Carg24177 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24177
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	expansin-B18-like
Location	Carg_Chr06: 6226708 .. 6228441 (-)
RNA-Seq Expression	Carg24177
Synteny	Carg24177

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAATTTGAAGCATTCCCTTTTCTTTGCTACCCTTCTTTCTCTTTCACTTACTCCTTGTTTTTGCTTCAATCCCAAATCCCTTAATCTCTCCAACTATGACTCCTACGATTCTAATTCCGGCTGGTCCCCGGCCGTCGCCACCTGGTACGGCAGCCCTGTCGGCGCCGGGAGCGACGGTACTTCTCCACCCTCCACTCCAATTCCATTGAATATTGTTTTTACATTTATTTATAATATGACTGTTTTTTAGGAGGTGCGTGTGGGTATGGAAGCGCGGTGGGGAAACCACCATTCTCGTCGTTGATTGCGGCGGGAGGCCCTTCCTTGTTCAAATCCGGCAAGGGCTGTGGTGCTTGTTATCAAGTGAAGTGCTCGGTAAAGGGCGCGTGCTCCCGGAATCCGGTGACGGTGGTTATAACTGACAGTTGTCCTGGCGGTTCCTGTGCTTCCGACGCTGTCCATTTCGATCTCAGCGGCACTGCTTTTGGTGCTATGGCTGCTTCTCGTCGTGCCGATGAGCTCCGCAATCTTGGCGTACTGCAGATTCAATATAAAAGGTATGCATTGACTCTAGTTAATCATGATTTAACTCGAGTTAACCACCGGTTTAATTTAAAAATAATAATAATAAAGAAATATAAATAGCATATACATTCAAATCCGATTAGAAATCAGGACTCTCCACAATTATATGATATTGTTCACTTTGAGCATAAGTCATCATGGCTTGACTGTGTGTTTCCCAGAAGGCTTCATATGAATGGAGATATATTCCTTACTTCTAAATTGTTCTTGTTAAACACAACTCTCGGTGGGAAATACTCATATTTGAGTATAAGCTATCATGGCTTGGCTGTGGGCTTCCCTCGGAGGCCTCGCAACAATGGAGATATATTCCTTACTTGTAAATTATTCCTGGGATGGTTGAACACAACTCTCTGTAGGAAACACGAATTTATGATTTATTAAAACACGGCCAATAATTTGTTGGGATTTTGAAACAAATCGCGTTAGAAATCACGACTCTCTACAATAATATGATATTGTCCACTTTCAGCATAAGCTATCATGACTTAGCTCTGGACTTTCCCAAAAGGCCTCACAACAATGGAGATATATATCTTACTCGTAAATTATTTCATGGGATGGTTGAACACAACTTTGTGTGAGAAACACTCATATTTGAGCATAAGTTATCATGGCTTGGCTGTGGGCTTTCCCAGACGGTCTCGTAACAATTGAGATATATTCCTTTGGTAAATTATTCTTTGGGATGGTTGAACACAACTATTCTGTGGGAAACACTCACATTTTTTTATTTAAACGAATCGAGAAAAAATTACAAGACACTGTGAATACGTTTTAGACAAGTAAAACTGTGACATTGACATGCAGGGTGGAATGCAAATATGGTGGAAGTTCGATCCAGTTCGTGGTGGATGCAGGGTCGAACCCAAACTATTTTGCAACTTTGATCGAATACGAAAATGGAGATGGAGTTCTTGGTTCAGTGGAGTTGAAACAAGCGCAGGGCTCGGGTCCATGGATTCCCATGAAGCAGTCATGGGGTGCAGTTTGGAAGCTGGACTATGGCTCCGCCCTCAAGGCTCCCTTCTCTTTCAGGCTCACTGCCCTGGAATCCAGGAAAGCCGTGGTGGCTAACAACGTGATTCCGGCAGGGTGGCAGCCGGGGAAGACTTATAGATCAGTGGTCAACTTCAAGGCTTAG

mRNA sequence

ATGATGAATTTGAAGCATTCCCTTTTCTTTGCTACCCTTCTTTCTCTTTCACTTACTCCTTGTTTTTGCTTCAATCCCAAATCCCTTAATCTCTCCAACTATGACTCCTACGATTCTAATTCCGGCTGGTCCCCGGCCGTCGCCACCTGGTACGGCAGCCCTGTCGGCGCCGGGAGCGACGGAGGTGCGTGTGGGTATGGAAGCGCGGTGGGGAAACCACCATTCTCGTCGTTGATTGCGGCGGGAGGCCCTTCCTTGTTCAAATCCGGCAAGGGCTGTGGTGCTTGTTATCAAGTGAAGTGCTCGGTAAAGGGCGCGTGCTCCCGGAATCCGGTGACGGTGGTTATAACTGACAGTTGTCCTGGCGGTTCCTGTGCTTCCGACGCTGTCCATTTCGATCTCAGCGGCACTGCTTTTGGTGCTATGGCTGCTTCTCGTCGTGCCGATGAGCTCCGCAATCTTGGCGTACTGCAGATTCAATATAAAAGGGTGGAATGCAAATATGGTGGAAGTTCGATCCAGTTCGTGGTGGATGCAGGGTCGAACCCAAACTATTTTGCAACTTTGATCGAATACGAAAATGGAGATGGAGTTCTTGGTTCAGTGGAGTTGAAACAAGCGCAGGGCTCGGGTCCATGGATTCCCATGAAGCAGTCATGGGGTGCAGTTTGGAAGCTGGACTATGGCTCCGCCCTCAAGGCTCCCTTCTCTTTCAGGCTCACTGCCCTGGAATCCAGGAAAGCCGTGGTGGCTAACAACGTGATTCCGGCAGGGTGGCAGCCGGGGAAGACTTATAGATCAGTGGTCAACTTCAAGGCTTAG

Coding sequence (CDS)

ATGATGAATTTGAAGCATTCCCTTTTCTTTGCTACCCTTCTTTCTCTTTCACTTACTCCTTGTTTTTGCTTCAATCCCAAATCCCTTAATCTCTCCAACTATGACTCCTACGATTCTAATTCCGGCTGGTCCCCGGCCGTCGCCACCTGGTACGGCAGCCCTGTCGGCGCCGGGAGCGACGGAGGTGCGTGTGGGTATGGAAGCGCGGTGGGGAAACCACCATTCTCGTCGTTGATTGCGGCGGGAGGCCCTTCCTTGTTCAAATCCGGCAAGGGCTGTGGTGCTTGTTATCAAGTGAAGTGCTCGGTAAAGGGCGCGTGCTCCCGGAATCCGGTGACGGTGGTTATAACTGACAGTTGTCCTGGCGGTTCCTGTGCTTCCGACGCTGTCCATTTCGATCTCAGCGGCACTGCTTTTGGTGCTATGGCTGCTTCTCGTCGTGCCGATGAGCTCCGCAATCTTGGCGTACTGCAGATTCAATATAAAAGGGTGGAATGCAAATATGGTGGAAGTTCGATCCAGTTCGTGGTGGATGCAGGGTCGAACCCAAACTATTTTGCAACTTTGATCGAATACGAAAATGGAGATGGAGTTCTTGGTTCAGTGGAGTTGAAACAAGCGCAGGGCTCGGGTCCATGGATTCCCATGAAGCAGTCATGGGGTGCAGTTTGGAAGCTGGACTATGGCTCCGCCCTCAAGGCTCCCTTCTCTTTCAGGCTCACTGCCCTGGAATCCAGGAAAGCCGTGGTGGCTAACAACGTGATTCCGGCAGGGTGGCAGCCGGGGAAGACTTATAGATCAGTGGTCAACTTCAAGGCTTAG

Protein sequence

MMNLKHSLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSDGGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSCPGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAGSNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRLTALESRKAVVANNVIPAGWQPGKTYRSVVNFKA

Homology

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BLAST of Carg24177 vs. NCBI nr
Match: KAG6597020.1 (putative expansin-B2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028498.1 putative expansin-B2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 555.8 bits (1431), Expect = 2.0e-154
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 1   MMNLKHSLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSD 60
           MMNLKHSLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSD
Sbjct: 1   MMNLKHSLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSD 60

Query: 61  GGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC 120
           GGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC
Sbjct: 61  GGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC 120

Query: 121 PGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAG 180
           PGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAG
Sbjct: 121 PGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAG 180

Query: 181 SNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRL 240
           SNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRL
Sbjct: 181 SNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRL 240

Query: 241 TALESRKAVVANNVIPAGWQPGKTYRSVVNFKA 274
           TALESRKAVVANNVIPAGWQPGKTYRSVVNFKA
Sbjct: 241 TALESRKAVVANNVIPAGWQPGKTYRSVVNFKA 273

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BLAST of Carg24177 vs. NCBI nr
Match: XP_022945938.1 (putative expansin-B2 [Cucurbita moschata])

HSP 1 Score: 550.1 bits (1416), Expect = 1.1e-152
Identity = 269/273 (98.53%), Postives = 271/273 (99.27%), Query Frame = 0


Query: 1   MMNLKHSLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSD 60
           MMN KHSLFFATLLSLSLTPCFCFNPKSLNLSNY+SYDSNSGWSPAVATWYGSPVGAGSD
Sbjct: 1   MMNFKHSLFFATLLSLSLTPCFCFNPKSLNLSNYESYDSNSGWSPAVATWYGSPVGAGSD 60

Query: 61  GGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC 120
           GGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC
Sbjct: 61  GGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC 120

Query: 121 PGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAG 180
           PGGSCASDAVHFDLSGTAFGAMA SRRADELRNLGVLQIQYKRVECKYGG+SIQFVVDAG
Sbjct: 121 PGGSCASDAVHFDLSGTAFGAMAVSRRADELRNLGVLQIQYKRVECKYGGTSIQFVVDAG 180

Query: 181 SNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRL 240
           SNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRL
Sbjct: 181 SNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRL 240

Query: 241 TALESRKAVVANNVIPAGWQPGKTYRSVVNFKA 274
           TALESRKAVVANNVIPAGWQPGKTYRSVVNFKA
Sbjct: 241 TALESRKAVVANNVIPAGWQPGKTYRSVVNFKA 273

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BLAST of Carg24177 vs. NCBI nr
Match: XP_023539434.1 (putative expansin-B2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 538.1 bits (1385), Expect = 4.4e-149
Identity = 264/273 (96.70%), Postives = 267/273 (97.80%), Query Frame = 0


Query: 1   MMNLKHSLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSD 60
           MMN KHSLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSD
Sbjct: 181 MMNFKHSLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSD 240

Query: 61  GGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC 120
           GGACGYGSAVG+PPFSSLIAAGGPSLFKSGKGCGACYQVKC  KGACSRNPVTVVITDSC
Sbjct: 241 GGACGYGSAVGEPPFSSLIAAGGPSLFKSGKGCGACYQVKCLGKGACSRNPVTVVITDSC 300

Query: 121 PGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAG 180
           PGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGG+SIQFVVDAG
Sbjct: 301 PGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGTSIQFVVDAG 360

Query: 181 SNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRL 240
           SNPNYFA LIEYENGDGVLGSVELKQAQGSG WIPMKQSWGAVWKLDYGSALKAPFSFRL
Sbjct: 361 SNPNYFAALIEYENGDGVLGSVELKQAQGSGSWIPMKQSWGAVWKLDYGSALKAPFSFRL 420

Query: 241 TALESRKAVVANNVIPAGWQPGKTYRSVVNFKA 274
           TA ESRKAVVANNVIPAGW+PGKTYRSVVNFKA
Sbjct: 421 TAQESRKAVVANNVIPAGWEPGKTYRSVVNFKA 453

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BLAST of Carg24177 vs. NCBI nr
Match: XP_022974239.1 (putative expansin-B2 isoform X1 [Cucurbita maxima] >XP_022974242.1 putative expansin-B2 isoform X2 [Cucurbita maxima])

HSP 1 Score: 537.3 bits (1383), Expect = 7.5e-149
Identity = 261/272 (95.96%), Postives = 266/272 (97.79%), Query Frame = 0


Query: 1   MMNLKHSLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSD 60
           MMN KHSLFFA LLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSP VATWYGSPVGAGSD
Sbjct: 1   MMNFKHSLFFAALLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPGVATWYGSPVGAGSD 60

Query: 61  GGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC 120
           GGACGYG+AVG+PPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC
Sbjct: 61  GGACGYGNAVGEPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC 120

Query: 121 PGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAG 180
           PGGSCASDAVHFDLSGTAFGAMAASRR DELRNLGVLQ+QYKRVECKYGG+SIQFVVDAG
Sbjct: 121 PGGSCASDAVHFDLSGTAFGAMAASRRGDELRNLGVLQVQYKRVECKYGGTSIQFVVDAG 180

Query: 181 SNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRL 240
           SNPNYFA LIEY+NGDGVLGSVELKQAQGSG WIPMKQSWGAVWKLDYGSALKAPFSFRL
Sbjct: 181 SNPNYFAALIEYQNGDGVLGSVELKQAQGSGSWIPMKQSWGAVWKLDYGSALKAPFSFRL 240

Query: 241 TALESRKAVVANNVIPAGWQPGKTYRSVVNFK 273
           TALESRKAVVANNVIPAGWQPGKTYRSVVNFK
Sbjct: 241 TALESRKAVVANNVIPAGWQPGKTYRSVVNFK 272

[Close]

BLAST of Carg24177 vs. NCBI nr
Match: XP_023521638.1 (putative expansin-B2, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 498.4 bits (1282), Expect = 3.8e-137
Identity = 243/252 (96.43%), Postives = 246/252 (97.62%), Query Frame = 0


Query: 22  FCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSDGGACGYGSAVGKPPFSSLIAA 81
           FCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSDGGACGYGSAVG+PPFSSLIAA
Sbjct: 1   FCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSDGGACGYGSAVGEPPFSSLIAA 60

Query: 82  GGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSCPGGSCASDAVHFDLSGTAFGA 141
           GGPSLFKSGKGCGACYQVKC  KGACSRNPVTVVITDSCPGGSCASDAVHFDLSGTAFGA
Sbjct: 61  GGPSLFKSGKGCGACYQVKCLGKGACSRNPVTVVITDSCPGGSCASDAVHFDLSGTAFGA 120

Query: 142 MAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAGSNPNYFATLIEYENGDGVLGS 201
           MAASRRADELRNLGVLQIQYKR ECKYGG+SIQFVVDAGSNPNYFA LIEYENGDGVLGS
Sbjct: 121 MAASRRADELRNLGVLQIQYKRXECKYGGTSIQFVVDAGSNPNYFAALIEYENGDGVLGS 180

Query: 202 VELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRLTALESRKAVVANNVIPAGWQP 261
           VELKQAQGSG WIPMKQSWGAVWKLDYGSALKAPFSFRLTA ESRKAVVANNVIPAGW+P
Sbjct: 181 VELKQAQGSGSWIPMKQSWGAVWKLDYGSALKAPFSFRLTAQESRKAVVANNVIPAGWEP 240

Query: 262 GKTYRSVVNFKA 274
           GKTYRSVVNFKA
Sbjct: 241 GKTYRSVVNFKA 252

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BLAST of Carg24177 vs. ExPASy Swiss-Prot
Match: Q9SHY6 (Putative expansin-B2 OS=Arabidopsis thaliana OX=3702 GN=EXPB2 PE=3 SV=2)

HSP 1 Score: 336.7 bits (862), Expect = 2.5e-91
Identity = 172/271 (63.47%), Postives = 204/271 (75.28%), Query Frame = 0


Query: 1   MMNLKHSLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSD 60
           +MNL   LF  T L L+LT   CF+PK  N+S   + DS+  WS A +TWYG+P G GSD
Sbjct: 12  LMNL---LFALTCLLLNLT--HCFSPKKFNISAATTSDSD--WSIAGSTWYGNPTGYGSD 71

Query: 61  GGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC 120
           GGACGYG+AV +PPFS +++AGGPSLFKSGKGCGACYQVKC+ K ACS+NPVTVVITD C
Sbjct: 72  GGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSACSKNPVTVVITDEC 131

Query: 121 PGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAG 180
           PG  C  ++VHFDLSGTAFGAMA S +  +LRN+G LQI YK+VEC Y G ++ F VD G
Sbjct: 132 PG--CVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQVDKG 191

Query: 181 SNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRL 240
           SN N FA L+ Y NGDG +G +ELKQA  S  W+ M QSWGAVWKLD  S L+AP S R+
Sbjct: 192 SNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQSWGAVWKLDVSSPLRAPLSLRV 251

Query: 241 TALESRKAVVANNVIPAGWQPGKTYRSVVNF 272
           T+LES K VVA+NVIPA WQPG  Y+S VNF
Sbjct: 252 TSLESGKTVVASNVIPANWQPGAIYKSNVNF 273

[Close]

BLAST of Carg24177 vs. ExPASy Swiss-Prot
Match: Q7XT40 (Expansin-B15 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB15 PE=3 SV=2)

HSP 1 Score: 312.8 bits (800), Expect = 3.9e-84
Identity = 153/231 (66.23%), Postives = 177/231 (76.62%), Query Frame = 0


Query: 41  SGWSPAVATWYGSPVGAGSDGGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVK 100
           S WS   ATWYG+  GAGSDGGACGY  AV + PFSS+IAAG PS++KSG GCG+CYQVK
Sbjct: 35  SSWSNGGATWYGAANGAGSDGGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVK 94

Query: 101 CSVKGACSRNPVTVVITDSCPGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQ 160
           C+   ACS NPVTVV+TD CPGG C S+ VHFDLSGTAFGAMA   +AD+LR  GVLQIQ
Sbjct: 95  CTGNSACSGNPVTVVLTDECPGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQ 154

Query: 161 YKRVECKYGGSSIQFVVDAGSNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSW 220
           Y RV C +GG  + FVVD GSNPNYFA L++YENGDG L  VEL Q      W  M+QSW
Sbjct: 155 YNRVPCNWGGVKLTFVVDVGSNPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSW 214

Query: 221 GAVWKLDYGSALKAPFSFRLTALESRKAVVANNVIPAGWQPGKTYRSVVNF 272
           GAVWKL+ GSAL+APFS RLT+  S K +VA+NVIP+GW+PG +Y S VNF
Sbjct: 215 GAVWKLNAGSALQAPFSIRLTS-SSGKTLVASNVIPSGWKPGMSYISTVNF 264

[Close]

BLAST of Carg24177 vs. ExPASy Swiss-Prot
Match: Q5W6Z9 (Expansin-B18 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB18 PE=2 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 7.4e-83
Identity = 156/270 (57.78%), Postives = 193/270 (71.48%), Query Frame = 0


Query: 2   MNLKHSLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSDG 61
           MN K  L  +T + ++    F   P+    ++ + +   S WS   ATWYG+  GAGSDG
Sbjct: 1   MNSKFQLILSTFVVIA---AFTLLPRP--CASIEFHRKLSSWSNGGATWYGAANGAGSDG 60

Query: 62  GACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSCP 121
           GACGY +AV + PFSS+IAAG PS++KSG GCG+CYQVKCS   ACS NPVTVV+TD CP
Sbjct: 61  GACGYQAAVDQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCSGNSACSGNPVTVVLTDECP 120

Query: 122 GGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAGS 181
           GG C S+ VHFDLSGTAFGAMA   +AD+LR  GVLQIQY RV C +GG  + F VDAGS
Sbjct: 121 GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNWGGVMLTFAVDAGS 180

Query: 182 NPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRLT 241
           NP+YFA L++YENGDG L  ++L Q      W PM+QSWGAVWKL  G+AL+AP S RLT
Sbjct: 181 NPSYFAVLVKYENGDGDLSGMDLMQTGAGAAWTPMQQSWGAVWKLSAGAALQAPLSIRLT 240

Query: 242 ALESRKAVVANNVIPAGWQPGKTYRSVVNF 272
           +  S K +VA+NVIP+GW+PG +Y S VN+
Sbjct: 241 S-SSGKTLVASNVIPSGWKPGASYTSTVNY 264

[Close]

BLAST of Carg24177 vs. ExPASy Swiss-Prot
Match: Q7XT39 (Expansin-B5 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB5 PE=2 SV=2)

HSP 1 Score: 296.6 bits (758), Expect = 2.9e-79
Identity = 147/234 (62.82%), Postives = 176/234 (75.21%), Query Frame = 0


Query: 42  GWSPAVATWYGSPVGAGSDGGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKC 101
           GWS   ATWYG P G GS+GGACGY SAVG+ PFSS+IAAGGPSLFK+GKGCG+CYQ+KC
Sbjct: 44  GWSSGGATWYGGPQGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIKC 103

Query: 102 SVKGACSRNPVTVVITDSCPGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQY 161
           +   ACS  PVTVVITDSCPGG C ++A HFD+SGTAFGAMA     D LR+ GVL+IQY
Sbjct: 104 TGNRACSGRPVTVVITDSCPGGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQY 163

Query: 162 KRVECKYGGSSIQFVVDAGSNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWG 221
           KRV C++   ++ F VDAGSNP Y A L++Y NGDG L +V + +A+G G W  M+QSWG
Sbjct: 164 KRVPCRF-AMNVAFKVDAGSNPYYLAILVQYANGDGDLAAVHIMEARGGGGWKAMQQSWG 223

Query: 222 AVWKL--DYGSALKAPFSFRLTALESRKAVVANNVIPAGWQPGKTYRSVVNFKA 274
           A W+L  + G  L  PFS RLT+  S K +VANNVIP+GWQ G TYRS VN+ A
Sbjct: 224 ATWRLNSNTGKPLSPPFSIRLTS-GSGKVLVANNVIPSGWQAGLTYRSTVNYAA 275

[Close]

BLAST of Carg24177 vs. ExPASy Swiss-Prot
Match: Q6H676 (Expansin-B11 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB11 PE=2 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 5.5e-78
Identity = 147/244 (60.25%), Postives = 182/244 (74.59%), Query Frame = 0


Query: 30  NLSNYDSYDSNSGWSPAVATWYGSPVGAGSDGGACGYGSAVGKPPFSSLIAAGGPSLFKS 89
           N +   S    +GW+ A AT+YG+P G GSDGGACGY +AVG+ PFSS+IAAG PSL+K 
Sbjct: 51  NYTGSPSVTVTTGWAAAGATYYGAPNGDGSDGGACGYQTAVGQRPFSSMIAAGSPSLYKG 110

Query: 90  GKGCGACYQVKCSVKGACSRNPVTVVITDSCPGGSCASDAVHFDLSGTAFGAMAASRRAD 149
           GKGCGACY+VKC+   ACS  P TVVITD CPGG C + A HFD+SGT+ GAMA    AD
Sbjct: 111 GKGCGACYEVKCTTNAACSGQPATVVITDECPGGICLAGAAHFDMSGTSMGAMAKPGMAD 170

Query: 150 ELRNLGVLQIQYKRVECKYGGSSIQFVVDAGSNPNYFATLIEYENGDGVLGSVELKQAQG 209
           +LR  G+LQ+QY+RV CKY G +I F VD G+NP YF  LIE+E+GDG L +V+L +A G
Sbjct: 171 KLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNAVDLMEA-G 230

Query: 210 SGPWIPMKQSWGAVWKL--DYGSALKAPFSFRLTALESRKAVVANNVIPAGWQPGKTYRS 269
            G W PM Q+WGA+W+   + G ALKAPFS RLT+ +S K +VANNVIPA W+PG TYRS
Sbjct: 231 CG-WTPMVQNWGALWRYNSNTGKALKAPFSLRLTS-DSGKVLVANNVIPASWKPGVTYRS 290

Query: 270 VVNF 272
           +VN+
Sbjct: 291 LVNY 291

[Close]

BLAST of Carg24177 vs. ExPASy TrEMBL
Match: A0A6J1G2E5 (putative expansin-B2 OS=Cucurbita moschata OX=3662 GN=LOC111450027 PE=3 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 5.4e-153
Identity = 269/273 (98.53%), Postives = 271/273 (99.27%), Query Frame = 0


Query: 1   MMNLKHSLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSD 60
           MMN KHSLFFATLLSLSLTPCFCFNPKSLNLSNY+SYDSNSGWSPAVATWYGSPVGAGSD
Sbjct: 1   MMNFKHSLFFATLLSLSLTPCFCFNPKSLNLSNYESYDSNSGWSPAVATWYGSPVGAGSD 60

Query: 61  GGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC 120
           GGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC
Sbjct: 61  GGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC 120

Query: 121 PGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAG 180
           PGGSCASDAVHFDLSGTAFGAMA SRRADELRNLGVLQIQYKRVECKYGG+SIQFVVDAG
Sbjct: 121 PGGSCASDAVHFDLSGTAFGAMAVSRRADELRNLGVLQIQYKRVECKYGGTSIQFVVDAG 180

Query: 181 SNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRL 240
           SNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRL
Sbjct: 181 SNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRL 240

Query: 241 TALESRKAVVANNVIPAGWQPGKTYRSVVNFKA 274
           TALESRKAVVANNVIPAGWQPGKTYRSVVNFKA
Sbjct: 241 TALESRKAVVANNVIPAGWQPGKTYRSVVNFKA 273

[Close]

BLAST of Carg24177 vs. ExPASy TrEMBL
Match: A0A6J1IH10 (putative expansin-B2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472879 PE=3 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 3.6e-149
Identity = 261/272 (95.96%), Postives = 266/272 (97.79%), Query Frame = 0


Query: 1   MMNLKHSLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSD 60
           MMN KHSLFFA LLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSP VATWYGSPVGAGSD
Sbjct: 1   MMNFKHSLFFAALLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPGVATWYGSPVGAGSD 60

Query: 61  GGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC 120
           GGACGYG+AVG+PPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC
Sbjct: 61  GGACGYGNAVGEPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC 120

Query: 121 PGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAG 180
           PGGSCASDAVHFDLSGTAFGAMAASRR DELRNLGVLQ+QYKRVECKYGG+SIQFVVDAG
Sbjct: 121 PGGSCASDAVHFDLSGTAFGAMAASRRGDELRNLGVLQVQYKRVECKYGGTSIQFVVDAG 180

Query: 181 SNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRL 240
           SNPNYFA LIEY+NGDGVLGSVELKQAQGSG WIPMKQSWGAVWKLDYGSALKAPFSFRL
Sbjct: 181 SNPNYFAALIEYQNGDGVLGSVELKQAQGSGSWIPMKQSWGAVWKLDYGSALKAPFSFRL 240

Query: 241 TALESRKAVVANNVIPAGWQPGKTYRSVVNFK 273
           TALESRKAVVANNVIPAGWQPGKTYRSVVNFK
Sbjct: 241 TALESRKAVVANNVIPAGWQPGKTYRSVVNFK 272

[Close]

BLAST of Carg24177 vs. ExPASy TrEMBL
Match: A0A6J1E9X0 (putative expansin-B2 OS=Cucurbita moschata OX=3662 GN=LOC111432169 PE=3 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.7e-114
Identity = 208/265 (78.49%), Postives = 228/265 (86.04%), Query Frame = 0


Query: 7   SLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSDGGACGY 66
           SL F  LLSLSLTPCFCF+PKS N+S Y SYD +  WSPA+ATWYG+P GAGSDGG+CGY
Sbjct: 15  SLLFPALLSLSLTPCFCFHPKSFNVSMYQSYDPD--WSPAIATWYGTPNGAGSDGGSCGY 74

Query: 67  GSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSCPGGSCA 126
           G AV +PPFSSLIAAGGPSL+KSGK CGACYQVKCS +GACS  PVTVVITDSCPGGSCA
Sbjct: 75  GKAVEEPPFSSLIAAGGPSLYKSGKACGACYQVKCSGEGACSGGPVTVVITDSCPGGSCA 134

Query: 127 SDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAGSNPNYF 186
           SD+VHFDLSGTAFGAMAA+ RADELR+LGVL IQ+K VEC Y G+SI F+VD+GSNPNYF
Sbjct: 135 SDSVHFDLSGTAFGAMAATGRADELRSLGVLHIQHKSVECNYPGTSINFIVDSGSNPNYF 194

Query: 187 ATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRLTALESR 246
           A LIEYE+GDG LG VELK A  S  WIPMKQSWGAVWKLD  SAL+ PFS RLTAL+S 
Sbjct: 195 AVLIEYEDGDGELGLVELKPALNSYSWIPMKQSWGAVWKLDSASALQPPFSLRLTALDSG 254

Query: 247 KAVVANNVIPAGWQPGKTYRSVVNF 272
           K VVANNVIP GWQPG+TYRSVVNF
Sbjct: 255 KTVVANNVIPVGWQPGQTYRSVVNF 277

[Close]

BLAST of Carg24177 vs. ExPASy TrEMBL
Match: A0A1S3AUH4 (putative expansin-B2 OS=Cucumis melo OX=3656 GN=LOC103483118 PE=3 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.4e-113
Identity = 212/271 (78.23%), Postives = 235/271 (86.72%), Query Frame = 0


Query: 4   LKHSLFFATL-LSLSLTP-CFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSDG 63
           + H LFFA L +SLSLTP  FCF+PKS N+S Y SYDS+  WSPAVATWYG P GAGSDG
Sbjct: 1   MTHFLFFAALIISLSLTPTSFCFHPKSFNVSKYQSYDSD--WSPAVATWYGPPDGAGSDG 60

Query: 64  GACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSCP 123
           G+CGYG AV +PPFSS IAAGGPSL+K+G+ CGACYQVKCS + ACS NPVTVVITDSCP
Sbjct: 61  GSCGYGKAVEQPPFSSFIAAGGPSLYKNGQACGACYQVKCSGESACSGNPVTVVITDSCP 120

Query: 124 GGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAGS 183
           GGSCASD+VHFDLSGTAFGAMAA+ RA+ELR+LGVL IQ+KRVEC Y G+SI F+VD+GS
Sbjct: 121 GGSCASDSVHFDLSGTAFGAMAATGRAEELRSLGVLHIQHKRVECNYPGTSINFIVDSGS 180

Query: 184 NPNYFATLIEYENGDGVLGSVELKQ-AQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRL 243
           N NYFA LIEYE+GDG LGSVELKQ A  S  WIPMK+SWGAVWKLDYGSAL+APFS RL
Sbjct: 181 NSNYFAALIEYEDGDGELGSVELKQGALDSNSWIPMKRSWGAVWKLDYGSALQAPFSLRL 240

Query: 244 TALESRKAVVANNVIPAGWQPGKTYRSVVNF 272
           TALES K VVANNVIPAGWQPGK+YRSVVNF
Sbjct: 241 TALESGKTVVANNVIPAGWQPGKSYRSVVNF 269

[Close]

BLAST of Carg24177 vs. ExPASy TrEMBL
Match: A0A6J1IR92 (putative expansin-B2 OS=Cucurbita maxima OX=3661 GN=LOC111479279 PE=3 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 6.7e-111
Identity = 205/265 (77.36%), Postives = 224/265 (84.53%), Query Frame = 0


Query: 7   SLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSDGGACGY 66
           SL F  LLSLSLTPCFCF  KS N+S Y SYD +  WSPA+ATWYG+P GAGSDGG+CGY
Sbjct: 14  SLLFPALLSLSLTPCFCFPLKSFNVSMYQSYDLD--WSPAIATWYGTPNGAGSDGGSCGY 73

Query: 67  GSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSCPGGSCA 126
             AV +PPFSSLIAAGGPSL+KSGK CGACYQVKCS +GACS +PVTVVITDSCPGGSCA
Sbjct: 74  EKAVEEPPFSSLIAAGGPSLYKSGKACGACYQVKCSGEGACSGSPVTVVITDSCPGGSCA 133

Query: 127 SDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAGSNPNYF 186
           SD+VHFDLSGTAFGAMAA  RADELR+LGVL IQ+KRVEC Y G+SI F+VD+GSNPNYF
Sbjct: 134 SDSVHFDLSGTAFGAMAAPGRADELRSLGVLHIQHKRVECNYPGTSINFIVDSGSNPNYF 193

Query: 187 ATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRLTALESR 246
           A LIEYE+GDG LG VELK A  S  WIPM+QSWGAVWKLD  SAL+ PFS RLTAL S 
Sbjct: 194 AVLIEYEDGDGELGLVELKPALNSYSWIPMQQSWGAVWKLDSASALQPPFSLRLTALGSG 253

Query: 247 KAVVANNVIPAGWQPGKTYRSVVNF 272
           K VVAN VIP GWQPG+TYRSVVNF
Sbjct: 254 KTVVANKVIPVGWQPGQTYRSVVNF 276

[Close]

BLAST of Carg24177 vs. TAIR 10
Match: AT1G65680.1 (expansin B2 )

HSP 1 Score: 336.7 bits (862), Expect = 1.8e-92
Identity = 172/271 (63.47%), Postives = 204/271 (75.28%), Query Frame = 0


Query: 1   MMNLKHSLFFATLLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSD 60
           +MNL   LF  T L L+LT   CF+PK  N+S   + DS+  WS A +TWYG+P G GSD
Sbjct: 12  LMNL---LFALTCLLLNLT--HCFSPKKFNISAATTSDSD--WSIAGSTWYGNPTGYGSD 71

Query: 61  GGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSC 120
           GGACGYG+AV +PPFS +++AGGPSLFKSGKGCGACYQVKC+ K ACS+NPVTVVITD C
Sbjct: 72  GGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSACSKNPVTVVITDEC 131

Query: 121 PGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAG 180
           PG  C  ++VHFDLSGTAFGAMA S +  +LRN+G LQI YK+VEC Y G ++ F VD G
Sbjct: 132 PG--CVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQVDKG 191

Query: 181 SNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRL 240
           SN N FA L+ Y NGDG +G +ELKQA  S  W+ M QSWGAVWKLD  S L+AP S R+
Sbjct: 192 SNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQSWGAVWKLDVSSPLRAPLSLRV 251

Query: 241 TALESRKAVVANNVIPAGWQPGKTYRSVVNF 272
           T+LES K VVA+NVIPA WQPG  Y+S VNF
Sbjct: 252 TSLESGKTVVASNVIPANWQPGAIYKSNVNF 273

[Close]

BLAST of Carg24177 vs. TAIR 10
Match: AT2G45110.1 (expansin B4 )

HSP 1 Score: 275.8 bits (704), Expect = 3.8e-74
Identity = 139/259 (53.67%), Postives = 183/259 (70.66%), Query Frame = 0


Query: 13  LLSLSLTPCFCFNPKSLNLSNYDSYDSNSGWSPAVATWYGSPVGAGSDGGACGYGSAVGK 72
           L ++SL  C+C N         ++ D  +G   A  TWYG P GAGS GGACGYGSAV  
Sbjct: 13  LFAVSLKFCYCQN---------ETIDV-AGSGTAGVTWYGEPFGAGSTGGACGYGSAVAN 72

Query: 73  PPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTVVITDSCPGGSCASDAVHF 132
           PP  ++++AGGPSLF +GKGCG CYQV C    ACS +P+TV ITD CPGG CAS+ VH 
Sbjct: 73  PPLYAMVSAGGPSLFNNGKGCGTCYQVVCIGHPACSGSPITVTITDECPGGPCASEPVHI 132

Query: 133 DLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQFVVDAGSNPNYFATLIEY 192
           DLSG A GA+A   +AD+LR+ GV+++ YKR  C Y G++I F +DAG+NP Y + ++EY
Sbjct: 133 DLSGKAMGALAKPGQADQLRSAGVIRVNYKRAACLYRGTNIVFRMDAGANPYYISFVVEY 192

Query: 193 ENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKAPFSFRLTALESRKAVVAN 252
           ENGDG L +VE++ A GS  +I M++   AVWK++ GSAL+ PF+ RLT+ ES K +VA 
Sbjct: 193 ENGDGDLSNVEIQPAGGS--FISMQEMRSAVWKVNSGSALRGPFNIRLTSGESHKVIVAY 252

Query: 253 NVIPAGWQPGKTYRSVVNF 272
           NVIPA W+P ++YRS+VNF
Sbjct: 253 NVIPANWKPDESYRSIVNF 259

[Close]

BLAST of Carg24177 vs. TAIR 10
Match: AT1G65681.1 (beta expansin 6 )

HSP 1 Score: 248.1 bits (632), Expect = 8.4e-66
Identity = 119/218 (54.59%), Postives = 156/218 (71.56%), Query Frame = 0


Query: 55  VGAGSDGGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCSVKGACSRNPVTV 114
           +GAGS GGACG+  AV  PP   +++AGGPS+F +G GCG C+Q+ C+   ACSR P+TV
Sbjct: 10  LGAGSTGGACGF--AVANPPLYGMVSAGGPSVFNNGIGCGTCFQILCNGHPACSRRPITV 69

Query: 115 VITDSCPGGSCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQYKRVECKYGGSSIQ 174
            ITD CPGG CAS+  HFDLSG A GA+A   + D LR+ GVL++ Y+RVEC Y  ++I 
Sbjct: 70  TITDECPGGPCASEPAHFDLSGKAMGALARPGQGDRLRSAGVLRVYYRRVECLYRRTNIA 129

Query: 175 FVVDAGSNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWGAVWKLDYGSALKA 234
           F +D G+NP Y + ++EYENGDG L  +E++ A G   +IPM++   AVWK+  GS L  
Sbjct: 130 FRMDPGANPYYISFVVEYENGDGDLAYIEIQPADGE--FIPMQEMRSAVWKISSGSPLTG 189

Query: 235 PFSFRLTALESRKAVVANNVIPAGWQPGKTYRSVVNFK 273
           PF+ RLT+ ES K V+A NVIPA W+P +TYRSVVNFK
Sbjct: 190 PFNIRLTSAESHKVVLAYNVIPANWKPNETYRSVVNFK 223

[Close]

BLAST of Carg24177 vs. TAIR 10
Match: AT4G28250.1 (expansin B3 )

HSP 1 Score: 235.7 bits (600), Expect = 4.3e-62
Identity = 117/241 (48.55%), Postives = 158/241 (65.56%), Query Frame = 0


Query: 31  LSNYDSYDSNSGWSPAVATWYGSPVGAGSDGGACGYGSAVGKPPFSSLIAAGGPSLFKSG 90
           L+  + + SNS W PAVATWYGSP G GSDGGACGYG+ V   P  + + A  P LFK+G
Sbjct: 24  LATTNRHVSNSHWLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFKNG 83

Query: 91  KGCGACYQVKCSVKGACSRNPVTVVITDSCPGGSCASDAVHFDLSGTAFGAMAASRRADE 150
           +GCGACY+V+C  K  CSR  VTV+ITD CPG  C+  + HFDLSG  FG +A +  +  
Sbjct: 84  EGCGACYKVRCLDKSICSRRAVTVIITDECPG--CSKTSTHFDLSGAVFGRLAIAGESGP 143

Query: 151 LRNLGVLQIQYKRVECKYGGSSIQFVVDAGSNPNYFATLIEYENGDGVLGSVELKQAQGS 210
           LRN G++ + Y+R  CKY G +I F V+ GS   + + L+E+E+G+G +GS+ ++QA G+
Sbjct: 144 LRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQA-GA 203

Query: 211 GPWIPMKQSWGAVWKLDYGSALKAPFSFRLTALESRKAVVANNVIPAGWQPGKTYRSVVN 270
             W+ MK  WGA W +  G  LK PFS +LT L + K + A +V+P  W P  TY S +N
Sbjct: 204 REWLEMKHVWGANWCI-IGGPLKGPFSIKLTTLSAGKTLSATDVVPRNWAPKATYSSRLN 260

Query: 271 F 272
           F
Sbjct: 264 F 260

[Close]

BLAST of Carg24177 vs. TAIR 10
Match: AT2G20750.1 (expansin B1 )

HSP 1 Score: 223.8 bits (569), Expect = 1.7e-58
Identity = 117/230 (50.87%), Postives = 146/230 (63.48%), Query Frame = 0


Query: 43  WSPAVATWYGSPVGAGSDGGACGYGSAVGKPPFSSLIAAGGPSLFKSGKGCGACYQVKCS 102
           W PA ATWYGS  G GS GGACGYGS V   PF + + A  P LFK G+GCGACY+V+C 
Sbjct: 40  WLPATATWYGSAEGDGSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGACYKVRCL 99

Query: 103 VKGACSRNPVTVVITDSCPGG-SCASDAVHFDLSGTAFGAMAASRRADELRNLGVLQIQY 162
            K  CS+  VT++ TD  P G S  +   HFDLSG AFG MA       +RN G+L I Y
Sbjct: 100 DKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMAIPGHNGVIRNRGLLNILY 159

Query: 163 KRVECKYGGSSIQFVVDAGSNPNYFATLIEYENGDGVLGSVELKQAQGSGPWIPMKQSWG 222
           +R  CKY G +I F V+AGS   + + LIEYE+G+G +GS+ ++QA GS  WI MK  WG
Sbjct: 160 RRTACKYRGKNIAFHVNAGSTDYWLSLLIEYEDGEGDIGSMHIRQA-GSKEWISMKHIWG 219

Query: 223 AVWKLDYGSALKAPFSFRLTALESRKAVVANNVIPAGWQPGKTYRSVVNF 272
           A W +  G  LK PFS +LT L + K + A +VIP+ W P  TY S +NF
Sbjct: 220 ANWCIVEG-PLKGPFSVKLTTLSNNKTLSATDVIPSNWVPKATYTSRLNF 267

The following BLAST results are available for this feature:

BLAST of Carg24177 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597020.1	2.0e-154	100.00	putative expansin-B2, partial [Cucurbita argyrosperma subsp. sororia] >KAG702849...	[more]
XP_022945938.1	1.1e-152	98.53	putative expansin-B2 [Cucurbita moschata]	[more]
XP_023539434.1	4.4e-149	96.70	putative expansin-B2 [Cucurbita pepo subsp. pepo]	[more]
XP_022974239.1	7.5e-149	95.96	putative expansin-B2 isoform X1 [Cucurbita maxima] >XP_022974242.1 putative expa...	[more]
XP_023521638.1	3.8e-137	96.43	putative expansin-B2, partial [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg24177 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHY6	2.5e-91	63.47	Putative expansin-B2 OS=Arabidopsis thaliana OX=3702 GN=EXPB2 PE=3 SV=2	[more]
Q7XT40	3.9e-84	66.23	Expansin-B15 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB15 PE=3 SV=2	[more]
Q5W6Z9	7.4e-83	57.78	Expansin-B18 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB18 PE=2 SV=1	[more]
Q7XT39	2.9e-79	62.82	Expansin-B5 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB5 PE=2 SV=2	[more]
Q6H676	5.5e-78	60.25	Expansin-B11 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPB11 PE=2 SV=1	[more]

BLAST of Carg24177 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2E5	5.4e-153	98.53	putative expansin-B2 OS=Cucurbita moschata OX=3662 GN=LOC111450027 PE=3 SV=1	[more]
A0A6J1IH10	3.6e-149	95.96	putative expansin-B2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472879 PE=3...	[more]
A0A6J1E9X0	1.7e-114	78.49	putative expansin-B2 OS=Cucurbita moschata OX=3662 GN=LOC111432169 PE=3 SV=1	[more]
A0A1S3AUH4	1.4e-113	78.23	putative expansin-B2 OS=Cucumis melo OX=3656 GN=LOC103483118 PE=3 SV=1	[more]
A0A6J1IR92	6.7e-111	77.36	putative expansin-B2 OS=Cucurbita maxima OX=3661 GN=LOC111479279 PE=3 SV=1	[more]

BLAST of Carg24177 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65680.1	1.8e-92	63.47	expansin B2	[more]
AT2G45110.1	3.8e-74	53.67	expansin B4	[more]
AT1G65681.1	8.4e-66	54.59	beta expansin 6	[more]
AT4G28250.1	4.3e-62	48.55	expansin B3	[more]
AT2G20750.1	1.7e-58	50.87	expansin B1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007118	Expansin/Lol pI	PRINTS	PR01225	EXPANSNFAMLY	coord: 154..170 score: 36.03 coord: 213..227 score: 43.0 coord: 253..267 score: 46.0 coord: 60..78 score: 38.42 coord: 83..101 score: 46.97 coord: 42..57 score: 45.62
IPR005795	Major pollen allergen Lol pI	PRINTS	PR00829	LOLP1ALLERGN	coord: 222..239 score: 42.93 coord: 175..190 score: 59.66 coord: 81..92 score: 46.21 coord: 121..136 score: 38.64 coord: 143..158 score: 29.55 coord: 191..206 score: 36.36
IPR007112	Expansin/pollen allergen, DPBB domain	SMART	SM00837	dpbb_1	coord: 79..161 e-value: 5.0E-7 score: 39.3
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 61..171 score: 31.43749
IPR009009	RlpA-like protein, double-psi beta-barrel domain	PFAM	PF03330	DPBB_1	coord: 80..161 e-value: 9.2E-18 score: 64.3
IPR036749	Expansin, cellulose-binding-like domain superfamily	GENE3D	2.60.40.760		coord: 168..272 e-value: 4.0E-34 score: 118.5
IPR036749	Expansin, cellulose-binding-like domain superfamily	SUPERFAMILY	49590	PHL pollen allergen	coord: 172..267
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Expansin_C	coord: 173..256 e-value: 3.0E-26 score: 91.2
IPR007117	Expansin, cellulose-binding-like domain	PROSITE	PS50843	EXPANSIN_CBD	coord: 184..267 score: 25.52103
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 26..167 e-value: 1.2E-46 score: 160.2
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 42..191
None	No IPR available	PANTHER	PTHR31692:SF57	EXPANSIN-B2-RELATED	coord: 10..272
None	No IPR available	PANTHER	PTHR31692	EXPANSIN-B3	coord: 10..272

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24177-RA	Carg24177-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019953	sexual reproduction
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane