Carg23996 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23996
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Nuclear transcription factor Y subunit C
Location	Carg_Chr11: 9853090 .. 9853899 (-)
RNA-Seq Expression	Carg23996
Synteny	Carg23996

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCAATCAGAGCGTTCTCAGCATCAGCAACAATCCCAGCAGGCTGCAGGCGGTGTTGGTGCAGGACAATTACCATATTCTAATCCTTACCAAACAGCTCCAATGGGGGCGTCCGGAACGCCTGCTATTACGATTCCCCCGACTCAGCAACCATCCAGTTTCTCCAACTCTCCACACCAGCTTGCCTTTCAGCAGGCTCAGCACTTCCACCAGCAGCAGCAGCAACAACAGCAACAACAGCTCCAAGTGTTCTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCACAGTCTCCCCCTTGCTCGAATCAAGAAAATAATGAAAGCGGATGAAGACGTTCGAATGATTTCAGCTGAAGCGCCAGTTATATTTGCAAAGGCGTGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGATTCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAACGATATTGCAGCTGCAATTTCGAGGACCGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGATGAACTGAAAGAGGAAGGTCTCGGAATCACGAAAGCTTCTATTCCTGTAGTTGGTTCCCCGGCCGATCTTCCTTATTACTATGTTCCATCACAACATCCAGTGAGTGCTACAGGGATGATCATGGGGAAGCAATTAGATCAAGCGAACATGTACGGTGCCACAGCTCAACAGCCCCGACCACCGATACCTTTCATGCCATGGCCGCATACTCAAGCTCAGCAGCAGCAGCAACAACAACAAACTCAGCAGCAAAGTGACGCATAG

mRNA sequence

ATGGATCAATCAGAGCGTTCTCAGCATCAGCAACAATCCCAGCAGGCTGCAGGCGGTGTTGGTGCAGGACAATTACCATATTCTAATCCTTACCAAACAGCTCCAATGGGGGCGTCCGGAACGCCTGCTATTACGATTCCCCCGACTCAGCAACCATCCAGTTTCTCCAACTCTCCACACCAGCTTGCCTTTCAGCAGGCTCAGCACTTCCACCAGCAGCAGCAGCAACAACAGCAACAACAGCTCCAAGTGTTCTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCACAGTCTCCCCCTTGCTCGAATCAAGAAAATAATGAAAGCGGATGAAGACGTTCGAATGATTTCAGCTGAAGCGCCAGTTATATTTGCAAAGGCGTGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGATTCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAACGATATTGCAGCTGCAATTTCGAGGACCGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGATGAACTGAAAGAGGAAGGTCTCGGAATCACGAAAGCTTCTATTCCTGTAGTTGGTTCCCCGGCCGATCTTCCTTATTACTATGTTCCATCACAACATCCAGTGAGTGCTACAGGGATGATCATGGGGAAGCAATTAGATCAAGCGAACATGTACGGTGCCACAGCTCAACAGCCCCGACCACCGATACCTTTCATGCCATGGCCGCATACTCAAGCTCAGCAGCAGCAGCAACAACAACAAACTCAGCAGCAAAGTGACGCATAG

Coding sequence (CDS)

ATGGATCAATCAGAGCGTTCTCAGCATCAGCAACAATCCCAGCAGGCTGCAGGCGGTGTTGGTGCAGGACAATTACCATATTCTAATCCTTACCAAACAGCTCCAATGGGGGCGTCCGGAACGCCTGCTATTACGATTCCCCCGACTCAGCAACCATCCAGTTTCTCCAACTCTCCACACCAGCTTGCCTTTCAGCAGGCTCAGCACTTCCACCAGCAGCAGCAGCAACAACAGCAACAACAGCTCCAAGTGTTCTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCACAGTCTCCCCCTTGCTCGAATCAAGAAAATAATGAAAGCGGATGAAGACGTTCGAATGATTTCAGCTGAAGCGCCAGTTATATTTGCAAAGGCGTGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGATTCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAACGATATTGCAGCTGCAATTTCGAGGACCGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGATGAACTGAAAGAGGAAGGTCTCGGAATCACGAAAGCTTCTATTCCTGTAGTTGGTTCCCCGGCCGATCTTCCTTATTACTATGTTCCATCACAACATCCAGTGAGTGCTACAGGGATGATCATGGGGAAGCAATTAGATCAAGCGAACATGTACGGTGCCACAGCTCAACAGCCCCGACCACCGATACCTTTCATGCCATGGCCGCATACTCAAGCTCAGCAGCAGCAGCAACAACAACAAACTCAGCAGCAAAGTGACGCATAG

Protein sequence

MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPWPHTQAQQQQQQQQTQQQSDA

Homology

[Close]

BLAST of Carg23996 vs. NCBI nr
Match: XP_022927856.1 (nuclear transcription factor Y subunit C-2-like [Cucurbita moschata] >XP_022927857.1 nuclear transcription factor Y subunit C-2-like [Cucurbita moschata] >KAG7022566.1 Nuclear transcription factor Y subunit C-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 510.4 bits (1313), Expect = 9.6e-141
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60
           MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60

Query: 61  QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPPIPFMPWPHTQAQQQQQQQQTQQQSDA 270
           RPPIPFMPWPHTQAQQQQQQQQTQQQSDA
Sbjct: 241 RPPIPFMPWPHTQAQQQQQQQQTQQQSDA 269

[Close]

BLAST of Carg23996 vs. NCBI nr
Match: XP_022988890.1 (nuclear transcription factor Y subunit C-2-like [Cucurbita maxima] >XP_022988891.1 nuclear transcription factor Y subunit C-2-like [Cucurbita maxima])

HSP 1 Score: 509.2 bits (1310), Expect = 2.1e-140
Identity = 268/269 (99.63%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60
           MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60

Query: 61  QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAFQQAQHFHQQQQQQQQQQLQ+FWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAFQQAQHFHQQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPPIPFMPWPHTQAQQQQQQQQTQQQSDA 270
           RPPIPFMPWPHTQAQQQQQQQQTQQQSDA
Sbjct: 241 RPPIPFMPWPHTQAQQQQQQQQTQQQSDA 269

[Close]

BLAST of Carg23996 vs. NCBI nr
Match: XP_023529250.1 (nuclear transcription factor Y subunit C-2-like [Cucurbita pepo subsp. pepo] >XP_023529251.1 nuclear transcription factor Y subunit C-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 502.3 bits (1292), Expect = 2.6e-138
Identity = 267/269 (99.26%), Postives = 267/269 (99.26%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60
           MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60

Query: 61  QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMY ATAQQP
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYSATAQQP 240

Query: 241 RPPIPFMPWPHTQAQQQQQQQQTQQQSDA 270
           RPPIPFMPWPHTQA QQQQQQQTQQQSDA
Sbjct: 241 RPPIPFMPWPHTQA-QQQQQQQTQQQSDA 268

[Close]

BLAST of Carg23996 vs. NCBI nr
Match: XP_004136852.1 (nuclear transcription factor Y subunit C-2 [Cucumis sativus] >XP_008455266.1 PREDICTED: nuclear transcription factor Y subunit C-2 [Cucumis melo] >XP_008455267.1 PREDICTED: nuclear transcription factor Y subunit C-2 [Cucumis melo] >XP_011658757.1 nuclear transcription factor Y subunit C-2 [Cucumis sativus] >XP_016901763.1 PREDICTED: nuclear transcription factor Y subunit C-2 [Cucumis melo] >XP_031744926.1 nuclear transcription factor Y subunit C-2 [Cucumis sativus] >KAA0031528.1 nuclear transcription factor Y subunit C-2 [Cucumis melo var. makuwa] >KGN43662.1 hypothetical protein Csa_017325 [Cucumis sativus] >TYK06981.1 nuclear transcription factor Y subunit C-2 [Cucumis melo var. makuwa])

HSP 1 Score: 475.7 bits (1223), Expect = 2.6e-130
Identity = 253/268 (94.40%), Postives = 257/268 (95.90%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60
           MDQSERSQHQQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLA+QQAQHFH QQQQQQQQQLQ+FWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKAS+PVVGSPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGATAQQP
Sbjct: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPPIPFMPWPHTQAQQQQQQQQTQQQSD 269
           RP +PFMPWPHT   Q QQQQQTQQQSD
Sbjct: 241 RPSMPFMPWPHT---QPQQQQQTQQQSD 265

[Close]

BLAST of Carg23996 vs. NCBI nr
Match: XP_038888434.1 (nuclear transcription factor Y subunit C-2-like [Benincasa hispida] >XP_038888435.1 nuclear transcription factor Y subunit C-2-like [Benincasa hispida] >XP_038888436.1 nuclear transcription factor Y subunit C-2-like [Benincasa hispida] >XP_038888437.1 nuclear transcription factor Y subunit C-2-like [Benincasa hispida])

HSP 1 Score: 473.8 bits (1218), Expect = 1.0e-129
Identity = 252/269 (93.68%), Postives = 255/269 (94.80%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60
           MDQSERSQH QQSQQ AG VGAGQLPYSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPH
Sbjct: 1   MDQSERSQHHQQSQQPAGSVGAGQLPYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLA+QQAQHFH QQQQQQQQQLQ+FWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPV ATGMIMGKQLDQ NMYG TAQQP
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQVNMYGGTAQQP 240

Query: 241 RPPIPFMPWPHTQAQQQQQQQQTQQQSDA 270
           RP +PFMPWPHT   Q QQQQQTQQQSDA
Sbjct: 241 RPSMPFMPWPHT---QPQQQQQTQQQSDA 266

[Close]

BLAST of Carg23996 vs. ExPASy Swiss-Prot
Match: Q8LCG7 (Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana OX=3702 GN=NFYC2 PE=1 SV=2)

HSP 1 Score: 253.4 bits (646), Expect = 2.8e-66
Identity = 148/214 (69.16%), Postives = 159/214 (74.30%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60
           M+QSE  Q QQQ          G + Y                  +PP    S   N+  
Sbjct: 1   MEQSEEGQQQQQQ---------GVMDY------------------VPPHAYQSGPVNAAS 60

Query: 61  QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
            +AFQQA HFH   QQQQQQQLQ+FWANQMQEIE TTDFKNH+LPLARIKKIMKADEDVR
Sbjct: 61  HMAFQQAHHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIP-VVGSPADLPYYYVPSQ 214
           RDELKEEGLG+TK +IP VVGSP   PYYY+  Q
Sbjct: 181 RDELKEEGLGVTKGTIPSVVGSP---PYYYLQQQ 184

[Close]

BLAST of Carg23996 vs. ExPASy Swiss-Prot
Match: Q655V5 (Nuclear transcription factor Y subunit C-4 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYC4 PE=1 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 5.4e-62
Identity = 153/263 (58.17%), Postives = 181/263 (68.82%), Query Frame = 0


Query: 12  QSQQAAGGVGAGQ--LPYSNPYQTAPMGASGTPAITIPPTQQPSSFS--NSPHQLAFQQA 71
           Q Q A G V  G    P   P  T P   +  PA + P    P++    ++ HQL +QQA
Sbjct: 6   QPQPAIGVVAGGSQVYPAYRPAATVPTAPAVIPAGSQPAPSFPANPDQLSAQHQLVYQQA 65

Query: 72  QHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAP 131
           Q FHQQ QQQQQ+QLQ FWA ++ +IEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAP
Sbjct: 66  QQFHQQLQQQQQRQLQQFWAERLVDIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAP 125

Query: 132 VIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEE 191
           VIFAKACE+FILELTLRSW+HTEENKRRTLQKNDIAAAI+RTD++DFLVDI+PRD+LKEE
Sbjct: 126 VIFAKACEIFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDMYDFLVDIVPRDDLKEE 185

Query: 192 GLGITKASIPVVGSPAD-LPY-YYVPSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIP 251
           G+G+ +A +P +G PAD  PY YYVP Q  V   G+  G Q       G   Q P     
Sbjct: 186 GVGLPRAGLPPLGVPADSYPYGYYVPQQQ-VPGAGIAYGGQQGHP---GYLWQDP----- 245

Query: 252 FMPWPHTQAQQQQQQQQTQQQSD 269
                    Q+QQ++   +QQSD
Sbjct: 246 ---------QEQQEEPPAEQQSD 250

[Close]

BLAST of Carg23996 vs. ExPASy Swiss-Prot
Match: Q8L4B2 (Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana OX=3702 GN=NFYC9 PE=1 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.0e-56
Identity = 146/255 (57.25%), Postives = 173/255 (67.84%), Query Frame = 0


Query: 11  QQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHF 70
           QQ    +G +  G    +NPYQT PM    T A T+      +  +  P QLAF Q    
Sbjct: 3   QQDHGQSGAMNYG----TNPYQTNPM---STTAATV------AGGAAQPGQLAFHQ---I 62

Query: 71  HQQQQQQQ-QQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVI 130
           HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+
Sbjct: 63  HQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVV 122

Query: 131 FAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGL 190
           FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E L
Sbjct: 123 FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVL 182

Query: 191 G-ITKASIPVVGSPADLPYYYVPS-QHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFM 250
           G I + ++P   + A  PY Y+P+   P+   GM+MG      N  GA      PP P+M
Sbjct: 183 GSIPRGTVPEAAA-AGYPYGYLPAGTAPIGNPGMVMG------NPGGA-----YPPNPYM 229

Query: 251 PWPHTQAQQQQQQQQ 263
             P  Q Q   Q  Q
Sbjct: 243 GQPMWQQQAPDQPDQ 229

[Close]

BLAST of Carg23996 vs. ExPASy Swiss-Prot
Match: Q9SMP0 (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NFYC1 PE=1 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.7e-53
Identity = 108/165 (65.45%), Postives = 127/165 (76.97%), Query Frame = 0


Query: 76  QQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACE 135
           QQQQQQLQ+FW  Q QEIEQ  DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE
Sbjct: 38  QQQQQQLQLFWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACE 97

Query: 136 MFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS 195
           +FILELT+RSW+H EENKRRTLQKNDIAAAI+RTD+FDFLVDI+PRDE+K+E   +    
Sbjct: 98  LFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEA-AVLGGG 157

Query: 196 IPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 241
           + V  + + +PYYY P   P    GM++G+     N  G   Q P
Sbjct: 158 MVVAPTASGVPYYYPPMGQPAGPGGMMIGRPAMDPN--GVYVQPP 199

[Close]

BLAST of Carg23996 vs. ExPASy Swiss-Prot
Match: Q9ZVL3 (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NFYC3 PE=1 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 5.1e-52
Identity = 140/251 (55.78%), Postives = 161/251 (64.14%), Query Frame = 0


Query: 11  QQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHF 70
           QQ Q +A   G      SNPYQ        T A+T  PT        S H  A+ Q    
Sbjct: 3   QQGQSSAMNYG------SNPYQ--------TNAMTTTPT-------GSDHP-AYHQ---I 62

Query: 71  HQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIF 130
           HQQQQQQ  QQLQ FW  Q +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+F
Sbjct: 63  HQQQQQQLTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVF 122

Query: 131 AKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG 190
           A+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG
Sbjct: 123 ARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLG 182

Query: 191 ITKASIPVVGSPADLPYYYV-PSQHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFMPW 250
              A      + A  PY Y+ P   P+   GM+MG         GA      PP P+M  
Sbjct: 183 GVGAE---AATAAGYPYGYLPPGTAPIGNPGMVMGNP-------GA-----YPPNPYMGQ 213

Query: 251 PHTQAQQQQQQ 261
           P  Q    +QQ
Sbjct: 243 PMWQQPGPEQQ 213

[Close]

BLAST of Carg23996 vs. ExPASy TrEMBL
Match: A0A6J1EIQ0 (nuclear transcription factor Y subunit C-2-like OS=Cucurbita moschata OX=3662 GN=LOC111434626 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 4.7e-141
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60
           MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60

Query: 61  QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPPIPFMPWPHTQAQQQQQQQQTQQQSDA 270
           RPPIPFMPWPHTQAQQQQQQQQTQQQSDA
Sbjct: 241 RPPIPFMPWPHTQAQQQQQQQQTQQQSDA 269

[Close]

BLAST of Carg23996 vs. ExPASy TrEMBL
Match: A0A6J1JII4 (nuclear transcription factor Y subunit C-2-like OS=Cucurbita maxima OX=3661 GN=LOC111486109 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.0e-140
Identity = 268/269 (99.63%), Postives = 269/269 (100.00%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60
           MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60

Query: 61  QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLAFQQAQHFHQQQQQQQQQQLQ+FWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAFQQAQHFHQQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP
Sbjct: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPPIPFMPWPHTQAQQQQQQQQTQQQSDA 270
           RPPIPFMPWPHTQAQQQQQQQQTQQQSDA
Sbjct: 241 RPPIPFMPWPHTQAQQQQQQQQTQQQSDA 269

[Close]

BLAST of Carg23996 vs. ExPASy TrEMBL
Match: A0A1S3C190 (nuclear transcription factor Y subunit C-2 OS=Cucumis melo OX=3656 GN=LOC103495470 PE=4 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 1.3e-130
Identity = 253/268 (94.40%), Postives = 257/268 (95.90%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60
           MDQSERSQHQQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLA+QQAQHFH QQQQQQQQQLQ+FWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKAS+PVVGSPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGATAQQP
Sbjct: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPPIPFMPWPHTQAQQQQQQQQTQQQSD 269
           RP +PFMPWPHT   Q QQQQQTQQQSD
Sbjct: 241 RPSMPFMPWPHT---QPQQQQQTQQQSD 265

[Close]

BLAST of Carg23996 vs. ExPASy TrEMBL
Match: A0A5A7SLP2 (Nuclear transcription factor Y subunit C-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002960 PE=4 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 1.3e-130
Identity = 253/268 (94.40%), Postives = 257/268 (95.90%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60
           MDQSERSQHQQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLA+QQAQHFH QQQQQQQQQLQ+FWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKAS+PVVGSPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGATAQQP
Sbjct: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPPIPFMPWPHTQAQQQQQQQQTQQQSD 269
           RP +PFMPWPHT   Q QQQQQTQQQSD
Sbjct: 241 RPSMPFMPWPHT---QPQQQQQTQQQSD 265

[Close]

BLAST of Carg23996 vs. ExPASy TrEMBL
Match: A0A0A0K5U1 (Histone domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G051420 PE=4 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 1.3e-130
Identity = 253/268 (94.40%), Postives = 257/268 (95.90%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60
           MDQSERSQHQQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPH
Sbjct: 1   MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPH 60

Query: 61  QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
           QLA+QQAQHFH QQQQQQQQQLQ+FWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  QLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVSATGMIMGKQLDQANMYGATAQQP 240
           RDELKEEGLGITKAS+PVVGSPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGATAQQP
Sbjct: 181 RDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP 240

Query: 241 RPPIPFMPWPHTQAQQQQQQQQTQQQSD 269
           RP +PFMPWPHT   Q QQQQQTQQQSD
Sbjct: 241 RPSMPFMPWPHT---QPQQQQQTQQQSD 265

[Close]

BLAST of Carg23996 vs. TAIR 10
Match: AT1G56170.1 (nuclear factor Y, subunit C2 )

HSP 1 Score: 253.4 bits (646), Expect = 2.0e-67
Identity = 148/214 (69.16%), Postives = 159/214 (74.30%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60
           M+QSE  Q QQQ          G + Y                  +PP    S   N+  
Sbjct: 1   MEQSEEGQQQQQQ---------GVMDY------------------VPPHAYQSGPVNAAS 60

Query: 61  QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
            +AFQQA HFH   QQQQQQQLQ+FWANQMQEIE TTDFKNH+LPLARIKKIMKADEDVR
Sbjct: 61  HMAFQQAHHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIP-VVGSPADLPYYYVPSQ 214
           RDELKEEGLG+TK +IP VVGSP   PYYY+  Q
Sbjct: 181 RDELKEEGLGVTKGTIPSVVGSP---PYYYLQQQ 184

[Close]

BLAST of Carg23996 vs. TAIR 10
Match: AT1G56170.2 (nuclear factor Y, subunit C2 )

HSP 1 Score: 253.4 bits (646), Expect = 2.0e-67
Identity = 148/214 (69.16%), Postives = 159/214 (74.30%), Query Frame = 0


Query: 1   MDQSERSQHQQQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPH 60
           M+QSE  Q QQQ          G + Y                  +PP    S   N+  
Sbjct: 1   MEQSEEGQQQQQQ---------GVMDY------------------VPPHAYQSGPVNAAS 60

Query: 61  QLAFQQAQHFHQQQQQQQQQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVR 120
            +AFQQA HFH   QQQQQQQLQ+FWANQMQEIE TTDFKNH+LPLARIKKIMKADEDVR
Sbjct: 61  HMAFQQAHHFHHHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVR 120

Query: 121 MISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180
           MISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP
Sbjct: 121 MISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIP 180

Query: 181 RDELKEEGLGITKASIP-VVGSPADLPYYYVPSQ 214
           RDELKEEGLG+TK +IP VVGSP   PYYY+  Q
Sbjct: 181 RDELKEEGLGVTKGTIPSVVGSP---PYYYLQQQ 184

[Close]

BLAST of Carg23996 vs. TAIR 10
Match: AT1G08970.4 (nuclear factor Y, subunit C9 )

HSP 1 Score: 220.7 bits (561), Expect = 1.4e-57
Identity = 146/255 (57.25%), Postives = 173/255 (67.84%), Query Frame = 0


Query: 11  QQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHF 70
           QQ    +G +  G    +NPYQT PM    T A T+      +  +  P QLAF Q    
Sbjct: 3   QQDHGQSGAMNYG----TNPYQTNPM---STTAATV------AGGAAQPGQLAFHQ---I 62

Query: 71  HQQQQQQQ-QQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVI 130
           HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+
Sbjct: 63  HQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVV 122

Query: 131 FAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGL 190
           FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E L
Sbjct: 123 FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVL 182

Query: 191 G-ITKASIPVVGSPADLPYYYVPS-QHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFM 250
           G I + ++P   + A  PY Y+P+   P+   GM+MG      N  GA      PP P+M
Sbjct: 183 GSIPRGTVPEAAA-AGYPYGYLPAGTAPIGNPGMVMG------NPGGA-----YPPNPYM 229

Query: 251 PWPHTQAQQQQQQQQ 263
             P  Q Q   Q  Q
Sbjct: 243 GQPMWQQQAPDQPDQ 229

[Close]

BLAST of Carg23996 vs. TAIR 10
Match: AT1G08970.1 (nuclear factor Y, subunit C9 )

HSP 1 Score: 220.7 bits (561), Expect = 1.4e-57
Identity = 146/255 (57.25%), Postives = 173/255 (67.84%), Query Frame = 0


Query: 11  QQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHF 70
           QQ    +G +  G    +NPYQT PM    T A T+      +  +  P QLAF Q    
Sbjct: 3   QQDHGQSGAMNYG----TNPYQTNPM---STTAATV------AGGAAQPGQLAFHQ---I 62

Query: 71  HQQQQQQQ-QQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVI 130
           HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+
Sbjct: 63  HQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVV 122

Query: 131 FAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGL 190
           FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E L
Sbjct: 123 FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVL 182

Query: 191 G-ITKASIPVVGSPADLPYYYVPS-QHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFM 250
           G I + ++P   + A  PY Y+P+   P+   GM+MG      N  GA      PP P+M
Sbjct: 183 GSIPRGTVPEAAA-AGYPYGYLPAGTAPIGNPGMVMG------NPGGA-----YPPNPYM 229

Query: 251 PWPHTQAQQQQQQQQ 263
             P  Q Q   Q  Q
Sbjct: 243 GQPMWQQQAPDQPDQ 229

[Close]

BLAST of Carg23996 vs. TAIR 10
Match: AT1G08970.3 (nuclear factor Y, subunit C9 )

HSP 1 Score: 220.7 bits (561), Expect = 1.4e-57
Identity = 146/255 (57.25%), Postives = 173/255 (67.84%), Query Frame = 0


Query: 11  QQSQQAAGGVGAGQLPYSNPYQTAPMGASGTPAITIPPTQQPSSFSNSPHQLAFQQAQHF 70
           QQ    +G +  G    +NPYQT PM    T A T+      +  +  P QLAF Q    
Sbjct: 3   QQDHGQSGAMNYG----TNPYQTNPM---STTAATV------AGGAAQPGQLAFHQ---I 62

Query: 71  HQQQQQQQ-QQQLQVFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVI 130
           HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+
Sbjct: 63  HQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVV 122

Query: 131 FAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGL 190
           FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E L
Sbjct: 123 FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVL 182

Query: 191 G-ITKASIPVVGSPADLPYYYVPS-QHPVSATGMIMGKQLDQANMYGATAQQPRPPIPFM 250
           G I + ++P   + A  PY Y+P+   P+   GM+MG      N  GA      PP P+M
Sbjct: 183 GSIPRGTVPEAAA-AGYPYGYLPAGTAPIGNPGMVMG------NPGGA-----YPPNPYM 229

Query: 251 PWPHTQAQQQQQQQQ 263
             P  Q Q   Q  Q
Sbjct: 243 GQPMWQQQAPDQPDQ 229

The following BLAST results are available for this feature:

BLAST of Carg23996 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927856.1	9.6e-141	100.00	nuclear transcription factor Y subunit C-2-like [Cucurbita moschata] >XP_0229278...	[more]
XP_022988890.1	2.1e-140	99.63	nuclear transcription factor Y subunit C-2-like [Cucurbita maxima] >XP_022988891...	[more]
XP_023529250.1	2.6e-138	99.26	nuclear transcription factor Y subunit C-2-like [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_004136852.1	2.6e-130	94.40	nuclear transcription factor Y subunit C-2 [Cucumis sativus] >XP_008455266.1 PRE...	[more]
XP_038888434.1	1.0e-129	93.68	nuclear transcription factor Y subunit C-2-like [Benincasa hispida] >XP_03888843...	[more]

BLAST of Carg23996 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LCG7	2.8e-66	69.16	Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q655V5	5.4e-62	58.17	Nuclear transcription factor Y subunit C-4 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q8L4B2	2.0e-56	57.25	Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9SMP0	2.7e-53	65.45	Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9ZVL3	5.1e-52	55.78	Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Carg23996 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EIQ0	4.7e-141	100.00	nuclear transcription factor Y subunit C-2-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JII4	1.0e-140	99.63	nuclear transcription factor Y subunit C-2-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3C190	1.3e-130	94.40	nuclear transcription factor Y subunit C-2 OS=Cucumis melo OX=3656 GN=LOC1034954...	[more]
A0A5A7SLP2	1.3e-130	94.40	Nuclear transcription factor Y subunit C-2 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0K5U1	1.3e-130	94.40	Histone domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G051420 PE=...	[more]

BLAST of Carg23996 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G56170.1	2.0e-67	69.16	nuclear factor Y, subunit C2	[more]
AT1G56170.2	2.0e-67	69.16	nuclear factor Y, subunit C2	[more]
AT1G08970.4	1.4e-57	57.25	nuclear factor Y, subunit C9	[more]
AT1G08970.1	1.4e-57	57.25	nuclear factor Y, subunit C9	[more]
AT1G08970.3	1.4e-57	57.25	nuclear factor Y, subunit C9	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 57..166 e-value: 9.8E-18 score: 64.8
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 64..181 e-value: 4.3E-48 score: 164.4
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 67..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..269
None	No IPR available	PANTHER	PTHR10252:SF117	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9	coord: 9..258
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 9..258

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23996-RA	Carg23996-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity