Carg23755 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg23755
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr06: 9371059 .. 9374049 (-)
RNA-Seq ExpressionCarg23755
SyntenyCarg23755
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCGATTGTCTCTCTCTCGGCCCTCTTTCTCTCTATCCTAACCCTAATCGAACCTGCTACTTCATGTGCGATGATTCCGATCTCTTTTTTTTTGATATTATCATTCTGGTTGAGTTGATGGCTTCGGAGGTGCTAACAAATGAAGCTTACCATGAATAGTAAGATTTTCACATCTCTACTGTTTGGACTAAAATCAATGATTTACTCAAATTTTTTCTTGCAAAAAGAAATTCACTTGGATGTCTTGTATAGATGTGATATTTATAGTTACGGAATCATAATATGGGAGCTTTCCGCAATGCAGTGACATGAATGAACTTGATGCAAGTTGTAGGCTCATATCTTTTCGTTATCAGGAAGTTTTGGCGAAGGTAAATATTCAAGTGTTGCTTGAACTAGAAGAACATAATAACATGAACGAATATCCAAGTGTTGATTGCCTTAAATAGTTGTTATGTGAAATATTGGTTGCATTGGAAAATTGGTTGCCTTACTGTAGTAGTTGCTTCCAAACATTAGCGTTAGTAGTAGTGTTCAAACATCTGTGAGGCTTGCCATATCCATGCTCCTTTGGAATGAACACGGAAGTAAGTAAAGTTCATTATTTAAGGAGAATACTCTTTAATTAAATTTGGAGATGGAAAGGAAGCTTGAATATCGCATATTTATGTGCCTTCTTACTGCAAAGAAAGGAATCAGATCCTTATTTGGCTATTGTTAAGGTTCGATGGTCTCAGGAAGAAACATTCTTGGTATGAATAAGTTTAATTGATCGATAGCTGAATCGAAACTTTTTTGAAATTCCTCTGGATCAAGAGATGTTCACATGGTCCATAATGAGAGATAATCCAACCCAATCTTTGCTTGACAGAAATATAGACTCTATGGAATGGTCTCGATGTATTTAGAACTCAAGAATTTGTAGTGTCCTGAAAATTATACAAGAAAGAAAATTCTCAGAGCTTCGTTACCAAGAATATTGATTCGAGGCTGATACTTAGAGTAAGAGAGTGATTGATAAGACCTTTAGAAGAATTAGAAGGACAAAAAAGGCACCAGGAGTAAAAAATTCTGTTTACTAAAATCTGATTTTGTTAACTTGGTCAAGCTTTTTGACAAGGGCACGTCAATTCATGTCTCAAGGGAACATTAGCCTTTTCACTGATGGACAACGATTATTGACCGTTAGCCTTTTCACTTCAATGTATAGGATCCTTTCCAAGGCACTATTTGAAAGATTTGATGTCCTTTGACTATTTGTCCTGCTCAAAATGCTTTTTTTAGAGGAAGACAAATCTTCGATCCTATTTGCAATAGAGGAAGAAAAAAAAAAGGTTGTATCTTAGAACTAGACCTTGAAAATGTCTTTGACTGAGTTGATTGGGATTTCTTATTTACTATCAATTTGCAGATGTGACATTGTATTTCTTTTTTTCTCTTTTTTTGTTAGGATAAGGACTTCGCAATTTAGGACTTAGTTTTTATACTTAGAGCTTTTGAAGATGCAGCTGGTTTGAAAATTAATTGGAAAAGATCATCAGATTGTGGAATCAATATTGAGGCCAAAAGAGTGGAGTTAACTGCTATTCAGCTGGGATGGTACAAAGCTGAAAATTGCCTATTTCTTATCTTGGTTTTAACTATCCTTCCTTTCTAAGCCATTAGATCATGGACGTTTGGGTCTCGGAAACCTTTTCAAATCACCTTTATTTCTTTAGGCCCATTTCAAAGAGGTGATGGAGGTATTCAAATGAGCTGCTTGAATTGTGGACCAAAGTGGTTATATATGAAACTGGTGAGTTTGATAGATTCGCTATACAGAAAATTGGAAATTGCCGGAGAGGTCCTTGGTGGAATATATCCGAAGTAACATTTTGGTAGATCCTACTAGCATTTTGGTTGGAAATGGAAGAACAAAATTTTGGCAAGACTCTCGGCTGGGCGATATCCATCTAGCATATTGCAACCTCCAACTTTTATGCAGTATTCTGAGAACAAAGCTGCTCTGCAACGGGGTTTCTTTAAACCTCAACGAATAGATCACAGAATATTTTGGCAAAAGGGGAAACCTTCATGAAGAAGAAAAGGAGAAGCTTAGATTAGAAGACTCTTGGAGGTGATTAATGAAGCTTCCCCCACTTTTTTGCCTGACAAAAAATGCAAATTTGGCCTCTGGTAAGCAAGTAATACATCTTTCCACCAATAAGATCGGGAGAAAAGGAAAAGTGTGCAGTCTCTTCATTCTGCCTTCCTTGTTCCTCTAGACCTTCTCTAGAGAGTGCTTCCTCAGCTCGAACCTGCTGCAATGCACCTTCTCCTCGTTTTAAGACCAAATGAGACCTCTATAGAAGAAATTTTGTGGACTAATATGAACTACTCTTTACTTTGTAGACTTTCACGCTCATGTTTTGATTTGACATGGCTGATGGTTGCATGTAAACCAATTGTGAATAAAAATAAAGGCATATAGAGAAGAGGGAAAGAAAAAACCAACGAAAAATGTTGAAATTCACTTTCATTCTCCTTCACTAGTTTCTTTTTAGGTAAAAACATGTAGAGTGAAGCTTCAAACTTTCGACCTCTTGATTGAGGATGTATATGTCTCAACCACTTGAGCTATGCTCAAGTTGAACTTTCCTTTTCACTAGTTGCAACATACAATGCCTCTCACAACACTATATCTATATCAAAATTTACCTCTAGAAAATGAAAAATGTTACAAATGCACTGAAGTTAAACCTTATTCTAAACTCCAGGGGGCTTGTAAACTATAACCAAATAGTATGAATGGAAGCACTGTTGTTTATCGAGTAATGAACTTAAAATGTTGAATTAAGGATGGAGAAGTTATTGAGAGATCCCTTGCAGTTGAAGCGGCCAATGTCATCAGTTTCTGGTGGCTCAATGGCAGTGAGATTGATGTAAGAAAGCTGAACGTTCTCACAAGGCACGGCTGAGCTGCATTGCAGATTTACTGCAAATTCAGAGTTGT

mRNA sequence

GCGATTGTCTCTCTCTCGGCCCTCTTTCTCTCTATCCTAACCCTAATCGAACCTGCTACTTCATGTGCGATGATTCCGATCTCTTTTTTTTTGATATTATCATTCTGGTTGAGTTGATGGCTTCGGAGGTGCTAACAAATGAAGCTTACCATGAATAGTAAGATTTTCACATCTCTACTGTTTGGACTAAAATCAATGATTTACTCAAATTTTTTCTTGCAAAAAGAAATTCACTTGGATGTCTTGTATAGATGTGATATTTATAGTTACGGAATCATAATATGGGAGCTTTCCGCAATGCAGTGACATGAATGAACTTGATGCAAGTTGTAGGCTCATATCTTTTCGTTATCAGGAAGTTTTGGCGAAGGATGGAGAAGTTATTGAGAGATCCCTTGCAGTTGAAGCGGCCAATGTCATCAGTTTCTGGTGGCTCAATGGCAGTGAGATTGATGTAAGAAAGCTGAACGTTCTCACAAGGCACGGCTGAGCTGCATTGCAGATTTACTGCAAATTCAGAGTTGT

Coding sequence (CDS)

ATGAATGAACTTGATGCAAGTTGTAGGCTCATATCTTTTCGTTATCAGGAAGTTTTGGCGAAGGATGGAGAAGTTATTGAGAGATCCCTTGCAGTTGAAGCGGCCAATGTCATCAGTTTCTGGTGGCTCAATGGCAGTGAGATTGATGTAAGAAAGCTGAACGTTCTCACAAGGCACGGCTGA

Protein sequence

MNELDASCRLISFRYQEVLAKDGEVIERSLAVEAANVISFWWLNGSEIDVRKLNVLTRHG
Homology
[Close]
BLAST of Carg23755 vs. NCBI nr
Match: KAG7028996.1 (hypothetical protein SDJN02_10179 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 124.8 bits (312), Expect = 2.5e-25
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 

Query: 1  MNELDASCRLISFRYQEVLAKDGEVIERSLAVEAANVISFWWLNGSEIDVRKLNVLTRHG 60
          MNELDASCRLISFRYQEVLAKDGEVIERSLAVEAANVISFWWLNGSEIDVRKLNVLTRHG
Sbjct: 1  MNELDASCRLISFRYQEVLAKDGEVIERSLAVEAANVISFWWLNGSEIDVRKLNVLTRHG 60

The following BLAST results are available for this feature:
BLAST of Carg23755 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7028996.12.5e-25100.00hypothetical protein SDJN02_10179 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Carg23755 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg23755 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg23755 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg23755-RACarg23755-RAmRNA