Carg23879 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23879
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	F-box protein
Location	Carg_Chr06: 7287960 .. 7292284 (+)
RNA-Seq Expression	Carg23879
Synteny	Carg23879

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTTACTCTCTCTTTCTCTCATCCTTTTCATGATCATCTATTTCTTAAGCTTATCTTCCTCCCACCAAATCTCTTTCGCTCTGATTCTTCTTCTCCAACGCTTTCTTTTTGGCGACCCTTTTGGTCTCCGATCGAAGTAAGCACTCTTAATCGTTTCACTTTCTGTTTCTGTCTCTGAATGTTGCTTGTTTGTTTTTGTATCGCTACTCATTAGCTTCTTCTTTTAATTTCATGAAATGTGCATCTGTTTACTGATTTCGTTGCGGATTTTATTGAGTGATTGCCTCGTTTTTCTGATTTTTCTCTTTGATTTTCTAGGTTTTTCGCTCTGCGGTGTTGTTTCGTTGTTTGAATCTCTGTGAATTAGGGGTTTTGAATGATTTTTGTTCGATGATTGTTGAATGGGGCTTATGATTTCTAGCTAGGAAATTTTGATTTTGCATTGCGATTGAAGACTTTTTGTTTCGTAGGTTAAATTAAATCCAGTGCCATGATTGCGTGTTGTCGTCATTATATTGAGATTCTGTATATTCGTTTTTGTGTTTCGCGATTGTTCATTGGAATTATGTTCGAGTGTTTTGGTTTACGAGTTGATCAGGGTTTTAAATTTGTATCAGTGCGTATTGAGCAAGTATATGTTAGGTTTTTCAATTTCTAATTTGGGACTAAATTTGTTAAACTGCTGGATTTTCTTATGGTAAGTTGCCAGAAATGGAAGAACGTTTGGATTTCTTGGATTTGCTTGAACCCGACATGTCGAGAAAGATATTGATGTGCTTGGATGATATTTCTGATATCGTTCGTGCGAGTGCCGTCTCACGATGTTGGCAACATTTGGGTGAGTACATGAGTTAGAAAGTCCATCTCAGCTTTCGTTTTTGATTAAAATGTGGATGTAGTGTATTCTTGATATTAGTGGGAGATCCATTGTGAGATCCCATATTGGTTGGAGAGGGGAACGAAACATTTCTTATAAGGATGTGGAAACCTCTCCCTAGCAAACGCGTTTTAAAACCTTGAGGGGAACCCCTGAAGAGAAAGCTCAAAGAGAAATATCTGCTAGAGGTGGACTTGGGTTATTACAAATGGTATCAAAGCTAGACATTGGGCGGTGTGCCAGCGAGGACACTGGGCCCCCAAGGGTAGTGGATTGTGAGATCCCGCATAAGTTGGAGAGGGGAATGAAGCATTCCTTATAAGGGTTTGGAAACCTCTCCCTAGCAGACGTGTTTTAAAACCTTGCGAGGAAGCCCAGAAAGGAAAACCCAAAGAAGACAATATCTGGCTATCGGTGGGTTTGGGCTGTTACACCTTATACTTTTGTTCTATTGACCGACATTATATTTTACCTTTTTGCACTTTTTCAGTGATAGAAAATGGTCTGTCAAAGCAGCTCTGCCTTAGATCATTCCCTCCTTTGTCTAGAGTAGCTTCAATCGTTGAAGTGAACGACTCGGAAGCGAATGGACACATAGAAGTAGCATGTAGTAGTTCAAGAGATTCCAAATCCGTGCCGAGGGATCACAAAGTTTATGCTTATTTTGCCCATGCGGCTACATCGTTTCTTATGAGAAGTTGCATTTTAGAGGCACTTATTGCTTCCAGCACTGATAATGAACCCGAGGAAACCATCAACAACACGTTGGAACCAAGAGACGTGGTTGCAAGGAGAGCTTTGTATTGGTCGAGTAAGGGACAATTTAAACCTGATGTGCCTGAGACACTGATATACAGATTAGTCTCCAATTTATGCGTCGTAACTGAAATTGACATACGACCTTTCCAAGGTATTTCTGTCGACACTTCTTCTTCTTCTTATAATATTAAACTTCAAGTAGGCTTTTTCACCTTCTATATTGTTTGCTTAGATGATTGAGTCTATTTTCCTGGCCAGCATTTTTTCAGCCAGGTTCACCTATATACTCAGCAAAAGCTGTGCGTTTCCGGTTTGGTCATTTAAACCGTGTCATGAATCCTAGAAGCGATCTGACTGGGGAGTCACACTGGGGATCTGGAAACGATACGTTTATATGGACCTACACTTCTCCAGAATTTCCAATGGCTCAGGTATAATCGAAGTCTACGCTTTGTTAATGCACTCGGCGTTCTCTTATTGTCAAAGTCCATTTCCTTGCTCAAAGTGCCCGTCATTCTTCTATTGGAGACGTTCTTTTTGTATTTTAGTTGGGTCAATCAGTTAGGGGTTATCGTTTCAGATTGTAGTAATTTATACCGAAACTCTATCCGTGATCTTGGATCTTATCCACTTAGTTATTCCACATATCTGGCACTAGCATTTGATACCTTCTATTTGATTTGAACATGGTTACGATATAATGTAATAGATTTGTATTTTGTCTGGGTATTTCGCGTTCACGTGTTATTATTTCGAACTACTCTATCTCTAACCAGTGAAATGGCATCTTACTGAACAGGAGAATTACTTGCAGAAGTTCGTACTCCCTGAACCTGTTCTTTGCGTAGGAGGCATTTTACAAATTGAGCTGCTTGGCAGGGTACAAAGACAAGAAACAGATGCTTTGTTTTACATATGGTATGTTCAGTAGTATATATATGTATATACATTTTCCGCCTGCCTGTCTTCTGTAGCGCTCTGCATGTACGTATTGAAAGATTGAGATTTTTTTTTGTTGGGGGCGGGGATAGAACACAAAAATGCGATATCACATCTAAAGTTAAGGATTACAAAATTTTGAATGTACTTCTTTACTTGAAACGGATTTAGACGAACTTTTATGGAGAAGGGATATTCATGATGAGTGTCAGCGAGGACGTTGGGGCTCGAAAGGAGGTGGATTGTGAGATTCCACATCGGTTGGAGAGGGGAACGAAGCATTCTTTCTGTATAAGGGGGTGGATTGTGTTTCCACACCCTTATAAAGAATGCTTCGTTCCTCTCTTCCTAGCAAACTACCTTAAGACTACCTGGATAAGAGTAAGTCTCCCCTCTTTGGAGGAAAATGTTCCCTTCCAACTAGACAATCGTTTCTTAAAACTTTACTAAGACCGGACTCGAAAAACTTGGCTTTTAAGATTAGCACCCAAGAGGAATCCTAGAAAGTAGAAGGGAACTGACTAACTAGTCACCAATGGCACCACCCATGATGCTAACTTGAAAGGACACCAATTTATACAAAAAACGGAACTCTTACCTATTTGGATTAACAAAAGAACTCTTATCCTGAACAAAAGAAGAACGTGTCGCCAGTATGAGACGAATGAACCAAGTTCTTGCCCAGCTTGATGTCCTCAATCACACCCTTTTCCACTCCTATCGACGTGAGCCTGCCGAGGATGTCCATCCCTAAGACAAAGAGGAAAATAGAGTTTTTCTACGCCAAGAATAAGTGTGAACATCCCAACAACCTTTCCTTAGAGCCCCTTTATAATGGAGTTGAAATCGTTAAAAACTTAGATCTAACTCAACTAGTAAATTTTCCTTCTTTACAGAAAATAGAGCTAATCCATTTATCACGCCTGTACGAGCCCTTATCGATAACAGCATTCCAGGGATTCACCTTTTTTGGTGTCGCGTAGCCACTATACCAGTGAGATAGGTTCGAAACTCGTGATTTCTACCAGCGAGAATAATTTGAATACTTGTACTAGCTGAGAATAAATTTCTACCTCTTTTTTGGGTGATCGATGCGAATAAGATGAACTGTTGAACTATATATAGACTGGATTCTTGGATGAATGTGCTTGAAGTCACTAAGTCGTCCAAAACCTTTAGTTTCGTCTAGTTTTTGCTCGAGTTATCCATGAACTTATGTATGTAGAATTAAGTTTGTTGCATCTTGGACTAATAATGCCTTAACAAACTCATGTTTTCACTGCAGTGTTTCTCACGTTAAAGTTATCGGACGACCATTATCACCTTCATTTGACATCGAAATCCTCGCACCCTCAGGGGAGTTTCTTTTGAAATGTAATTATCAGGCAAAGACAACTTGTAACCAATTGATTATGCTCGAGAATGAGCCACGCACGATCCTTCCCACGTATTTGGAGAGACGTGTCGTTGAATTGCGACAGATTGTGAACATGCTTCGGGGAAATGTAGTCCAAGGTGAGTATTATGCATGGGGTGAGGAAGAAGATGAATCAGATGAAGATTTTGTTGCCTAAAAGAACAAAAGAAGAGGAAGATGAATGTGAAAAGAACAGCCTTTTTTATTGTGATGAAATAATCTGTACAAGATTGTGGCTCGTGTAGATGAATGTGAAAAGAACAGCTTTTTTATTGCCTCATGTTGGATGTAGTTAAAAAAATGTTAGTAGTAATACCACTATAGTGCAACA

mRNA sequence

AATTTTACTCTCTCTTTCTCTCATCCTTTTCATGATCATCTATTTCTTAAGCTTATCTTCCTCCCACCAAATCTCTTTCGCTCTGATTCTTCTTCTCCAACGCTTTCTTTTTGGCGACCCTTTTGGTCTCCGATCGAATTGCCAGAAATGGAAGAACGTTTGGATTTCTTGGATTTGCTTGAACCCGACATGTCGAGAAAGATATTGATGTGCTTGGATGATATTTCTGATATCGTTCGTGCGAGTGCCGTCTCACGATGTTGGCAACATTTGGTGATAGAAAATGGTCTGTCAAAGCAGCTCTGCCTTAGATCATTCCCTCCTTTGTCTAGAGTAGCTTCAATCGTTGAAGTGAACGACTCGGAAGCGAATGGACACATAGAAGTAGCATGTAGTAGTTCAAGAGATTCCAAATCCGTGCCGAGGGATCACAAAGTTTATGCTTATTTTGCCCATGCGGCTACATCGTTTCTTATGAGAAGTTGCATTTTAGAGGCACTTATTGCTTCCAGCACTGATAATGAACCCGAGGAAACCATCAACAACACGTTGGAACCAAGAGACGTGGTTGCAAGGAGAGCTTTGTATTGGTCGAGTAAGGGACAATTTAAACCTGATGTGCCTGAGACACTGATATACAGATTAGTCTCCAATTTATGCGTCGTAACTGAAATTGACATACGACCTTTCCAAGCATTTTTTCAGCCAGGTTCACCTATATACTCAGCAAAAGCTGTGCGTTTCCGGTTTGGTCATTTAAACCGTGTCATGAATCCTAGAAGCGATCTGACTGGGGAGTCACACTGGGGATCTGGAAACGATACGTTTATATGGACCTACACTTCTCCAGAATTTCCAATGGCTCAGGAGAATTACTTGCAGAAGTTCGTACTCCCTGAACCTGTTCTTTGCGTAGGAGGCATTTTACAAATTGAGCTGCTTGGCAGGGTACAAAGACAAGAAACAGATGCTTTGTTTTACATATGTGTTTCTCACGTTAAAGTTATCGGACGACCATTATCACCTTCATTTGACATCGAAATCCTCGCACCCTCAGGGGAGTTTCTTTTGAAATGTAATTATCAGGCAAAGACAACTTGTAACCAATTGATTATGCTCGAGAATGAGCCACGCACGATCCTTCCCACGTATTTGGAGAGACGTGTCGTTGAATTGCGACAGATTGTGAACATGCTTCGGGGAAATGTAGTCCAAGGTGAGTATTATGCATGGGGTGAGGAAGAAGATGAATCAGATGAAGATTTTGTTGCCTAAAAGAACAAAAGAAGAGGAAGATGAATGTGAAAAGAACAGCCTTTTTTATTGTGATGAAATAATCTGTACAAGATTGTGGCTCGTGTAGATGAATGTGAAAAGAACAGCTTTTTTATTGCCTCATGTTGGATGTAGTTAAAAAAATGTTAGTAGTAATACCACTATAGTGCAACA

Coding sequence (CDS)

