Carg23942 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23942
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	PHD finger protein ALFIN-LIKE 4
Location	Carg_Chr12: 4025006 .. 4028482 (+)
RNA-Seq Expression	Carg23942
Synteny	Carg23942

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTAATTTCACTTCTCTCATCCGATTGAAGTCCGCGTTCATCTCCTCTCTATGTCCAATTTCCACTGTTGTTTCAGAGGTCAAATATTTGGCTGTTTTTTTTCCCTCCTTTTGCTTTCTCTCCTCCCTTCTTCCTCGCCGTGTTTCTCGATCTGTTGTTCATTTTTCTCTCTGTCAATCTTTCACTCTCTATCAATTTTGTGGCGCTTCCAGTTCGAAGGGTGAGAGCTGTCGGCCATGGACGGAGGTGCTCCGTACAATCCACGTACTGTGGAAGAGGTGTTTAGGGATTTCAAGGGCCGGAGAGCTGGTTTAATTAAGGCTCTCACTACTGGTCAAGTCTTACTTTGTGTTCTTCCTTTGAAATTCTTTCGCGCTTTTGTCCTTTTGCTTTTCTGGTTTTTATTGATTTTTTTCCTCTCATAATTACCAGTTCTGCTTTTGTGATTGCAGATGTTGAAGAGTTCTACCAGCAATGTGATCCTGGTTTGATTTTATTGCTGCTCGTTTATGTTTTTAGATTCTTGTGTGCGTTGTCCGAAAGAGATGTTAGTAGTTTCTTGCTAGGAACCGAGATTTGACCACTGCAAAGTTCAACTAAAGAGATTACAGAATCGATGTGTTTTGATGTTTTCATCGGCTTAATTTTCTAAGCCAATTTGTCATTTCTTTCTTTAGTAAGCTGGAAGTAATTAGCTTTAATGCTAATATTGTGATATAATTTTGAAATGGCTTGGCTTAGGAAGAACTAAGCATGTATTGTTCACTAATTTTTAACACATTTGTCACGCGTTGTGTCTATTTCCAATGGAATTTTTGTTTGAATTATAACCTAAATTTTCTTAAATTACAGAGAAAGAAAATCTCTGCCTTTACGGGTTTCCTAGTGAGCAGTGGGAAGTCAATTTACCAGCCGAAGAGGTGCCTCCAGAGCTTCCAGAACCTGCGCTGGGCATAAATTTTGCTAGAGACGGGATGCAAGAAAAAGACTGGCTATCCTTGGTTGCTGTGCATAGTGATGTTTGGCTGCTTTCTGTGGCATTTTATTTTGGAGCTAGGTTTGGATTTGATAAGACAGATAGGTATGTGTTATTCTGACCTGCACTTCCTTATTTTATAGTTGTAGCGAAGGCCTTGGTATGAGCTTCAAGCCTCTCTCTGTCTTTTAATTGTCTTTGAGTTGTTCTTAATATAATATTTGATTCAATGATTTCTCAGTTCATGTGTAGTGGGAAACTGTTTTGCTTTGCCGTTGGATTCTTTCTTTGGGTATTGGTGATAGGTAGATTGTAAGCCCATGCATGCTTTCTATGTGCTAAATTTTTAAAAAATGGAGTTCTTTTGTGGTATGCTATAACTTGGTTAGGTTATGGATTGAATTTGTATACCCAATCTCTTTCTCACAAGGGTTTGTTACAAACTGTTTACTTCTTCTTTTCTCATAATCATATGTTTTATAAATTATATTCGGCCTCACATCCCAAAACATATGCTTTATGCTCTGAAGCATAAACACTTGTGAGTAATGTGTTTGCTCAATACGTGGTGGACACTTGTTGCATATATCGGACATGAGTTGGGTACTTGTTTCCTGAAGCATTGTGTATTTCTTCACTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTTTTAAATTCATCACTTCTTTTATATCTACTTCTAAATGAATATATACCAAACTAATGCATATTTTTAATACAAAAGGGTATTTTATAAAATGTAAATTTAAGCAAGCATGCCTTTTGCCATGCTCCTGTCCTGATTTTATAGAAAATGATGTGCAGTGTCTGGCATGCTGTGGCTTCATAGGTTTTATCTCCCTGATGTACATCGCGAGTTTTTCAAAGGAGTTGTCCCCTTGACATGTTTTCATAAAGTTTTTGATTTCACACGATTTCATCAAGTTTTGTTTTCAGGATTCTATTTCAGTGTTTGACTTCCAGATTTTTCATTTGCATTTCACATGTTTGATAAGATTATCCTAACTTAAATGCATAAACTAGGTTCGTAGCTGAGGTAAAGGATGATTAACTTACTTCAGGCTTCATTATCATGATGGAGAGTCCATGTTTTACTTTCTCTGTTTTGTTCCAACTCTCAAGGTGTAGGATAATCAGCATAAACACACTCTATGTTCTTGTGGTTTCTTCATTACAACAGGGTCCTTGACATGTTCTGTTGCTTTTGTTGCAGGAAGCGTCTATTTAATATGATAAATGATCTTCCAACAATATTTGAAGTTGTGACAGGGACAGCCAAAAAACAAGTTAAGGATAAATCATCAGTTTCAAATCATAGCAGTAATAAATCTAAATCAAATCCAAAGGTTTGAAAGATATTTTTAATCGTGCTTTCTCCCCTTTTCTTAGTTTTTTTAGCCTCTTCAGCTTAAAATGGCCATAGACACTACAACTACTAGTAGTTATTTTTCATCTCTAATGGTTTGGCTGAGGTGCAGCCTTGTAGAAACCTTCTACTTGCATCTTAGATGCCGGAATCACGACCTTCCACAATGGTATGATATTGTCTACTTTGAGCATAAGCTCTCATGGCTTTGCTCTGGGCTTTCCCAAAAGGCCTCGTACCAATGAAGATGTATTCCTTATAAACCCATGATCATTCCCTAAATTAGCCAATGTGGGACTCCCTCCTAACTACAGTAAATATACTATACTACAGTAGATTGATCAATATGTGATTCAATCCATGATGGAGGCAACTTATTAAGCATATTTCTTGGCATATTTTTTCAATATTCAGCGGAGTTCTGAACCTCAAATAAAAACTACGAAGGCAGTTCAATCAAAAGATGAGGACGAGGAAGGTTTGGATGAGGAAGACGAGGAAGAACACGGTGAAACACTTTGTGGAGCTTGTGGAGAGAATTATGCATCTGATGAGTTCTGGATTTGCTGTGACATATGTGAGAAATGGTTCCATGGGAAATGTGTAAAGATCACTCCGGCAAGGGCAGAGCATATTAAGCAGTATAAATGTCCATCTTGCAGCAACAAAAGAATCCGACCCTGATGTTGTTTAATTGTTAGCACCAACAACTTCCCCTGCCTCCCAAAACCAAAGCAAAAAGAGAAAACAAAAGGAAAAAGAACCAAGAGATGTCAAAGGGTTCTACTTAGGATCTCAGCTTAGACGGCTAATTGTGTATTAGGATTAGTTTAAACTTTACATTAGGACACTAGACATTCTATGTGTATTTGTGGACATAATCCTTTTTGCTCAAGTATTGTATGAACTATATGTATTTTGTATGTGCTATAATGTGTTCTTGTCAAGGCTTATATTTGACAGATGCCTTGCTCTATTGTACATGCCGTTCGGGTCATGGGGACGCAACCGGGTGAGGTTTGGTTTGGTTTGATTGGCGGGTTTATTATGCATTGAAGATTAGTTGCCCTCACATTCCATCTCATACCAATTTGATAGCAATTGACA

mRNA sequence

ATTTAATTTCACTTCTCTCATCCGATTGAAGTCCGCGTTCATCTCCTCTCTATGTCCAATTTCCACTGTTGTTTCAGAGGTCAAATATTTGGCTGTTTTTTTTCCCTCCTTTTGCTTTCTCTCCTCCCTTCTTCCTCGCCGTGTTTCTCGATCTGTTGTTCATTTTTCTCTCTGTCAATCTTTCACTCTCTATCAATTTTGTGGCGCTTCCAGTTCGAAGGGTGAGAGCTGTCGGCCATGGACGGAGGTGCTCCGTACAATCCACGTACTGTGGAAGAGGTGTTTAGGGATTTCAAGGGCCGGAGAGCTGGTTTAATTAAGGCTCTCACTACTGATGTTGAAGAGTTCTACCAGCAATGTGATCCTGAGAAAGAAAATCTCTGCCTTTACGGGTTTCCTAGTGAGCAGTGGGAAGTCAATTTACCAGCCGAAGAGGTGCCTCCAGAGCTTCCAGAACCTGCGCTGGGCATAAATTTTGCTAGAGACGGGATGCAAGAAAAAGACTGGCTATCCTTGGTTGCTGTGCATAGTGATGTTTGGCTGCTTTCTGTGGCATTTTATTTTGGAGCTAGGTTTGGATTTGATAAGACAGATAGGAAGCGTCTATTTAATATGATAAATGATCTTCCAACAATATTTGAAGTTGTGACAGGGACAGCCAAAAAACAAGTTAAGGATAAATCATCAGTTTCAAATCATAGCAGTAATAAATCTAAATCAAATCCAAAGCGGAGTTCTGAACCTCAAATAAAAACTACGAAGGCAGTTCAATCAAAAGATGAGGACGAGGAAGGTTTGGATGAGGAAGACGAGGAAGAACACGGTGAAACACTTTGTGGAGCTTGTGGAGAGAATTATGCATCTGATGAGTTCTGGATTTGCTGTGACATATGTGAGAAATGGTTCCATGGGAAATGTGTAAAGATCACTCCGGCAAGGGCAGAGCATATTAAGCAGTATAAATGTCCATCTTGCAGCAACAAAAGAATCCGACCCTGATGTTGTTTAATTGTTAGCACCAACAACTTCCCCTGCCTCCCAAAACCAAAGCAAAAAGAGAAAACAAAAGGAAAAAGAACCAAGAGATGTCAAAGGGTTCTACTTAGGATCTCAGCTTAGACGGCTAATTGTGTATTAGGATTAGTTTAAACTTTACATTAGGACACTAGACATTCTATGTGTATTTGTGGACATAATCCTTTTTGCTCAAGTATTGTATGAACTATATGTATTTTGTATGTGCTATAATGTGTTCTTGTCAAGGCTTATATTTGACAGATGCCTTGCTCTATTGTACATGCCGTTCGGGTCATGGGGACGCAACCGGGTGAGGTTTGGTTTGGTTTGATTGGCGGGTTTATTATGCATTGAAGATTAGTTGCCCTCACATTCCATCTCATACCAATTTGATAGCAATTGACA

Coding sequence (CDS)

ATGGACGGAGGTGCTCCGTACAATCCACGTACTGTGGAAGAGGTGTTTAGGGATTTCAAGGGCCGGAGAGCTGGTTTAATTAAGGCTCTCACTACTGATGTTGAAGAGTTCTACCAGCAATGTGATCCTGAGAAAGAAAATCTCTGCCTTTACGGGTTTCCTAGTGAGCAGTGGGAAGTCAATTTACCAGCCGAAGAGGTGCCTCCAGAGCTTCCAGAACCTGCGCTGGGCATAAATTTTGCTAGAGACGGGATGCAAGAAAAAGACTGGCTATCCTTGGTTGCTGTGCATAGTGATGTTTGGCTGCTTTCTGTGGCATTTTATTTTGGAGCTAGGTTTGGATTTGATAAGACAGATAGGAAGCGTCTATTTAATATGATAAATGATCTTCCAACAATATTTGAAGTTGTGACAGGGACAGCCAAAAAACAAGTTAAGGATAAATCATCAGTTTCAAATCATAGCAGTAATAAATCTAAATCAAATCCAAAGCGGAGTTCTGAACCTCAAATAAAAACTACGAAGGCAGTTCAATCAAAAGATGAGGACGAGGAAGGTTTGGATGAGGAAGACGAGGAAGAACACGGTGAAACACTTTGTGGAGCTTGTGGAGAGAATTATGCATCTGATGAGTTCTGGATTTGCTGTGACATATGTGAGAAATGGTTCCATGGGAAATGTGTAAAGATCACTCCGGCAAGGGCAGAGCATATTAAGCAGTATAAATGTCCATCTTGCAGCAACAAAAGAATCCGACCCTGA

Protein sequence

MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKTTKAVQSKDEDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRIRP

Homology

[Close]

BLAST of Carg23942 vs. NCBI nr
Match: XP_022951575.1 (PHD finger protein ALFIN-LIKE 4-like isoform X1 [Cucurbita moschata] >KAG7020671.1 PHD finger protein ALFIN-LIKE 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 525.4 bits (1352), Expect = 2.7e-145
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKTTKAVQSK 180
           KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKTTKAVQSK
Sbjct: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKTTKAVQSK 180

Query: 181 DEDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           DEDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 DEDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRIRP 254
           YKCPSCSNKRIRP
Sbjct: 241 YKCPSCSNKRIRP 253

[Close]

BLAST of Carg23942 vs. NCBI nr
Match: XP_022997242.1 (PHD finger protein ALFIN-LIKE 4-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 522.3 bits (1344), Expect = 2.3e-144
Identity = 251/253 (99.21%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKTTKAVQSK 180
           KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIK+TKAVQSK
Sbjct: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSTKAVQSK 180

Query: 181 DEDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           DEDEEGL+EEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 DEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRIRP 254
           YKCPSCSNKRIRP
Sbjct: 241 YKCPSCSNKRIRP 253

[Close]

BLAST of Carg23942 vs. NCBI nr
Match: XP_023537594.1 (PHD finger protein ALFIN-LIKE 4-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 521.9 bits (1343), Expect = 3.0e-144
Identity = 251/253 (99.21%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKTTKAVQSK 180
           KRLF+MINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIK+TKAVQSK
Sbjct: 121 KRLFDMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSTKAVQSK 180

Query: 181 DEDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           DEDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 DEDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRIRP 254
           YKCPSCSNKRIRP
Sbjct: 241 YKCPSCSNKRIRP 253

[Close]

BLAST of Carg23942 vs. NCBI nr
Match: XP_023002572.1 (PHD finger protein ALFIN-LIKE 4-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 521.5 bits (1342), Expect = 3.9e-144
Identity = 251/253 (99.21%), Postives = 252/253 (99.60%), Query Frame = 0


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGAPYNPRTVEEVF DFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGAPYNPRTVEEVFMDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKTTKAVQSK 180
           KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIK+TKAVQSK
Sbjct: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSTKAVQSK 180

Query: 181 DEDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           DEDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 DEDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRIRP 254
           YKCPSCSNKRIRP
Sbjct: 241 YKCPSCSNKRIRP 253

[Close]

BLAST of Carg23942 vs. NCBI nr
Match: XP_022962095.1 (PHD finger protein ALFIN-LIKE 4-like isoform X1 [Cucurbita moschata] >XP_023546198.1 PHD finger protein ALFIN-LIKE 4-like isoform X1 [Cucurbita pepo subsp. pepo] >KAG7029537.1 PHD finger protein ALFIN-LIKE 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 520.4 bits (1339), Expect = 8.7e-144
Identity = 250/253 (98.81%), Postives = 252/253 (99.60%), Query Frame = 0


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKTTKAVQSK 180
           KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIK+ KAVQSK
Sbjct: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSK 180

Query: 181 DEDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           DEDEEGL+EEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 DEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRIRP 254
           YKCPSCSNKRIRP
Sbjct: 241 YKCPSCSNKRIRP 253

[Close]

BLAST of Carg23942 vs. ExPASy Swiss-Prot
Match: O81488 (PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=AL4 PE=1 SV=2)

HSP 1 Score: 430.3 bits (1105), Expect = 1.6e-119
Identity = 205/254 (80.71%), Postives = 226/254 (88.98%), Query Frame = 0


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           M+ G  YNPRTVEEVFRDFKGRRAG+IKALTTDV+EF++ CDPEKENLCLYG P+E WEV
Sbjct: 1   MEAGGAYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEP LGINFARDGM EKDWLSLVAVHSD WLL+VAF+FGARFGFDK DR
Sbjct: 61  NLPAEEVPPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKTTKAVQSK 180
           KRLFNM+NDLPTIFEVV GTAKKQ KDKSSVSN+SSN+SKS+ KR SE + K +K     
Sbjct: 121 KRLFNMVNDLPTIFEVVAGTAKKQGKDKSSVSNNSSNRSKSSSKRGSESRAKFSKPEPKD 180

Query: 181 D--EDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHI 240
           D  E+EEG++EEDE+E GET CGACGE+YA+DEFWICCD+CE WFHGKCVKITPARAEHI
Sbjct: 181 DEEEEEEGVEEEDEDEQGETQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHI 240

Query: 241 KQYKCPSCSNKRIR 253
           KQYKCPSCSNKR R
Sbjct: 241 KQYKCPSCSNKRAR 254

[Close]

BLAST of Carg23942 vs. ExPASy Swiss-Prot
Match: Q5XEM9 (PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=AL5 PE=2 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 3.7e-113
Identity = 193/261 (73.95%), Postives = 229/261 (87.74%), Query Frame = 0


Query: 1   MDGG-APYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWE 60
           M+GG A Y+PRTVEEVFRDFKGRRAG+I+ALTTDVE+F+QQCDPEK+NLCLYGFP+E WE
Sbjct: 1   MEGGTAHYSPRTVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDPEKQNLCLYGFPNEVWE 60

Query: 61  VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTD 120
           VNLPAEEVPPELPEPALGINFARDGMQE++WLSLVAVHSD WLLSV+FYFG+RFGFD+ D
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGMQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRAD 120

Query: 121 RKRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKTTKAVQS 180
           RKRLF+MIN++PT++EVVTG A+KQ K+  S +N + N+SKSN K     + K++K + +
Sbjct: 121 RKRLFSMINEVPTVYEVVTGNAEKQTKEMPSSANQNGNRSKSNSKMRG-LESKSSKTIHA 180

Query: 181 KDEDE-------EGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITP 240
           KDE+E       E  ++EDE+EHGETLCGACG+NYASDEFWICCD+CEKWFHG+CVKITP
Sbjct: 181 KDEEEGLELEEGEEEEDEDEDEHGETLCGACGDNYASDEFWICCDMCEKWFHGECVKITP 240

Query: 241 ARAEHIKQYKCPSCSNKRIRP 254
           ARAEHIK YKCP+CSNKR RP
Sbjct: 241 ARAEHIKHYKCPTCSNKRARP 260

[Close]

BLAST of Carg23942 vs. ExPASy Swiss-Prot
Match: Q9M2B4 (PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=AL3 PE=1 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 1.8e-112
Identity = 197/254 (77.56%), Postives = 225/254 (88.58%), Query Frame = 0


Query: 1   MDGGAP-YNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWE 60
           M+GGA  YNPRTVEEVF+DFKGRR  ++KALTTDV+EFYQQCDPEKENLCLYG P+E+WE
Sbjct: 1   MEGGAALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWE 60

Query: 61  VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTD 120
           VNLPAEEVPPELPEPALGINFARDG+ EK+WLSLVA+HSD WLLSV+FYFG+RF F K +
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGLSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEE 120

Query: 121 RKRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPK-RSSEPQIKTTKAVQ 180
           RKRLFNMIND+PTIFEVVTG AK   KDKSS +N + NKSKSN K R+SE   K++K  Q
Sbjct: 121 RKRLFNMINDVPTIFEVVTGMAK--AKDKSSAANQNGNKSKSNSKVRTSEG--KSSKTKQ 180

Query: 181 SKDEDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHI 240
            K+EDEE +DE+DE++HGETLCGACG++  +DEFWICCD+CEKWFHGKCVKITPARAEHI
Sbjct: 181 PKEEDEE-IDEDDEDDHGETLCGACGDSDGADEFWICCDLCEKWFHGKCVKITPARAEHI 240

Query: 241 KQYKCPSCSNKRIR 253
           KQYKCPSCSNKR R
Sbjct: 241 KQYKCPSCSNKRAR 249

[Close]

BLAST of Carg23942 vs. ExPASy Swiss-Prot
Match: B8B8C5 (PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_26819 PE=3 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 2.8e-108
Identity = 195/259 (75.29%), Postives = 219/259 (84.56%), Query Frame = 0


Query: 5   APYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPA 64
           A YNPRTVEEVFRDFKGRRAGL++ALT DVE+F++QCDPEKENLCLYGFP+E WEVNLPA
Sbjct: 3   AQYNPRTVEEVFRDFKGRRAGLVRALTADVEDFFRQCDPEKENLCLYGFPNEHWEVNLPA 62

Query: 65  EEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLF 124
           EEVPPELPEPALGINFARDGMQEKDWLS+VAVHSD WLLSVAFYFGARFGFDK DRKRLF
Sbjct: 63  EEVPPELPEPALGINFARDGMQEKDWLSMVAVHSDAWLLSVAFYFGARFGFDKNDRKRLF 122

Query: 125 NMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSK-SNPKRSSEPQIKTTK-----AVQ 184
            MINDLPTIFEVV+G +K +     S +NHS++KSK SN  +SSEP+ K  K      V+
Sbjct: 123 GMINDLPTIFEVVSGKSKAK---PPSANNHSNSKSKSSNKTKSSEPRAKQPKPQPQPPVK 182

Query: 185 SKDEDEE-GLDEED---------EEEHGETLCGACGENYASDEFWICCDICEKWFHGKCV 244
           ++  +EE G D+E+         EEEHGETLCGACGE+Y +DEFWICCDICEKWFHGKCV
Sbjct: 183 NEGREEEGGPDDEEGGGGGGGGREEEHGETLCGACGESYGADEFWICCDICEKWFHGKCV 242

Query: 245 KITPARAEHIKQYKCPSCS 248
           KITPA+AEHIKQYKCPSCS
Sbjct: 243 KITPAKAEHIKQYKCPSCS 258

[Close]

BLAST of Carg23942 vs. ExPASy Swiss-Prot
Match: Q6YTY3 (PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0608400 PE=2 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 3.6e-108
Identity = 195/260 (75.00%), Postives = 219/260 (84.23%), Query Frame = 0


Query: 5   APYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPA 64
           A YNPRTVEEVFRDFKGRRAGL++ALT DVE+F++QCDPEKENLCLYGFP+E WEVNLPA
Sbjct: 3   AQYNPRTVEEVFRDFKGRRAGLVRALTADVEDFFRQCDPEKENLCLYGFPNEHWEVNLPA 62

Query: 65  EEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLF 124
           EEVPPELPEPALGINFARDGMQEKDWLS+VAVHSD WLLSVAFYFGARFGFDK DRKRLF
Sbjct: 63  EEVPPELPEPALGINFARDGMQEKDWLSMVAVHSDAWLLSVAFYFGARFGFDKNDRKRLF 122

Query: 125 NMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSK-SNPKRSSEPQIKTTK-----AVQ 184
            MINDLPTIFEVV+G +K +     S +NHS++KSK SN  +SSEP+ K  K      V+
Sbjct: 123 GMINDLPTIFEVVSGKSKAK---PPSANNHSNSKSKSSNKTKSSEPRAKQPKPQPQPPVK 182

Query: 185 SKDEDEE-GLDEED----------EEEHGETLCGACGENYASDEFWICCDICEKWFHGKC 244
           ++  +EE G D+E+          EEEHGETLCGACGE+Y +DEFWICCDICEKWFHGKC
Sbjct: 183 NEGREEEGGPDDEEGGGGGGGGGREEEHGETLCGACGESYGADEFWICCDICEKWFHGKC 242

Query: 245 VKITPARAEHIKQYKCPSCS 248
           VKITPA+AEHIKQYKCPSCS
Sbjct: 243 VKITPAKAEHIKQYKCPSCS 259

[Close]

BLAST of Carg23942 vs. ExPASy TrEMBL
Match: A0A6J1GJ74 (PHD finger protein ALFIN-LIKE 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454350 PE=3 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.3e-145
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKTTKAVQSK 180
           KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKTTKAVQSK
Sbjct: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKTTKAVQSK 180

Query: 181 DEDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           DEDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 DEDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRIRP 254
           YKCPSCSNKRIRP
Sbjct: 241 YKCPSCSNKRIRP 253

[Close]

BLAST of Carg23942 vs. ExPASy TrEMBL
Match: A0A6J1K4G7 (PHD finger protein ALFIN-LIKE 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492205 PE=3 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.1e-144
Identity = 251/253 (99.21%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKTTKAVQSK 180
           KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIK+TKAVQSK
Sbjct: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSTKAVQSK 180

Query: 181 DEDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           DEDEEGL+EEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 DEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRIRP 254
           YKCPSCSNKRIRP
Sbjct: 241 YKCPSCSNKRIRP 253

[Close]

BLAST of Carg23942 vs. ExPASy TrEMBL
Match: A0A6J1KJW0 (PHD finger protein ALFIN-LIKE 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496393 PE=3 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 1.9e-144
Identity = 251/253 (99.21%), Postives = 252/253 (99.60%), Query Frame = 0


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGAPYNPRTVEEVF DFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGAPYNPRTVEEVFMDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKTTKAVQSK 180
           KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIK+TKAVQSK
Sbjct: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSTKAVQSK 180

Query: 181 DEDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           DEDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 DEDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRIRP 254
           YKCPSCSNKRIRP
Sbjct: 241 YKCPSCSNKRIRP 253

[Close]

BLAST of Carg23942 vs. ExPASy TrEMBL
Match: A0A6J1HE48 (PHD finger protein ALFIN-LIKE 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462656 PE=3 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 4.2e-144
Identity = 250/253 (98.81%), Postives = 252/253 (99.60%), Query Frame = 0


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKTTKAVQSK 180
           KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIK+ KAVQSK
Sbjct: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSK 180

Query: 181 DEDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           DEDEEGL+EEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 DEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRIRP 254
           YKCPSCSNKRIRP
Sbjct: 241 YKCPSCSNKRIRP 253

[Close]

BLAST of Carg23942 vs. ExPASy TrEMBL
Match: A0A1S3BDT1 (PHD finger protein ALFIN-LIKE 4 OS=Cucumis melo OX=3656 GN=LOC103488515 PE=3 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 3.6e-143
Identity = 249/253 (98.42%), Postives = 251/253 (99.21%), Query Frame = 0


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKTTKAVQSK 180
           KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSN KRSSEPQIK TKAVQSK
Sbjct: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNSKRSSEPQIKNTKAVQSK 180

Query: 181 DEDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           DE+EEGL+EEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 DEEEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRIRP 254
           YKCPSCSNKRIRP
Sbjct: 241 YKCPSCSNKRIRP 253

[Close]

BLAST of Carg23942 vs. TAIR 10
Match: AT5G26210.1 (alfin-like 4 )

HSP 1 Score: 430.3 bits (1105), Expect = 1.1e-120
Identity = 205/254 (80.71%), Postives = 226/254 (88.98%), Query Frame = 0


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           M+ G  YNPRTVEEVFRDFKGRRAG+IKALTTDV+EF++ CDPEKENLCLYG P+E WEV
Sbjct: 1   MEAGGAYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEP LGINFARDGM EKDWLSLVAVHSD WLL+VAF+FGARFGFDK DR
Sbjct: 61  NLPAEEVPPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKTTKAVQSK 180
           KRLFNM+NDLPTIFEVV GTAKKQ KDKSSVSN+SSN+SKS+ KR SE + K +K     
Sbjct: 121 KRLFNMVNDLPTIFEVVAGTAKKQGKDKSSVSNNSSNRSKSSSKRGSESRAKFSKPEPKD 180

Query: 181 D--EDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHI 240
           D  E+EEG++EEDE+E GET CGACGE+YA+DEFWICCD+CE WFHGKCVKITPARAEHI
Sbjct: 181 DEEEEEEGVEEEDEDEQGETQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHI 240

Query: 241 KQYKCPSCSNKRIR 253
           KQYKCPSCSNKR R
Sbjct: 241 KQYKCPSCSNKRAR 254

[Close]

BLAST of Carg23942 vs. TAIR 10
Match: AT5G20510.1 (alfin-like 5 )

HSP 1 Score: 409.1 bits (1050), Expect = 2.6e-114
Identity = 193/261 (73.95%), Postives = 229/261 (87.74%), Query Frame = 0


Query: 1   MDGG-APYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWE 60
           M+GG A Y+PRTVEEVFRDFKGRRAG+I+ALTTDVE+F+QQCDPEK+NLCLYGFP+E WE
Sbjct: 1   MEGGTAHYSPRTVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDPEKQNLCLYGFPNEVWE 60

Query: 61  VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTD 120
           VNLPAEEVPPELPEPALGINFARDGMQE++WLSLVAVHSD WLLSV+FYFG+RFGFD+ D
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGMQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRAD 120

Query: 121 RKRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKTTKAVQS 180
           RKRLF+MIN++PT++EVVTG A+KQ K+  S +N + N+SKSN K     + K++K + +
Sbjct: 121 RKRLFSMINEVPTVYEVVTGNAEKQTKEMPSSANQNGNRSKSNSKMRG-LESKSSKTIHA 180

Query: 181 KDEDE-------EGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITP 240
           KDE+E       E  ++EDE+EHGETLCGACG+NYASDEFWICCD+CEKWFHG+CVKITP
Sbjct: 181 KDEEEGLELEEGEEEEDEDEDEHGETLCGACGDNYASDEFWICCDMCEKWFHGECVKITP 240

Query: 241 ARAEHIKQYKCPSCSNKRIRP 254
           ARAEHIK YKCP+CSNKR RP
Sbjct: 241 ARAEHIKHYKCPTCSNKRARP 260

[Close]

BLAST of Carg23942 vs. TAIR 10
Match: AT3G42790.1 (alfin-like 3 )

HSP 1 Score: 406.8 bits (1044), Expect = 1.3e-113
Identity = 197/254 (77.56%), Postives = 225/254 (88.58%), Query Frame = 0


Query: 1   MDGGAP-YNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWE 60
           M+GGA  YNPRTVEEVF+DFKGRR  ++KALTTDV+EFYQQCDPEKENLCLYG P+E+WE
Sbjct: 1   MEGGAALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWE 60

Query: 61  VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTD 120
           VNLPAEEVPPELPEPALGINFARDG+ EK+WLSLVA+HSD WLLSV+FYFG+RF F K +
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGLSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEE 120

Query: 121 RKRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPK-RSSEPQIKTTKAVQ 180
           RKRLFNMIND+PTIFEVVTG AK   KDKSS +N + NKSKSN K R+SE   K++K  Q
Sbjct: 121 RKRLFNMINDVPTIFEVVTGMAK--AKDKSSAANQNGNKSKSNSKVRTSEG--KSSKTKQ 180

Query: 181 SKDEDEEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHI 240
            K+EDEE +DE+DE++HGETLCGACG++  +DEFWICCD+CEKWFHGKCVKITPARAEHI
Sbjct: 181 PKEEDEE-IDEDDEDDHGETLCGACGDSDGADEFWICCDLCEKWFHGKCVKITPARAEHI 240

Query: 241 KQYKCPSCSNKRIR 253
           KQYKCPSCSNKR R
Sbjct: 241 KQYKCPSCSNKRAR 249

[Close]

BLAST of Carg23942 vs. TAIR 10
Match: AT1G14510.1 (alfin-like 7 )

HSP 1 Score: 365.9 bits (938), Expect = 2.6e-101
Identity = 175/242 (72.31%), Postives = 199/242 (82.23%), Query Frame = 0


Query: 9   PRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVP 68
           PRTVEEVF DF+GRRAGLIKAL+TDV++FY QCDPEKENLCLYG P+E WEVNLP EEVP
Sbjct: 9   PRTVEEVFSDFRGRRAGLIKALSTDVQKFYHQCDPEKENLCLYGLPNETWEVNLPVEEVP 68

Query: 69  PELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMIN 128
           PELPEPALGINFARDGMQEKDW+SLVAVHSD WL+SVAFYFGARFGF K +RKRLF MIN
Sbjct: 69  PELPEPALGINFARDGMQEKDWISLVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMIN 128

Query: 129 DLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKTTKAVQSKDEDEEGLD 188
           DLPTIFEVVTG A KQ KD+S+  N S +KS     R SE   K +K      +++E  D
Sbjct: 129 DLPTIFEVVTGNA-KQSKDQSANHNSSRSKSSGGKPRHSESHTKASKMSPPPRKEDESGD 188

Query: 189 EEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSN 248
           E++++E G  +CGACG+NY  DEFWICCD CEKWFHGKCVKITPA+AEHIK YKCPSC+ 
Sbjct: 189 EDEDDEQG-AVCGACGDNYGGDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCPSCTT 248

Query: 249 KR 251
            +
Sbjct: 249 SK 248

[Close]

BLAST of Carg23942 vs. TAIR 10
Match: AT2G02470.1 (alfin-like 6 )

HSP 1 Score: 365.5 bits (937), Expect = 3.4e-101
Identity = 183/257 (71.21%), Postives = 204/257 (79.38%), Query Frame = 0


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           M+G     PRTVEEVF DF+GRRAGLIKALT D+ +FYQ CDPEKENLCLYG P+E WEV
Sbjct: 1   MEGITHPIPRTVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGLPNETWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLP EEVPPELPEPALGINFARDGMQEKDW+SLVAVHSD WLLSVAFYFGARFGF K +R
Sbjct: 61  NLPVEEVPPELPEPALGINFARDGMQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNER 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKTTK--AVQ 180
           KRLF MIN+LPTIFEVV+G A KQ KD S  +N+S +K      R SE   K  K  +  
Sbjct: 121 KRLFQMINELPTIFEVVSGNA-KQSKDLSVNNNNSKSKPSGVKSRQSESLSKVAKMSSPP 180

Query: 181 SKDEDEEGLDEEDEEEHGE--TLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAE 240
            K+E+EE  + EDE E  E   +CGACG+NY +DEFWICCD CEKWFHGKCVKITPA+AE
Sbjct: 181 PKEEEEEEDESEDESEDDEQGAVCGACGDNYGTDEFWICCDACEKWFHGKCVKITPAKAE 240

Query: 241 HIKQYKCPSCSNKRIRP 254
           HIK YKCP+CSNKR RP
Sbjct: 241 HIKHYKCPTCSNKRARP 256

The following BLAST results are available for this feature:

BLAST of Carg23942 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951575.1	2.7e-145	100.00	PHD finger protein ALFIN-LIKE 4-like isoform X1 [Cucurbita moschata] >KAG7020671...	[more]
XP_022997242.1	2.3e-144	99.21	PHD finger protein ALFIN-LIKE 4-like isoform X1 [Cucurbita maxima]	[more]
XP_023537594.1	3.0e-144	99.21	PHD finger protein ALFIN-LIKE 4-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023002572.1	3.9e-144	99.21	PHD finger protein ALFIN-LIKE 4-like isoform X1 [Cucurbita maxima]	[more]
XP_022962095.1	8.7e-144	98.81	PHD finger protein ALFIN-LIKE 4-like isoform X1 [Cucurbita moschata] >XP_0235461...	[more]

BLAST of Carg23942 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81488	1.6e-119	80.71	PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=AL4 PE=1 SV=2	[more]
Q5XEM9	3.7e-113	73.95	PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=AL5 PE=2 SV=1	[more]
Q9M2B4	1.8e-112	77.56	PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=AL3 PE=1 SV=1	[more]
B8B8C5	2.8e-108	75.29	PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_26...	[more]
Q6YTY3	3.6e-108	75.00	PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07...	[more]

BLAST of Carg23942 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GJ74	1.3e-145	100.00	PHD finger protein ALFIN-LIKE 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1K4G7	1.1e-144	99.21	PHD finger protein ALFIN-LIKE 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KJW0	1.9e-144	99.21	PHD finger protein ALFIN-LIKE 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HE48	4.2e-144	98.81	PHD finger protein ALFIN-LIKE 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A1S3BDT1	3.6e-143	98.42	PHD finger protein ALFIN-LIKE 4 OS=Cucumis melo OX=3656 GN=LOC103488515 PE=3 SV=...	[more]

BLAST of Carg23942 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26210.1	1.1e-120	80.71	alfin-like 4	[more]
AT5G20510.1	2.6e-114	73.95	alfin-like 5	[more]
AT3G42790.1	1.3e-113	77.56	alfin-like 3	[more]
AT1G14510.1	2.6e-101	72.31	alfin-like 7	[more]
AT2G02470.1	3.4e-101	71.21	alfin-like 6	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 199..247 e-value: 2.1E-9 score: 47.2
IPR021998	Alfin, N-terminal	PFAM	PF12165	Alfin	coord: 11..139 e-value: 2.0E-69 score: 231.2
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 200..248 e-value: 1.8E-10 score: 40.5
IPR019787	Zinc finger, PHD-finger	PROSITE	PS50016	ZF_PHD_2	coord: 197..249 score: 9.5256
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 190..248 e-value: 3.3E-26 score: 92.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..174
None	No IPR available	PANTHER	PTHR12321:SF141	PHD FINGER PROTEIN ALFIN-LIKE 3-LIKE ISOFORM X1	coord: 4..253
IPR045104	Alfin	PANTHER	PTHR12321	CPG BINDING PROTEIN	coord: 4..253
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 200..246
IPR044104	Alfin1-like, PHD finger	CDD	cd15613	PHD_AL_plant	coord: 199..249 e-value: 2.68206E-31 score: 107.966
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 189..250

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23942-RA	Carg23942-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0042393	histone binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0003712	transcription coregulator activity