Carg23835 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23835
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Proliferating cell nuclear antigen
Location	Carg_Chr02: 4279261 .. 4280511 (+)
RNA-Seq Expression	Carg23835
Synteny	Carg23835

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGAACTTCATCTTGTTCAGAATTCGCTCCTCAAGAAGGTCTTGGAGTCGATCAAAGATTTTGTGACCGATGCAAACTTCCATTATTCGGCCACTGGATGCTCGCTTCAGGCCATGGATTCGAGCCATGTTGCCCTGGTGGTTCTTCTCCTTCGAGCGGAGGCCTTTGAACTATATCGCTGCGACAGAAACATTTCCGTGGGAATGAACTTGAACAACATGTCGAAAATGCTCGAGTGTGCCGGCAATGATGATGCCATTAGAATCAAGGCTGATGACGGCAATGATACTATCACTTTCGTGTTTGAAAGCCCCAGTATGAGCTCTTTCTGTCTTTCTTTAGTTGTTTCAATCATTTTAGAACCTCGTTCTCGTAGTTATGTAGTTTTTAGATTATCGGATTATTTTTCTGTTGTCTTTTGAACTTCTTGATCTGTTAGATTTAAGTAATCGTAGTTGCATCTCAAGGTTCATTTCGTCTCTAAACATAGTATGATTCTTAGGTCAGTTTCAATGATTGTTAACTAGAAGTGCATCGGACTCTGGATCTGAAGCGAGTATCTGATGCTTTCTTTCTTACCTTTTGTCCGTCCCATCCATGGTATCAGCCCAACGCAAGGTTTCCAATTTTGAGATGAGATTGATGGACATCGACAGCGAGCTACTTGGAATTCCAGATTTAGAGCATCATGCTATTGTTAAAATGCCTTCTGTTGAGTTCGCTAGAATTTGCAAAGATCTCAGCAACATTGGTGATACTGGTACATCCTAATACCTTTACCTTTCAGTGTTTTATCTGATTTAGCTGACAAATTCTTGGATTATGAAAAAATTAATTGACTTCACCGATTCTTGCAGTTATAATCTCTGTGACGAGGGAAGATGTCACGTTCTCAACAATAGCTGATATAGGATCTGCAAACATTGTTTGCAGCCAGAACGCTGCCGTAGCCAAGGTCTGCATGCGCCTTAACACTTCAGGGATCTGATTTCATTAACTTAATTCTTTTTTGAATACTGAATTTTGATCTGTCTCAATTTTGGGGATTGCAGCCAGAAGAAGCAACAGTTATAGAGATAAACGAGCCAGTTTCTTCGACATTTTCTTTGAGGTATATGAATTTATTCACCAAGGCTACACCCCTATCTAATACAGTTACCATCAGCCTGTCTTCTGAGCTACCTGCCATTGTTGAGTACAAAATAGCAGAGATGGGACATGTTAGATTTTACATGGATCCCAGTTAG

mRNA sequence

ATGTTGGAACTTCATCTTGTTCAGAATTCGCTCCTCAAGAAGGTCTTGGAGTCGATCAAAGATTTTGTGACCGATGCAAACTTCCATTATTCGGCCACTGGATGCTCGCTTCAGGCCATGGATTCGAGCCATGTTGCCCTGGTGGTTCTTCTCCTTCGAGCGGAGGCCTTTGAACTATATCGCTGCGACAGAAACATTTCCGTGGGAATGAACTTGAACAACATGTCGAAAATGCTCGAGTGTGCCGGCAATGATGATGCCATTAGAATCAAGGCTGATGACGGCAATGATACTATCACTTTCGTGTTTGAAAGCCCCACCCAACGCAAGGTTTCCAATTTTGAGATGAGATTGATGGACATCGACAGCGAGCTACTTGGAATTCCAGATTTAGAGCATCATGCTATTGTTAAAATGCCTTCTGTTGAGTTCGCTAGAATTTGCAAAGATCTCAGCAACATTGGTGATACTGTTATAATCTCTGTGACGAGGGAAGATGTCACGTTCTCAACAATAGCTGATATAGGATCTGCAAACATTGTTTGCAGCCAGAACGCTGCCGTAGCCAAGCCAGAAGAAGCAACAGTTATAGAGATAAACGAGCCAGTTTCTTCGACATTTTCTTTGAGGTATATGAATTTATTCACCAAGGCTACACCCCTATCTAATACAGTTACCATCAGCCTGTCTTCTGAGCTACCTGCCATTGTTGAGTACAAAATAGCAGAGATGGGACATGTTAGATTTTACATGGATCCCAGTTAG

Coding sequence (CDS)

ATGTTGGAACTTCATCTTGTTCAGAATTCGCTCCTCAAGAAGGTCTTGGAGTCGATCAAAGATTTTGTGACCGATGCAAACTTCCATTATTCGGCCACTGGATGCTCGCTTCAGGCCATGGATTCGAGCCATGTTGCCCTGGTGGTTCTTCTCCTTCGAGCGGAGGCCTTTGAACTATATCGCTGCGACAGAAACATTTCCGTGGGAATGAACTTGAACAACATGTCGAAAATGCTCGAGTGTGCCGGCAATGATGATGCCATTAGAATCAAGGCTGATGACGGCAATGATACTATCACTTTCGTGTTTGAAAGCCCCACCCAACGCAAGGTTTCCAATTTTGAGATGAGATTGATGGACATCGACAGCGAGCTACTTGGAATTCCAGATTTAGAGCATCATGCTATTGTTAAAATGCCTTCTGTTGAGTTCGCTAGAATTTGCAAAGATCTCAGCAACATTGGTGATACTGTTATAATCTCTGTGACGAGGGAAGATGTCACGTTCTCAACAATAGCTGATATAGGATCTGCAAACATTGTTTGCAGCCAGAACGCTGCCGTAGCCAAGCCAGAAGAAGCAACAGTTATAGAGATAAACGAGCCAGTTTCTTCGACATTTTCTTTGAGGTATATGAATTTATTCACCAAGGCTACACCCCTATCTAATACAGTTACCATCAGCCTGTCTTCTGAGCTACCTGCCATTGTTGAGTACAAAATAGCAGAGATGGGACATGTTAGATTTTACATGGATCCCAGTTAG

Protein sequence

MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELYRCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMDIDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIADIGSANIVCSQNAAVAKPEEATVIEINEPVSSTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYKIAEMGHVRFYMDPS

Homology

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BLAST of Carg23835 vs. NCBI nr
Match: KAG6605431.1 (Proliferating cell nuclear antigen, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035380.1 Proliferating cell nuclear antigen, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 491.1 bits (1263), Expect = 5.7e-135
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY 60
           MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY
Sbjct: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY 60

Query: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD
Sbjct: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIADIGSANI 180
           IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIADIGSANI
Sbjct: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIADIGSANI 180

Query: 181 VCSQNAAVAKPEEATVIEINEPVSSTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240
           VCSQNAAVAKPEEATVIEINEPVSSTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK
Sbjct: 181 VCSQNAAVAKPEEATVIEINEPVSSTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240

Query: 241 IAEMGHVRFYMDPS 255
           IAEMGHVRFYMDPS
Sbjct: 241 IAEMGHVRFYMDPS 254

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BLAST of Carg23835 vs. NCBI nr
Match: XP_022947842.1 (proliferating cell nuclear antigen-like [Cucurbita moschata])

HSP 1 Score: 484.2 bits (1245), Expect = 7.0e-133
Identity = 249/254 (98.03%), Postives = 252/254 (99.21%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY 60
           MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY
Sbjct: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY 60

Query: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD
Sbjct: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIADIGSANI 180
           IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTI DIGSANI
Sbjct: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIDDIGSANI 180

Query: 181 VCSQNAAVAKPEEATVIEINEPVSSTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240
           VCSQNAAVAKPEEATVIE+NEPVS TFSLRYMNLFTKATPLSNTVTISL+SELPA+VEYK
Sbjct: 181 VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK 240

Query: 241 IAEMGHVRFYMDPS 255
           IAEMGHVRFYMDPS
Sbjct: 241 IAEMGHVRFYMDPS 254

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BLAST of Carg23835 vs. NCBI nr
Match: XP_023532278.1 (proliferating cell nuclear antigen-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 481.9 bits (1239), Expect = 3.5e-132
Identity = 247/254 (97.24%), Postives = 251/254 (98.82%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY 60
           MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHV LVVLLLRAEAFELY
Sbjct: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVTLVVLLLRAEAFELY 60

Query: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRNISVGMNLNNMSKML+CAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD
Sbjct: 61  RCDRNISVGMNLNNMSKMLKCAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIADIGSANI 180
           IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTI DIGSANI
Sbjct: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIGDIGSANI 180

Query: 181 VCSQNAAVAKPEEATVIEINEPVSSTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240
           VCSQNAAVAKPEEATVIE+NEPVS TFSLRYMNLFTKATPLSNTVTISL+SELPA+VEYK
Sbjct: 181 VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK 240

Query: 241 IAEMGHVRFYMDPS 255
           IAEMGHVRFYMDPS
Sbjct: 241 IAEMGHVRFYMDPS 254

[Close]

BLAST of Carg23835 vs. NCBI nr
Match: XP_023007566.1 (proliferating cell nuclear antigen-like [Cucurbita maxima])

HSP 1 Score: 481.5 bits (1238), Expect = 4.5e-132
Identity = 248/254 (97.64%), Postives = 251/254 (98.82%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY 60
           MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSH+ LVVLLLRAEAFELY
Sbjct: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHITLVVLLLRAEAFELY 60

Query: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD
Sbjct: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIADIGSANI 180
           IDSE LGIPDLEHHAIVKMPSVEFARICKDLS+IGDTVIISVTREDVTFSTI+DIGSANI
Sbjct: 121 IDSEQLGIPDLEHHAIVKMPSVEFARICKDLSSIGDTVIISVTREDVTFSTISDIGSANI 180

Query: 181 VCSQNAAVAKPEEATVIEINEPVSSTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240
           VCSQNAAVAKPEEATVIEINEPVS TFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK
Sbjct: 181 VCSQNAAVAKPEEATVIEINEPVSLTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240

Query: 241 IAEMGHVRFYMDPS 255
           IAEMGHVRFYMDPS
Sbjct: 241 IAEMGHVRFYMDPS 254

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BLAST of Carg23835 vs. NCBI nr
Match: XP_022148313.1 (proliferating cell nuclear antigen [Momordica charantia])

HSP 1 Score: 402.9 bits (1034), Expect = 2.0e-108
Identity = 208/253 (82.21%), Postives = 226/253 (89.33%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY 60
           MLEL LVQ SLLKKVLESIKD V DANF  SATG SLQAMDSSHVALV LLLRAE FE Y
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRAEGFEHY 60

Query: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRNIS+GMNLNNMSKML+CAGNDD I IKADDG+DT+TF+FESPTQ K+S+FEM+LMD
Sbjct: 61  RCDRNISMGMNLNNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIADIGSANI 180
           IDSE LGIPD E+HAIV+MPSVEFARICKDLS+IGDTV+ISVT+E V FST  DIGSANI
Sbjct: 121 IDSEHLGIPDAEYHAIVRMPSVEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGSANI 180

Query: 181 VCSQNAAVAKPEEATVIEINEPVSSTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240
           VC QN  V KPEEATVIE+NEPVS TF+LRYMN FTKATPLSNTVTISLSSELP +VEYK
Sbjct: 181 VCRQNTTVDKPEEATVIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSELPVVVEYK 240

Query: 241 IAEMGHVRFYMDP 254
           IAEMG+VRFY+ P
Sbjct: 241 IAEMGYVRFYLAP 253

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BLAST of Carg23835 vs. ExPASy Swiss-Prot
Match: O82797 (Proliferating cell nuclear antigen OS=Nicotiana tabacum OX=4097 GN=PCNA PE=2 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 5.2e-107
Identity = 197/253 (77.87%), Postives = 224/253 (88.54%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY 60
           MLEL LVQ SLLKKVLESIKD V DANF  SATG SLQAMDSSHVALV LLLR+E FE Y
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRNIS+GMNL NM+KML+CAGNDD I +KADDG+DT+TF+FESPTQ K+++FEM+LMD
Sbjct: 61  RCDRNISMGMNLANMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIADIGSANI 180
           IDSE LGIP+ E+HAIV+MPS EF+RICKDLS+IGDTV+ISVT+E V FST  DIG+ANI
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFSRICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI 180

Query: 181 VCSQNAAVAKPEEATVIEINEPVSSTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240
           VC QN  V KPEEATVIE+NEPVS TF+LRY+N FTKATPLSNTVTISLSSELP +VEYK
Sbjct: 181 VCRQNTTVDKPEEATVIEMNEPVSLTFALRYLNSFTKATPLSNTVTISLSSELPVVVEYK 240

Query: 241 IAEMGHVRFYMDP 254
           IAEMG++RFY+ P
Sbjct: 241 IAEMGYIRFYLAP 253

[Close]

BLAST of Carg23835 vs. ExPASy Swiss-Prot
Match: P24314 (Proliferating cell nuclear antigen OS=Catharanthus roseus OX=4058 PE=2 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 1.2e-106
Identity = 195/253 (77.08%), Postives = 224/253 (88.54%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY 60
           MLEL LVQ SLLKKVLES+KD VTDANF  SA+G SLQAMDSSHVALV LLLR+E FE Y
Sbjct: 1   MLELRLVQGSLLKKVLESLKDLVTDANFDCSASGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRN S+GMNLNNM+KML+CAGNDD I +KADDG+DT+TF+FESPTQ K+S+FEM+LMD
Sbjct: 61  RCDRNPSMGMNLNNMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKISDFEMKLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIADIGSANI 180
           IDSE LGIP+ E+HAIV+MPS EFARICKDLS+IGDTV+ISVT+E V FST  DIG+ANI
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI 180

Query: 181 VCSQNAAVAKPEEATVIEINEPVSSTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240
           VC QN  V KP+EAT+IE+NEPVS TF+LRY+N FTKATPLSN VTISLSSELP +VEYK
Sbjct: 181 VCRQNTTVDKPDEATIIEMNEPVSLTFALRYLNSFTKATPLSNNVTISLSSELPVVVEYK 240

Query: 241 IAEMGHVRFYMDP 254
           IAEMG++RFY+ P
Sbjct: 241 IAEMGYIRFYLAP 253

[Close]

BLAST of Carg23835 vs. ExPASy Swiss-Prot
Match: Q00268 (Proliferating cell nuclear antigen OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 3.4e-106
Identity = 195/253 (77.08%), Postives = 224/253 (88.54%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY 60
           MLEL LVQ SLLKKV++SIKD V DANF  SATG SLQAMDSSHVALV +LLR+E FE Y
Sbjct: 1   MLELRLVQGSLLKKVMDSIKDLVNDANFDCSATGFSLQAMDSSHVALVAVLLRSEGFEHY 60

Query: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRNIS+GMNL NM+KML+CAGNDD I IKADDG+DT+TF+FESPTQ K+++FEM+LMD
Sbjct: 61  RCDRNISMGMNLGNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIADIGSANI 180
           IDSE LGIP+ E+HAIV+MPS EFARICKDLS+IGDTV+ISVT+E V FST  DIG+ANI
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI 180

Query: 181 VCSQNAAVAKPEEATVIEINEPVSSTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240
           VC QN  V KPEEATVIE+NEPVS TF+LRYMN FTKA+PLS+TVTISLSSELP +VEYK
Sbjct: 181 VCRQNTTVDKPEEATVIEMNEPVSLTFALRYMNSFTKASPLSSTVTISLSSELPVVVEYK 240

Query: 241 IAEMGHVRFYMDP 254
           IAEMG++RFY+ P
Sbjct: 241 IAEMGYIRFYLAP 253

[Close]

BLAST of Carg23835 vs. ExPASy Swiss-Prot
Match: O82134 (Proliferating cell nuclear antigen OS=Pisum sativum OX=3888 GN=PCNA PE=2 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 2.2e-105
Identity = 194/253 (76.68%), Postives = 224/253 (88.54%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY 60
           MLEL LVQ SLLKKVLESIK+ V DANF  S+TG SLQAMDSSHVALV LLLR+E FE Y
Sbjct: 1   MLELRLVQGSLLKKVLESIKELVNDANFDCSSTGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRN+S+GMNLNNM+KML+CAGNDD I IKADDG+DT+TF+FESPTQ K+S+FEM+LMD
Sbjct: 61  RCDRNLSMGMNLNNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIADIGSANI 180
           IDSE LGIP+ E+HAIV+MPS EFARICKDLS+IGDTV+I+V++E V FST  DIGSANI
Sbjct: 121 IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVIAVSKEGVKFSTKGDIGSANI 180

Query: 181 VCSQNAAVAKPEEATVIEINEPVSSTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240
           VC QN  V KPEEATVIE+NEPV+  F+LRYMN FTKATPLS++VTISLS+ELP +VEYK
Sbjct: 181 VCRQNTTVDKPEEATVIEMNEPVALQFALRYMNSFTKATPLSSSVTISLSNELPVVVEYK 240

Query: 241 IAEMGHVRFYMDP 254
           IAEMG+VRFY+ P
Sbjct: 241 IAEMGYVRFYLAP 253

[Close]

BLAST of Carg23835 vs. ExPASy Swiss-Prot
Match: Q9MAY3 (Proliferating cell nuclear antigen OS=Populus nigra OX=3691 GN=PCNA PE=2 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 4.1e-104
Identity = 191/253 (75.49%), Postives = 221/253 (87.35%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY 60
           MLEL LVQ SLLKKVLESIKD V DANF +S++G SLQ+MDSSHVALV LLL++E FE Y
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDFSSSGFSLQSMDSSHVALVALLLKSEGFEHY 60

Query: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRN S+GMNL NMSKML+CAGNDD I IK DDG+DT+TF+FESPTQ K+++FEM+LMD
Sbjct: 61  RCDRNTSMGMNLGNMSKMLKCAGNDDIITIKGDDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIADIGSANI 180
           IDSE LGIP+ E+HAIVKMPS EFARICKDL++IGDTV+ISVT+E V FST  DIG+ANI
Sbjct: 121 IDSEHLGIPEAEYHAIVKMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANI 180

Query: 181 VCSQNAAVAKPEEATVIEINEPVSSTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240
           V  QN  V KPE+ATVIE+NEPVS TF+LRYMN FTKATPLSNTVTIS+S +LP +VEYK
Sbjct: 181 VLRQNTTVDKPEDATVIEMNEPVSMTFALRYMNSFTKATPLSNTVTISMSPDLPVVVEYK 240

Query: 241 IAEMGHVRFYMDP 254
           IAEMG+VRFY+ P
Sbjct: 241 IAEMGYVRFYLAP 253

[Close]

BLAST of Carg23835 vs. ExPASy TrEMBL
Match: A0A6J1G7J1 (Proliferating cell nuclear antigen OS=Cucurbita moschata OX=3662 GN=LOC111451602 PE=3 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 3.4e-133
Identity = 249/254 (98.03%), Postives = 252/254 (99.21%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY 60
           MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY
Sbjct: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY 60

Query: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD
Sbjct: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIADIGSANI 180
           IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTI DIGSANI
Sbjct: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIDDIGSANI 180

Query: 181 VCSQNAAVAKPEEATVIEINEPVSSTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240
           VCSQNAAVAKPEEATVIE+NEPVS TFSLRYMNLFTKATPLSNTVTISL+SELPA+VEYK
Sbjct: 181 VCSQNAAVAKPEEATVIELNEPVSLTFSLRYMNLFTKATPLSNTVTISLASELPAVVEYK 240

Query: 241 IAEMGHVRFYMDPS 255
           IAEMGHVRFYMDPS
Sbjct: 241 IAEMGHVRFYMDPS 254

[Close]

BLAST of Carg23835 vs. ExPASy TrEMBL
Match: A0A6J1L0X1 (Proliferating cell nuclear antigen OS=Cucurbita maxima OX=3661 GN=LOC111500022 PE=3 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.2e-132
Identity = 248/254 (97.64%), Postives = 251/254 (98.82%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY 60
           MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSH+ LVVLLLRAEAFELY
Sbjct: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHITLVVLLLRAEAFELY 60

Query: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD
Sbjct: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIADIGSANI 180
           IDSE LGIPDLEHHAIVKMPSVEFARICKDLS+IGDTVIISVTREDVTFSTI+DIGSANI
Sbjct: 121 IDSEQLGIPDLEHHAIVKMPSVEFARICKDLSSIGDTVIISVTREDVTFSTISDIGSANI 180

Query: 181 VCSQNAAVAKPEEATVIEINEPVSSTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240
           VCSQNAAVAKPEEATVIEINEPVS TFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK
Sbjct: 181 VCSQNAAVAKPEEATVIEINEPVSLTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240

Query: 241 IAEMGHVRFYMDPS 255
           IAEMGHVRFYMDPS
Sbjct: 241 IAEMGHVRFYMDPS 254

[Close]

BLAST of Carg23835 vs. ExPASy TrEMBL
Match: A0A6J1D3S3 (Proliferating cell nuclear antigen OS=Momordica charantia OX=3673 GN=LOC111016996 PE=3 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 9.9e-109
Identity = 208/253 (82.21%), Postives = 226/253 (89.33%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY 60
           MLEL LVQ SLLKKVLESIKD V DANF  SATG SLQAMDSSHVALV LLLRAE FE Y
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRAEGFEHY 60

Query: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRNIS+GMNLNNMSKML+CAGNDD I IKADDG+DT+TF+FESPTQ K+S+FEM+LMD
Sbjct: 61  RCDRNISMGMNLNNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIADIGSANI 180
           IDSE LGIPD E+HAIV+MPSVEFARICKDLS+IGDTV+ISVT+E V FST  DIGSANI
Sbjct: 121 IDSEHLGIPDAEYHAIVRMPSVEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGSANI 180

Query: 181 VCSQNAAVAKPEEATVIEINEPVSSTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240
           VC QN  V KPEEATVIE+NEPVS TF+LRYMN FTKATPLSNTVTISLSSELP +VEYK
Sbjct: 181 VCRQNTTVDKPEEATVIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSELPVVVEYK 240

Query: 241 IAEMGHVRFYMDP 254
           IAEMG+VRFY+ P
Sbjct: 241 IAEMGYVRFYLAP 253

[Close]

BLAST of Carg23835 vs. ExPASy TrEMBL
Match: A0A5A7V7Z1 (Proliferating cell nuclear antigen OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00380 PE=3 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.2e-108
Identity = 207/253 (81.82%), Postives = 226/253 (89.33%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY 60
           MLEL LVQ SLLKKVLESIKD V DANF  SATG SLQAMDSSHVALV LLLRAE FE Y
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRAEGFEHY 60

Query: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRNIS+GMNLNNMSKML+CAGNDD I IKADDG+DT+TF+FESPTQ K+S+FEM+LMD
Sbjct: 61  RCDRNISMGMNLNNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIADIGSANI 180
           IDSE LGIPD E+HAIV+MPSVEFARICKDLS+IGDTV+ISVT+E V FST  DIGSANI
Sbjct: 121 IDSEHLGIPDAEYHAIVRMPSVEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGSANI 180

Query: 181 VCSQNAAVAKPEEATVIEINEPVSSTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240
           VC QN  V KPEEATVIE+NEPVS TF+LRYMN FTKATPLSNTVTISLSS+LP +VEYK
Sbjct: 181 VCRQNTTVDKPEEATVIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYK 240

Query: 241 IAEMGHVRFYMDP 254
           IAEMG+VRFY+ P
Sbjct: 241 IAEMGYVRFYLAP 253

[Close]

BLAST of Carg23835 vs. ExPASy TrEMBL
Match: A0A0A0KE56 (Proliferating cell nuclear antigen OS=Cucumis sativus OX=3659 GN=Csa_6G188070 PE=3 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.2e-108
Identity = 207/253 (81.82%), Postives = 226/253 (89.33%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY 60
           MLEL LVQ SLLKKVLESIKD V DANF  SATG SLQAMDSSHVALV LLLRAE FE Y
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSATGFSLQAMDSSHVALVALLLRAEGFEHY 60

Query: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRNIS+GMNLNNMSKML+CAGNDD I IKADDG+DT+TF+FESPTQ K+S+FEM+LMD
Sbjct: 61  RCDRNISMGMNLNNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIADIGSANI 180
           IDSE LGIPD E+HAIV+MPSVEFARICKDLS+IGDTV+ISVT+E V FST  DIGSANI
Sbjct: 121 IDSEHLGIPDAEYHAIVRMPSVEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGSANI 180

Query: 181 VCSQNAAVAKPEEATVIEINEPVSSTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240
           VC QN  V KPEEATVIE+NEPVS TF+LRYMN FTKATPLSNTVTISLSS+LP +VEYK
Sbjct: 181 VCRQNTTVDKPEEATVIEMNEPVSLTFALRYMNSFTKATPLSNTVTISLSSDLPVVVEYK 240

Query: 241 IAEMGHVRFYMDP 254
           IAEMG+VRFY+ P
Sbjct: 241 IAEMGYVRFYLAP 253

[Close]

BLAST of Carg23835 vs. TAIR 10
Match: AT2G29570.1 (proliferating cell nuclear antigen 2 )

HSP 1 Score: 375.2 bits (962), Expect = 4.2e-104
Identity = 189/253 (74.70%), Postives = 220/253 (86.96%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY 60
           MLEL LVQ SLLKKVLE++KD V DANF  S TG SLQAMDSSHVALV LLLR+E FE Y
Sbjct: 1   MLELRLVQGSLLKKVLEAVKDLVNDANFDCSTTGFSLQAMDSSHVALVSLLLRSEGFEHY 60

Query: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRN+S+GMNL NMSKML+CAGNDD I IKADDG+DT+TF+FESPTQ K+++FEM+LMD
Sbjct: 61  RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIADIGSANI 180
           IDSE LGIPD E+H+IV+MPS EF+RICKDLS+IGDTV+ISVT+E V FST  DIG+ANI
Sbjct: 121 IDSEHLGIPDAEYHSIVRMPSGEFSRICKDLSSIGDTVVISVTKEGVKFSTAGDIGTANI 180

Query: 181 VCSQNAAVAKPEEATVIEINEPVSSTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240
           V  QN  V KPE+A VIE+NEPVS +F+LRYMN FTKATPLS TVTISLSSELP +VEYK
Sbjct: 181 VLRQNTTVDKPEDAIVIEMNEPVSLSFALRYMNSFTKATPLSETVTISLSSELPVVVEYK 240

Query: 241 IAEMGHVRFYMDP 254
           +AEMG++R+Y+ P
Sbjct: 241 VAEMGYIRYYLAP 253

[Close]

BLAST of Carg23835 vs. TAIR 10
Match: AT1G07370.1 (proliferating cellular nuclear antigen 1 )

HSP 1 Score: 374.8 bits (961), Expect = 5.5e-104
Identity = 190/253 (75.10%), Postives = 220/253 (86.96%), Query Frame = 0


Query: 1   MLELHLVQNSLLKKVLESIKDFVTDANFHYSATGCSLQAMDSSHVALVVLLLRAEAFELY 60
           MLEL LVQ SLLKKVLESIKD V DANF  S+TG SLQAMDSSHVALV LLLR+E FE Y
Sbjct: 1   MLELRLVQGSLLKKVLESIKDLVNDANFDCSSTGFSLQAMDSSHVALVSLLLRSEGFEHY 60

Query: 61  RCDRNISVGMNLNNMSKMLECAGNDDAIRIKADDGNDTITFVFESPTQRKVSNFEMRLMD 120
           RCDRN+S+GMNL NMSKML+CAGNDD I IKADDG DT+TF+FESPTQ K+++FEM+LMD
Sbjct: 61  RCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGGDTVTFMFESPTQDKIADFEMKLMD 120

Query: 121 IDSELLGIPDLEHHAIVKMPSVEFARICKDLSNIGDTVIISVTREDVTFSTIADIGSANI 180
           IDSE LGIPD E+H+IV+MPS EF+RICKDLS+IGDTV+ISVT+E V FST  DIG+ANI
Sbjct: 121 IDSEHLGIPDAEYHSIVRMPSNEFSRICKDLSSIGDTVVISVTKEGVKFSTAGDIGTANI 180

Query: 181 VCSQNAAVAKPEEATVIEINEPVSSTFSLRYMNLFTKATPLSNTVTISLSSELPAIVEYK 240
           V  QN  V KPE+A VIE+ EPVS +F+LRYMN FTKATPLS+TVTISLSSELP +VEYK
Sbjct: 181 VLRQNTTVDKPEDAIVIEMKEPVSLSFALRYMNSFTKATPLSDTVTISLSSELPVVVEYK 240

Query: 241 IAEMGHVRFYMDP 254
           +AEMG++R+Y+ P
Sbjct: 241 VAEMGYIRYYLAP 253

The following BLAST results are available for this feature:

BLAST of Carg23835 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605431.1	5.7e-135	100.00	Proliferating cell nuclear antigen, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022947842.1	7.0e-133	98.03	proliferating cell nuclear antigen-like [Cucurbita moschata]	[more]
XP_023532278.1	3.5e-132	97.24	proliferating cell nuclear antigen-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007566.1	4.5e-132	97.64	proliferating cell nuclear antigen-like [Cucurbita maxima]	[more]
XP_022148313.1	2.0e-108	82.21	proliferating cell nuclear antigen [Momordica charantia]	[more]

BLAST of Carg23835 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82797	5.2e-107	77.87	Proliferating cell nuclear antigen OS=Nicotiana tabacum OX=4097 GN=PCNA PE=2 SV=...	[more]
P24314	1.2e-106	77.08	Proliferating cell nuclear antigen OS=Catharanthus roseus OX=4058 PE=2 SV=1	[more]
Q00268	3.4e-106	77.08	Proliferating cell nuclear antigen OS=Daucus carota OX=4039 PE=3 SV=1	[more]
O82134	2.2e-105	76.68	Proliferating cell nuclear antigen OS=Pisum sativum OX=3888 GN=PCNA PE=2 SV=1	[more]
Q9MAY3	4.1e-104	75.49	Proliferating cell nuclear antigen OS=Populus nigra OX=3691 GN=PCNA PE=2 SV=1	[more]

BLAST of Carg23835 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G7J1	3.4e-133	98.03	Proliferating cell nuclear antigen OS=Cucurbita moschata OX=3662 GN=LOC111451602...	[more]
A0A6J1L0X1	2.2e-132	97.64	Proliferating cell nuclear antigen OS=Cucurbita maxima OX=3661 GN=LOC111500022 P...	[more]
A0A6J1D3S3	9.9e-109	82.21	Proliferating cell nuclear antigen OS=Momordica charantia OX=3673 GN=LOC11101699...	[more]
A0A5A7V7Z1	2.2e-108	81.82	Proliferating cell nuclear antigen OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A0A0KE56	2.2e-108	81.82	Proliferating cell nuclear antigen OS=Cucumis sativus OX=3659 GN=Csa_6G188070 PE...	[more]

BLAST of Carg23835 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G29570.1	4.2e-104	74.70	proliferating cell nuclear antigen 2	[more]
AT1G07370.1	5.5e-104	75.10	proliferating cellular nuclear antigen 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000730	Proliferating cell nuclear antigen, PCNA	PRINTS	PR00339	PCNACYCLIN	coord: 34..52 score: 75.94 coord: 56..80 score: 61.9 coord: 203..217 score: 63.49 coord: 110..132 score: 62.53 coord: 10..29 score: 62.38 coord: 241..254 score: 38.36
IPR000730	Proliferating cell nuclear antigen, PCNA	TIGRFAM	TIGR00590	TIGR00590	coord: 1..253 e-value: 6.8E-107 score: 354.7
IPR000730	Proliferating cell nuclear antigen, PCNA	HAMAP	MF_00317	DNApol_clamp_arch	coord: 2..254 score: 17.681183
IPR022648	Proliferating cell nuclear antigen, PCNA, N-terminal	PFAM	PF00705	PCNA_N	coord: 1..123 e-value: 4.5E-49 score: 165.4
None	No IPR available	GENE3D	3.70.10.10		coord: 1..254 e-value: 4.7E-101 score: 339.5
None	No IPR available	PANTHER	PTHR11352	PROLIFERATING CELL NUCLEAR ANTIGEN	coord: 1..253
None	No IPR available	PANTHER	PTHR11352:SF8	PROLIFERATING CELL NUCLEAR ANTIGEN	coord: 1..253
None	No IPR available	CDD	cd00577	PCNA	coord: 6..253 e-value: 4.08956E-85 score: 252.165
None	No IPR available	SUPERFAMILY	55979	DNA clamp	coord: 1..125
None	No IPR available	SUPERFAMILY	55979	DNA clamp	coord: 127..253
IPR022649	Proliferating cell nuclear antigen, PCNA, C-terminal	PFAM	PF02747	PCNA_C	coord: 127..253 e-value: 1.3E-51 score: 174.1
IPR022659	Proliferating cell nuclear antigen, PCNA, conserved site	PROSITE	PS00293	PCNA_2	coord: 61..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23835-RA	Carg23835-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0006275	regulation of DNA replication
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0030337	DNA polymerase processivity factor activity