AATTTTACTCTCTCTTTCTCTCATCCTTTTCATGATCATCTATTTCTTAAGCTTATCTTCCTCCCACCAAATCTCTTTCGCTCTGATTCTTCTTCTCCAACGCTTTCTTTTTGGCGACCCTTTTGGTCTCCGATCGAATTGCCAGAAATGGAAGAACGTTTGGATTTCTTGGATTTGCTTGAACCCGACATGTCGAGAAAGATATTGATGTGCTTGGATGATATTTCTGATATCGTTCGTGCGAGTGCCGTCTCACGATGTTGGCAACATTTGGTGATAGAAAATGGTCTGTCAAAGCAGCTCTGCCTTAGATCATTCCCTCCTTTGTCTAGAGTAGCTTCAATCGTTGAAGTGAACGACTCGGAAGCGAATGGACACATAGAAGTAGCATGTAGTAGTTCAAGAGATTCCAAATCCGTGCCGAGGGATCACAAAGTTTATGCTTATTTTGCCCATGCGGCTACATCGTTTCTTATGAGAAGTTGCATTTTAGAGGCACTTATTGCTTCCAGCACTGATAATGAACCCGAGGAAACCATCAACAACACGTTGGAACCAAGAGACGTGGTTGCAAGGAGAGCTTTGTATTGGTCGAGTAAGGGACAATTTAAACCTGATGTGCCTGAGACACTGATATACAGATTAGTCTCCAATTTATGCGTCGTAACTGAAATTGACATACGACCTTTCCAAGCATTTTTTCAGCCAGGTTCACCTATATACTCAGCAAAAGCTGTGCGTTTCCGGTTTGGTCATTTAAACCGTGTCATGAATCCTAGAAGCGATCTGACTGGGGAGTCACACTGGGGATCTGGAAACGATACGTTTATATGGACCTACACTTCTCCAGAATTTCCAATGGCTCAGGAGAATTACTTGCAGAAGTTCGTACTCCCTGAACCTGTTCTTTGCGTAGGAGGCATTTTACAAATTGAGCTGCTTGGCAGGGTACAAAGACAAGAAACAGATGCTTTGTTTTACATATGTGTTTCTCACGTTAAAGTTATCGGACGACCATTATCACCTTCATTTGACATCGAAATCCTCGCACCCTCAGGGGAGTTTCTTTTGAAATGTAATTATCAGGCAAAGACAACTTGTAACCAATTGATTATGCTCGAGAATGAGCCACGCACGATCCTTCCCACGTATTTGGAGAGACGTGTCGTTGAATTGCGACAGATTGTGAACATGCTTCGGGGAAATGTAGTCCAAGGTGAGTATTATGCATGGGGTGAGGAAGAAGATGAATCAGATGAAGATTTTGTTGCCTAA

Protein sequence

NFTLSFSHPFHDHLFLKLIFLPPNLFRSDSSSPTLSFWRPFWSPIELPEMEERLDFLDLLEPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPLSRVASIVEVNDSEANGHIEVACSSSRDSKSVPRDHKVYAYFAHAATSFLMRSCILEALIASSTDNEPEETINNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEIDIRPFQAFFQPGSPIYSAKAVRFRFGHLNRVMNPRSDLTGESHWGSGNDTFIWTYTSPEFPMAQENYLQKFVLPEPVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEILAPSGEFLLKCNYQAKTTCNQLIMLENEPRTILPTYLERRVVELRQIVNMLRGNVVQGEYYAWGEEEDESDEDFVA

Homology

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BLAST of Carg23879 vs. NCBI nr
Match: KAG7028635.1 (F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 865.1 bits (2234), Expect = 2.4e-247
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0


Query: 1   NFTLSFSHPFHDHLFLKLIFLPPNLFRSDSSSPTLSFWRPFWSPIELPEMEERLDFLDLL 60
           NFTLSFSHPFHDHLFLKLIFLPPNLFRSDSSSPTLSFWRPFWSPIELPEMEERLDFLDLL
Sbjct: 1   NFTLSFSHPFHDHLFLKLIFLPPNLFRSDSSSPTLSFWRPFWSPIELPEMEERLDFLDLL 60

Query: 61  EPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPLSRVASIVEVND 120
           EPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPLSRVASIVEVND
Sbjct: 61  EPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPLSRVASIVEVND 120

Query: 121 SEANGHIEVACSSSRDSKSVPRDHKVYAYFAHAATSFLMRSCILEALIASSTDNEPEETI 180
           SEANGHIEVACSSSRDSKSVPRDHKVYAYFAHAATSFLMRSCILEALIASSTDNEPEETI
Sbjct: 121 SEANGHIEVACSSSRDSKSVPRDHKVYAYFAHAATSFLMRSCILEALIASSTDNEPEETI 180

Query: 181 NNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEIDIRPFQAFFQPGSPI 240
           NNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEIDIRPFQAFFQPGSPI
Sbjct: 181 NNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEIDIRPFQAFFQPGSPI 240

Query: 241 YSAKAVRFRFGHLNRVMNPRSDLTGESHWGSGNDTFIWTYTSPEFPMAQENYLQKFVLPE 300
           YSAKAVRFRFGHLNRVMNPRSDLTGESHWGSGNDTFIWTYTSPEFPMAQENYLQKFVLPE
Sbjct: 241 YSAKAVRFRFGHLNRVMNPRSDLTGESHWGSGNDTFIWTYTSPEFPMAQENYLQKFVLPE 300

Query: 301 PVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEILAPSGEFLLKCN 360
           PVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEILAPSGEFLLKCN
Sbjct: 301 PVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEILAPSGEFLLKCN 360

Query: 361 YQAKTTCNQLIMLENEPRTILPTYLERRVVELRQIVNMLRGNVVQGEYYAWGEEEDESDE 420
           YQAKTTCNQLIMLENEPRTILPTYLERRVVELRQIVNMLRGNVVQGEYYAWGEEEDESDE
Sbjct: 361 YQAKTTCNQLIMLENEPRTILPTYLERRVVELRQIVNMLRGNVVQGEYYAWGEEEDESDE 420

Query: 421 DFVA 425
           DFVA
Sbjct: 421 DFVA 424

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BLAST of Carg23879 vs. NCBI nr
Match: KAG6597171.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 829.3 bits (2141), Expect = 1.5e-236
Identity = 407/408 (99.75%), Postives = 408/408 (100.00%), Query Frame = 0


Query: 17  KLIFLPPNLFRSDSSSPTLSFWRPFWSPIELPEMEERLDFLDLLEPDMSRKILMCLDDIS 76
           +LIFLPPNLFRSDSSSPTLSFWRPFWSPIELPEMEERLDFLDLLEPDMSRKILMCLDDIS
Sbjct: 319 ELIFLPPNLFRSDSSSPTLSFWRPFWSPIELPEMEERLDFLDLLEPDMSRKILMCLDDIS 378

Query: 77  DIVRASAVSRCWQHLVIENGLSKQLCLRSFPPLSRVASIVEVNDSEANGHIEVACSSSRD 136
           DIVRASAVSRCWQHLVIENGLSKQLCLRSFPPLSRVASIVEVNDSEANGHIEVACSSSRD
Sbjct: 379 DIVRASAVSRCWQHLVIENGLSKQLCLRSFPPLSRVASIVEVNDSEANGHIEVACSSSRD 438

Query: 137 SKSVPRDHKVYAYFAHAATSFLMRSCILEALIASSTDNEPEETINNTLEPRDVVARRALY 196
           SKSVPRDHKVYAYFAHAATSFLMRSCILEALIASSTDNEPEETINNTLEPRDVVARRALY
Sbjct: 439 SKSVPRDHKVYAYFAHAATSFLMRSCILEALIASSTDNEPEETINNTLEPRDVVARRALY 498

Query: 197 WSSKGQFKPDVPETLIYRLVSNLCVVTEIDIRPFQAFFQPGSPIYSAKAVRFRFGHLNRV 256
           WSSKGQFKPDVPETLIYRLVSNLCVVTEIDIRPFQAFFQPGSPIYSAKAVRFRFGHLNRV
Sbjct: 499 WSSKGQFKPDVPETLIYRLVSNLCVVTEIDIRPFQAFFQPGSPIYSAKAVRFRFGHLNRV 558

Query: 257 MNPRSDLTGESHWGSGNDTFIWTYTSPEFPMAQENYLQKFVLPEPVLCVGGILQIELLGR 316
           MNPRSDLTGESHWGSGNDTFIWTYTSPEFPMAQENYLQKFVLPEPVLCVGGILQIELLGR
Sbjct: 559 MNPRSDLTGESHWGSGNDTFIWTYTSPEFPMAQENYLQKFVLPEPVLCVGGILQIELLGR 618

Query: 317 VQRQETDALFYICVSHVKVIGRPLSPSFDIEILAPSGEFLLKCNYQAKTTCNQLIMLENE 376
           VQRQETDALFYICVSHVKVIGRPLSPSFDIEILAPSGEFLLKCNYQAKTTCNQLIMLENE
Sbjct: 619 VQRQETDALFYICVSHVKVIGRPLSPSFDIEILAPSGEFLLKCNYQAKTTCNQLIMLENE 678

Query: 377 PRTILPTYLERRVVELRQIVNMLRGNVVQGEYYAWGEEEDESDEDFVA 425
           PRTILPTYLERRVVELRQIVNMLRGNVVQGEYYAWGEEEDESDEDFVA
Sbjct: 679 PRTILPTYLERRVVELRQIVNMLRGNVVQGEYYAWGEEEDESDEDFVA 726

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BLAST of Carg23879 vs. NCBI nr
Match: XP_022946399.1 (F-box protein At4g00755-like [Cucurbita moschata])

HSP 1 Score: 760.4 bits (1962), Expect = 8.4e-216
Identity = 374/375 (99.73%), Postives = 375/375 (100.00%), Query Frame = 0


Query: 50  MEERLDFLDLLEPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPL 109
           MEERLDFLDLLEPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPL
Sbjct: 1   MEERLDFLDLLEPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPL 60

Query: 110 SRVASIVEVNDSEANGHIEVACSSSRDSKSVPRDHKVYAYFAHAATSFLMRSCILEALIA 169
           SRVASIVEVNDSEANGHIEVACSSSRDSKSVPRDHKVYAYFAHAATSFLMRSCILEALIA
Sbjct: 61  SRVASIVEVNDSEANGHIEVACSSSRDSKSVPRDHKVYAYFAHAATSFLMRSCILEALIA 120

Query: 170 SSTDNEPEETINNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEIDIRP 229
           SSTDNEPEETINNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEIDIRP
Sbjct: 121 SSTDNEPEETINNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEIDIRP 180

Query: 230 FQAFFQPGSPIYSAKAVRFRFGHLNRVMNPRSDLTGESHWGSGNDTFIWTYTSPEFPMAQ 289
           FQAFFQPGSPIYSAKAVRFRFGHLNRVMNPRSDLTGESHWGSGNDTFIWTYTSPEFPMAQ
Sbjct: 181 FQAFFQPGSPIYSAKAVRFRFGHLNRVMNPRSDLTGESHWGSGNDTFIWTYTSPEFPMAQ 240

Query: 290 ENYLQKFVLPEPVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEIL 349
           ENYLQKF+LPEPVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEIL
Sbjct: 241 ENYLQKFILPEPVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEIL 300

Query: 350 APSGEFLLKCNYQAKTTCNQLIMLENEPRTILPTYLERRVVELRQIVNMLRGNVVQGEYY 409
           APSGEFLLKCNYQAKTTCNQLIMLENEPRTILPTYLERRVVELRQIVNMLRGNVVQGEYY
Sbjct: 301 APSGEFLLKCNYQAKTTCNQLIMLENEPRTILPTYLERRVVELRQIVNMLRGNVVQGEYY 360

Query: 410 AWGEEEDESDEDFVA 425
           AWGEEEDESDEDFVA
Sbjct: 361 AWGEEEDESDEDFVA 375

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BLAST of Carg23879 vs. NCBI nr
Match: XP_023539761.1 (F-box protein At4g00755-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 749.6 bits (1934), Expect = 1.5e-212
Identity = 370/375 (98.67%), Postives = 372/375 (99.20%), Query Frame = 0


Query: 50  MEERLDFLDLLEPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPL 109
           MEERLDFLDLLEPDMSRKILM LDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPL
Sbjct: 1   MEERLDFLDLLEPDMSRKILMYLDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPL 60

Query: 110 SRVASIVEVNDSEANGHIEVACSSSRDSKSVPRDHKVYAYFAHAATSFLMRSCILEALIA 169
           SRVASIVEVNDSEANG IEVACSSSRDSKSVPRDHKVYAYFAHAATSFLMRSCILEALIA
Sbjct: 61  SRVASIVEVNDSEANGRIEVACSSSRDSKSVPRDHKVYAYFAHAATSFLMRSCILEALIA 120

Query: 170 SSTDNEPEETINNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEIDIRP 229
           SSTDNEPEETINNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEIDIRP
Sbjct: 121 SSTDNEPEETINNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEIDIRP 180

Query: 230 FQAFFQPGSPIYSAKAVRFRFGHLNRVMNPRSDLTGESHWGSGNDTFIWTYTSPEFPMAQ 289
           FQAFFQPGSPIYSAKAVRFRFGHLNRVMNPRSDLTGESHWGSGNDTFIWTYTSPEFPMAQ
Sbjct: 181 FQAFFQPGSPIYSAKAVRFRFGHLNRVMNPRSDLTGESHWGSGNDTFIWTYTSPEFPMAQ 240

Query: 290 ENYLQKFVLPEPVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEIL 349
           ENYLQKF+LPEPVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEIL
Sbjct: 241 ENYLQKFILPEPVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEIL 300

Query: 350 APSGEFLLKCNYQAKTTCNQLIMLENEPRTILPTYLERRVVELRQIVNMLRGNVVQGEYY 409
            PSG+FLLKCNYQAKTTCNQLIMLENEPRTILPTYLERRVVELRQIVNMLRGNVVQGEYY
Sbjct: 301 EPSGKFLLKCNYQAKTTCNQLIMLENEPRTILPTYLERRVVELRQIVNMLRGNVVQGEYY 360

Query: 410 AWGEEEDESDEDFVA 425
           AWGEEEDESDEDFVA
Sbjct: 361 AWGEEEDESDEDFVA 375

[Close]

BLAST of Carg23879 vs. NCBI nr
Match: XP_022974091.1 (F-box protein At4g00755-like [Cucurbita maxima])

HSP 1 Score: 741.1 bits (1912), Expect = 5.3e-210
Identity = 364/371 (98.11%), Postives = 368/371 (99.19%), Query Frame = 0


Query: 54  LDFLDLLEPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPLSRVA 113
           +DFLDLLEPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPLSRVA
Sbjct: 1   MDFLDLLEPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPLSRVA 60

Query: 114 SIVEVNDSEANGHIEVACSSSRDSKSVPRDHKVYAYFAHAATSFLMRSCILEALIASSTD 173
           SIVEVNDSEANGHIEVACSSSRDSKSV RDHKVYAYFAHAATSFLMRSCILEALIASSTD
Sbjct: 61  SIVEVNDSEANGHIEVACSSSRDSKSVLRDHKVYAYFAHAATSFLMRSCILEALIASSTD 120

Query: 174 NEPEETINNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEIDIRPFQAF 233
           NEPEETINNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEI+IRPFQAF
Sbjct: 121 NEPEETINNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEINIRPFQAF 180

Query: 234 FQPGSPIYSAKAVRFRFGHLNRVMNPRSDLTGESHWGSGNDTFIWTYTSPEFPMAQENYL 293
           FQPGSPIYSAKAVRFRFGHLNRVMNPRSDL GESHWGSGNDTF+WTYTSPEFPMAQENYL
Sbjct: 181 FQPGSPIYSAKAVRFRFGHLNRVMNPRSDLIGESHWGSGNDTFVWTYTSPEFPMAQENYL 240

Query: 294 QKFVLPEPVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEILAPSG 353
           QKF+LPEPVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEIL PSG
Sbjct: 241 QKFILPEPVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEILEPSG 300

Query: 354 EFLLKCNYQAKTTCNQLIMLENEPRTILPTYLERRVVELRQIVNMLRGNVVQGEYYAWGE 413
           EFLLKCNYQAKTTCNQLIMLENEPRTILPTYLERRVVELRQIVNMLRGNVVQGEYYAWGE
Sbjct: 301 EFLLKCNYQAKTTCNQLIMLENEPRTILPTYLERRVVELRQIVNMLRGNVVQGEYYAWGE 360

Query: 414 EEDESDEDFVA 425
           EEDESDEDFVA
Sbjct: 361 EEDESDEDFVA 371

[Close]

BLAST of Carg23879 vs. ExPASy Swiss-Prot
Match: Q8LG03 (F-box protein At4g00755 OS=Arabidopsis thaliana OX=3702 GN=At4g00755 PE=2 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 2.6e-82
Identity = 168/378 (44.44%), Postives = 226/378 (59.79%), Query Frame = 0


Query: 54  LDFLDLLEPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPLSRVA 113
           +DF++ L+ D S  IL CLDD SDIVRASAVSR W+  V++  LSK LCL+ F  LS V 
Sbjct: 1   MDFVNNLDTDTSLSILSCLDDPSDIVRASAVSRSWRQFVVKYSLSKNLCLKLFHQLSNVD 60

Query: 114 SIVEVNDSEANGHIEVACSSSRDSKSVPRDHKVYAYFAHAATSFLMRSCILEALIASSTD 173
            I+E ++       E   SS  D++ + ++H+ +A  A    S  + SCI +A+ ASSTD
Sbjct: 61  HIIETSNDRNGESSEAGSSSLMDTRLLEKEHRAFALLARGCMSSPIESCIADAIRASSTD 120

Query: 174 NEPEETINNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEIDIRPFQAF 233
           N P E+I NTLE RD + R   YWSS GQ K  VPE+L+Y+L+ +LC++TE+ I PFQA+
Sbjct: 121 NYPVESILNTLEKRDRIGRTPSYWSSTGQHKTTVPESLLYKLIGDLCLITEVSIHPFQAY 180

Query: 234 FQPGSPIYSAKAVRFRFGH---LNRVMNPRSDLTGESHWGSGNDTFIWTYTSPEFPMAQE 293
           FQ G PIYS+  VRFR GH    +   N   D  GE    S    ++WTYTS EF MAQE
Sbjct: 181 FQRGHPIYSSHYVRFRLGHEKDNSPHYNNSQDKKGEPGKSSIESNYVWTYTSQEFSMAQE 240

Query: 294 NYLQKFVLPEPVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEILA 353
           N LQ F LPEPVLC+GG L +E LGRVQ QE D  +YICVSHVKV GR L+ SF +E + 
Sbjct: 241 NRLQSFQLPEPVLCIGGYLLVEFLGRVQTQEMDGQYYICVSHVKVEGRSLAKSFRVENVD 300

Query: 354 PSGEFLLKCNYQAKTTCNQLIMLENEPRTILPTYLE-----------RRVVELRQIVNML 413
            +G+F LK            ++  N+P+ +     E            ++  L Q++N+L
Sbjct: 301 DNGKFGLK------------VLSYNDPKKMEEMDAEAGQDMDAEAGQSQLRNLEQLLNLL 360

Query: 414 RGNVVQGEYYAWGEEEDE 418
             + +    Y W +E D+
Sbjct: 361 HRHPLDVVDYVWPDESDD 366

[Close]

BLAST of Carg23879 vs. ExPASy TrEMBL
Match: A0A6J1G3N6 (F-box protein At4g00755-like OS=Cucurbita moschata OX=3662 GN=LOC111450467 PE=4 SV=1)

HSP 1 Score: 760.4 bits (1962), Expect = 4.1e-216
Identity = 374/375 (99.73%), Postives = 375/375 (100.00%), Query Frame = 0


Query: 50  MEERLDFLDLLEPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPL 109
           MEERLDFLDLLEPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPL
Sbjct: 1   MEERLDFLDLLEPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPL 60

Query: 110 SRVASIVEVNDSEANGHIEVACSSSRDSKSVPRDHKVYAYFAHAATSFLMRSCILEALIA 169
           SRVASIVEVNDSEANGHIEVACSSSRDSKSVPRDHKVYAYFAHAATSFLMRSCILEALIA
Sbjct: 61  SRVASIVEVNDSEANGHIEVACSSSRDSKSVPRDHKVYAYFAHAATSFLMRSCILEALIA 120

Query: 170 SSTDNEPEETINNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEIDIRP 229
           SSTDNEPEETINNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEIDIRP
Sbjct: 121 SSTDNEPEETINNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEIDIRP 180

Query: 230 FQAFFQPGSPIYSAKAVRFRFGHLNRVMNPRSDLTGESHWGSGNDTFIWTYTSPEFPMAQ 289
           FQAFFQPGSPIYSAKAVRFRFGHLNRVMNPRSDLTGESHWGSGNDTFIWTYTSPEFPMAQ
Sbjct: 181 FQAFFQPGSPIYSAKAVRFRFGHLNRVMNPRSDLTGESHWGSGNDTFIWTYTSPEFPMAQ 240

Query: 290 ENYLQKFVLPEPVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEIL 349
           ENYLQKF+LPEPVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEIL
Sbjct: 241 ENYLQKFILPEPVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEIL 300

Query: 350 APSGEFLLKCNYQAKTTCNQLIMLENEPRTILPTYLERRVVELRQIVNMLRGNVVQGEYY 409
           APSGEFLLKCNYQAKTTCNQLIMLENEPRTILPTYLERRVVELRQIVNMLRGNVVQGEYY
Sbjct: 301 APSGEFLLKCNYQAKTTCNQLIMLENEPRTILPTYLERRVVELRQIVNMLRGNVVQGEYY 360

Query: 410 AWGEEEDESDEDFVA 425
           AWGEEEDESDEDFVA
Sbjct: 361 AWGEEEDESDEDFVA 375

[Close]

BLAST of Carg23879 vs. ExPASy TrEMBL
Match: A0A6J1IAF1 (F-box protein At4g00755-like OS=Cucurbita maxima OX=3661 GN=LOC111472703 PE=4 SV=1)

HSP 1 Score: 741.1 bits (1912), Expect = 2.6e-210
Identity = 364/371 (98.11%), Postives = 368/371 (99.19%), Query Frame = 0


Query: 54  LDFLDLLEPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPLSRVA 113
           +DFLDLLEPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPLSRVA
Sbjct: 1   MDFLDLLEPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPLSRVA 60

Query: 114 SIVEVNDSEANGHIEVACSSSRDSKSVPRDHKVYAYFAHAATSFLMRSCILEALIASSTD 173
           SIVEVNDSEANGHIEVACSSSRDSKSV RDHKVYAYFAHAATSFLMRSCILEALIASSTD
Sbjct: 61  SIVEVNDSEANGHIEVACSSSRDSKSVLRDHKVYAYFAHAATSFLMRSCILEALIASSTD 120

Query: 174 NEPEETINNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEIDIRPFQAF 233
           NEPEETINNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEI+IRPFQAF
Sbjct: 121 NEPEETINNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEINIRPFQAF 180

Query: 234 FQPGSPIYSAKAVRFRFGHLNRVMNPRSDLTGESHWGSGNDTFIWTYTSPEFPMAQENYL 293
           FQPGSPIYSAKAVRFRFGHLNRVMNPRSDL GESHWGSGNDTF+WTYTSPEFPMAQENYL
Sbjct: 181 FQPGSPIYSAKAVRFRFGHLNRVMNPRSDLIGESHWGSGNDTFVWTYTSPEFPMAQENYL 240

Query: 294 QKFVLPEPVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEILAPSG 353
           QKF+LPEPVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEIL PSG
Sbjct: 241 QKFILPEPVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEILEPSG 300

Query: 354 EFLLKCNYQAKTTCNQLIMLENEPRTILPTYLERRVVELRQIVNMLRGNVVQGEYYAWGE 413
           EFLLKCNYQAKTTCNQLIMLENEPRTILPTYLERRVVELRQIVNMLRGNVVQGEYYAWGE
Sbjct: 301 EFLLKCNYQAKTTCNQLIMLENEPRTILPTYLERRVVELRQIVNMLRGNVVQGEYYAWGE 360

Query: 414 EEDESDEDFVA 425
           EEDESDEDFVA
Sbjct: 361 EEDESDEDFVA 371

[Close]

BLAST of Carg23879 vs. ExPASy TrEMBL
Match: A0A0A0L4A9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G124240 PE=4 SV=1)

HSP 1 Score: 630.2 bits (1624), Expect = 6.4e-177
Identity = 311/368 (84.51%), Postives = 338/368 (91.85%), Query Frame = 0


Query: 50  MEERLDFLDLLEPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPL 109
           ME RLDFLDLL+PDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLC RSFP L
Sbjct: 1   MEVRLDFLDLLQPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCFRSFPHL 60

Query: 110 SRVASIVEVNDSEANGHIEVACSSSRDSKSVPRDHKVYAYFAHAATSFLMRSCILEALIA 169
           SRVASIVEVN+SE NG+ EVACSSSRDSKS  RDH+VYAY AHA+TSFLMR CI EA+IA
Sbjct: 61  SRVASIVEVNNSEVNGNKEVACSSSRDSKSAQRDHRVYAYLAHASTSFLMRHCISEAIIA 120

Query: 170 SSTDNEPEETINNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEIDIRP 229
           SSTDNEPEE+INNTL+ RD+VARRA YWSSKGQFKPDVPETLIY+LVSNLCVV EI+IRP
Sbjct: 121 SSTDNEPEESINNTLDARDLVARRASYWSSKGQFKPDVPETLIYKLVSNLCVVYEINIRP 180

Query: 230 FQAFFQPGSPIYSAKAVRFRFGHLNRVMNPRSDLTGESHWGSGNDTFIWTYTSPEFPMAQ 289
           FQAFFQ G PIYSAKAVRFRFGHL  V++ RSDL GESH GS  +TFIWTYTSPEFPMAQ
Sbjct: 181 FQAFFQTGLPIYSAKAVRFRFGHLTHVIDHRSDLVGESHCGSAKETFIWTYTSPEFPMAQ 240

Query: 290 ENYLQKFVLPEPVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEIL 349
           E+YLQ+F LPEPVLC+GGILQ+ELLGRVQRQETDALFYICVSHV+VIGRPLSP+FDIEIL
Sbjct: 241 ESYLQRFKLPEPVLCIGGILQVELLGRVQRQETDALFYICVSHVQVIGRPLSPAFDIEIL 300

Query: 350 APSGEFLLKCNYQAKTTCNQLIMLENEPRTILPTYLERRVVELRQIVNMLRGNVVQGEYY 409
            PS +F+LKCN+QAK + NQL MLENEPRTILPTYL RRV+ELRQIVNMLRGNVVQGE Y
Sbjct: 301 EPSWDFILKCNHQAKAS-NQLSMLENEPRTILPTYLGRRVIELRQIVNMLRGNVVQGEDY 360

Query: 410 AWGEEEDE 418
           AWGE+ED+
Sbjct: 361 AWGEDEDD 367

[Close]

BLAST of Carg23879 vs. ExPASy TrEMBL
Match: A0A1S3AV80 (F-box protein At4g00755 OS=Cucumis melo OX=3656 GN=LOC103483307 PE=4 SV=1)

HSP 1 Score: 629.0 bits (1621), Expect = 1.4e-176
Identity = 309/368 (83.97%), Postives = 337/368 (91.58%), Query Frame = 0


Query: 50  MEERLDFLDLLEPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPL 109
           ME RLDFLDLL+PDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLC RSFP L
Sbjct: 1   MEVRLDFLDLLQPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCFRSFPHL 60

Query: 110 SRVASIVEVNDSEANGHIEVACSSSRDSKSVPRDHKVYAYFAHAATSFLMRSCILEALIA 169
           SRVASIVEVN+SE NG+ EVACSSSRDSKS  RDH+VYAY AHA+ SFLMR CI EA+IA
Sbjct: 61  SRVASIVEVNNSEVNGNKEVACSSSRDSKSAQRDHRVYAYLAHASASFLMRHCISEAIIA 120

Query: 170 SSTDNEPEETINNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEIDIRP 229
           SSTDN+PEE+INNTL+ RD+VARRA YWSSKGQFKPDVPETLIY+LVSNLCVV E++IRP
Sbjct: 121 SSTDNDPEESINNTLDARDLVARRASYWSSKGQFKPDVPETLIYKLVSNLCVVYEVNIRP 180

Query: 230 FQAFFQPGSPIYSAKAVRFRFGHLNRVMNPRSDLTGESHWGSGNDTFIWTYTSPEFPMAQ 289
           FQAFFQ G PIYSAKAVRFRFGHL  VM+ RSDL GESH GS  +TFIWTYTSPEFPMAQ
Sbjct: 181 FQAFFQTGLPIYSAKAVRFRFGHLKHVMDLRSDLVGESHCGSAKETFIWTYTSPEFPMAQ 240

Query: 290 ENYLQKFVLPEPVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEIL 349
           ENYLQ+F LPEPVLC+GGILQ+ELLGRVQRQETDALFYICVSHV+VIGRPLSP+FD+EIL
Sbjct: 241 ENYLQRFKLPEPVLCIGGILQVELLGRVQRQETDALFYICVSHVQVIGRPLSPAFDVEIL 300

Query: 350 APSGEFLLKCNYQAKTTCNQLIMLENEPRTILPTYLERRVVELRQIVNMLRGNVVQGEYY 409
            PS +F+LKCN+QAKT+ NQL MLENEPRTILPTYL RRV+ELRQIVNMLRGNVVQGE Y
Sbjct: 301 EPSWDFILKCNHQAKTS-NQLSMLENEPRTILPTYLGRRVIELRQIVNMLRGNVVQGEDY 360

Query: 410 AWGEEEDE 418
           AW E+ED+
Sbjct: 361 AWAEDEDD 367

[Close]

BLAST of Carg23879 vs. ExPASy TrEMBL
Match: A0A6J1D185 (F-box protein At4g00755 OS=Momordica charantia OX=3673 GN=LOC111016345 PE=4 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 9.5e-173
Identity = 303/371 (81.67%), Postives = 329/371 (88.68%), Query Frame = 0


Query: 50  MEERLDFLDLLEPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPL 109
           ME R+DFLDLL+PDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSK LC RSFP L
Sbjct: 1   MEARMDFLDLLQPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKHLCFRSFPQL 60

Query: 110 SRVASIVEVNDSEANGHIEVACSSSRDSKSVPRDHKVYAYFAHAATSFLMRSCILEALIA 169
           S+VASIVE+N+ E  G  EVACSSSRD K + RDH+VYAY AHA TSF +R+CI EA+IA
Sbjct: 61  SQVASIVEINNLEVKGQKEVACSSSRDFKPLERDHRVYAYLAHATTSFFIRNCISEAIIA 120

Query: 170 SSTDNEPEETINNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEIDIRP 229
           SSTDN PEE+I+NTLEPRDVVARRA YWSSKGQFKPDVPETL Y+L+SN CVVTEI+IRP
Sbjct: 121 SSTDNYPEESIDNTLEPRDVVARRASYWSSKGQFKPDVPETLTYKLISNFCVVTEINIRP 180

Query: 230 FQAFFQPGSPIYSAKAVRFRFGHLNRVMNPRSDLTGESHWGSGNDTFIWTYTSPEFPMAQ 289
           FQAFFQPGSPIYSAKAVRFRFGHL   ++PR+DL GESH  S N+TFIWTYTSPEF M Q
Sbjct: 181 FQAFFQPGSPIYSAKAVRFRFGHLKHAIDPRNDLVGESHCKSANETFIWTYTSPEFSMVQ 240

Query: 290 ENYLQKFVLPEPVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEIL 349
           E  LQKF LPEPVLC+GGILQIELLGRVQRQETDALFY+CVSHV+VIGRPLSP+FD+EIL
Sbjct: 241 EYCLQKFKLPEPVLCIGGILQIELLGRVQRQETDALFYMCVSHVQVIGRPLSPAFDVEIL 300

Query: 350 APSGEFLLKCNYQAKTTCNQLIMLENEPRTILPTYLERRVVELRQIVNMLRGNVVQGEYY 409
            PSG+F LKCN QAK  CNQL MLENEPRTILPTYLERRV+ELRQIVNMLRGNV QGE Y
Sbjct: 301 EPSGKFQLKCNRQAK-ACNQLSMLENEPRTILPTYLERRVIELRQIVNMLRGNVGQGEEY 360

Query: 410 AWGEEEDESDE 421
           AW EEEDE DE
Sbjct: 361 AWEEEEDEPDE 370

[Close]

BLAST of Carg23879 vs. TAIR 10
Match: AT4G00755.1 (F-box family protein )

HSP 1 Score: 307.4 bits (786), Expect = 1.8e-83
Identity = 168/378 (44.44%), Postives = 226/378 (59.79%), Query Frame = 0


Query: 54  LDFLDLLEPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPLSRVA 113
           +DF++ L+ D S  IL CLDD SDIVRASAVSR W+  V++  LSK LCL+ F  LS V 
Sbjct: 1   MDFVNNLDTDTSLSILSCLDDPSDIVRASAVSRSWRQFVVKYSLSKNLCLKLFHQLSNVD 60

Query: 114 SIVEVNDSEANGHIEVACSSSRDSKSVPRDHKVYAYFAHAATSFLMRSCILEALIASSTD 173
            I+E ++       E   SS  D++ + ++H+ +A  A    S  + SCI +A+ ASSTD
Sbjct: 61  HIIETSNDRNGESSEAGSSSLMDTRLLEKEHRAFALLARGCMSSPIESCIADAIRASSTD 120

Query: 174 NEPEETINNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEIDIRPFQAF 233
           N P E+I NTLE RD + R   YWSS GQ K  VPE+L+Y+L+ +LC++TE+ I PFQA+
Sbjct: 121 NYPVESILNTLEKRDRIGRTPSYWSSTGQHKTTVPESLLYKLIGDLCLITEVSIHPFQAY 180

Query: 234 FQPGSPIYSAKAVRFRFGH---LNRVMNPRSDLTGESHWGSGNDTFIWTYTSPEFPMAQE 293
           FQ G PIYS+  VRFR GH    +   N   D  GE    S    ++WTYTS EF MAQE
Sbjct: 181 FQRGHPIYSSHYVRFRLGHEKDNSPHYNNSQDKKGEPGKSSIESNYVWTYTSQEFSMAQE 240

Query: 294 NYLQKFVLPEPVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEILA 353
           N LQ F LPEPVLC+GG L +E LGRVQ QE D  +YICVSHVKV GR L+ SF +E + 
Sbjct: 241 NRLQSFQLPEPVLCIGGYLLVEFLGRVQTQEMDGQYYICVSHVKVEGRSLAKSFRVENVD 300

Query: 354 PSGEFLLKCNYQAKTTCNQLIMLENEPRTILPTYLE-----------RRVVELRQIVNML 413
            +G+F LK            ++  N+P+ +     E            ++  L Q++N+L
Sbjct: 301 DNGKFGLK------------VLSYNDPKKMEEMDAEAGQDMDAEAGQSQLRNLEQLLNLL 360

Query: 414 RGNVVQGEYYAWGEEEDE 418
             + +    Y W +E D+
Sbjct: 361 HRHPLDVVDYVWPDESDD 366

[Close]

BLAST of Carg23879 vs. TAIR 10
Match: AT4G00755.2 (F-box family protein )

HSP 1 Score: 307.4 bits (786), Expect = 1.8e-83
Identity = 168/378 (44.44%), Postives = 226/378 (59.79%), Query Frame = 0


Query: 54  LDFLDLLEPDMSRKILMCLDDISDIVRASAVSRCWQHLVIENGLSKQLCLRSFPPLSRVA 113
           +DF++ L+ D S  IL CLDD SDIVRASAVSR W+  V++  LSK LCL+ F  LS V 
Sbjct: 1   MDFVNNLDTDTSLSILSCLDDPSDIVRASAVSRSWRQFVVKYSLSKNLCLKLFHQLSNVD 60

Query: 114 SIVEVNDSEANGHIEVACSSSRDSKSVPRDHKVYAYFAHAATSFLMRSCILEALIASSTD 173
            I+E ++       E   SS  D++ + ++H+ +A  A    S  + SCI +A+ ASSTD
Sbjct: 61  HIIETSNDRNGESSEAGSSSLMDTRLLEKEHRAFALLARGCMSSPIESCIADAIRASSTD 120

Query: 174 NEPEETINNTLEPRDVVARRALYWSSKGQFKPDVPETLIYRLVSNLCVVTEIDIRPFQAF 233
           N P E+I NTLE RD + R   YWSS GQ K  VPE+L+Y+L+ +LC++TE+ I PFQA+
Sbjct: 121 NYPVESILNTLEKRDRIGRTPSYWSSTGQHKTTVPESLLYKLIGDLCLITEVSIHPFQAY 180

Query: 234 FQPGSPIYSAKAVRFRFGH---LNRVMNPRSDLTGESHWGSGNDTFIWTYTSPEFPMAQE 293
           FQ G PIYS+  VRFR GH    +   N   D  GE    S    ++WTYTS EF MAQE
Sbjct: 181 FQRGHPIYSSHYVRFRLGHEKDNSPHYNNSQDKKGEPGKSSIESNYVWTYTSQEFSMAQE 240

Query: 294 NYLQKFVLPEPVLCVGGILQIELLGRVQRQETDALFYICVSHVKVIGRPLSPSFDIEILA 353
           N LQ F LPEPVLC+GG L +E LGRVQ QE D  +YICVSHVKV GR L+ SF +E + 
Sbjct: 241 NRLQSFQLPEPVLCIGGYLLVEFLGRVQTQEMDGQYYICVSHVKVEGRSLAKSFRVENVD 300

Query: 354 PSGEFLLKCNYQAKTTCNQLIMLENEPRTILPTYLE-----------RRVVELRQIVNML 413
            +G+F LK            ++  N+P+ +     E            ++  L Q++N+L
Sbjct: 301 DNGKFGLK------------VLSYNDPKKMEEMDAEAGQDMDAEAGQSQLRNLEQLLNLL 360

Query: 414 RGNVVQGEYYAWGEEEDE 418
             + +    Y W +E D+
Sbjct: 361 HRHPLDVVDYVWPDESDD 366

The following BLAST results are available for this feature:

BLAST of Carg23879 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7028635.1	2.4e-247	100.00	F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6597171.1	1.5e-236	99.75	F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022946399.1	8.4e-216	99.73	F-box protein At4g00755-like [Cucurbita moschata]	[more]
XP_023539761.1	1.5e-212	98.67	F-box protein At4g00755-like [Cucurbita pepo subsp. pepo]	[more]
XP_022974091.1	5.3e-210	98.11	F-box protein At4g00755-like [Cucurbita maxima]	[more]

BLAST of Carg23879 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LG03	2.6e-82	44.44	F-box protein At4g00755 OS=Arabidopsis thaliana OX=3702 GN=At4g00755 PE=2 SV=1	[more]

BLAST of Carg23879 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G3N6	4.1e-216	99.73	F-box protein At4g00755-like OS=Cucurbita moschata OX=3662 GN=LOC111450467 PE=4 ...	[more]
A0A6J1IAF1	2.6e-210	98.11	F-box protein At4g00755-like OS=Cucurbita maxima OX=3661 GN=LOC111472703 PE=4 SV...	[more]
A0A0A0L4A9	6.4e-177	84.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G124240 PE=4 SV=1	[more]
A0A1S3AV80	1.4e-176	83.97	F-box protein At4g00755 OS=Cucumis melo OX=3656 GN=LOC103483307 PE=4 SV=1	[more]
A0A6J1D185	9.5e-173	81.67	F-box protein At4g00755 OS=Momordica charantia OX=3673 GN=LOC111016345 PE=4 SV=1	[more]

BLAST of Carg23879 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00755.1	1.8e-83	44.44	F-box family protein	[more]
AT4G00755.2	1.8e-83	44.44	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1280.50		coord: 46..150 e-value: 1.8E-6 score: 29.8
None	No IPR available	PANTHER	PTHR39741	F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 50..421
None	No IPR available	PANTHER	PTHR39741:SF14	CYCLIN-LIKE F-BOX PROTEIN	coord: 50..421
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 49..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23879-RA	Carg23879-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding