Carg24155 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg24155
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DUF4408 domain-containing protein
Location	Carg_Chr02: 1711455 .. 1712273 (-)
RNA-Seq Expression	Carg24155
Synteny	Carg24155

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCTGTCGGTTTCTGCGACATAAGAACGGAGAAGATGAACGCGATTCTTAAGTATCGACAGCTCAGGAAAATTGCTAACCTGTTTCGGTTCATCGAGTTGTGTTTGATTCTCGTCGTGATCTCGAAATTATCTATCCATCTGCCGAGCGCCTTCAAGAATTCTGGAGAGTACTTCCGGTGCTTGTCGATGACTTTGATTAGTCCTCGCTTCGTGTTTCTGATCGGAAACGCGATAGTCATCACTCTGTTCGCTAAATCGGGACAGTTCTCTGGTACGGATCTGAGCAAGAAGAATTCGGTTGCCGATCTTTACGAGGAGTTCATCCAAAACAGCGAGAAGAATCAAAGAACTCGTCGCGCCGAGATCAAGTACCGAATCAAGCAGACCGATAGCGGCAGCGGCAACGTCCAAGGCGACGCCTCCATCGATTATCGAATCAAGCAGATCGATAGCGGAAGCGGAAGCGGAAACGTCCATGGCGACGCCTCCATCAAGTACCGAATCAAGCAGATCGATAGCGGAAGCGGCAACGCCTCAATCGCGATAAAGAAAATCGGTAATCCTGAAGAAATCAAACATTATCGTAGGAGTCAGTCGGAGAAAATAGCGGTGGTACAGCGAGAGAATCCGCACAGCAAACTGAGCCGATCAGAAACAGAAAAAAGCAAAAAAATCGTCCGATTGAGTGAAGGAACAGAACAAATCTCGTATCCGGAAGATGGAATGAGCAACGAGGAGTTCCAGGAGATGGTGGAGGCGTTCATAGCGCGGCAGCAGAGATTGAGAAGGGAGGAAGAATTCTGTGGATTTTAG

mRNA sequence

ATGGAGTCTGTCGGTTTCTGCGACATAAGAACGGAGAAGATGAACGCGATTCTTAAGTATCGACAGCTCAGGAAAATTGCTAACCTGTTTCGGTTCATCGAGTTGTGTTTGATTCTCGTCGTGATCTCGAAATTATCTATCCATCTGCCGAGCGCCTTCAAGAATTCTGGAGAGTACTTCCGGTGCTTGTCGATGACTTTGATTAGTCCTCGCTTCGTGTTTCTGATCGGAAACGCGATAGTCATCACTCTGTTCGCTAAATCGGGACAGTTCTCTGGTACGGATCTGAGCAAGAAGAATTCGGTTGCCGATCTTTACGAGGAGTTCATCCAAAACAGCGAGAAGAATCAAAGAACTCGTCGCGCCGAGATCAAGTACCGAATCAAGCAGACCGATAGCGGCAGCGGCAACGTCCAAGGCGACGCCTCCATCGATTATCGAATCAAGCAGATCGATAGCGGAAGCGGAAGCGGAAACGTCCATGGCGACGCCTCCATCAAGTACCGAATCAAGCAGATCGATAGCGGAAGCGGCAACGCCTCAATCGCGATAAAGAAAATCGGTAATCCTGAAGAAATCAAACATTATCGTAGGAGTCAGTCGGAGAAAATAGCGGTGGTACAGCGAGAGAATCCGCACAGCAAACTGAGCCGATCAGAAACAGAAAAAAGCAAAAAAATCGTCCGATTGAGTGAAGGAACAGAACAAATCTCGTATCCGGAAGATGGAATGAGCAACGAGGAGTTCCAGGAGATGGTGGAGGCGTTCATAGCGCGGCAGCAGAGATTGAGAAGGGAGGAAGAATTCTGTGGATTTTAG

Coding sequence (CDS)

ATGGAGTCTGTCGGTTTCTGCGACATAAGAACGGAGAAGATGAACGCGATTCTTAAGTATCGACAGCTCAGGAAAATTGCTAACCTGTTTCGGTTCATCGAGTTGTGTTTGATTCTCGTCGTGATCTCGAAATTATCTATCCATCTGCCGAGCGCCTTCAAGAATTCTGGAGAGTACTTCCGGTGCTTGTCGATGACTTTGATTAGTCCTCGCTTCGTGTTTCTGATCGGAAACGCGATAGTCATCACTCTGTTCGCTAAATCGGGACAGTTCTCTGGTACGGATCTGAGCAAGAAGAATTCGGTTGCCGATCTTTACGAGGAGTTCATCCAAAACAGCGAGAAGAATCAAAGAACTCGTCGCGCCGAGATCAAGTACCGAATCAAGCAGACCGATAGCGGCAGCGGCAACGTCCAAGGCGACGCCTCCATCGATTATCGAATCAAGCAGATCGATAGCGGAAGCGGAAGCGGAAACGTCCATGGCGACGCCTCCATCAAGTACCGAATCAAGCAGATCGATAGCGGAAGCGGCAACGCCTCAATCGCGATAAAGAAAATCGGTAATCCTGAAGAAATCAAACATTATCGTAGGAGTCAGTCGGAGAAAATAGCGGTGGTACAGCGAGAGAATCCGCACAGCAAACTGAGCCGATCAGAAACAGAAAAAAGCAAAAAAATCGTCCGATTGAGTGAAGGAACAGAACAAATCTCGTATCCGGAAGATGGAATGAGCAACGAGGAGTTCCAGGAGATGGTGGAGGCGTTCATAGCGCGGCAGCAGAGATTGAGAAGGGAGGAAGAATTCTGTGGATTTTAG

Protein sequence

MESVGFCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYFRCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTRRAEIKYRIKQTDSGSGNVQGDASIDYRIKQIDSGSGSGNVHGDASIKYRIKQIDSGSGNASIAIKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYPEDGMSNEEFQEMVEAFIARQQRLRREEEFCGF

Homology

[Close]

BLAST of Carg24155 vs. NCBI nr
Match: KAG7035078.1 (hypothetical protein SDJN02_01873, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 515.8 bits (1327), Expect = 2.3e-142
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 1   MESVGFCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYF 60
           MESVGFCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYF
Sbjct: 1   MESVGFCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYF 60

Query: 61  RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTR 120
           RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTR
Sbjct: 61  RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTR 120

Query: 121 RAEIKYRIKQTDSGSGNVQGDASIDYRIKQIDSGSGSGNVHGDASIKYRIKQIDSGSGNA 180
           RAEIKYRIKQTDSGSGNVQGDASIDYRIKQIDSGSGSGNVHGDASIKYRIKQIDSGSGNA
Sbjct: 121 RAEIKYRIKQTDSGSGNVQGDASIDYRIKQIDSGSGSGNVHGDASIKYRIKQIDSGSGNA 180

Query: 181 SIAIKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYP 240
           SIAIKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYP
Sbjct: 181 SIAIKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYP 240

Query: 241 EDGMSNEEFQEMVEAFIARQQRLRREEEFCGF 273
           EDGMSNEEFQEMVEAFIARQQRLRREEEFCGF
Sbjct: 241 EDGMSNEEFQEMVEAFIARQQRLRREEEFCGF 272

[Close]

BLAST of Carg24155 vs. NCBI nr
Match: KAG6605068.1 (hypothetical protein SDJN03_02385, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 514.2 bits (1323), Expect = 6.7e-142
Identity = 271/272 (99.63%), Postives = 271/272 (99.63%), Query Frame = 0


Query: 1   MESVGFCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYF 60
           MESVGFCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYF
Sbjct: 1   MESVGFCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYF 60

Query: 61  RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTR 120
           RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTR
Sbjct: 61  RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTR 120

Query: 121 RAEIKYRIKQTDSGSGNVQGDASIDYRIKQIDSGSGSGNVHGDASIKYRIKQIDSGSGNA 180
           RAEIKYRIKQTDSGSGNVQGDASIDYRIKQIDSGSGSGNVHGDASIKYRIKQIDSGSGNA
Sbjct: 121 RAEIKYRIKQTDSGSGNVQGDASIDYRIKQIDSGSGSGNVHGDASIKYRIKQIDSGSGNA 180

Query: 181 SIAIKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYP 240
           SI IKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYP
Sbjct: 181 SITIKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYP 240

Query: 241 EDGMSNEEFQEMVEAFIARQQRLRREEEFCGF 273
           EDGMSNEEFQEMVEAFIARQQRLRREEEFCGF
Sbjct: 241 EDGMSNEEFQEMVEAFIARQQRLRREEEFCGF 272

[Close]

BLAST of Carg24155 vs. NCBI nr
Match: XP_023532809.1 (uncharacterized protein LOC111794869 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 509.6 bits (1311), Expect = 1.7e-140
Identity = 269/272 (98.90%), Postives = 269/272 (98.90%), Query Frame = 0


Query: 1   MESVGFCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYF 60
           MESV FCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYF
Sbjct: 1   MESVSFCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYF 60

Query: 61  RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTR 120
           RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTR
Sbjct: 61  RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTR 120

Query: 121 RAEIKYRIKQTDSGSGNVQGDASIDYRIKQIDSGSGSGNVHGDASIKYRIKQIDSGSGNA 180
           RAEIKYRIKQ DSGSGNVQGDASIDYRIKQIDSGSGSGNVHGDASIKYRIKQIDSGSGNA
Sbjct: 121 RAEIKYRIKQIDSGSGNVQGDASIDYRIKQIDSGSGSGNVHGDASIKYRIKQIDSGSGNA 180

Query: 181 SIAIKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYP 240
           SI IKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYP
Sbjct: 181 SITIKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYP 240

Query: 241 EDGMSNEEFQEMVEAFIARQQRLRREEEFCGF 273
           EDGMSNEEFQEMVEAFIARQQRLRREEEFCGF
Sbjct: 241 EDGMSNEEFQEMVEAFIARQQRLRREEEFCGF 272

[Close]

BLAST of Carg24155 vs. NCBI nr
Match: XP_022948013.1 (uncharacterized protein LOC111451717 [Cucurbita moschata])

HSP 1 Score: 457.2 bits (1175), Expect = 9.8e-125
Identity = 248/272 (91.18%), Postives = 248/272 (91.18%), Query Frame = 0


Query: 1   MESVGFCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYF 60
           MESVGFCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYF
Sbjct: 1   MESVGFCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYF 60

Query: 61  RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTR 120
           RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTR
Sbjct: 61  RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTR 120

Query: 121 RAEIKYRIKQTDSGSGNVQGDASIDYRIKQIDSGSGSGNVHGDASIKYRIKQIDSGSGNA 180
           RAEIKYRIKQTD                        SGNVHGDASIKYRIKQIDSGSGNA
Sbjct: 121 RAEIKYRIKQTD------------------------SGNVHGDASIKYRIKQIDSGSGNA 180

Query: 181 SIAIKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYP 240
           SIAIKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYP
Sbjct: 181 SIAIKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYP 240

Query: 241 EDGMSNEEFQEMVEAFIARQQRLRREEEFCGF 273
           EDGMSNEEFQEMVEAFIARQQRLRREEEFCGF
Sbjct: 241 EDGMSNEEFQEMVEAFIARQQRLRREEEFCGF 248

[Close]

BLAST of Carg24155 vs. NCBI nr
Match: XP_023006908.1 (uncharacterized protein LOC111499556 [Cucurbita maxima])

HSP 1 Score: 444.5 bits (1142), Expect = 6.6e-121
Identity = 241/272 (88.60%), Postives = 243/272 (89.34%), Query Frame = 0


Query: 1   MESVGFCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYF 60
           MESV FCDIRTE+MN ILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKN GEYF
Sbjct: 1   MESVSFCDIRTERMNTILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNFGEYF 60

Query: 61  RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTR 120
           RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTR
Sbjct: 61  RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTR 120

Query: 121 RAEIKYRIKQTDSGSGNVQGDASIDYRIKQIDSGSGSGNVHGDASIKYRIKQIDSGSGNA 180
           RAEIKYRIKQ D                        SGNVHGDASIKYRI+QIDSGSGNA
Sbjct: 121 RAEIKYRIKQID------------------------SGNVHGDASIKYRIQQIDSGSGNA 180

Query: 181 SIAIKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYP 240
           SI IKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYP
Sbjct: 181 SIVIKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYP 240

Query: 241 EDGMSNEEFQEMVEAFIARQQRLRREEEFCGF 273
           EDGMSNEEFQEMVEAFIARQQRLRREEEFCGF
Sbjct: 241 EDGMSNEEFQEMVEAFIARQQRLRREEEFCGF 248

[Close]

BLAST of Carg24155 vs. ExPASy TrEMBL
Match: A0A6J1G874 (uncharacterized protein LOC111451717 OS=Cucurbita moschata OX=3662 GN=LOC111451717 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 4.7e-125
Identity = 248/272 (91.18%), Postives = 248/272 (91.18%), Query Frame = 0


Query: 1   MESVGFCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYF 60
           MESVGFCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYF
Sbjct: 1   MESVGFCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYF 60

Query: 61  RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTR 120
           RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTR
Sbjct: 61  RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTR 120

Query: 121 RAEIKYRIKQTDSGSGNVQGDASIDYRIKQIDSGSGSGNVHGDASIKYRIKQIDSGSGNA 180
           RAEIKYRIKQTD                        SGNVHGDASIKYRIKQIDSGSGNA
Sbjct: 121 RAEIKYRIKQTD------------------------SGNVHGDASIKYRIKQIDSGSGNA 180

Query: 181 SIAIKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYP 240
           SIAIKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYP
Sbjct: 181 SIAIKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYP 240

Query: 241 EDGMSNEEFQEMVEAFIARQQRLRREEEFCGF 273
           EDGMSNEEFQEMVEAFIARQQRLRREEEFCGF
Sbjct: 241 EDGMSNEEFQEMVEAFIARQQRLRREEEFCGF 248

[Close]

BLAST of Carg24155 vs. ExPASy TrEMBL
Match: A0A6J1L691 (uncharacterized protein LOC111499556 OS=Cucurbita maxima OX=3661 GN=LOC111499556 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 3.2e-121
Identity = 241/272 (88.60%), Postives = 243/272 (89.34%), Query Frame = 0


Query: 1   MESVGFCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYF 60
           MESV FCDIRTE+MN ILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKN GEYF
Sbjct: 1   MESVSFCDIRTERMNTILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNFGEYF 60

Query: 61  RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTR 120
           RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTR
Sbjct: 61  RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTR 120

Query: 121 RAEIKYRIKQTDSGSGNVQGDASIDYRIKQIDSGSGSGNVHGDASIKYRIKQIDSGSGNA 180
           RAEIKYRIKQ D                        SGNVHGDASIKYRI+QIDSGSGNA
Sbjct: 121 RAEIKYRIKQID------------------------SGNVHGDASIKYRIQQIDSGSGNA 180

Query: 181 SIAIKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYP 240
           SI IKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYP
Sbjct: 181 SIVIKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYP 240

Query: 241 EDGMSNEEFQEMVEAFIARQQRLRREEEFCGF 273
           EDGMSNEEFQEMVEAFIARQQRLRREEEFCGF
Sbjct: 241 EDGMSNEEFQEMVEAFIARQQRLRREEEFCGF 248

[Close]

BLAST of Carg24155 vs. ExPASy TrEMBL
Match: A0A6J1JGH7 (uncharacterized protein LOC111484294 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484294 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 5.7e-86
Identity = 188/272 (69.12%), Postives = 207/272 (76.10%), Query Frame = 0


Query: 1   MESVGFCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYF 60
           MESV F D+R  KMNAILKYRQ+RKIANLFRFIELCLILVV+++ S +LPSAFKNSGEYF
Sbjct: 1   MESVNFYDVRAAKMNAILKYRQVRKIANLFRFIELCLILVVMTRFSSNLPSAFKNSGEYF 60

Query: 61  RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTR 120
           RCLS+TLISPRFVFLIGNAIVITLFAKSGQFS  D SKKNSVADLYEEF+QNSEKNQ+TR
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNSEKNQKTR 120

Query: 121 RAEIKYRIKQTDSGSGNVQGDASIDYRIKQIDSGSGSGNVHGDASIKYRIKQIDSGSGNA 180
           RAE                    I+YR+KQID   G+GN                G+ + 
Sbjct: 121 RAE--------------------IEYRVKQIDDSRGNGN----------------GNSDT 180

Query: 181 SIAIKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYP 240
           SIAIKKIG   EIKHY+RS+SEKI VVQRENPH +L RSETEK KKIVRLSE T   S P
Sbjct: 181 SIAIKKIG---EIKHYQRSESEKIGVVQRENPHRELRRSETEKYKKIVRLSEETRNRSSP 233

Query: 241 EDGMSNEEFQEMVEAFIARQQRLRREEEFCGF 273
           ED MSNEEF++ VEAFIARQQRLRREEEFC F
Sbjct: 241 EDRMSNEEFRQTVEAFIARQQRLRREEEFCVF 233

[Close]

BLAST of Carg24155 vs. ExPASy TrEMBL
Match: A0A6J1CYN5 (uncharacterized protein LOC111015401 OS=Momordica charantia OX=3673 GN=LOC111015401 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 2.0e-83
Identity = 181/272 (66.54%), Postives = 199/272 (73.16%), Query Frame = 0


Query: 1   MESVGFCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYF 60
           MESV F DIR EK NAILK+RQLRKIANLFRFIELCL+LV+IS+ S HLPSA KNSGEYF
Sbjct: 1   MESVNFYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYF 60

Query: 61  RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTR 120
           RCLS+TLISPRFVFLIGNAIVITLFAKSGQFS  D SKKNSVADLYE+FI+NSEKNQ+TR
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEKNQKTR 120

Query: 121 RAEIKYRIKQTDSGSGNVQGDASIDYRIKQIDSGSGSGNVHGDASIKYRIKQIDSGSGNA 180
            AEI+YR KQ D                                           G G+A
Sbjct: 121 HAEIEYRTKQID-------------------------------------------GDGDA 180

Query: 181 SIAIKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYP 240
           S+A KK+ NPEEIK YRRSQSEKIAV Q+ENP  +L RSETEK KK+VR SEG  + SYP
Sbjct: 181 SVAAKKVVNPEEIKLYRRSQSEKIAVAQQENPQRELRRSETEKCKKLVRFSEGAAKSSYP 229

Query: 241 EDGMSNEEFQEMVEAFIARQQRLRREEEFCGF 273
           ED MSNEEF++ VEAFIARQQRLRREEE C F
Sbjct: 241 EDRMSNEEFRQTVEAFIARQQRLRREEEHCVF 229

[Close]

BLAST of Carg24155 vs. ExPASy TrEMBL
Match: A0A5D3DZ88 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00270 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 2.8e-69
Identity = 165/275 (60.00%), Postives = 185/275 (67.27%), Query Frame = 0


Query: 1   MESVGFCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYF 60
           MESV F DIRTEK NAILKYRQ RKIANLFRFIELCLIL+VIS+ S HLP+A KN  EYF
Sbjct: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNFTEYF 60

Query: 61  RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEK-NQRT 120
           R LS+TLISPRFVFLIGNAIVITLFAKSGQFS  D SKKN VADLYEEFI+NSEK NQ++
Sbjct: 61  RYLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEKNNQKS 120

Query: 121 RRAEIKYRIKQTDSGSGNVQGDASIDYRIKQIDSGSGSGNVHGDASIKYRIKQIDSGSGN 180
            R E                                          I Y+IK ID   G 
Sbjct: 121 PRTE------------------------------------------INYQIKHIDESRGK 180

Query: 181 ASIAIKK-IGNPEEIKHYRRSQSEKIAVVQREN-PHSKLSRSETEKSKKIVRLSEGTEQI 240
           AS++++K + NPEE K Y+R +SEK+ VV RE      L RSETEK KK+V L EG    
Sbjct: 181 ASVSVEKVVNNPEETKRYQRCKSEKMEVVLREKVDRELLQRSETEKCKKMVELKEGRRNS 233

Query: 241 SYPEDGMSNEEFQEMVEAFIARQQRLRREEEFCGF 273
           SYPED MSNEEF++ VEAFIARQQRL+REEEF  F
Sbjct: 241 SYPEDVMSNEEFRQTVEAFIARQQRLQREEEFSEF 233

[Close]

BLAST of Carg24155 vs. TAIR 10
Match: AT4G34560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66440.1); Has 67 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 114.0 bits (284), Expect = 1.9e-25
Identity = 93/272 (34.19%), Postives = 141/272 (51.84%), Query Frame = 0


Query: 1   MESVGFCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYF 60
           M+ + F  ++ EK   IL ++ +R   +LFR  EL L++++ISKLS   PS  K SG+ F
Sbjct: 1   MDPIKFQHLKMEKSRGILNFQAIRSFTSLFRLFELLLLVILISKLS--FPSV-KISGDIF 60

Query: 61  RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVA----DLYEEFIQNSEKN 120
           +  ++ L+SPRFVF IGNAIVITL AKSG++S +    K +      DLY+EF+  SEK 
Sbjct: 61  KEAAVFLVSPRFVFFIGNAIVITLLAKSGRYSSSHEPSKTATEAASNDLYQEFLHKSEKK 120

Query: 121 QRTRRAEIKYRIKQTDSGSGNVQGDASIDYRIKQIDSGSGSGNVHGDASIKYRIKQIDSG 180
           +    A    ++K+   G              K++  G                    S 
Sbjct: 121 KPVVYATKTEQLKKPSGG--------------KRVSFGR-------------------SQ 180

Query: 181 SGNASIAIKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQ 240
           S  A  A+K + +    K+ +R  SEK         H ++  S+    KK+V       +
Sbjct: 181 SHKAFEAVKPLESTNGEKNMKRYVSEK---------HMRVCDSD----KKVV------VR 217

Query: 241 ISYPEDGMSNEEFQEMVEAFIARQQRLRREEE 269
           +  PEDGMSNE+F+  +EAFIARQ+R++++EE
Sbjct: 241 VKKPEDGMSNEQFRTKIEAFIARQKRIQKDEE 217

[Close]

BLAST of Carg24155 vs. TAIR 10
Match: AT5G66440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 93.6 bits (231), Expect = 2.6e-19
Identity = 79/268 (29.48%), Postives = 139/268 (51.87%), Query Frame = 0


Query: 1   MESVGFCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYF 60
           M+S  F +++ EK  A+ ++ +  +I   FR  E+C+ L+ I      LP   + SG + 
Sbjct: 1   MDSFDFDNVKAEKAKALRRFNRFCRIGRFFRAAEVCVALLFIFWTFSQLPFVVQISGAFL 60

Query: 61  RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRTR 120
           R ++  + +P FVFL+GN+IV+ L  KS   + T ++  ++  ++Y+ F+++ E   +  
Sbjct: 61  RRIAAVISTPLFVFLLGNSIVVVLLTKSSDQTTTAVA--SAETEIYQAFVRSVENRSKP- 120

Query: 121 RAEIKYRIKQTDSGSGNVQGDASIDYRIKQIDSGSGSGNVHGDASIKYRIKQIDSGSGNA 180
                      D   G V  D  +   +  +DS   + N+  D ++ +   +IDS S   
Sbjct: 121 --------SDEDLTEGIVYDDKQV--IVTDLDS---NPNLTVDENMPH--VEIDSDSSPH 180

Query: 181 SIAIKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEK-SKKIVRLSEGTEQISY 240
           S   K  G  +     ++S +  + +++R      L RSETEK  K+     +  E+ +Y
Sbjct: 181 S---KVYGRSKSDVSGKQSSNMVMMMMKR-----SLQRSETEKFCKETENDDDSEEEKNY 240

Query: 241 PEDGMSNEEFQEMVEAFIARQQRLRREE 268
           PED +SNEEFQ+ +EAFIA+Q+  RR+E
Sbjct: 241 PEDDLSNEEFQKTIEAFIAKQRMFRRQE 242

[Close]

BLAST of Carg24155 vs. TAIR 10
Match: AT2G21560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39190.1); Has 3685 Blast hits to 2305 proteins in 270 species: Archae - 0; Bacteria - 156; Metazoa - 1145; Fungi - 322; Plants - 177; Viruses - 6; Other Eukaryotes - 1879 (source: NCBI BLink). )

HSP 1 Score: 76.3 bits (186), Expect = 4.4e-14
Identity = 77/282 (27.30%), Postives = 137/282 (48.58%), Query Frame = 0


Query: 1   MESVGFCDIRTEKMNAILKYRQLRKIANLF-RFIELCLILVVISKLSIHLPSAFKNSGEY 60
           M+S+     +  KM  ++K  + + + +LF R IE+ L+++ ++KL   L    ++SG  
Sbjct: 1   MDSLSTQKAKPRKMKVVVKKSRAQVLLDLFYRVIEITLVIITLAKLCYQLVITVESSG-- 60

Query: 61  FRCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEKNQRT 120
              L+  LI+    F++GN IVIT+  K G F+  +   + +  D Y+EF++ S + +R 
Sbjct: 61  ---LASFLINRHLAFVLGNTIVITIVVKCGFFANQETDARRNRNDFYDEFVRESSRGERR 120

Query: 121 RRAEIKYRIKQTDSGSGNVQ------GDASIDYRIKQIDSGSGSGNVHGDASIKYRIKQI 180
              ++  R KQ++  S   Q         SI+ + +     S S N    ++ + R K  
Sbjct: 121 LHTDVICREKQSEVESVAKQSIEENRAKQSIEDKRQSRAKPSMSENRAKQSTEEKREKLK 180

Query: 181 DSG-SGNASIAIKKIGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEK---SKKIVR 240
            S  SG  S      G+  E K     +  +I    +++P     RS +E    SKK   
Sbjct: 181 KSEISGRQS-----SGDESEKKDITVKKQRQIVAQNQDSPMKSYERSRSENHEGSKKSSC 240

Query: 241 LSEGTEQISYPEDG-MSNEEFQEMVEAFIARQQRLRREEEFC 271
           +     +   P D  +S++E +  +E+FIARQ+R +++EEFC
Sbjct: 241 VQLKRSETERPADRIVSDDELRYKIESFIARQRRNQKDEEFC 272

[Close]

BLAST of Carg24155 vs. TAIR 10
Match: AT4G39190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G21560.1); Has 5536 Blast hits to 3562 proteins in 401 species: Archae - 12; Bacteria - 497; Metazoa - 1363; Fungi - 374; Plants - 149; Viruses - 22; Other Eukaryotes - 3119 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 3.8e-10
Identity = 70/266 (26.32%), Postives = 125/266 (46.99%), Query Frame = 0


Query: 30  FRFIELCLILVVISKLSIHLPSAFKNSGEYFRCLSMTLISPRFVFLIGNAIVITLFAKSG 89
           FR IE+ ++LV ++KLS  L   F++S       S+ L +    F+IGNAIVI L AKSG
Sbjct: 32  FRAIEIVVVLVTLAKLSYELVVTFEDSS----VASVILANRSLAFVIGNAIVIALIAKSG 91

Query: 90  QFSGTDLSKKNSVADLYEEFIQNSEKNQRTRRAEIKYRIKQTDS------------GSGN 149
                +   K    DLYE+F+  S +     + E++   KQ+++               N
Sbjct: 92  ILLNQEHDPKCKSNDLYEDFVLESSRRGGFSQDEMRSGEKQSEAENEAKQSITENKAKEN 151

Query: 150 VQGDASIDYRIKQIDSGSGSGNVHGDASIKY--------------RIKQIDSGSGNASIA 209
            +  +  + R+K+  +   +  +  +  +K               R KQ +    + ++ 
Sbjct: 152 EEKQSITESRVKKSVTEKKTKRIISEKKVKQSKPEKLTKQSTSVNREKQSEVEHKDITMT 211

Query: 210 IKK--IGNPEEIKHYRRSQSEKIAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYPE 268
           I+K  +    +I+ Y+RS+SE + V+++ +   +L RSET+ S                E
Sbjct: 212 IEKQNLTEKRQIQSYQRSKSENLKVLEKSS-CGRLKRSETDAS---------------AE 271

The following BLAST results are available for this feature:

BLAST of Carg24155 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035078.1	2.3e-142	100.00	hypothetical protein SDJN02_01873, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6605068.1	6.7e-142	99.63	hypothetical protein SDJN03_02385, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023532809.1	1.7e-140	98.90	uncharacterized protein LOC111794869 [Cucurbita pepo subsp. pepo]	[more]
XP_022948013.1	9.8e-125	91.18	uncharacterized protein LOC111451717 [Cucurbita moschata]	[more]
XP_023006908.1	6.6e-121	88.60	uncharacterized protein LOC111499556 [Cucurbita maxima]	[more]

BLAST of Carg24155 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg24155 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G874	4.7e-125	91.18	uncharacterized protein LOC111451717 OS=Cucurbita moschata OX=3662 GN=LOC1114517...	[more]
A0A6J1L691	3.2e-121	88.60	uncharacterized protein LOC111499556 OS=Cucurbita maxima OX=3661 GN=LOC111499556...	[more]
A0A6J1JGH7	5.7e-86	69.12	uncharacterized protein LOC111484294 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1CYN5	2.0e-83	66.54	uncharacterized protein LOC111015401 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A5D3DZ88	2.8e-69	60.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Carg24155 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G34560.1	1.9e-25	34.19	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G66440.1	2.6e-19	29.48	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G21560.1	4.4e-14	27.30	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G39190.1	3.8e-10	26.32	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 246..266
None	No IPR available	PANTHER	PTHR33640:SF8	TRANSMEMBRANE PROTEIN	coord: 1..269
None	No IPR available	PANTHER	PTHR33640	TRANSMEMBRANE PROTEIN	coord: 1..269

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24155-RA	Carg24155-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane