Carg23711 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23711
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	CASP-like protein
Location	Carg_Chr13: 2184104 .. 2185711 (+)
RNA-Seq Expression	Carg23711
Synteny	Carg23711

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGTGAGCCATGCGACGGTTCACCCGGCCGAAGATCCCCCTACTACCGACGGCGCGAATGCGCCCATGGTCAGGATGAAGGACATGGAAGGAATGCCCGGCACCCGCGGAGGACTCGCTTTGCGATTCTTTCAGTTTCTCTTTGCGGCGGCGGCGCTGGTTGTCATGGCTACTACCAGTGATTTCCCTTCTGTTACTGCCTTCTGGTAAATCTCATTTTTCCTCGATTGAACCTCTCTCTCTGAACTTGCGTTTCGTACAACTTTGTTGTGTATATTGTTACTTTATTTTTCTTCTATTTCTTTGGAAGGATAAGGCGATTTGTTATCTTAGTAGCTTTTGGATTTAGGATTCGTCGGGTTGGATCTAATTTTGCAAGAAATGGATTTAATTTTGCAGTGAAATAGATTCATTTACTTCGTTTTAATTAGGTTTGCTACTTGCCCACGCAATTATGATCGAACTTTCAGATAAGTTAAGCCCGAATTTTGGAGCTAATGAACAAGAATTCTGTAAAATGTATCGATTGGTTGTTGATGGTTCAATACACTGAAGAGGCAAGAACTTGATCAGATTGTTGTTATGCTTTGTTGCCTGATAATAGTCATTTCTTATATGGTTGATCCCAGATTCATTGGCATTAGTATCTTTTTATCCTTGGAATTAAGTTTAAGGTTTATCTTTTTATCATTTACTTCATCTTCAAGTTCTTAGCTCGTGTATATGAATCTTATGCTTATTGAAGCTATGAAAAGTTAAATTTGCAGCTTGATTTTCTACACTTGGTCTTTATGTGCGTGCTGTTCCTTAAACAATCAAATCTTCTGCCTTTTCAGCTATCTTGTTGCAGCAGCTGGTTTGCAGAGTTTGTGGAGCCTCTTTTTGGCCTTCATTGATATATATGCTCTATTAGTGAAGAGATCCTTACAGAATTGCAGGATAGTCAGCTTATTCACTATTGGTGATGGTGTATGTTTATAGAAAAATTTTGATTTCGGCATCCGTAGATTCACTTTTATGTTCTTCAATATTCTGGAAGCTGATTGCTTTGCTGCATTACTAGTTAGCTCAACACCAATTTTCTTGGACTGGATTAATGAAATTAATGTGTTTTAGCATGTTAACCTTAAAGCCTGGTGGTATTCTCTTAGGTGAATTGGACTTTCAATTGTTGTTTCTTACATCAAGTTATGTACTGATATCACTCTCTGTTGCTGTTGCATATAAAACTATCATGATTGCAATCATTTTCATACCATAATAATTGATTACTTCGAGATCCCTTTAGAACTCGCACAATTTCTGCTGTCATTTTCTTTCGATCAATTATCAATGATGCACCTTTCCTGACTTGTCTGGAATTTCACTAGCCTAGCAGCTGACACCTGAACTTTTTTCCCTTCAGATCACATCTACCCTCACATTCGCTGCAGCTTGTGCTTCGGCAGGCATCACTGTTCTTATAGACAACGATATCGGTAGCTGCAGCGAGAACCACTGTGTACAGTTTGAAACTGCAACGGCCATGGCATTTATTAGCTGGTTTACTGCGTTGCCTTCGTTCTTCATGAACTTCTGGTCTCTTGCATCCCGATGAATTTGGCT

mRNA sequence

ATGAATGTGAGCCATGCGACGGTTCACCCGGCCGAAGATCCCCCTACTACCGACGGCGCGAATGCGCCCATGGTCAGGATGAAGGACATGGAAGGAATGCCCGGCACCCGCGGAGGACTCGCTTTGCGATTCTTTCAGTTTCTCTTTGCGGCGGCGGCGCTGGTTGTCATGGCTACTACCAGTGATTTCCCTTCTGTTACTGCCTTCTGCTATCTTGTTGCAGCAGCTGGTTTGCAGAGTTTGTGGAGCCTCTTTTTGGCCTTCATTGATATATATGCTCTATTAGTGAAGAGATCCTTACAGAATTGCAGGATAGTCAGCTTATTCACTATTGGTGATGGTATCACATCTACCCTCACATTCGCTGCAGCTTGTGCTTCGGCAGGCATCACTGTTCTTATAGACAACGATATCGGTAGCTGCAGCGAGAACCACTGTGTACAGTTTGAAACTGCAACGGCCATGGCATTTATTAGCTGGTTTACTGCGTTGCCTTCGTTCTTCATGAACTTCTGGTCTCTTGCATCCCGATGAATTTGGCT

Coding sequence (CDS)

ATGAATGTGAGCCATGCGACGGTTCACCCGGCCGAAGATCCCCCTACTACCGACGGCGCGAATGCGCCCATGGTCAGGATGAAGGACATGGAAGGAATGCCCGGCACCCGCGGAGGACTCGCTTTGCGATTCTTTCAGTTTCTCTTTGCGGCGGCGGCGCTGGTTGTCATGGCTACTACCAGTGATTTCCCTTCTGTTACTGCCTTCTGCTATCTTGTTGCAGCAGCTGGTTTGCAGAGTTTGTGGAGCCTCTTTTTGGCCTTCATTGATATATATGCTCTATTAGTGAAGAGATCCTTACAGAATTGCAGGATAGTCAGCTTATTCACTATTGGTGATGGTATCACATCTACCCTCACATTCGCTGCAGCTTGTGCTTCGGCAGGCATCACTGTTCTTATAGACAACGATATCGGTAGCTGCAGCGAGAACCACTGTGTACAGTTTGAAACTGCAACGGCCATGGCATTTATTAGCTGGTTTACTGCGTTGCCTTCGTTCTTCATGAACTTCTGGTCTCTTGCATCCCGATGA

Protein sequence

MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATTSDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLTFAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFWSLASR

Homology

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BLAST of Carg23711 vs. NCBI nr
Match: XP_022964943.1 (CASP-like protein 5A2 [Cucurbita moschata] >XP_023519769.1 CASP-like protein 5A2 [Cucurbita pepo subsp. pepo] >XP_023519770.1 CASP-like protein 5A2 [Cucurbita pepo subsp. pepo] >KAG7019283.1 CASP-like protein 5A2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 344.4 bits (882), Expect = 6.0e-91
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT 60
           MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT
Sbjct: 1   MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT 60

Query: 61  SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT 120
           SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT
Sbjct: 61  SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT 120

Query: 121 FAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFWSLASR 178
           FAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFWSLASR
Sbjct: 121 FAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFWSLASR 177

[Close]

BLAST of Carg23711 vs. NCBI nr
Match: XP_022970342.1 (CASP-like protein 5A2 [Cucurbita maxima])

HSP 1 Score: 342.8 bits (878), Expect = 1.7e-90
Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT 60
           MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT
Sbjct: 1   MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT 60

Query: 61  SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT 120
           SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT
Sbjct: 61  SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT 120

Query: 121 FAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFWSLASR 178
           FAAACASAGITVLIDNDIGSCSENHCVQFETATA+AFISWFTALPSFFMNFWSLASR
Sbjct: 121 FAAACASAGITVLIDNDIGSCSENHCVQFETATAIAFISWFTALPSFFMNFWSLASR 177

[Close]

BLAST of Carg23711 vs. NCBI nr
Match: KAG6583581.1 (CASP-like protein 5A2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 335.9 bits (860), Expect = 2.1e-88
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT 60
           MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT
Sbjct: 1   MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT 60

Query: 61  SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT 120
           SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT
Sbjct: 61  SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT 120

Query: 121 FAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFW 173
           FAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFW
Sbjct: 121 FAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFW 172

[Close]

BLAST of Carg23711 vs. NCBI nr
Match: XP_008462581.1 (PREDICTED: CASP-like protein 5A2 [Cucumis melo] >KAA0041694.1 CASP-like protein 5A2 [Cucumis melo var. makuwa] >TYK06316.1 CASP-like protein 5A2 [Cucumis melo var. makuwa])

HSP 1 Score: 331.3 bits (848), Expect = 5.3e-87
Identity = 169/177 (95.48%), Postives = 173/177 (97.74%), Query Frame = 0


Query: 1   MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT 60
           MNVSHATVHP EDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQF FAAAAL VMATT
Sbjct: 1   MNVSHATVHPVEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFFFAAAALGVMATT 60

Query: 61  SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT 120
           SDFPSVTAFCYLVAAAGLQSLWSL LAFID+YALLVKRSLQNCRIVSLFTIGDGITSTLT
Sbjct: 61  SDFPSVTAFCYLVAAAGLQSLWSLLLAFIDMYALLVKRSLQNCRIVSLFTIGDGITSTLT 120

Query: 121 FAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFWSLASR 178
           FAAACASAGITVLIDND+GSCS+NHCVQFETATAMAFISWFTALPSFF+NFWSLASR
Sbjct: 121 FAAACASAGITVLIDNDLGSCSKNHCVQFETATAMAFISWFTALPSFFINFWSLASR 177

[Close]

BLAST of Carg23711 vs. NCBI nr
Match: XP_038894237.1 (CASP-like protein 5A2 [Benincasa hispida])

HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85
Identity = 165/177 (93.22%), Postives = 172/177 (97.18%), Query Frame = 0


Query: 1   MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT 60
           MNVSHA+VHP EDPPTTDGANAPMVRMKD EGMPGTRGGLALRFFQF FAAAALVVMATT
Sbjct: 1   MNVSHASVHPVEDPPTTDGANAPMVRMKDTEGMPGTRGGLALRFFQFFFAAAALVVMATT 60

Query: 61  SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT 120
           SDFPSV+AFCYLVAAAGLQS+WSL LAFIDIYALLV+RSLQNCRIVSLFT+GDGITSTLT
Sbjct: 61  SDFPSVSAFCYLVAAAGLQSMWSLLLAFIDIYALLVRRSLQNCRIVSLFTVGDGITSTLT 120

Query: 121 FAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFWSLASR 178
           FAAACASAGITVLIDND+ SCS+NHCVQFETATAMAFISWFTALPSFFMNFWSLASR
Sbjct: 121 FAAACASAGITVLIDNDLSSCSKNHCVQFETATAMAFISWFTALPSFFMNFWSLASR 177

[Close]

BLAST of Carg23711 vs. ExPASy Swiss-Prot
Match: Q9SKN3 (CASP-like protein 5A2 OS=Arabidopsis thaliana OX=3702 GN=At2g28370 PE=2 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 1.8e-74
Identity = 144/179 (80.45%), Postives = 158/179 (88.27%), Query Frame = 0


Query: 1   MNVSHATVHPAEDPP--TTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMA 60
           MNVSHA+VHP EDPP   T+  N P VRM DMEGMPGT  GLALRFFQFLFAAAAL VMA
Sbjct: 1   MNVSHASVHPVEDPPAAATEVENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVMA 60

Query: 61  TTSDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITST 120
           +TSDFPSVTAFCYLVAA GLQSLWSL LA +D+YA++VKRSLQN R+VSLF IGDG+TST
Sbjct: 61  STSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTST 120

Query: 121 LTFAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFWSLASR 178
           LTFAAACASAGITVLIDND+ SC++NHCVQFET+TA+AFISWF ALPSF  NFWSLASR
Sbjct: 121 LTFAAACASAGITVLIDNDLNSCAQNHCVQFETSTALAFISWFAALPSFLFNFWSLASR 179

[Close]

BLAST of Carg23711 vs. ExPASy Swiss-Prot
Match: P0DI70 (CASP-like protein 5A1 OS=Ginkgo biloba OX=3311 GN=gba_locus_10451 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.4e-58
Identity = 120/177 (67.80%), Postives = 136/177 (76.84%), Query Frame = 0


Query: 1   MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT 60
           MN SH  VHP E PP TD  +AP VRMKD +GMPGT GGLALR  QF FA  A  +M +T
Sbjct: 1   MNPSHPAVHPVEAPP-TDVHHAPRVRMKDYQGMPGTLGGLALRLGQFCFAVVAFSIMLST 60

Query: 61  SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT 120
            DF +VTAFCYLVAA  LQ LWSL LA ID YALLVKRSL+N  +VSLF +GDG+T+TLT
Sbjct: 61  DDFSTVTAFCYLVAATVLQCLWSLALAVIDGYALLVKRSLRNSLVVSLFVVGDGVTATLT 120

Query: 121 FAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFWSLASR 178
           FAAACASAGITVLI ND+  C +NHC ++ETATAMAF+SWF   PSF + FW LASR
Sbjct: 121 FAAACASAGITVLIGNDLRECDQNHCGKYETATAMAFLSWFMVSPSFLLTFWLLASR 176

