.3e-140	99.25	hypothetical protein SDJN03_21223, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022935143.1	7.0e-139	98.50	uncharacterized protein LOC111442102 [Cucurbita moschata]	[more]
XP_022983260.1	3.5e-138	97.38	uncharacterized protein LOC111481894 [Cucurbita maxima]	[more]
XP_023528329.1	3.9e-137	98.13	uncharacterized protein LOC111791283 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg24231 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg24231 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F9Q4	3.4e-139	98.50	uncharacterized protein LOC111442102 OS=Cucurbita moschata OX=3662 GN=LOC1114421...	[more]
A0A6J1J5D0	1.7e-138	97.38	uncharacterized protein LOC111481894 OS=Cucurbita maxima OX=3661 GN=LOC111481894...	[more]
A0A1S3C5E2	2.2e-130	91.76	uncharacterized protein LOC103496851 OS=Cucumis melo OX=3656 GN=LOC103496851 PE=...	[more]
A0A6J1CQC9	5.5e-129	91.39	uncharacterized protein LOC111013198 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A0A0L8W2	6.0e-128	92.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G185140 PE=4 SV=1	[more]

BLAST of Carg24231 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17460.1	9.3e-105	74.53	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT5G17460.2	9.3e-105	74.53	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 59..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..275
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..275
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..89
None	No IPR available	PANTHER	PTHR38393	GLUTAMYL-TRNA (GLN) AMIDOTRANSFERASE SUBUNIT C	coord: 9..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24231-RA	Carg24231-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000214	regulation of proline metabolic process
biological_process	GO:0006413	translational initiation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003743	translation initiation factor activity