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Carg23759 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGAATCTTAACGATGTTGAATTATCAACTGCGATGAAACTCGACGAAATCGGACTGTAATGGAGATTCTGAGACGTCGATTTCTTCTGTCGTGAAAGCCGATGAGGTCTGCCATCCTACAGTACGATGATAAGATTCCTCTGTTTAATCTCAAATGATTCTGAAAAGGGAAAAATCTCTGCGGTGGTGACGTGGTGCGTCGCCGGAAATTAGTGACTCCAGCGCTATTTCCAGTGGCTGGTATGGTGGGGAAATACTGGGTTCTCCGGTGTTCCGGAAGTCATGTGGTTGAACCTGTCGGTCGACCGGTGTTTTTGTCGGCGAAGCGTCGGTGAGGAACGTGCGAGCTGAAAGGATGTGCGAGGGCAGAAACAGGAGCGGGTAGGAAAGAGACGCGGCTACCGTGGGCCGCGGTCCCGGAGTTTTTCCCGTACCGGGAGTTACTTTTTACCGGCCGCACCGGGAAGAGGAGATCTCAATATTTGGAATAGAATAAAATCTCAATCTGGTCTTTTTTTTTTTTGTTGTTTATTTAATTCCTGGTTACCAATGGAGAATTTTTATTTTTTTGAATTTTTTTCCTCTATGGATTGTGGGAAACAAGTTTGATTTAGGTAAAAAAAAACCAGAAAAAAAGTCCCAATTTCTGTAAATAATTAATTAATTTTTTAAATTTTCTTTGTTGACAATCAGTTTGGGTTTGAATTTTCCCAGGTGTGGTCGGACACTGCTCCATCGCTGCAGCAGGTTTGTTTTGTTTGTTTTTGTGTTTTTTTTGAAGTAAATATCATATATTTTATATTAAAATTTATGGGTTTTGTTACGAGCAGGGCATATGATCGAGCAGCGATAAAATTTAGGGGAGTTAATGCAGATATAAACTTCAATATAAGCGACTACGATGAAGATATGAAGCAAGTGAGTGATTTACGAGCCAATCCAAAATAACACGATTTTTATAAATATATATATATATTTTTTTTGAAATTGAAGAATGACAAAATTTTACTTTGCAGCTGAAAAATCTAAGCAAAGAAGAATTTGTGCACGTTCTTCGTCGACAAAGCACTGGATTTTCTCGTGGAGGATCGAAGCTAGAGGATTATCTCTTCAGAAATATGGAAGATGGGAAACTCAAACGAGTCCACTTATGACGAAGAAGTAAGCCTAAAAAAATGCTCCAAAAAAGTAAAAATTCAAAAGAAAGAACTAAATAACCGTTTTTTTTTTTACCACAGTGAAATCGAGGAAAGGTCGACAATGGTAGATGCAAACAATGGAGGTAAAAAAAATTAAGAAACTAAAAGATTTTCACCTTCCTTATTTATTTATTAAAATAAATTTACTTTTAATTCAGGCAATGGAGCCATCAATCTTGATCTAAGCATGGGAGGAAATTTTCACTACCATTTAAGAAATTCTTCCCAAAACTCAACATTAAAAAACCAAAGTAA ATGTTGAATCTTAACGATGTTGAATTATCAACTGCGATGAAACTCGACGAAATCGGACTGTGTGGTCGGACACTGCTCCATCGCTGCAGCAGGGCATATGATCGAGCAGCGATAAAATTTAGGGGAGTTAATGCAGATATAAACTTCAATATAAGCGACTACGATGAAGATATGAAGCAACTGAAAAATCTAAGCAAAGAAGAATTTGTGCACGTTCTTCGTCGACAAAGCACTGGATTTTCTCGTGGAGGATCGAAGCTAGAGGATTATCTCTTCAGAAATATGGAAGATGGGAAACTCAAACGAGTCCACTTATGACGAAGAATGAAATCGAGGAAAGGTCGACAATGGTAGATGCAAACAATGGAGGCAATGGAGCCATCAATCTTGATCTAAGCATGGGAGGAAATTTTCACTACCATTTAAGAAATTCTTCCCAAAACTCAACATTAAAAAACCAAAGTAA ATGTTGAATCTTAACGATGTTGAATTATCAACTGCGATGAAACTCGACGAAATCGGACTGTGTGGTCGGACACTGCTCCATCGCTGCAGCAGGGCATATGATCGAGCAGCGATAAAATTTAGGGGAGTTAATGCAGATATAAACTTCAATATAAGCGACTACGATGAAGATATGAAGCAACTGAAAAATCTAAGCAAAGAAGAATTTGTGCACGTTCTTCGTCGACAAAGCACTGGATTTTCTCGTGGAGGATCGAAGCTAGAGGATTATCTCTTCAGAAATATGGAAGATGGGAAACTCAAACGAGTCCACTTATGA MLNLNDVELSTAMKLDEIGLCGRTLLHRCSRAYDRAAIKFRGVNADINFNISDYDEDMKQLKNLSKEEFVHVLRRQSTGFSRGGSKLEDYLFRNMEDGKLKRVHL Homology
BLAST of Carg23759 vs. NCBI nr
Match: KAG7030768.1 (Floral homeotic protein APETALA 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 213.0 bits (541), Expect = 1.2e-51 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of Carg23759 vs. NCBI nr
Match: XP_023517382.1 (ethylene-responsive transcription factor RAP2-7-like isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 120.6 bits (301), Expect = 8.4e-24 Identity = 60/71 (84.51%), Postives = 63/71 (88.73%), Query Frame = 0
BLAST of Carg23759 vs. NCBI nr
Match: XP_023517222.1 (AP2-like ethylene-responsive transcription factor SMZ isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 120.6 bits (301), Expect = 8.4e-24 Identity = 60/71 (84.51%), Postives = 63/71 (88.73%), Query Frame = 0
BLAST of Carg23759 vs. NCBI nr
Match: XP_022942116.1 (ethylene-responsive transcription factor RAP2-7-like isoform X3 [Cucurbita moschata]) HSP 1 Score: 120.6 bits (301), Expect = 8.4e-24 Identity = 60/71 (84.51%), Postives = 63/71 (88.73%), Query Frame = 0
BLAST of Carg23759 vs. NCBI nr
Match: KAG6600096.1 (Ethylene-responsive transcription factor RAP2-7, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 120.6 bits (301), Expect = 8.4e-24 Identity = 60/71 (84.51%), Postives = 63/71 (88.73%), Query Frame = 0
BLAST of Carg23759 vs. ExPASy Swiss-Prot
Match: B8AXC3 (APETALA2-like protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=AP2-1 PE=2 SV=2) HSP 1 Score: 108.2 bits (269), Expect = 5.6e-23 Identity = 52/70 (74.29%), Postives = 60/70 (85.71%), Query Frame = 0
BLAST of Carg23759 vs. ExPASy Swiss-Prot
Match: Q2TQ34 (APETALA2-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=AP2-1 PE=1 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 5.6e-23 Identity = 52/70 (74.29%), Postives = 60/70 (85.71%), Query Frame = 0
BLAST of Carg23759 vs. ExPASy Swiss-Prot
Match: Q9SK03 (Ethylene-responsive transcription factor RAP2-7 OS=Arabidopsis thaliana OX=3702 GN=RAP2-7 PE=2 SV=2) HSP 1 Score: 105.5 bits (262), Expect = 3.7e-22 Identity = 50/70 (71.43%), Postives = 59/70 (84.29%), Query Frame = 0
BLAST of Carg23759 vs. ExPASy Swiss-Prot
Match: P47927 (Floral homeotic protein APETALA 2 OS=Arabidopsis thaliana OX=3702 GN=AP2 PE=1 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 8.1e-22 Identity = 50/70 (71.43%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of Carg23759 vs. ExPASy Swiss-Prot
Match: B8AMA9 (APETALA2-like protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=AP2-2 PE=3 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 5.3e-21 Identity = 46/70 (65.71%), Postives = 59/70 (84.29%), Query Frame = 0
BLAST of Carg23759 vs. ExPASy TrEMBL
Match: A0A6J1JUN6 (ethylene-responsive transcription factor RAP2-7-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488018 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 4.1e-24 Identity = 60/71 (84.51%), Postives = 63/71 (88.73%), Query Frame = 0
BLAST of Carg23759 vs. ExPASy TrEMBL
Match: A0A6J1JUP5 (ethylene-responsive transcription factor RAP2-7-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488018 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 4.1e-24 Identity = 60/71 (84.51%), Postives = 63/71 (88.73%), Query Frame = 0
BLAST of Carg23759 vs. ExPASy TrEMBL
Match: A0A6J1JLN1 (ethylene-responsive transcription factor RAP2-7-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111488018 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 4.1e-24 Identity = 60/71 (84.51%), Postives = 63/71 (88.73%), Query Frame = 0
BLAST of Carg23759 vs. ExPASy TrEMBL
Match: A0A6J1FMY3 (ethylene-responsive transcription factor RAP2-7-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111447286 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 4.1e-24 Identity = 60/71 (84.51%), Postives = 63/71 (88.73%), Query Frame = 0
BLAST of Carg23759 vs. ExPASy TrEMBL
Match: A0A6J1FVM3 (ethylene-responsive transcription factor RAP2-7-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447286 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 4.1e-24 Identity = 60/71 (84.51%), Postives = 63/71 (88.73%), Query Frame = 0
BLAST of Carg23759 vs. TAIR 10
Match: AT2G28550.1 (related to AP2.7 ) HSP 1 Score: 105.5 bits (262), Expect = 2.6e-23 Identity = 50/70 (71.43%), Postives = 59/70 (84.29%), Query Frame = 0
BLAST of Carg23759 vs. TAIR 10
Match: AT2G28550.2 (related to AP2.7 ) HSP 1 Score: 105.5 bits (262), Expect = 2.6e-23 Identity = 50/70 (71.43%), Postives = 59/70 (84.29%), Query Frame = 0
BLAST of Carg23759 vs. TAIR 10
Match: AT2G28550.3 (related to AP2.7 ) HSP 1 Score: 105.5 bits (262), Expect = 2.6e-23 Identity = 50/70 (71.43%), Postives = 59/70 (84.29%), Query Frame = 0
BLAST of Carg23759 vs. TAIR 10
Match: AT4G36920.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 104.4 bits (259), Expect = 5.8e-23 Identity = 50/70 (71.43%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of Carg23759 vs. TAIR 10
Match: AT4G36920.2 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 104.4 bits (259), Expect = 5.8e-23 Identity = 50/70 (71.43%), Postives = 57/70 (81.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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