[Close]

BLAST of Carg23711 vs. ExPASy Swiss-Prot
Match: Q10Q78 (CASP-like protein 5A1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0206600 PE=2 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.4e-58
Identity = 120/177 (67.80%), Postives = 135/177 (76.27%), Query Frame = 0


Query: 1   MNVSHATVHPAEDPPTTDGANAPM-VRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMAT 60
           M  S   VHP E PP  D A  P  V MKD+ GMPGT GGL LR  QF FAA AL VMA+
Sbjct: 1   MFASRPAVHPVEAPPPPDPAEQPRGVLMKDLPGMPGTAGGLGLRLAQFAFAAVALAVMAS 60

Query: 61  TSDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTL 120
           T+DFPSVT+FC+LVAAA LQ LWS  LA +DIYALLVKR L+N R V LF IGDGIT+ L
Sbjct: 61  TNDFPSVTSFCFLVAAAILQCLWSFSLAIVDIYALLVKRCLRNRRAVCLFAIGDGITAAL 120

Query: 121 TFAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFWSLAS 177
           TF+AACAS+GITVLIDND+  CSENHC  FE+ATAMAF+SWF   PSF +NFWS+AS
Sbjct: 121 TFSAACASSGITVLIDNDLDLCSENHCASFESATAMAFLSWFALSPSFLLNFWSMAS 177

[Close]

BLAST of Carg23711 vs. ExPASy Swiss-Prot
Match: P0DI68 (CASP-like protein 5A1 OS=Brachypodium distachyon OX=15368 PE=2 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 5.3e-58
Identity = 118/178 (66.29%), Postives = 134/178 (75.28%), Query Frame = 0


Query: 1   MNVSHATVHPAEDPPTTDGANAPM-VRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMAT 60
           M  S   VHP E PP TD    P  V MKD+ GMPGT GGL LR  QF+FA  AL VMA+
Sbjct: 1   MFASRPAVHPVEAPPPTDPVEQPTGVLMKDLPGMPGTAGGLGLRVAQFVFAGVALAVMAS 60

Query: 61  TSDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTL 120
           TSDFPSVTAFCYLVAA  +Q LWS  LA +DIYALLVKR L+N R V LF IGDGIT+ L
Sbjct: 61  TSDFPSVTAFCYLVAATIMQCLWSFSLAIVDIYALLVKRCLRNRRAVCLFAIGDGITAAL 120

Query: 121 TFAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFWSLASR 178
           TF AAC+SAGITVLIDND+  C+ENHC  F+TATA+AF+SWF   PSF +NFWS+A+R
Sbjct: 121 TFGAACSSAGITVLIDNDLNICAENHCGSFKTATALAFMSWFALTPSFLLNFWSMAAR 178

[Close]

BLAST of Carg23711 vs. ExPASy Swiss-Prot
Match: B4FNS3 (CASP-like protein 5A3 OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 7.2e-55
Identity = 120/190 (63.16%), Postives = 132/190 (69.47%), Query Frame = 0


Query: 1   MNVSHATVHPAE--DPPTTDGANAPM-----------VRMKDMEGMPGTRGGLALRFFQF 60
           M  S   VHP E   PP    A  P            VRMKD  G PGT  GL LR  Q 
Sbjct: 1   MRASRPAVHPVEAAPPPPAAAAEGPEAQVEGAAHPRGVRMKDPPGAPGTPAGLGLRLAQA 60

Query: 61  LFAAAALVVMATTSDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVS 120
            FAAAAL VMA+T+DFPSV+AF YLVAAA LQ LWSL LAF+DIYALLVKRSL+N R V 
Sbjct: 61  FFAAAALAVMASTNDFPSVSAFSYLVAAAILQCLWSLLLAFVDIYALLVKRSLRNARAVC 120

Query: 121 LFTIGDGITSTLTFAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSF 178
           +FTIGDGIT T+T  AACASAGITVLI ND+  C+ENHC  FETATA+AFISWF   PS 
Sbjct: 121 IFTIGDGITGTITLGAACASAGITVLIGNDLNICAENHCASFETATALAFISWFALAPSC 180

[Close]

BLAST of Carg23711 vs. ExPASy TrEMBL
Match: A0A6J1HME3 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111464894 PE=3 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 2.9e-91
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT 60
           MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT
Sbjct: 1   MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT 60

Query: 61  SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT 120
           SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT
Sbjct: 61  SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT 120

Query: 121 FAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFWSLASR 178
           FAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFWSLASR
Sbjct: 121 FAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFWSLASR 177

[Close]

BLAST of Carg23711 vs. ExPASy TrEMBL
Match: A0A6J1HYU4 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111469335 PE=3 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 8.5e-91
Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT 60
           MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT
Sbjct: 1   MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT 60

Query: 61  SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT 120
           SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT
Sbjct: 61  SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT 120

Query: 121 FAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFWSLASR 178
           FAAACASAGITVLIDNDIGSCSENHCVQFETATA+AFISWFTALPSFFMNFWSLASR
Sbjct: 121 FAAACASAGITVLIDNDIGSCSENHCVQFETATAIAFISWFTALPSFFMNFWSLASR 177

[Close]

BLAST of Carg23711 vs. ExPASy TrEMBL
Match: A0A5D3C7L3 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold594G00260 PE=3 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.5e-87
Identity = 169/177 (95.48%), Postives = 173/177 (97.74%), Query Frame = 0


Query: 1   MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT 60
           MNVSHATVHP EDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQF FAAAAL VMATT
Sbjct: 1   MNVSHATVHPVEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFFFAAAALGVMATT 60

Query: 61  SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT 120
           SDFPSVTAFCYLVAAAGLQSLWSL LAFID+YALLVKRSLQNCRIVSLFTIGDGITSTLT
Sbjct: 61  SDFPSVTAFCYLVAAAGLQSLWSLLLAFIDMYALLVKRSLQNCRIVSLFTIGDGITSTLT 120

Query: 121 FAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFWSLASR 178
           FAAACASAGITVLIDND+GSCS+NHCVQFETATAMAFISWFTALPSFF+NFWSLASR
Sbjct: 121 FAAACASAGITVLIDNDLGSCSKNHCVQFETATAMAFISWFTALPSFFINFWSLASR 177

[Close]

BLAST of Carg23711 vs. ExPASy TrEMBL
Match: A0A1S3CIU9 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500904 PE=3 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.5e-87
Identity = 169/177 (95.48%), Postives = 173/177 (97.74%), Query Frame = 0


Query: 1   MNVSHATVHPAEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMATT 60
           MNVSHATVHP EDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQF FAAAAL VMATT
Sbjct: 1   MNVSHATVHPVEDPPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFFFAAAALGVMATT 60

Query: 61  SDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLT 120
           SDFPSVTAFCYLVAAAGLQSLWSL LAFID+YALLVKRSLQNCRIVSLFTIGDGITSTLT
Sbjct: 61  SDFPSVTAFCYLVAAAGLQSLWSLLLAFIDMYALLVKRSLQNCRIVSLFTIGDGITSTLT 120

Query: 121 FAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFWSLASR 178
           FAAACASAGITVLIDND+GSCS+NHCVQFETATAMAFISWFTALPSFF+NFWSLASR
Sbjct: 121 FAAACASAGITVLIDNDLGSCSKNHCVQFETATAMAFISWFTALPSFFINFWSLASR 177

[Close]

BLAST of Carg23711 vs. ExPASy TrEMBL
Match: A0A6J1DFD4 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111020558 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.6e-81
Identity = 162/178 (91.01%), Postives = 169/178 (94.94%), Query Frame = 0


Query: 1   MNVSHATVHPAEDPPTTDGA-NAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMAT 60
           MNVSHATVHP EDPPTTDGA +AP +RMKDMEGMPGTRGGLALR  QF FAAAA+VVMAT
Sbjct: 1   MNVSHATVHPVEDPPTTDGADDAPRLRMKDMEGMPGTRGGLALRLAQFAFAAAAVVVMAT 60

Query: 61  TSDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITSTL 120
           TSDFPSVTAFCYLVAAA LQSLWSL LAF+DIYALLVKRSLQN RIVSLFTIGDGITSTL
Sbjct: 61  TSDFPSVTAFCYLVAAASLQSLWSLSLAFVDIYALLVKRSLQNRRIVSLFTIGDGITSTL 120

Query: 121 TFAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFWSLASR 178
           TFAAACASAGITVLIDND+GSC++NHCVQFETATAMAFISWFTALPSFFMNFWSLASR
Sbjct: 121 TFAAACASAGITVLIDNDLGSCNQNHCVQFETATAMAFISWFTALPSFFMNFWSLASR 178

[Close]

BLAST of Carg23711 vs. TAIR 10
Match: AT2G28370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 280.0 bits (715), Expect = 1.3e-75
Identity = 144/179 (80.45%), Postives = 158/179 (88.27%), Query Frame = 0


Query: 1   MNVSHATVHPAEDPP--TTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVMA 60
           MNVSHA+VHP EDPP   T+  N P VRM DMEGMPGT  GLALRFFQFLFAAAAL VMA
Sbjct: 1   MNVSHASVHPVEDPPAAATEVENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVMA 60

Query: 61  TTSDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITST 120
           +TSDFPSVTAFCYLVAA GLQSLWSL LA +D+YA++VKRSLQN R+VSLF IGDG+TST
Sbjct: 61  STSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTST 120

Query: 121 LTFAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFWSLASR 178
           LTFAAACASAGITVLIDND+ SC++NHCVQFET+TA+AFISWF ALPSF  NFWSLASR
Sbjct: 121 LTFAAACASAGITVLIDNDLNSCAQNHCVQFETSTALAFISWFAALPSFLFNFWSLASR 179

[Close]

BLAST of Carg23711 vs. TAIR 10
Match: AT2G37200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 209.5 bits (532), Expect = 2.2e-54
Identity = 115/179 (64.25%), Postives = 132/179 (73.74%), Query Frame = 0


Query: 1   MNVSHATVHPAED---PPTTDGANAPMVRMKDMEGMPGTRGGLALRFFQFLFAAAALVVM 60
           MNVS   +HP +     PT    + P VRMKD++GMPGT GGL LR  QF+ A  ++ VM
Sbjct: 2   MNVSRPAIHPVDALPVAPTAGAIDRPPVRMKDVQGMPGTTGGLILRLSQFVPALISVSVM 61

Query: 61  ATTSDFPSVTAFCYLVAAAGLQSLWSLFLAFIDIYALLVKRSLQNCRIVSLFTIGDGITS 120
            TTSDF S TAFC LV A  LQSLWSL L  ID YALLV+RSL+N  +V  FTIGDG+TS
Sbjct: 62  VTTSDFRSATAFCCLVLAVSLQSLWSLSLFIIDAYALLVRRSLRNHSVVQCFTIGDGVTS 121

Query: 121 TLTFAAACASAGITVLIDNDIGSCSENHCVQFETATAMAFISWFTALPSFFMNFWSLAS 177
           TLTFAAA ASAGITVLI ND+G C+ NHC +FETATAMAFISWF   PSF +NFWSLA+
Sbjct: 122 TLTFAAASASAGITVLI-NDLGQCNVNHCTRFETATAMAFISWFAVSPSFILNFWSLAT 179

[Close]

BLAST of Carg23711 vs. TAIR 10
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 130.2 bits (326), Expect = 1.7e-30
Identity = 74/151 (49.01%), Postives = 99/151 (65.56%), Query Frame = 0


Query: 27  MKDMEGMPGTRGGLALRFFQFLFAAAALVVMATTSDFPSVTAFCYLVAAAGLQSLWSLFL 86
           M D+ G PGT  GL LR  Q +FAA ++  M T+  F S TAFCYL+AA GLQ +WS  L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 87  AFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLTFAAACASAGITVLIDNDIGSCS-ENH 146
           A +D +AL+ K++L +  +VSLF +GD +TSTL+ A A +SAGITVL   D+GSCS E  
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120

Query: 147 CVQFETATAMAFISWFTALPSFFMNFWSLAS 177
           C +++ + A+AF+ W T   S     W LAS
Sbjct: 121 CWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151

[Close]

BLAST of Carg23711 vs. TAIR 10
Match: AT3G53850.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 128.3 bits (321), Expect = 6.3e-30
Identity = 73/153 (47.71%), Postives = 100/153 (65.36%), Query Frame = 0


Query: 27  MKDMEGMPGTRGGLALRFFQFLFAAAALVVMATTSDFPSVTAFCYLVAAAGLQSLWSLFL 86
           MK + G PGT  GL LR  Q   AAA++ VM +  +F   TAFCYL+A+ GLQ LWS  L
Sbjct: 1   MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGL 60

Query: 87  AFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLTFAAACASAGITVLIDNDIGSC---SE 146
           A +D+YAL  K+ LQN  +VSLF +GD +T+ L+ AAAC+SAG+ VL + DI  C   S+
Sbjct: 61  ACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQ 120

Query: 147 NHCVQFETATAMAFISWFTALPSFFMNFWSLAS 177
             C+++E A A++F++W     S  + FW LAS
Sbjct: 121 YPCLRYEVAVALSFVTWIQIAVSSHVTFWILAS 153

[Close]

BLAST of Carg23711 vs. TAIR 10
Match: AT5G02060.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-27
Identity = 68/151 (45.03%), Postives = 95/151 (62.91%), Query Frame = 0


Query: 27  MKDMEGMPGTRGGLALRFFQFLFAAAALVVMATTSDFPSVTAFCYLVAAAGLQSLWSLFL 86
           MK M G PGT  GL LR  Q   AAA++ VM ++ DF + TAFC+LVA+ GLQ +WS  L
Sbjct: 1   MKKMIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGL 60

Query: 87  AFIDIYALLVKRSLQNCRIVSLFTIGDGITSTLTFAAACASAGITVLIDNDIGSCSEN-- 146
           A +D+YA+  K  L++  ++SLFT+GD +T+ L  AAAC+SAG+TVL   D   C +   
Sbjct: 61  ACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKDTEFCRQQPA 120

Query: 147 -HCVQFETATAMAFISWFTALPSFFMNFWSL 175
             C +F+ +  ++F +WF A  S    FW L
Sbjct: 121 LSCDRFQISVGLSFFNWFLAAISSHTMFWIL 151

The following BLAST results are available for this feature:

BLAST of Carg23711 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964943.1	6.0e-91	100.00	CASP-like protein 5A2 [Cucurbita moschata] >XP_023519769.1 CASP-like protein 5A2...	[more]
XP_022970342.1	1.7e-90	99.44	CASP-like protein 5A2 [Cucurbita maxima]	[more]
KAG6583581.1	2.1e-88	100.00	CASP-like protein 5A2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_008462581.1	5.3e-87	95.48	PREDICTED: CASP-like protein 5A2 [Cucumis melo] >KAA0041694.1 CASP-like protein ...	[more]
XP_038894237.1	1.3e-85	93.22	CASP-like protein 5A2 [Benincasa hispida]	[more]

BLAST of Carg23711 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKN3	1.8e-74	80.45	CASP-like protein 5A2 OS=Arabidopsis thaliana OX=3702 GN=At2g28370 PE=2 SV=1	[more]
P0DI70	1.4e-58	67.80	CASP-like protein 5A1 OS=Ginkgo biloba OX=3311 GN=gba_locus_10451 PE=3 SV=1	[more]
Q10Q78	2.4e-58	67.80	CASP-like protein 5A1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0206600 P...	[more]
P0DI68	5.3e-58	66.29	CASP-like protein 5A1 OS=Brachypodium distachyon OX=15368 PE=2 SV=1	[more]
B4FNS3	7.2e-55	63.16	CASP-like protein 5A3 OS=Zea mays OX=4577 PE=2 SV=1	[more]

BLAST of Carg23711 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HME3	2.9e-91	100.00	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111464894 PE=3 SV=1	[more]
A0A6J1HYU4	8.5e-91	99.44	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111469335 PE=3 SV=1	[more]
A0A5D3C7L3	2.5e-87	95.48	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold594G00...	[more]
A0A1S3CIU9	2.5e-87	95.48	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500904 PE=3 SV=1	[more]
A0A6J1DFD4	3.6e-81	91.01	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111020558 PE=3 SV=1	[more]

BLAST of Carg23711 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28370.1	1.3e-75	80.45	Uncharacterised protein family (UPF0497)	[more]
AT2G37200.1	2.2e-54	64.25	Uncharacterised protein family (UPF0497)	[more]
AT3G23200.1	1.7e-30	49.01	Uncharacterised protein family (UPF0497)	[more]
AT3G53850.1	6.3e-30	47.71	Uncharacterised protein family (UPF0497)	[more]
AT5G02060.1	1.7e-27	45.03	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 34..161 e-value: 6.0E-27 score: 94.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR32021:SF16	CASP-LIKE PROTEIN 5A2	coord: 14..177
IPR045009	CASP-like protein 5	PANTHER	PTHR32021	CASP-LIKE PROTEIN 5B3	coord: 14..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23711-RA	Carg23711-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane