Carg23978 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23978
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor MYB36-like
Location	Carg_Chr12: 3817385 .. 3817743 (+)
RNA-Seq Expression	Carg23978
Synteny	Carg23978

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGAGCTCCATGTTGTGACAAAGCCAATGTAAAGAAAGGTCCTTGGTCCCCTGATGAGGATGCCACTCTCAAACTCTATGTGGAAACTCATGGCACTGCAGGCACCTGGATTGCTCTGCCCACAAAAGCTGGTGAACTCTCTTTCTTGTTTCCAACTTGAATTACCACCATTTATGTTTGATATCTCTCTGTTATGTATTATAAACTGCAGGGCTAAAGAGATGTGGCAAGAGCTGCAGGTTACGGTGGCTAAACTATCTTAGACCCAACATCAAGCATGGAGACTTTACAGAGGATGAAGACAATCTCATCTTTAATCTCTATAATCAATATGGAAGCAGGCAAGTTTGGTAG

mRNA sequence

ATGGGAAGAGCTCCATGTTGTGACAAAGCCAATGTAAAGAAAGGTCCTTGGTCCCCTGATGAGGATGCCACTCTCAAACTCTATGTGGAAACTCATGGCACTGCAGGCACCTGGATTGCTCTGCCCACAAAAGCTGGGCTAAAGAGATGTGGCAAGAGCTGCAGGTTACGGTGGCTAAACTATCTTAGACCCAACATCAAGCATGGAGACTTTACAGAGGATGAAGACAATCTCATCTTTAATCTCTATAATCAATATGGAAGCAGGCAAGTTTGGTAG

Coding sequence (CDS)

ATGGGAAGAGCTCCATGTTGTGACAAAGCCAATGTAAAGAAAGGTCCTTGGTCCCCTGATGAGGATGCCACTCTCAAACTCTATGTGGAAACTCATGGCACTGCAGGCACCTGGATTGCTCTGCCCACAAAAGCTGGGCTAAAGAGATGTGGCAAGAGCTGCAGGTTACGGTGGCTAAACTATCTTAGACCCAACATCAAGCATGGAGACTTTACAGAGGATGAAGACAATCTCATCTTTAATCTCTATAATCAATATGGAAGCAGGCAAGTTTGGTAG

Protein sequence

MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLNYLRPNIKHGDFTEDEDNLIFNLYNQYGSRQVW

Homology

[Close]

BLAST of Carg23978 vs. NCBI nr
Match: KAG7020636.1 (Transcription factor RAX2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 208.8 bits (530), Expect = 2.0e-50
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSRQVW 93
          YLRPNIKHGDFTEDEDNLIFNLYNQYGSRQVW
Sbjct: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSRQVW 92

[Close]

BLAST of Carg23978 vs. NCBI nr
Match: KAG6585729.1 (Clathrin interactor EPSIN 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 208.8 bits (530), Expect = 2.0e-50
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSRQVW 93
          YLRPNIKHGDFTEDEDNLIFNLYNQYGSRQVW
Sbjct: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSRQVW 92

[Close]

BLAST of Carg23978 vs. NCBI nr
Match: XP_022951223.1 (transcription factor MYB36-like [Cucurbita moschata])

HSP 1 Score: 200.7 bits (509), Expect = 5.6e-48
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHGDFTEDEDNLIFNLYNQYGSR
Sbjct: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 89

[Close]

BLAST of Carg23978 vs. NCBI nr
Match: XP_023537883.1 (transcription factor MYB36-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023537884.1 transcription factor MYB36-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.1 bits (505), Expect = 1.6e-47
Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHGDFTE+EDNLIFNLYNQYGSR
Sbjct: 61 YLRPNIKHGDFTEEEDNLIFNLYNQYGSR 89

[Close]

BLAST of Carg23978 vs. NCBI nr
Match: XP_023002574.1 (transcription factor MYB36-like [Cucurbita maxima])

HSP 1 Score: 198.7 bits (504), Expect = 2.1e-47
Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHGDFTEDEDNLIFNLYNQ+GSR
Sbjct: 61 YLRPNIKHGDFTEDEDNLIFNLYNQHGSR 89

[Close]

BLAST of Carg23978 vs. ExPASy Swiss-Prot
Match: Q9SJL7 (Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.3e-39
Identity = 69/89 (77.53%), Postives = 79/89 (88.76%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVK+GPWSP+EDA LK Y+E  GT G WIALP KAGL+RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNI+HGDFTE+EDN+I++L+   GSR
Sbjct: 61 YLRPNIRHGDFTEEEDNIIYSLFASIGSR 89

[Close]

BLAST of Carg23978 vs. ExPASy Swiss-Prot
Match: Q9M2Y9 (Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 2.4e-38
Identity = 69/89 (77.53%), Postives = 76/89 (85.39%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVKKGPWSP+EDA LK Y+E  GT G WIALP K GLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHG F+E+E+N+I +LY   GSR
Sbjct: 61 YLRPNIKHGGFSEEEENIICSLYLTIGSR 89

[Close]

BLAST of Carg23978 vs. ExPASy Swiss-Prot
Match: Q9FKL2 (Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.2e-37
Identity = 67/89 (75.28%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVKKGPWSP+ED  LK Y++ +GT G WIALP K GLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHG F+E+ED +I +LY   GSR
Sbjct: 61 YLRPNIKHGGFSEEEDRIILSLYISIGSR 89

[Close]

BLAST of Carg23978 vs. ExPASy Swiss-Prot
Match: Q9FG68 (Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 3.9e-36
Identity = 62/89 (69.66%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDK  VK+GPWSP+ED+ L+ Y+E +G  G WI+ P KAGL+RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHGDF+E+ED +IF+L+   GSR
Sbjct: 61 YLRPNIKHGDFSEEEDRIIFSLFAAIGSR 89

[Close]

BLAST of Carg23978 vs. ExPASy Swiss-Prot
Match: F4JSU0 (Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 9.6e-35
Identity = 62/89 (69.66%), Postives = 72/89 (80.90%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDK  VKKGPWS +EDA LK Y+E HGT   WI+LP + G+KRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPN+KHG FT++ED +I +LY   GSR
Sbjct: 61 YLRPNLKHGGFTDEEDYIICSLYITIGSR 89

[Close]

BLAST of Carg23978 vs. ExPASy TrEMBL
Match: A0A6J1GH52 (transcription factor MYB36-like OS=Cucurbita moschata OX=3662 GN=LOC111454127 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.7e-48
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHGDFTEDEDNLIFNLYNQYGSR
Sbjct: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 89

[Close]

BLAST of Carg23978 vs. ExPASy TrEMBL
Match: A0A6J1KQU4 (transcription factor MYB36-like OS=Cucurbita maxima OX=3661 GN=LOC111496394 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.0e-47
Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHGDFTEDEDNLIFNLYNQ+GSR
Sbjct: 61 YLRPNIKHGDFTEDEDNLIFNLYNQHGSR 89

[Close]

BLAST of Carg23978 vs. ExPASy TrEMBL
Match: A0A1S3BB79 (transcription factor RAX3-like OS=Cucumis melo OX=3656 GN=LOC103487802 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.6e-43
Identity = 80/89 (89.89%), Postives = 84/89 (94.38%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCC+K  VKKGPWSPDEDA LK YVETHG AGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHG+FTE+EDN+IFNLYNQYGSR
Sbjct: 61 YLRPNIKHGEFTEEEDNVIFNLYNQYGSR 89

[Close]

BLAST of Carg23978 vs. ExPASy TrEMBL
Match: A0A0A0LR01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G352410 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.6e-43
Identity = 79/89 (88.76%), Postives = 84/89 (94.38%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCC+K  VKKGPWSPDEDA LK YVETHG AGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHG+FTE+EDN+IFNL+NQYGSR
Sbjct: 61 YLRPNIKHGEFTEEEDNVIFNLFNQYGSR 89

[Close]

BLAST of Carg23978 vs. ExPASy TrEMBL
Match: A0A2P5DTP6 (Octamer-binding transcription factor OS=Parasponia andersonii OX=3476 GN=PanWU01x14_033380 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.4e-41
Identity = 76/92 (82.61%), Postives = 85/92 (92.39%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVK+GPWSP+EDATLK Y+ETHGT G WIALP KAGL+RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKRGPWSPEEDATLKTYLETHGTGGNWIALPRKAGLRRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSRQVW 93
          YLRP+IKHG FTE+ED++I NLYNQ GSRQV+
Sbjct: 61 YLRPDIKHGGFTEEEDHIICNLYNQMGSRQVY 92

[Close]

BLAST of Carg23978 vs. TAIR 10
Match: AT2G36890.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 163.3 bits (412), Expect = 9.2e-41
Identity = 69/89 (77.53%), Postives = 79/89 (88.76%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVK+GPWSP+EDA LK Y+E  GT G WIALP KAGL+RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNI+HGDFTE+EDN+I++L+   GSR
Sbjct: 61 YLRPNIRHGDFTEEEDNIIYSLFASIGSR 89

[Close]

BLAST of Carg23978 vs. TAIR 10
Match: AT5G65790.1 (myb domain protein 68 )

HSP 1 Score: 160.6 bits (405), Expect = 6.0e-40
Identity = 70/89 (78.65%), Postives = 76/89 (85.39%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVKKGPWSP+EDA LK Y+E  GT G WIALP K GL+RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKDYIENSGTGGNWIALPQKIGLRRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHG F+E+EDN+I NLY   GSR
Sbjct: 61 YLRPNIKHGGFSEEEDNIICNLYVTIGSR 89

[Close]

BLAST of Carg23978 vs. TAIR 10
Match: AT3G49690.1 (myb domain protein 84 )

HSP 1 Score: 159.1 bits (401), Expect = 1.7e-39
Identity = 69/89 (77.53%), Postives = 76/89 (85.39%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVKKGPWSP+EDA LK Y+E  GT G WIALP K GLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHG F+E+E+N+I +LY   GSR
Sbjct: 61 YLRPNIKHGGFSEEEENIICSLYLTIGSR 89

[Close]

BLAST of Carg23978 vs. TAIR 10
Match: AT5G57620.1 (myb domain protein 36 )

HSP 1 Score: 156.8 bits (395), Expect = 8.6e-39
Identity = 67/89 (75.28%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVKKGPWSP+ED  LK Y++ +GT G WIALP K GLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHG F+E+ED +I +LY   GSR
Sbjct: 61 YLRPNIKHGGFSEEEDRIILSLYISIGSR 89

[Close]

BLAST of Carg23978 vs. TAIR 10
Match: AT5G23000.1 (myb domain protein 37 )

HSP 1 Score: 151.8 bits (382), Expect = 2.8e-37
Identity = 62/89 (69.66%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDK  VK+GPWSP+ED+ L+ Y+E +G  G WI+ P KAGL+RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHGDF+E+ED +IF+L+   GSR
Sbjct: 61 YLRPNIKHGDFSEEEDRIIFSLFAAIGSR 89

The following BLAST results are available for this feature:

BLAST of Carg23978 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020636.1	2.0e-50	100.00	Transcription factor RAX2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6585729.1	2.0e-50	100.00	Clathrin interactor EPSIN 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022951223.1	5.6e-48	100.00	transcription factor MYB36-like [Cucurbita moschata]	[more]
XP_023537883.1	1.6e-47	98.88	transcription factor MYB36-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_0235...	[more]
XP_023002574.1	2.1e-47	98.88	transcription factor MYB36-like [Cucurbita maxima]	[more]

BLAST of Carg23978 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJL7	1.3e-39	77.53	Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1	[more]
Q9M2Y9	2.4e-38	77.53	Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1	[more]
Q9FKL2	1.2e-37	75.28	Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1	[more]
Q9FG68	3.9e-36	69.66	Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1	[more]
F4JSU0	9.6e-35	69.66	Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1	[more]

BLAST of Carg23978 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GH52	2.7e-48	100.00	transcription factor MYB36-like OS=Cucurbita moschata OX=3662 GN=LOC111454127 PE...	[more]
A0A6J1KQU4	1.0e-47	98.88	transcription factor MYB36-like OS=Cucurbita maxima OX=3661 GN=LOC111496394 PE=4...	[more]
A0A1S3BB79	2.6e-43	89.89	transcription factor RAX3-like OS=Cucumis melo OX=3656 GN=LOC103487802 PE=4 SV=1	[more]
A0A0A0LR01	7.6e-43	88.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G352410 PE=4 SV=1	[more]
A0A2P5DTP6	2.4e-41	82.61	Octamer-binding transcription factor OS=Parasponia andersonii OX=3476 GN=PanWU01...	[more]

BLAST of Carg23978 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36890.1	9.2e-41	77.53	Duplicated homeodomain-like superfamily protein	[more]
AT5G65790.1	6.0e-40	78.65	myb domain protein 68	[more]
AT3G49690.1	1.7e-39	77.53	myb domain protein 84	[more]
AT5G57620.1	8.6e-39	75.28	myb domain protein 36	[more]
AT5G23000.1	2.8e-37	69.66	myb domain protein 37	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 13..64 e-value: 6.5E-9 score: 45.6
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 9..62 score: 10.255157
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 16..62 e-value: 1.82553E-6 score: 39.0958
None	No IPR available	GENE3D	1.10.10.60		coord: 6..68 e-value: 1.1E-17 score: 65.6
None	No IPR available	PANTHER	PTHR48000:SF36	OS09G0431300 PROTEIN	coord: 1..89
None	No IPR available	PANTHER	PTHR48000	OS09G0431300 PROTEIN	coord: 1..89
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 14..62 e-value: 2.7E-12 score: 46.7
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..66 score: 18.182051
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 15..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23978-RA	Carg23978-RA	mRNA