Carg23982 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23982
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Non-specific lipid-transfer protein-like protein
Location	Carg_Chr11: 9711940 .. 9712700 (+)
RNA-Seq Expression	Carg23982
Synteny	Carg23982

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACCGCCAAGCTTTCTATCTCTCTTTTCGCTCTTTTCGCTCTGGTCGTGAATTACTCCACCGTATACGCCGCCCTTGTGCCGGAGGGGGACTGTTCCAAACTCATCCTCACTTTGGCCGACTGTCTCCCCTTCGTCTCCAAAGACAGCACCACCACCACTCCCGCTAAAGCCTGCTGTCTCGGCCTTAAAATCGTCGCCAAGGCTAACGCCGATTGCCTCTGCCATACCTTCAAGAACAGCGCTTCTTTAGGTATCGTCCTCAATGTCACCAAGGCTCTTTCTCTCCCTGCCGCTTGCGACATATCCGATCCTGCTCTTTCTGAGTGTAAATGTAAGCCTAATTTCTTCAGAATCGCTCTCTTAATTTCCGATTCGGTAAAACCCTAGAAAACCTAACTGATCTGTTTTTGTGAAATCGCTGTTTCCTTTTGATTTCCAGTGTCGACTTCTCCTATTGGCTCTCCTGGTACTGTTTCTTCTCTGAAACGATTTTCGATTAGTCTTACTCTGTTGATTTCGATCTGGATTTTGGAATGTTTGTGATAAAATTCCTGAGCGATTGTTCTGTTTCGATTGTTGTTTTTGATGCAGCGGTTACGCCGGCTGCCTCACCGAAATTGTCGCCGGGAGAAGCGCCAGTGAAGAACGAGACGACGCCGGCTCCGACACCTGAAAATTCGGCGGCGACAGGCGTTGTGGTGTCCGTCGGATCCATAATCGCCGCCATTGGAGTAGGTGTGTTCTACAGTTTTTGA

mRNA sequence

ATGGCTACCGCCAAGCTTTCTATCTCTCTTTTCGCTCTTTTCGCTCTGGTCGTGAATTACTCCACCGTATACGCCGCCCTTGTGCCGGAGGGGGACTGTTCCAAACTCATCCTCACTTTGGCCGACTGTCTCCCCTTCGTCTCCAAAGACAGCACCACCACCACTCCCGCTAAAGCCTGCTGTCTCGGCCTTAAAATCGTCGCCAAGGCTAACGCCGATTGCCTCTGCCATACCTTCAAGAACAGCGCTTCTTTAGGTATCGTCCTCAATGTCACCAAGGCTCTTTCTCTCCCTGCCGCTTGCGACATATCCGATCCTGCTCTTTCTGAGTGTAAATGTAAGCCTAATTTCTTCAGAATCGCTCTCTTAATTTCCGATTCGTCTTACTCTGTTGATTTCGATCTGGATTTTGGAATGTTTGTGATAAAATTCCTGAGCGATTGTTCTGTTTCGATTGTTGTTTTTGATGCAGCGGTTACGCCGGCTGCCTCACCGAAATTGTCGCCGGGAGAAGCGCCAGTGAAGAACGAGACGACGCCGGCTCCGACACCTGAAAATTCGGCGGCGACAGGCGTTGTGGTGTCCGTCGGATCCATAATCGCCGCCATTGGAGTAGGTGTGTTCTACAGTTTTTGA

Coding sequence (CDS)

ATGGCTACCGCCAAGCTTTCTATCTCTCTTTTCGCTCTTTTCGCTCTGGTCGTGAATTACTCCACCGTATACGCCGCCCTTGTGCCGGAGGGGGACTGTTCCAAACTCATCCTCACTTTGGCCGACTGTCTCCCCTTCGTCTCCAAAGACAGCACCACCACCACTCCCGCTAAAGCCTGCTGTCTCGGCCTTAAAATCGTCGCCAAGGCTAACGCCGATTGCCTCTGCCATACCTTCAAGAACAGCGCTTCTTTAGGTATCGTCCTCAATGTCACCAAGGCTCTTTCTCTCCCTGCCGCTTGCGACATATCCGATCCTGCTCTTTCTGAGTGTAAATGTAAGCCTAATTTCTTCAGAATCGCTCTCTTAATTTCCGATTCGTCTTACTCTGTTGATTTCGATCTGGATTTTGGAATGTTTGTGATAAAATTCCTGAGCGATTGTTCTGTTTCGATTGTTGTTTTTGATGCAGCGGTTACGCCGGCTGCCTCACCGAAATTGTCGCCGGGAGAAGCGCCAGTGAAGAACGAGACGACGCCGGCTCCGACACCTGAAAATTCGGCGGCGACAGGCGTTGTGGTGTCCGTCGGATCCATAATCGCCGCCATTGGAGTAGGTGTGTTCTACAGTTTTTGA

Protein sequence

MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKACCLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECKCKPNFFRIALLISDSSYSVDFDLDFGMFVIKFLSDCSVSIVVFDAAVTPAASPKLSPGEAPVKNETTPAPTPENSAATGVVVSVGSIIAAIGVGVFYSF

Homology

[Close]

BLAST of Carg23982 vs. NCBI nr
Match: KAG7022552.1 (Non-specific lipid-transfer protein-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 398.3 bits (1022), Expect = 4.2e-107
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60
           MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECKCKPNFFRI 120
           CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECKCKPNFFRI
Sbjct: 61  CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECKCKPNFFRI 120

Query: 121 ALLISDSSYSVDFDLDFGMFVIKFLSDCSVSIVVFDAAVTPAASPKLSPGEAPVKNETTP 180
           ALLISDSSYSVDFDLDFGMFVIKFLSDCSVSIVVFDAAVTPAASPKLSPGEAPVKNETTP
Sbjct: 121 ALLISDSSYSVDFDLDFGMFVIKFLSDCSVSIVVFDAAVTPAASPKLSPGEAPVKNETTP 180

Query: 181 APTPENSAATGVVVSVGSIIAAIGVGVFYSF 212
           APTPENSAATGVVVSVGSIIAAIGVGVFYSF
Sbjct: 181 APTPENSAATGVVVSVGSIIAAIGVGVFYSF 211

[Close]

BLAST of Carg23982 vs. NCBI nr
Match: XP_022927861.1 (non-specific lipid-transfer protein-like protein At5g64080 isoform X1 [Cucurbita moschata] >KAG6588780.1 Non-specific lipid-transfer protein-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 291.6 bits (745), Expect = 5.5e-75
Identity = 166/211 (78.67%), Postives = 168/211 (79.62%), Query Frame = 0


Query: 1   MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60
           MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECKCKPNFFRI 120
           CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECK   +    
Sbjct: 61  CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECKLSTS---- 120

Query: 121 ALLISDSSYSVDFDLDFGMFVIKFLSDCSVSIVVFDAAVTPAASPKLSPGEAPVKNETTP 180
                                            +   AVTPAASPKLSPGEAPVKNETTP
Sbjct: 121 --------------------------------PIGSPAVTPAASPKLSPGEAPVKNETTP 175

Query: 181 APTPENSAATGVVVSVGSIIAAIGVGVFYSF 212
           APTPENSAATGVVVSVGSIIAAIGVGVFYSF
Sbjct: 181 APTPENSAATGVVVSVGSIIAAIGVGVFYSF 175

[Close]

BLAST of Carg23982 vs. NCBI nr
Match: XP_022927863.1 (non-specific lipid-transfer protein-like protein At5g64080 isoform X2 [Cucurbita moschata])

HSP 1 Score: 290.4 bits (742), Expect = 1.2e-74
Identity = 166/211 (78.67%), Postives = 168/211 (79.62%), Query Frame = 0


Query: 1   MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60
           MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECKCKPNFFRI 120
           CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECK        
Sbjct: 61  CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECK-------- 120

Query: 121 ALLISDSSYSVDFDLDFGMFVIKFLSDCSVSIVVFDAAVTPAASPKLSPGEAPVKNETTP 180
                                        +S     + VTPAASPKLSPGEAPVKNETTP
Sbjct: 121 -----------------------------LSTSPIGSPVTPAASPKLSPGEAPVKNETTP 174

Query: 181 APTPENSAATGVVVSVGSIIAAIGVGVFYSF 212
           APTPENSAATGVVVSVGSIIAAIGVGVFYSF
Sbjct: 181 APTPENSAATGVVVSVGSIIAAIGVGVFYSF 174

[Close]

BLAST of Carg23982 vs. NCBI nr
Match: XP_022988971.1 (non-specific lipid-transfer protein-like protein At5g64080 isoform X1 [Cucurbita maxima])

HSP 1 Score: 278.5 bits (711), Expect = 4.8e-71
Identity = 157/211 (74.41%), Postives = 164/211 (77.73%), Query Frame = 0


Query: 1   MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60
           MATAKLSISLFALF+LVVNYST Y ALVPE DCSKLI+TLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECKCKPNFFRI 120
           C+GLKIVAKANADCLCHTFKNSAS GIVLNVTKALSLPAACDISDPALS+CK   +    
Sbjct: 61  CVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTS---- 120

Query: 121 ALLISDSSYSVDFDLDFGMFVIKFLSDCSVSIVVFDAAVTPAASPKLSPGEAPVKNETTP 180
                                            +   AVTPAASPKLSPGEAPVKNETTP
Sbjct: 121 --------------------------------PIGSPAVTPAASPKLSPGEAPVKNETTP 175

Query: 181 APTPENSAATGVVVSVGSIIAAIGVGVFYSF 212
           APTPENSAATGV+VSVGSIIAAIGVGVFYSF
Sbjct: 181 APTPENSAATGVMVSVGSIIAAIGVGVFYSF 175

[Close]

BLAST of Carg23982 vs. NCBI nr
Match: XP_022988972.1 (non-specific lipid-transfer protein-like protein At5g64080 isoform X2 [Cucurbita maxima])

HSP 1 Score: 277.3 bits (708), Expect = 1.1e-70
Identity = 157/211 (74.41%), Postives = 164/211 (77.73%), Query Frame = 0


Query: 1   MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60
           MATAKLSISLFALF+LVVNYST Y ALVPE DCSKLI+TLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECKCKPNFFRI 120
           C+GLKIVAKANADCLCHTFKNSAS GIVLNVTKALSLPAACDISDPALS+CK        
Sbjct: 61  CVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCK-------- 120

Query: 121 ALLISDSSYSVDFDLDFGMFVIKFLSDCSVSIVVFDAAVTPAASPKLSPGEAPVKNETTP 180
                                        +S     + VTPAASPKLSPGEAPVKNETTP
Sbjct: 121 -----------------------------LSTSPIGSPVTPAASPKLSPGEAPVKNETTP 174

Query: 181 APTPENSAATGVVVSVGSIIAAIGVGVFYSF 212
           APTPENSAATGV+VSVGSIIAAIGVGVFYSF
Sbjct: 181 APTPENSAATGVMVSVGSIIAAIGVGVFYSF 174

[Close]

BLAST of Carg23982 vs. ExPASy Swiss-Prot
Match: Q8VYI9 (Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3702 GN=LTPG31 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 8.4e-18
Identity = 67/209 (32.06%), Postives = 99/209 (47.37%), Query Frame = 0


Query: 6   LSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKACCLGLK 65
           LS+S  ++     +++T   A  P  DCS LIL +ADCL FVS   T   P   CC GLK
Sbjct: 19  LSLSSVSVLGASHHHAT---APAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLK 78

Query: 66  IVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECKCKPNFFRIALLIS 125
            V KA++ CLC  FK+SASLG+ LN+TKA +LPAAC +  P+++ C              
Sbjct: 79  TVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATC-------------- 138

Query: 126 DSSYSVDFDLDFGMFVIKFLSDCSVSIVVFDAAVTPAASPKLSPGEAPVKNET----TPA 185
                                           +V P+ +P L+PG A    ET     P 
Sbjct: 139 ------------------------------GLSVAPSTAPGLAPGVAAAGPETAGFLAPN 180

Query: 186 PTPENSAATGVVVSVGSIIAAIGVGVFYS 211
           P+  N  ++ +  S  ++++A+   +F+S
Sbjct: 199 PSSGNDGSSLIPTSFTTVLSAVLFVLFFS 180

[Close]

BLAST of Carg23982 vs. ExPASy Swiss-Prot
Match: Q9ZQI8 (Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3702 GN=LTPG11 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.5e-14
Identity = 57/181 (31.49%), Postives = 78/181 (43.09%), Query Frame = 0


Query: 32  DCSKLILTLADCLPFVSKDSTTTTPAKACCLGLKIVAKANADCLCHTFKNSASLGIVLNV 91
           DCS LIL +ADCL FV+  ST   P   CC GLK V +   +CLC  FKNS SLG+ L++
Sbjct: 26  DCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTLDL 85

Query: 92  TKALSLPAACDISDPALSECKCKPNFFRIALLISDSSYSVDFDLDFGMFVIKFLSDCSVS 151
           +KA SLP+ C ++ P  +                                      C +S
Sbjct: 86  SKAASLPSVCKVAAPPSAR-------------------------------------CGLS 145

Query: 152 IVVFDAAVTPAASPKLSPGEAPVK---NETTPAPTPENSAATGVVVSVGSIIAAIGVGVF 210
           +     A  P  SP    G   +    N  TP  +P +S A+ + VS   +I    +  F
Sbjct: 146 VSGDPPATAPGLSPTAGAGAPALSSGANAATPVSSPRSSDASLLSVSFAFVIFMALISSF 169

[Close]

BLAST of Carg23982 vs. ExPASy Swiss-Prot
Match: Q9FY78 (Non-specific lipid transfer protein GPI-anchored 29 OS=Arabidopsis thaliana OX=3702 GN=LTPG29 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.2e-13
Identity = 43/104 (41.35%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 12  ALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKACCLGLKIVAKAN 71
           +L  LV++ S+ Y  +    DC  L++TL  CLPF+S   T  TP  +CC  LK +    
Sbjct: 9   SLLLLVLSVSSPY--VHGASDCDTLVITLFPCLPFISIGGTADTPTASCCSSLKNILDTK 68

Query: 72  ADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECKCKP 116
             CLC   K  A LGI LNVTK+ +LP AC ++ P +S C   P
Sbjct: 69  PICLCEGLK-KAPLGIKLNVTKSATLPVACKLNAPPVSACDSLP 109

[Close]

BLAST of Carg23982 vs. ExPASy Swiss-Prot
Match: Q2PE60 (Non-specific lipid transfer protein GPI-anchored 23 OS=Arabidopsis thaliana OX=3702 GN=LTPG23 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.5e-11
Identity = 35/86 (40.70%), Postives = 51/86 (59.30%), Query Frame = 0


Query: 32  DCSKLILTLADCLPFVSKDSTTTTPAKACCLGLKIVAKANADCLCHTFKNSASLGIVLNV 91
           DCS +I ++ DCL F++  ST  +P K CC+G+K V   +  CLC   ++S  +G VL+ 
Sbjct: 44  DCSSVIYSMVDCLSFLTVGSTDPSPTKTCCVGVKTVLNYSPKCLCSALESSREMGFVLDD 103

Query: 92  TKALSLPAA--------CDISDPALS 110
           TKAL++P          CD+S PA S
Sbjct: 104 TKALAMPKICNVPIDPNCDVSTPAAS 129

[Close]

BLAST of Carg23982 vs. ExPASy Swiss-Prot
Match: Q2PE70 (Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=3702 GN=LTPG4 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.4e-10
Identity = 29/73 (39.73%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 32  DCSKLILTLADCLPFVSKDSTTTTPAKACCLGLKIVAKANADCLCHTFKNSASLGIVLNV 91
           DCS +I ++ DCL ++   S  T P K+CC G++ V + N  C+C    ++  +GI LN 
Sbjct: 47  DCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCICAGLVSAGEMGIELNS 106

Query: 92  TKALSLPAACDIS 105
           T+AL+ P AC +S
Sbjct: 107 TRALATPKACKLS 119

[Close]

BLAST of Carg23982 vs. ExPASy TrEMBL
Match: A0A6J1EIQ5 (non-specific lipid-transfer protein-like protein At5g64080 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434631 PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.7e-75
Identity = 166/211 (78.67%), Postives = 168/211 (79.62%), Query Frame = 0


Query: 1   MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60
           MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECKCKPNFFRI 120
           CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECK   +    
Sbjct: 61  CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECKLSTS---- 120

Query: 121 ALLISDSSYSVDFDLDFGMFVIKFLSDCSVSIVVFDAAVTPAASPKLSPGEAPVKNETTP 180
                                            +   AVTPAASPKLSPGEAPVKNETTP
Sbjct: 121 --------------------------------PIGSPAVTPAASPKLSPGEAPVKNETTP 175

Query: 181 APTPENSAATGVVVSVGSIIAAIGVGVFYSF 212
           APTPENSAATGVVVSVGSIIAAIGVGVFYSF
Sbjct: 181 APTPENSAATGVVVSVGSIIAAIGVGVFYSF 175

[Close]

BLAST of Carg23982 vs. ExPASy TrEMBL
Match: A0A6J1EM83 (non-specific lipid-transfer protein-like protein At5g64080 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434631 PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 5.9e-75
Identity = 166/211 (78.67%), Postives = 168/211 (79.62%), Query Frame = 0


Query: 1   MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60
           MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECKCKPNFFRI 120
           CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECK        
Sbjct: 61  CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECK-------- 120

Query: 121 ALLISDSSYSVDFDLDFGMFVIKFLSDCSVSIVVFDAAVTPAASPKLSPGEAPVKNETTP 180
                                        +S     + VTPAASPKLSPGEAPVKNETTP
Sbjct: 121 -----------------------------LSTSPIGSPVTPAASPKLSPGEAPVKNETTP 174

Query: 181 APTPENSAATGVVVSVGSIIAAIGVGVFYSF 212
           APTPENSAATGVVVSVGSIIAAIGVGVFYSF
Sbjct: 181 APTPENSAATGVVVSVGSIIAAIGVGVFYSF 174

[Close]

BLAST of Carg23982 vs. ExPASy TrEMBL
Match: A0A6J1JIP6 (non-specific lipid-transfer protein-like protein At5g64080 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486172 PE=3 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.3e-71
Identity = 157/211 (74.41%), Postives = 164/211 (77.73%), Query Frame = 0


Query: 1   MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60
           MATAKLSISLFALF+LVVNYST Y ALVPE DCSKLI+TLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECKCKPNFFRI 120
           C+GLKIVAKANADCLCHTFKNSAS GIVLNVTKALSLPAACDISDPALS+CK   +    
Sbjct: 61  CVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCKLSTS---- 120

Query: 121 ALLISDSSYSVDFDLDFGMFVIKFLSDCSVSIVVFDAAVTPAASPKLSPGEAPVKNETTP 180
                                            +   AVTPAASPKLSPGEAPVKNETTP
Sbjct: 121 --------------------------------PIGSPAVTPAASPKLSPGEAPVKNETTP 175

Query: 181 APTPENSAATGVVVSVGSIIAAIGVGVFYSF 212
           APTPENSAATGV+VSVGSIIAAIGVGVFYSF
Sbjct: 181 APTPENSAATGVMVSVGSIIAAIGVGVFYSF 175

[Close]

BLAST of Carg23982 vs. ExPASy TrEMBL
Match: A0A6J1JEH5 (non-specific lipid-transfer protein-like protein At5g64080 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486172 PE=3 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 5.2e-71
Identity = 157/211 (74.41%), Postives = 164/211 (77.73%), Query Frame = 0


Query: 1   MATAKLSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKAC 60
           MATAKLSISLFALF+LVVNYST Y ALVPE DCSKLI+TLADCLPFVSKDSTTTTPAKAC
Sbjct: 1   MATAKLSISLFALFSLVVNYSTAYGALVPERDCSKLIITLADCLPFVSKDSTTTTPAKAC 60

Query: 61  CLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECKCKPNFFRI 120
           C+GLKIVAKANADCLCHTFKNSAS GIVLNVTKALSLPAACDISDPALS+CK        
Sbjct: 61  CVGLKIVAKANADCLCHTFKNSASFGIVLNVTKALSLPAACDISDPALSDCK-------- 120

Query: 121 ALLISDSSYSVDFDLDFGMFVIKFLSDCSVSIVVFDAAVTPAASPKLSPGEAPVKNETTP 180
                                        +S     + VTPAASPKLSPGEAPVKNETTP
Sbjct: 121 -----------------------------LSTSPIGSPVTPAASPKLSPGEAPVKNETTP 174

Query: 181 APTPENSAATGVVVSVGSIIAAIGVGVFYSF 212
           APTPENSAATGV+VSVGSIIAAIGVGVFYSF
Sbjct: 181 APTPENSAATGVMVSVGSIIAAIGVGVFYSF 174

[Close]

BLAST of Carg23982 vs. ExPASy TrEMBL
Match: A0A6J1HSQ0 (non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita maxima OX=3661 GN=LOC111467072 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 3.2e-36
Identity = 107/214 (50.00%), Postives = 123/214 (57.48%), Query Frame = 0


Query: 1   MATAKLSISLFALFALVVNYSTVYA---ALVPEGDCSKLILTLADCLPFVSKDSTTTTPA 60
           MATAKL ++LFAL  L ++ S V A   A  P  DCS LIL +ADCL FVS DSTTT P 
Sbjct: 1   MATAKLFLALFALAVLSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60

Query: 61  KACCLGLKIVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECKCKPNF 120
            +CC GLK V KA+ADCLC  FKNSA LG+VLNVTKALSLPAAC +S PA S CK     
Sbjct: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCK----- 120

Query: 121 FRIALLISDSSYSVDFDLDFGMFVIKFLSDCSVSIVVFDAAVTPAASPKLSPGEAPVKNE 180
                 +S+S                              A+ PA SPK     AP  NE
Sbjct: 121 ------LSNSPAG-------------------------PPAIAPANSPKSEAAIAPAVNE 178

Query: 181 TTPAPTPENSAATGVVVSVGSIIAAIGVGVFYSF 212
            T AP P  SAATG +VS+GS+I AIGV +  SF
Sbjct: 181 PTAAPGPGKSAATGAMVSIGSVIGAIGVTLLRSF 178

[Close]

BLAST of Carg23982 vs. TAIR 10
Match: AT5G64080.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 97.4 bits (241), Expect = 1.4e-20
Identity = 51/106 (48.11%), Postives = 68/106 (64.15%), Query Frame = 0


Query: 6   LSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKACCLGLK 65
           LS+S  ++     +++T   A  P  DCS LIL +ADCL FVS   T   P   CC GLK
Sbjct: 19  LSLSSVSVLGASHHHAT---APAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLK 78

Query: 66  IVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSEC 112
            V KA++ CLC  FK+SASLG+ LN+TKA +LPAAC +  P+++ C
Sbjct: 79  TVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATC 121

[Close]

BLAST of Carg23982 vs. TAIR 10
Match: AT5G64080.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 92.0 bits (227), Expect = 6.0e-19
Identity = 67/209 (32.06%), Postives = 99/209 (47.37%), Query Frame = 0


Query: 6   LSISLFALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKACCLGLK 65
           LS+S  ++     +++T   A  P  DCS LIL +ADCL FVS   T   P   CC GLK
Sbjct: 19  LSLSSVSVLGASHHHAT---APAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLK 78

Query: 66  IVAKANADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECKCKPNFFRIALLIS 125
            V KA++ CLC  FK+SASLG+ LN+TKA +LPAAC +  P+++ C              
Sbjct: 79  TVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATC-------------- 138

Query: 126 DSSYSVDFDLDFGMFVIKFLSDCSVSIVVFDAAVTPAASPKLSPGEAPVKNET----TPA 185
                                           +V P+ +P L+PG A    ET     P 
Sbjct: 139 ------------------------------GLSVAPSTAPGLAPGVAAAGPETAGFLAPN 180

Query: 186 PTPENSAATGVVVSVGSIIAAIGVGVFYS 211
           P+  N  ++ +  S  ++++A+   +F+S
Sbjct: 199 PSSGNDGSSLIPTSFTTVLSAVLFVLFFS 180

[Close]

BLAST of Carg23982 vs. TAIR 10
Match: AT2G13820.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 3.9e-18
Identity = 40/80 (50.00%), Postives = 52/80 (65.00%), Query Frame = 0


Query: 32  DCSKLILTLADCLPFVSKDSTTTTPAKACCLGLKIVAKANADCLCHTFKNSASLGIVLNV 91
           DCS LIL +ADCL FV+  ST   P   CC GLK V +   +CLC  FKNS SLG+ L++
Sbjct: 26  DCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTLDL 85

Query: 92  TKALSLPAACDISDPALSEC 112
           +KA SLP+ C ++ P  + C
Sbjct: 86  SKAASLPSVCKVAAPPSARC 105

[Close]

BLAST of Carg23982 vs. TAIR 10
Match: AT2G13820.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-15
Identity = 57/181 (31.49%), Postives = 78/181 (43.09%), Query Frame = 0


Query: 32  DCSKLILTLADCLPFVSKDSTTTTPAKACCLGLKIVAKANADCLCHTFKNSASLGIVLNV 91
           DCS LIL +ADCL FV+  ST   P   CC GLK V +   +CLC  FKNS SLG+ L++
Sbjct: 26  DCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTLDL 85

Query: 92  TKALSLPAACDISDPALSECKCKPNFFRIALLISDSSYSVDFDLDFGMFVIKFLSDCSVS 151
           +KA SLP+ C ++ P  +                                      C +S
Sbjct: 86  SKAASLPSVCKVAAPPSAR-------------------------------------CGLS 145

Query: 152 IVVFDAAVTPAASPKLSPGEAPVK---NETTPAPTPENSAATGVVVSVGSIIAAIGVGVF 210
           +     A  P  SP    G   +    N  TP  +P +S A+ + VS   +I    +  F
Sbjct: 146 VSGDPPATAPGLSPTAGAGAPALSSGANAATPVSSPRSSDASLLSVSFAFVIFMALISSF 169

[Close]

BLAST of Carg23982 vs. TAIR 10
Match: AT5G09370.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 4.4e-14
Identity = 43/104 (41.35%), Postives = 58/104 (55.77%), Query Frame = 0


Query: 12  ALFALVVNYSTVYAALVPEGDCSKLILTLADCLPFVSKDSTTTTPAKACCLGLKIVAKAN 71
           +L  LV++ S+ Y  +    DC  L++TL  CLPF+S   T  TP  +CC  LK +    
Sbjct: 9   SLLLLVLSVSSPY--VHGASDCDTLVITLFPCLPFISIGGTADTPTASCCSSLKNILDTK 68

Query: 72  ADCLCHTFKNSASLGIVLNVTKALSLPAACDISDPALSECKCKP 116
             CLC   K  A LGI LNVTK+ +LP AC ++ P +S C   P
Sbjct: 69  PICLCEGLK-KAPLGIKLNVTKSATLPVACKLNAPPVSACDSLP 109

The following BLAST results are available for this feature:

BLAST of Carg23982 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022552.1	4.2e-107	100.00	Non-specific lipid-transfer protein-like protein, partial [Cucurbita argyrosperm...	[more]
XP_022927861.1	5.5e-75	78.67	non-specific lipid-transfer protein-like protein At5g64080 isoform X1 [Cucurbita...	[more]
XP_022927863.1	1.2e-74	78.67	non-specific lipid-transfer protein-like protein At5g64080 isoform X2 [Cucurbita...	[more]
XP_022988971.1	4.8e-71	74.41	non-specific lipid-transfer protein-like protein At5g64080 isoform X1 [Cucurbita...	[more]
XP_022988972.1	1.1e-70	74.41	non-specific lipid-transfer protein-like protein At5g64080 isoform X2 [Cucurbita...	[more]

BLAST of Carg23982 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYI9	8.4e-18	32.06	Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3...	[more]
Q9ZQI8	1.5e-14	31.49	Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3...	[more]
Q9FY78	6.2e-13	41.35	Non-specific lipid transfer protein GPI-anchored 29 OS=Arabidopsis thaliana OX=3...	[more]
Q2PE60	1.5e-11	40.70	Non-specific lipid transfer protein GPI-anchored 23 OS=Arabidopsis thaliana OX=3...	[more]
Q2PE70	8.4e-10	39.73	Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=37...	[more]

BLAST of Carg23982 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EIQ5	2.7e-75	78.67	non-specific lipid-transfer protein-like protein At5g64080 isoform X1 OS=Cucurbi...	[more]
A0A6J1EM83	5.9e-75	78.67	non-specific lipid-transfer protein-like protein At5g64080 isoform X2 OS=Cucurbi...	[more]
A0A6J1JIP6	2.3e-71	74.41	non-specific lipid-transfer protein-like protein At5g64080 isoform X1 OS=Cucurbi...	[more]
A0A6J1JEH5	5.2e-71	74.41	non-specific lipid-transfer protein-like protein At5g64080 isoform X2 OS=Cucurbi...	[more]
A0A6J1HSQ0	3.2e-36	50.00	non-specific lipid-transfer protein-like protein At5g64080 OS=Cucurbita maxima O...	[more]

BLAST of Carg23982 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64080.2	1.4e-20	48.11	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G64080.1	6.0e-19	32.06	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G13820.2	3.9e-18	50.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G13820.1	1.1e-15	31.49	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G09370.2	4.4e-14	41.35	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 88..105 score: 33.42 coord: 32..48 score: 24.62 coord: 55..69 score: 30.77
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 33..111 e-value: 0.0056 score: 25.9
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 19..111 e-value: 2.7E-12 score: 46.6
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 31..108 e-value: 7.9E-16 score: 59.7
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 32..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..187
None	No IPR available	PANTHER	PTHR33044:SF27	OS03G0192600 PROTEIN	coord: 26..201
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 40..103 e-value: 7.5135E-13 score: 59.3627
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 26..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23982-RA	Carg23982-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0008289	lipid binding