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Carg23713 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACTTTCTTGGGTTATGCAACTGGAAATCAAATGCGAAGATGCAAGGTTTTCGCAGAATTAATCAATTGGTACGAAGGCAAAGTCCCGATGCTCATTTCAAATTGATTAGAGGTTATCCTCTAAATGGGGATGCTGGCTGTAGCTGCTCGGCGCCAAGGTCGATGGAATGTAGTTTTGGGAATCCGTATGCGTCTTTGAGTGGGCAATCAAAATCCGGAAGCCTTTGTATGTATTTCTGTTTGTTTAATATTTTGTGCATTATGTAGTATGATATGTTCTTGTTGTTTTCAAAGGTTCTATAGCTATTCAGTAAATCTACTTTGGTTTTATACATATATAATTTGCGACATTTAATCTAGTTCGAATTCCAAGCTTTTACGAATTCATTTATGCTTCTTGTTTGAGTTCATAAGCAATGAGGCACAAGTAAATCTCATGATATCGGTCTTGGCCGACACCTGATTGACGGTAGGGGAGCGGGTAATATGTATAGTAACTTATCAATTGTGTACATTATGTATGTGTCTCCGACCAGACGGGATTGGTGCTAAATGTCTTATTGATATAAAGTGACGTAGAGATGAGTACATTTGCTGGAACTGGCTTCTGAGTTCAGTTATGGCTTAATCAACAGAACTATGAACTTCACTGTTGTCTCGAACACGTAGTTATTATGTATCCTATTTTCCTTCACAACAAATTAGTCCGAAAAATAATTAGCTCAAGTCGAGCTGATGTCCCTTTTCAAGGGAAAAAAGAAAAAAGTGGTTATAGCTCTTTGCTTCTATGATCCTTGCCAATTGAAGAGCCTTTCATTAATTTCCTTGTTCTGTTGGTTTGTGGGTACTCATTGGAAGCAATATCTTTTTATTCAAGAGTTTGTTTTGGAATATATCACTTTGTAACAATTTATCAACTATGTAGCAGAGAAGTATGGGCTCTCAAATGGAATTTGTGCCTTCGAGCAACCATATATCTTCATCTTGTTCAGCATTCCAAAGTCTTAGGCCACATTCATATCAGTTGGCAGAGATTGCAGCTCCTTTTTCTAGGAGGGGTATTGCTACGACAAGTTCAACCGAATCGGCTCCACAAGGATCTCCCGCAGTTGATTCTGATATAACTCCTCGCATCAAATTTAAGCGGCTTGATAAAACCTCAAAATACATAATGCAGGTATTCGCATTTCTGAGTACTTTTGGAAAAGAAGTAATTTGATTTTATCGTCCAGTCTGTTTGATTTCGATATATTGTTTTCTTTTCCCCACAGATTTTAGATAAGGAAGCTATTGGGGAGGTAAAAAAAGCACAGAGAGAAATTCCAGATATAAAGCCAGGCTATATTGTGCAGCTCAAAGTGGTAGAGTTCATTTCAGTCAAATACTATATCAGCAGTTGTAGATGAGGTTACTGAACAATTTTCTGGCTTTTGCTGTCTTGTGTGAACAGGAAGTACCTGAGAACAAGCGACGTGTCTCAACGTTGAAAGGCATTGTAATAGCAAGACGAAATGCAGGTCTTAACACAACTTTTAGATTAAGAAGGCTAGTTGCTGGTGTTGGGATTGAATCCCTCTTCCCTCTGTAAGTAAATGCTGATTTAAAAATCTGATACAAATGTATTAGAACATGATGAACGCTGCGATCACACGTGTTGAAGTTGGTGTATTAATATGAACATACATGTGTTTATTCTTCTTGTGTATGTCTATTTCTGATAGCACTTTGCTTATGACTAAACAAGTGGGTGATGCATGACAGATACTCACCAAACATAAAAGAAATTATGGTTTTGGACAAGAAGAAAGTGCGGAGGGCTAAGCTTTACTATCTTAGGGACAAAATGAACGCGCTTAAGAAGCACTAGCCAGCAAGCTTTCTATTCGGTGGGGTCAGAGGTGTATCCGTAACAAAGGTGCGCTGTAATCATTTTTTAGCAAGAAATCTCAAGAGTTTTCATGATTACCTTATCCTTGTTTATGCATGGAGAACCAACCCGAGTTTTCATGATCTGGCTG ATGGACTTTCTTGGGTTATGCAACTGGAAATCAAATGCGAAGATGCAAGGTTTTCGCAGAATTAATCAATTGGTACGAAGGCAAAGTCCCGATGCTCATTTCAAATTGATTAGAGGTTATCCTCTAAATGGGGATGCTGGCTGTAGCTGCTCGGCGCCAAGGTCGATGGAATGTAGTTTTGGGAATCCGTATGCGTCTTTGAGTGGGCAATCAAAATCCGGAAGCCTTTCATTCCAAAGTCTTAGGCCACATTCATATCAGTTGGCAGAGATTGCAGCTCCTTTTTCTAGGAGGGGTATTGCTACGACAAGTTCAACCGAATCGGCTCCACAAGGATCTCCCGCAGTTGATTCTGATATAACTCCTCGCATCAAATTTAAGCGGCTTGATAAAACCTCAAAATACATAATGCAGATTTTAGATAAGGAAGCTATTGGGGAGGTAAAAAAAGCACAGAGAGAAATTCCAGATATAAAGCCAGGCTATATTGTGCAGCTCAAAGTGGAAGTACCTGAGAACAAGCGACGTGTCTCAACGTTGAAAGGCATTGTAATAGCAAGACGAAATGCAGGTCTTAACACAACTTTTAGATTAAGAAGGCTAGTTGCTGGTGTTGGGATTGAATCCCTCTTCCCTCTATACTCACCAAACATAAAAGAAATTATGGTTTTGGACAAGAAGAAAGTGCGGAGGGCTAAGCTTTACTATCTTAGGGACAAAATGAACGCGCTTAAGAAGCACTAGCCAGCAAGCTTTCTATTCGGTGGGGTCAGAGGTGTATCCGTAACAAAGGTGCGCTGTAATCATTTTTTAGCAAGAAATCTCAAGAGTTTTCATGATTACCTTATCCTTGTTTATGCATGGAGAACCAACCCGAGTTTTCATGATCTGGCTG ATGGACTTTCTTGGGTTATGCAACTGGAAATCAAATGCGAAGATGCAAGGTTTTCGCAGAATTAATCAATTGGTACGAAGGCAAAGTCCCGATGCTCATTTCAAATTGATTAGAGGTTATCCTCTAAATGGGGATGCTGGCTGTAGCTGCTCGGCGCCAAGGTCGATGGAATGTAGTTTTGGGAATCCGTATGCGTCTTTGAGTGGGCAATCAAAATCCGGAAGCCTTTCATTCCAAAGTCTTAGGCCACATTCATATCAGTTGGCAGAGATTGCAGCTCCTTTTTCTAGGAGGGGTATTGCTACGACAAGTTCAACCGAATCGGCTCCACAAGGATCTCCCGCAGTTGATTCTGATATAACTCCTCGCATCAAATTTAAGCGGCTTGATAAAACCTCAAAATACATAATGCAGATTTTAGATAAGGAAGCTATTGGGGAGGTAAAAAAAGCACAGAGAGAAATTCCAGATATAAAGCCAGGCTATATTGTGCAGCTCAAAGTGGAAGTACCTGAGAACAAGCGACGTGTCTCAACGTTGAAAGGCATTGTAATAGCAAGACGAAATGCAGGTCTTAACACAACTTTTAGATTAAGAAGGCTAGTTGCTGGTGTTGGGATTGAATCCCTCTTCCCTCTATACTCACCAAACATAAAAGAAATTATGGTTTTGGACAAGAAGAAAGTGCGGAGGGCTAAGCTTTACTATCTTAGGGACAAAATGAACGCGCTTAAGAAGCACTAG MDFLGLCNWKSNAKMQGFRRINQLVRRQSPDAHFKLIRGYPLNGDAGCSCSAPRSMECSFGNPYASLSGQSKSGSLSFQSLRPHSYQLAEIAAPFSRRGIATTSSTESAPQGSPAVDSDITPRIKFKRLDKTSKYIMQILDKEAIGEVKKAQREIPDIKPGYIVQLKVEVPENKRRVSTLKGIVIARRNAGLNTTFRLRRLVAGVGIESLFPLYSPNIKEIMVLDKKKVRRAKLYYLRDKMNALKKH Homology
BLAST of Carg23713 vs. NCBI nr
Match: KAG7019281.1 (50S ribosomal protein L19, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 482.6 bits (1241), Expect = 2.0e-132 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0
BLAST of Carg23713 vs. NCBI nr
Match: KAG6583579.1 (50S ribosomal protein L19, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 450.7 bits (1158), Expect = 8.3e-123 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
BLAST of Carg23713 vs. NCBI nr
Match: XP_022970336.1 (50S ribosomal protein L19-2, chloroplastic-like isoform X1 [Cucurbita maxima] >XP_022970337.1 50S ribosomal protein L19-2, chloroplastic-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 382.5 bits (981), Expect = 2.8e-102 Identity = 212/264 (80.30%), Postives = 215/264 (81.44%), Query Frame = 0
BLAST of Carg23713 vs. NCBI nr
Match: XP_038896029.1 (uncharacterized protein LOC120084206 [Benincasa hispida]) HSP 1 Score: 360.5 bits (924), Expect = 1.1e-95 Identity = 204/269 (75.84%), Postives = 212/269 (78.81%), Query Frame = 0
BLAST of Carg23713 vs. NCBI nr
Match: KAE8652777.1 (hypothetical protein Csa_022701 [Cucumis sativus]) HSP 1 Score: 359.4 bits (921), Expect = 2.5e-95 Identity = 203/275 (73.82%), Postives = 218/275 (79.27%), Query Frame = 0
BLAST of Carg23713 vs. ExPASy Swiss-Prot
Match: Q8W463 (50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g17560 PE=2 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.1e-29 Identity = 64/109 (58.72%), Postives = 92/109 (84.40%), Query Frame = 0
BLAST of Carg23713 vs. ExPASy Swiss-Prot
Match: Q8RXX5 (50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g47190 PE=2 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.5e-29 Identity = 64/109 (58.72%), Postives = 91/109 (83.49%), Query Frame = 0
BLAST of Carg23713 vs. ExPASy Swiss-Prot
Match: P82413 (50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL19 PE=1 SV=2) HSP 1 Score: 127.5 bits (319), Expect = 2.1e-28 Identity = 83/207 (40.10%), Postives = 125/207 (60.39%), Query Frame = 0
BLAST of Carg23713 vs. ExPASy Swiss-Prot
Match: A5G0G7 (50S ribosomal protein L19 OS=Acidiphilium cryptum (strain JF-5) OX=349163 GN=rplS PE=3 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 8.9e-19 Identity = 49/106 (46.23%), Postives = 73/106 (68.87%), Query Frame = 0
BLAST of Carg23713 vs. ExPASy Swiss-Prot
Match: Q2G8H1 (50S ribosomal protein L19 OS=Novosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CCUG 56034 / CIP 105152 / NBRC 16084 / F199) OX=279238 GN=rplS PE=3 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 9.8e-18 Identity = 52/106 (49.06%), Postives = 72/106 (67.92%), Query Frame = 0
BLAST of Carg23713 vs. ExPASy TrEMBL
Match: A0A6J1I0B3 (50S ribosomal protein L19-2, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469331 PE=3 SV=1) HSP 1 Score: 382.5 bits (981), Expect = 1.3e-102 Identity = 212/264 (80.30%), Postives = 215/264 (81.44%), Query Frame = 0
BLAST of Carg23713 vs. ExPASy TrEMBL
Match: A0A0A0LV41 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G126060 PE=3 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 8.4e-97 Identity = 208/284 (73.24%), Postives = 223/284 (78.52%), Query Frame = 0
BLAST of Carg23713 vs. ExPASy TrEMBL
Match: A0A6J1GUP7 (54S ribosomal protein subunit img1, mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457281 PE=3 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 4.3e-93 Identity = 199/270 (73.70%), Postives = 211/270 (78.15%), Query Frame = 0
BLAST of Carg23713 vs. ExPASy TrEMBL
Match: A0A6J1GVN3 (54S ribosomal protein subunit img1, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457281 PE=3 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 5.7e-93 Identity = 199/271 (73.43%), Postives = 211/271 (77.86%), Query Frame = 0
BLAST of Carg23713 vs. ExPASy TrEMBL
Match: A0A6J1K1Y5 (50S ribosomal protein L19, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490302 PE=3 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 2.4e-91 Identity = 200/270 (74.07%), Postives = 209/270 (77.41%), Query Frame = 0
BLAST of Carg23713 vs. TAIR 10
Match: AT5G11750.1 (Ribosomal protein L19 family protein ) HSP 1 Score: 219.5 bits (558), Expect = 2.9e-57 Identity = 115/154 (74.68%), Postives = 135/154 (87.66%), Query Frame = 0
BLAST of Carg23713 vs. TAIR 10
Match: AT4G11630.1 (Ribosomal protein L19 family protein ) HSP 1 Score: 214.5 bits (545), Expect = 9.3e-56 Identity = 112/153 (73.20%), Postives = 135/153 (88.24%), Query Frame = 0
BLAST of Carg23713 vs. TAIR 10
Match: AT1G24240.1 (Ribosomal protein L19 family protein ) HSP 1 Score: 209.5 bits (532), Expect = 3.0e-54 Identity = 119/191 (62.30%), Postives = 145/191 (75.92%), Query Frame = 0
BLAST of Carg23713 vs. TAIR 10
Match: AT4G17560.1 (Ribosomal protein L19 family protein ) HSP 1 Score: 131.7 bits (330), Expect = 8.0e-31 Identity = 64/109 (58.72%), Postives = 92/109 (84.40%), Query Frame = 0
BLAST of Carg23713 vs. TAIR 10
Match: AT5G47190.1 (Ribosomal protein L19 family protein ) HSP 1 Score: 131.3 bits (329), Expect = 1.0e-30 Identity = 64/109 (58.72%), Postives = 91/109 (83.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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