Carg23931 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23931
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DUF4228 domain-containing protein
Location	Carg_Chr05: 4123806 .. 4124309 (+)
RNA-Seq Expression	Carg23931
Synteny	Carg23931

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGGCTGTATCTCCCGCCGATCATCCTCCGCCGTCGCTGCCGCCGACACAATCCAACTCGTCCACTTAAATGGCCACGTCCAACACTTCCACAGCCCCATAACTGCTCGCCAAGTCACTGGAAGTTCGCCCCCGCCGGCAGAGTACTTCATCAGCACGGCAGCGCAGCTGGTCTCCCTCGCCGTCAGCCCAGCGCTTAACCCCGACGCCATACTTCAGCCGGGCAAGGTCTATTTTTTGCTCCCGTTCTCTACTCTTCATCCCGACGTTTCTCCCTCCGACTTGTCGTCCATAGCCAGAAAGCTCACCGCCGCCGCTAAGTCCGCCCCTCGTCCGCCGTGTGTTGCAGTCGGTGGTGGCGATGGTTGGAAAGCTCCGACGACTGCGAAATCGCGACAGTGGAAGCCGTTCTTGGACACAATACAAGAGAAGGCGGTGAATAAGAGCGAGTCGGATTTGCAAGATAAACATAATAATAATCGTGTTTGTATATGGGACTAA

mRNA sequence

ATGGGTGGCTGTATCTCCCGCCGATCATCCTCCGCCGTCGCTGCCGCCGACACAATCCAACTCGTCCACTTAAATGGCCACGTCCAACACTTCCACAGCCCCATAACTGCTCGCCAAGTCACTGGAAGTTCGCCCCCGCCGGCAGAGTACTTCATCAGCACGGCAGCGCAGCTGGTCTCCCTCGCCGTCAGCCCAGCGCTTAACCCCGACGCCATACTTCAGCCGGGCAAGGTCTATTTTTTGCTCCCGTTCTCTACTCTTCATCCCGACGTTTCTCCCTCCGACTTGTCGTCCATAGCCAGAAAGCTCACCGCCGCCGCTAAGTCCGCCCCTCGTCCGCCGTGTGTTGCAGTCGGTGGTGGCGATGGTTGGAAAGCTCCGACGACTGCGAAATCGCGACAGTGGAAGCCGTTCTTGGACACAATACAAGAGAAGGCGGTGAATAAGAGCGAGTCGGATTTGCAAGATAAACATAATAATAATCGTGTTTGTATATGGGACTAA

Coding sequence (CDS)

ATGGGTGGCTGTATCTCCCGCCGATCATCCTCCGCCGTCGCTGCCGCCGACACAATCCAACTCGTCCACTTAAATGGCCACGTCCAACACTTCCACAGCCCCATAACTGCTCGCCAAGTCACTGGAAGTTCGCCCCCGCCGGCAGAGTACTTCATCAGCACGGCAGCGCAGCTGGTCTCCCTCGCCGTCAGCCCAGCGCTTAACCCCGACGCCATACTTCAGCCGGGCAAGGTCTATTTTTTGCTCCCGTTCTCTACTCTTCATCCCGACGTTTCTCCCTCCGACTTGTCGTCCATAGCCAGAAAGCTCACCGCCGCCGCTAAGTCCGCCCCTCGTCCGCCGTGTGTTGCAGTCGGTGGTGGCGATGGTTGGAAAGCTCCGACGACTGCGAAATCGCGACAGTGGAAGCCGTTCTTGGACACAATACAAGAGAAGGCGGTGAATAAGAGCGAGTCGGATTTGCAAGATAAACATAATAATAATCGTGTTTGTATATGGGACTAA

Protein sequence

MGGCISRRSSSAVAAADTIQLVHLNGHVQHFHSPITARQVTGSSPPPAEYFISTAAQLVSLAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPRPPCVAVGGGDGWKAPTTAKSRQWKPFLDTIQEKAVNKSESDLQDKHNNNRVCIWD

Homology

[Close]

BLAST of Carg23931 vs. NCBI nr
Match: KAG7029841.1 (hypothetical protein SDJN02_08184, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 335.9 bits (860), Expect = 2.0e-88
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MGGCISRRSSSAVAAADTIQLVHLNGHVQHFHSPITARQVTGSSPPPAEYFISTAAQLVS 60
           MGGCISRRSSSAVAAADTIQLVHLNGHVQHFHSPITARQVTGSSPPPAEYFISTAAQLVS
Sbjct: 1   MGGCISRRSSSAVAAADTIQLVHLNGHVQHFHSPITARQVTGSSPPPAEYFISTAAQLVS 60

Query: 61  LAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPRPPCVAVGG 120
           LAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPRPPCVAVGG
Sbjct: 61  LAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPRPPCVAVGG 120

Query: 121 GDGWKAPTTAKSRQWKPFLDTIQEKAVNKSESDLQDKHNNNRVCIWD 168
           GDGWKAPTTAKSRQWKPFLDTIQEKAVNKSESDLQDKHNNNRVCIWD
Sbjct: 121 GDGWKAPTTAKSRQWKPFLDTIQEKAVNKSESDLQDKHNNNRVCIWD 167

[Close]

BLAST of Carg23931 vs. NCBI nr
Match: KAG6598890.1 (Glycosyltransferase BC10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 324.3 bits (830), Expect = 6.1e-85
Identity = 162/166 (97.59%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 2   GGCISRRSSSAVAAADTIQLVHLNGHVQHFHSPITARQVTGSSPPPAEYFISTAAQLVSL 61
           G   SRRSSSAVAAADTIQLVHLNGHVQHFHSPITARQVTGSSPPPAEYFISTAAQLVSL
Sbjct: 421 GWLFSRRSSSAVAAADTIQLVHLNGHVQHFHSPITARQVTGSSPPPAEYFISTAAQLVSL 480

Query: 62  AVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPRPPCVAVGGG 121
           AVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPRPPCVAVGGG
Sbjct: 481 AVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPRPPCVAVGGG 540

Query: 122 DGWKAPTTAKSRQWKPFLDTIQEKAVNKSESDLQDKHNNNRVCIWD 168
           DGWKAPTTAKSRQWKPFLDTIQEKAVNKS+SDLQDKHNNNRVCIWD
Sbjct: 541 DGWKAPTTAKSRQWKPFLDTIQEKAVNKSQSDLQDKHNNNRVCIWD 586

[Close]

BLAST of Carg23931 vs. NCBI nr
Match: XP_022996489.1 (uncharacterized protein LOC111491721 [Cucurbita maxima])

HSP 1 Score: 315.5 bits (807), Expect = 2.8e-82
Identity = 159/168 (94.64%), Postives = 162/168 (96.43%), Query Frame = 0


Query: 1   MGGCISRRSSSAVAAADTIQLVHLNGHVQHFHSPITARQVTGSSPPPAEYFISTAAQLVS 60
           MG CISRRSSSAVAAADTIQLVHLNGHVQHFHSPITA QVTG+SPPPAEYFISTAAQLVS
Sbjct: 1   MGVCISRRSSSAVAAADTIQLVHLNGHVQHFHSPITASQVTGNSPPPAEYFISTAAQLVS 60

Query: 61  LAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPR-PPCVAVG 120
           LAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPR PPCVAVG
Sbjct: 61  LAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPRPPPCVAVG 120

Query: 121 GGDGWKAPTTAKSRQWKPFLDTIQEKAVNKSESDLQDKHNNNRVCIWD 168
           GG+ WKAP  AKSRQWKPFLDTIQEKAVNKSESDLQDKHNNNR+CIWD
Sbjct: 121 GGNDWKAPVAAKSRQWKPFLDTIQEKAVNKSESDLQDKHNNNRICIWD 168

[Close]

BLAST of Carg23931 vs. NCBI nr
Match: XP_023547215.1 (uncharacterized protein LOC111806092 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 311.6 bits (797), Expect = 4.1e-81
Identity = 158/167 (94.61%), Postives = 160/167 (95.81%), Query Frame = 0


Query: 1   MGGCISRRSSSAVAAADTIQLVHLNGHVQHFHSPITARQVTGSSPPPAEYFISTAAQLVS 60
           MGGCISRRSSSAVAAADTIQLVHLNGHVQHFH PITARQVTG+SP PAEYFISTAAQLVS
Sbjct: 1   MGGCISRRSSSAVAAADTIQLVHLNGHVQHFHIPITARQVTGNSPRPAEYFISTAAQLVS 60

Query: 61  LAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPRPPCVAVGG 120
           +AVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPRP CVAVGG
Sbjct: 61  VAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPRPTCVAVGG 120

Query: 121 GDGWKAPTTAKSRQWKPFLDTIQEKAVNKSESDLQDKHNNNRVCIWD 168
           GD WK P  AKSRQWKPFLDTIQEKAVNKSESDLQDKHNNNRVCIWD
Sbjct: 121 GDDWKTP--AKSRQWKPFLDTIQEKAVNKSESDLQDKHNNNRVCIWD 165

[Close]

BLAST of Carg23931 vs. NCBI nr
Match: XP_011650123.1 (uncharacterized protein LOC105434722 [Cucumis sativus])

HSP 1 Score: 220.7 bits (561), Expect = 9.5e-54
Identity = 115/163 (70.55%), Postives = 130/163 (79.75%), Query Frame = 0


Query: 1   MGGCISRRSSS-AVAAADTIQLVHLNGHVQHFHSPITARQVTGSSPPPAEYFISTAAQLV 60
           MGGCIS RSSS A AAAD +Q+VHLNGHVQHFHSPITARQV G  PPPAEYFI TAAQLV
Sbjct: 1   MGGCISHRSSSTAAAAADRVQVVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLV 60

Query: 61  SLAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPR----PPC 120
           S A SPALNPD +LQPGKVYF+LP STLHPDVS +DL+SIAR+LTAAAKSA +    PPC
Sbjct: 61  STAASPALNPDVVLQPGKVYFILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPC 120

Query: 121 VAVGGGDGWKAPTTAKSRQWKPFLDTIQEKAVN---KSESDLQ 156
            A  GG+ W+  T  KSRQW+P LDTI+EK  N   + +SDL+
Sbjct: 121 EAADGGEDWRCTTAGKSRQWRPLLDTIREKPGNNCGRIDSDLE 163

[Close]

BLAST of Carg23931 vs. ExPASy TrEMBL
Match: A0A6J1K8V3 (uncharacterized protein LOC111491721 OS=Cucurbita maxima OX=3661 GN=LOC111491721 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.4e-82
Identity = 159/168 (94.64%), Postives = 162/168 (96.43%), Query Frame = 0


Query: 1   MGGCISRRSSSAVAAADTIQLVHLNGHVQHFHSPITARQVTGSSPPPAEYFISTAAQLVS 60
           MG CISRRSSSAVAAADTIQLVHLNGHVQHFHSPITA QVTG+SPPPAEYFISTAAQLVS
Sbjct: 1   MGVCISRRSSSAVAAADTIQLVHLNGHVQHFHSPITASQVTGNSPPPAEYFISTAAQLVS 60

Query: 61  LAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPR-PPCVAVG 120
           LAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPR PPCVAVG
Sbjct: 61  LAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPRPPPCVAVG 120

Query: 121 GGDGWKAPTTAKSRQWKPFLDTIQEKAVNKSESDLQDKHNNNRVCIWD 168
           GG+ WKAP  AKSRQWKPFLDTIQEKAVNKSESDLQDKHNNNR+CIWD
Sbjct: 121 GGNDWKAPVAAKSRQWKPFLDTIQEKAVNKSESDLQDKHNNNRICIWD 168

[Close]

BLAST of Carg23931 vs. ExPASy TrEMBL
Match: A0A0A0LHC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060490 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 4.6e-54
Identity = 115/163 (70.55%), Postives = 130/163 (79.75%), Query Frame = 0


Query: 1   MGGCISRRSSS-AVAAADTIQLVHLNGHVQHFHSPITARQVTGSSPPPAEYFISTAAQLV 60
           MGGCIS RSSS A AAAD +Q+VHLNGHVQHFHSPITARQV G  PPPAEYFI TAAQLV
Sbjct: 1   MGGCISHRSSSTAAAAADRVQVVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLV 60

Query: 61  SLAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPR----PPC 120
           S A SPALNPD +LQPGKVYF+LP STLHPDVS +DL+SIAR+LTAAAKSA +    PPC
Sbjct: 61  STAASPALNPDVVLQPGKVYFILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPC 120

Query: 121 VAVGGGDGWKAPTTAKSRQWKPFLDTIQEKAVN---KSESDLQ 156
            A  GG+ W+  T  KSRQW+P LDTI+EK  N   + +SDL+
Sbjct: 121 EAADGGEDWRCTTAGKSRQWRPLLDTIREKPGNNCGRIDSDLE 163

[Close]

BLAST of Carg23931 vs. ExPASy TrEMBL
Match: A0A5D3CAJ8 (DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1411G00050 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.3e-52
Identity = 112/162 (69.14%), Postives = 127/162 (78.40%), Query Frame = 0


Query: 1   MGGCISRRSSSAVAAADTIQLVHLNGHVQHFHSPITARQVTGSSPPPAEYFISTAAQLVS 60
           MGGC+S RSSS  AAAD +Q+VHLNGHVQHFHSPITARQV    PPP EYFI TAAQLVS
Sbjct: 1   MGGCVSLRSSSD-AAADRVQVVHLNGHVQHFHSPITARQVARKPPPPTEYFICTAAQLVS 60

Query: 61  LAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPR----PPCV 120
            A SPAL+PDA+LQPGKVYF+LPFSTLHPDVS +DL+SIAR+LTAAAKSA +    PPC 
Sbjct: 61  TAASPALDPDAVLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCE 120

Query: 121 AVGGGDGWKAPTTAKSRQWKPFLDTIQEKAVN---KSESDLQ 156
              GG+ WK     KSRQW+P LDTI+EK  N   + ESDL+
Sbjct: 121 TAEGGEEWKCTAAGKSRQWRPLLDTIKEKPANSCERIESDLE 161

[Close]

BLAST of Carg23931 vs. ExPASy TrEMBL
Match: A0A1S3CC70 (uncharacterized protein LOC103499134 OS=Cucumis melo OX=3656 GN=LOC103499134 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.3e-52
Identity = 112/162 (69.14%), Postives = 127/162 (78.40%), Query Frame = 0


Query: 1   MGGCISRRSSSAVAAADTIQLVHLNGHVQHFHSPITARQVTGSSPPPAEYFISTAAQLVS 60
           MGGC+S RSSS  AAAD +Q+VHLNGHVQHFHSPITARQV    PPP EYFI TAAQLVS
Sbjct: 1   MGGCVSLRSSSD-AAADRVQVVHLNGHVQHFHSPITARQVARKPPPPTEYFICTAAQLVS 60

Query: 61  LAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPR----PPCV 120
            A SPAL+PDA+LQPGKVYF+LPFSTLHPDVS +DL+SIAR+LTAAAKSA +    PPC 
Sbjct: 61  TAASPALDPDAVLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCE 120

Query: 121 AVGGGDGWKAPTTAKSRQWKPFLDTIQEKAVN---KSESDLQ 156
              GG+ WK     KSRQW+P LDTI+EK  N   + ESDL+
Sbjct: 121 TAEGGEEWKCTAAGKSRQWRPLLDTIKEKPANSCERIESDLE 161

[Close]

BLAST of Carg23931 vs. ExPASy TrEMBL
Match: W9QLQ9 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016842 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 3.1e-26
Identity = 77/176 (43.75%), Postives = 106/176 (60.23%), Query Frame = 0


Query: 1   MGGCISRRSSSAVAAADTIQLVHLNGHVQHFHSPITARQVTGSSPPPAEYFISTAAQLVS 60
           MG C+S RSSS+      +++VHLNG+V+ F  P++   VTG    P +YF+ T AQL+S
Sbjct: 1   MGSCLSCRSSSSELEFKAVRVVHLNGYVEDFEHPVSVSYVTGK---PTKYFVCTPAQLLS 60

Query: 61  LAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPRPPCVAVG- 120
               P + P+ +L+ GK+YFLLP+S L  DVSP DL+SIARKLTA AK+  R P  + G 
Sbjct: 61  CGTKP-MRPETLLERGKLYFLLPYSALQADVSPLDLASIARKLTALAKTVRRKPNKSPGR 120

Query: 121 --------GGDG--WKAPT-----TAKSRQWKPFLDTIQEKA-VNKSESDLQDKHN 160
                   GG    W +P        + R WKP LDTI+E++   +SES+LQ + N
Sbjct: 121 FSPSPAQYGGSSPVWSSPARSPNRAVRERPWKPILDTIRERSFTRRSESELQLQEN 172

[Close]

BLAST of Carg23931 vs. TAIR 10
Match: AT1G76600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21010.1); Has 220 Blast hits to 220 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 2.6e-09
Identity = 36/117 (30.77%), Postives = 63/117 (53.85%), Query Frame = 0


Query: 1   MGGCISRRSSSAVAAADTIQLVHLNGHVQHFHSPITARQV-------TGSSPPPAEYFIS 60
           MG C+S   +  V+++ T ++V +NG ++ +  P+ A QV       + SS   + YF+ 
Sbjct: 1   MGLCVSVNRNEYVSSSTTAKIVTINGDLREYDVPVLASQVLESESTSSSSSSSSSSYFLC 60

Query: 61  TAAQLVSLAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSA 111
            +  L      PA+  D ILQ  ++YF+LP S     +S SD++++A K + A + A
Sbjct: 61  NSDSLYYDDFIPAIESDEILQANQIYFVLPISKRQYRLSASDMAALAVKASVAIEKA 117

[Close]

BLAST of Carg23931 vs. TAIR 10
Match: AT1G21010.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76600.1); Has 206 Blast hits to 206 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.8 bits (125), Expect = 3.2e-07
Identity = 34/120 (28.33%), Postives = 65/120 (54.17%), Query Frame = 0


Query: 1   MGGCISRRSSSAVAAADTIQLVHLNGHVQHFHSPITARQV----------TGSSPPPAEY 60
           MG C+S R   +  ++ T+++V +NG ++ ++ P+ A QV          + SS  P+ Y
Sbjct: 1   MGICVSFRREDS-NSSPTVKIVTVNGDLREYNVPVIASQVLEAESAAAYSSSSSSRPSSY 60

Query: 61  FISTAAQLVSLAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSA 111
           FI  +  L      PA+  +  LQ  ++YF+LP S     ++ SD++++A K + A +++
Sbjct: 61  FICDSDSLYYDDFIPAIKSEEPLQADQIYFVLPISKRQSRLTASDMAALAVKASVAIQNS 119

[Close]

BLAST of Carg23931 vs. TAIR 10
Match: AT2G30230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06980.1); Has 167 Blast hits to 167 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 3.9e-05
Identity = 24/73 (32.88%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 15 AADTIQLVHLNGHVQHFHSPITARQVTGSSPPPAEYFISTAAQLVSLAVSPALNPDAILQ 74
          A D I++VHLNGHV    SP+TA ++  ++P    + +S       +     L+P++ L+
Sbjct: 17 ALDLIRIVHLNGHVDEITSPMTAGEILQANP---NHVLSKPCSQGVVRKILILSPESELK 76

Query: 75 PGKVYFLLPFSTL 88
           G +YFL+P +++
Sbjct: 77 RGSIYFLIPDTSM 86

[Close]

BLAST of Carg23931 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.5e-04
Identity = 32/124 (25.81%), Postives = 62/124 (50.00%), Query Frame = 0


Query: 1   MGGCISRRSSSAVAAADTIQLVHLNGHVQHFHSPITARQVTGSSPPPAEYFISTAAQLVS 60
           MG C SR S      +D+ +L+ L+G +Q F SP+   Q+   +P     F+  + ++  
Sbjct: 1   MGACASRES----LRSDSAKLILLDGTLQEFSSPVKVWQILQKNPTS---FVCNSDEMDF 60

Query: 61  LAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPRPPCVAVGG 120
                A+  +  L+ G++YF+LP + L+  +   +++++A K ++A         +   G
Sbjct: 61  DDAVSAVAGNEELRSGQLYFVLPLTWLNHPLRAEEMAALAVKASSA---------LTKSG 108

Query: 121 GDGW 125
           G GW
Sbjct: 121 GVGW 108

[Close]

BLAST of Carg23931 vs. TAIR 10
Match: AT1G29195.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, 4 leaf senescence stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30230.1); Has 180 Blast hits to 180 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 180; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 2.5e-04
Identity = 25/75 (33.33%), Postives = 38/75 (50.67%), Query Frame = 0


Query: 15 AADTIQLVHLNGHVQHFHSPITARQVTGSSP------PPAEYFISTAAQLVSLAVSPALN 74
          A D I++VH NGHV+     ITA ++  + P      P +         ++S      + 
Sbjct: 17 ALDVIRIVHSNGHVEEISGTITASEIMKAHPKHVLKKPSSPTSDHDERDVISATKIVIVP 76

Query: 75 PDAILQPGKVYFLLP 84
          P+A LQ GK+YFL+P
Sbjct: 77 PEAELQRGKIYFLMP 91

The following BLAST results are available for this feature:

BLAST of Carg23931 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029841.1	2.0e-88	100.00	hypothetical protein SDJN02_08184, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6598890.1	6.1e-85	97.59	Glycosyltransferase BC10, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022996489.1	2.8e-82	94.64	uncharacterized protein LOC111491721 [Cucurbita maxima]	[more]
XP_023547215.1	4.1e-81	94.61	uncharacterized protein LOC111806092 [Cucurbita pepo subsp. pepo]	[more]
XP_011650123.1	9.5e-54	70.55	uncharacterized protein LOC105434722 [Cucumis sativus]	[more]

BLAST of Carg23931 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg23931 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K8V3	1.4e-82	94.64	uncharacterized protein LOC111491721 OS=Cucurbita maxima OX=3661 GN=LOC111491721...	[more]
A0A0A0LHC0	4.6e-54	70.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060490 PE=4 SV=1	[more]
A0A5D3CAJ8	4.3e-52	69.14	DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3CC70	4.3e-52	69.14	uncharacterized protein LOC103499134 OS=Cucumis melo OX=3656 GN=LOC103499134 PE=...	[more]
W9QLQ9	3.1e-26	43.75	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_016842 PE=4 SV=1	[more]

BLAST of Carg23931 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76600.1	2.6e-09	30.77	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT1G21010.1	3.2e-07	28.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT2G30230.1	3.9e-05	32.88	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G66580.1	1.5e-04	25.81	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT1G29195.1	2.5e-04	33.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..144 e-value: 1.6E-22 score: 80.8
None	No IPR available	PANTHER	PTHR33052:SF2	OS06G0700300 PROTEIN	coord: 125..154 coord: 1..110
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 125..154 coord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23931-RA	Carg23931-RA	mRNA