Carg23700 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg23700
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLEA_2 domain-containing protein
LocationCarg_Chr13: 2267882 .. 2268743 (+)
RNA-Seq ExpressionCarg23700
SyntenyCarg23700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGAACATGAGGAGCAATACACAAGAAGAAGCATCATCATCAACAACCTCCATCATTGAGGCACCAAAACCAAGCTCCTATGGACAACAACATGGGACAGCAAAACGCACCAAGCTCATGAGAATCATAGGACGAAGCTTGTTGGCTGTCATGTTCCTTGTCGGTCTTGCTATTGTCATTTGTTGGCTTGTTGTCTTCCCCAAAACCCCAAATCTTATATTGGAAAATGGCCATGTAACACCCCATAGCTTAACTGATAGAAAGCTCAATGCCTCCATATCTTTCACCATCAAAAGCTATAACCCTAACAAAAGAGCATCCATTCATATGGATTCTATGAAGATGACACTTGATGATATGGGTCAGACGTTTATCACCACGATCCCTACGTTCACGCAACCGCCCGGAAACCAAACCTTCTTGAACCCCACTGTCGAAGTCAACTTCATATACCCTTTCGGGCAAATGAAAGATTTGATGCTATCAGATGGGTTGAATCCCGAACTTCACTTCTCAGCTCATGTCAGGTACAAACATTTAACTTTTAAGATACATATATAACATATCACTGTATCATCAAATTTAGCTTCCATCTGATTTTTGTCTCGCTCTATTTCTATCAGTTACATTGTCGAAAAATGGGCATCGAAACGTCGGTCGCTAGAGATCTATTGTGATCGAGTCAGGCTTAAGATCAATGGTTCAACACCTTTCGATAATACAAAATGCAAAGTGGATCTTTGAGATTTGATCCGAGTTTGTTCTTAGTTGCATAATTCCAAAGATTTGTAACTCCAAGTTTCATTTTTTTTTCTTTTTTGAATTTAATTGTTTCTCTAAAGATATATAAAGTAAAAGAAT

mRNA sequence

GAAGAACATGAGGAGCAATACACAAGAAGAAGCATCATCATCAACAACCTCCATCATTGAGGCACCAAAACCAAGCTCCTATGGACAACAACATGGGACAGCAAAACGCACCAAGCTCATGAGAATCATAGGACGAAGCTTGTTGGCTGTCATGTTCCTTGTCGGTCTTGCTATTGTCATTTGTTGGCTTGTTGTCTTCCCCAAAACCCCAAATCTTATATTGGAAAATGGCCATGTAACACCCCATAGCTTAACTGATAGAAAGCTCAATGCCTCCATATCTTTCACCATCAAAAGCTATAACCCTAACAAAAGAGCATCCATTCATATGGATTCTATGAAGATGACACTTGATGATATGGGTCAGACGTTTATCACCACGATCCCTACGTTCACGCAACCGCCCGGAAACCAAACCTTCTTGAACCCCACTGTCGAAGTCAACTTCATATACCCTTTCGGGCAAATGAAAGATTTGATGCTATCAGATGGGTTGAATCCCGAACTTCACTTCTCAGCTCATGTCAGTTACATTGTCGAAAAATGGGCATCGAAACGTCGGTCGCTAGAGATCTATTGTGATCGAGTCAGGCTTAAGATCAATGGTTCAACACCTTTCGATAATACAAAATGCAAAGTGGATCTTTGAGATTTGATCCGAGTTTGTTCTTAGTTGCATAATTCCAAAGATTTGTAACTCCAAGTTTCATTTTTTTTTCTTTTTTGAATTTAATTGTTTCTCTAAAGATATATAAAGTAAAAGAAT

Coding sequence (CDS)

ATGAGGAGCAATACACAAGAAGAAGCATCATCATCAACAACCTCCATCATTGAGGCACCAAAACCAAGCTCCTATGGACAACAACATGGGACAGCAAAACGCACCAAGCTCATGAGAATCATAGGACGAAGCTTGTTGGCTGTCATGTTCCTTGTCGGTCTTGCTATTGTCATTTGTTGGCTTGTTGTCTTCCCCAAAACCCCAAATCTTATATTGGAAAATGGCCATGTAACACCCCATAGCTTAACTGATAGAAAGCTCAATGCCTCCATATCTTTCACCATCAAAAGCTATAACCCTAACAAAAGAGCATCCATTCATATGGATTCTATGAAGATGACACTTGATGATATGGGTCAGACGTTTATCACCACGATCCCTACGTTCACGCAACCGCCCGGAAACCAAACCTTCTTGAACCCCACTGTCGAAGTCAACTTCATATACCCTTTCGGGCAAATGAAAGATTTGATGCTATCAGATGGGTTGAATCCCGAACTTCACTTCTCAGCTCATGTCAGTTACATTGTCGAAAAATGGGCATCGAAACGTCGGTCGCTAGAGATCTATTGTGATCGAGTCAGGCTTAAGATCAATGGTTCAACACCTTTCGATAATACAAAATGCAAAGTGGATCTTTGA

Protein sequence

MRSNTQEEASSSTTSIIEAPKPSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFITTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKWASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL
Homology
BLAST of Carg23700 vs. NCBI nr
Match: XP_022964992.1 (uncharacterized protein At1g08160-like [Cucurbita moschata] >KAG6583594.1 NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019294.1 NDR1/HIN1-like protein 10 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 425.6 bits (1093), Expect = 2.5e-115
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0

Query: 1   MRSNTQEEASSSTTSIIEAPKPSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW 60
           MRSNTQEEASSSTTSIIEAPKPSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW
Sbjct: 1   MRSNTQEEASSSTTSIIEAPKPSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW 60

Query: 61  LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ 120
           LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ
Sbjct: 61  LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ 120

Query: 121 TFITTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKW 180
           TFITTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKW
Sbjct: 121 TFITTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKW 180

Query: 181 ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 214
           ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL
Sbjct: 181 ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 213

BLAST of Carg23700 vs. NCBI nr
Match: XP_023520091.1 (uncharacterized protein At1g08160-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 419.1 bits (1076), Expect = 2.3e-113
Identity = 210/213 (98.59%), Postives = 210/213 (98.59%), Query Frame = 0

Query: 1   MRSNTQEEASSSTTSIIEAPKPSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW 60
           MRSNTQ EASSSTTSIIEAPKPSSYG QHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW
Sbjct: 1   MRSNTQGEASSSTTSIIEAPKPSSYGHQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW 60

Query: 61  LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ 120
           LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ
Sbjct: 61  LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ 120

Query: 121 TFITTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKW 180
           TF TTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKW
Sbjct: 121 TFTTTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKW 180

Query: 181 ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 214
           ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL
Sbjct: 181 ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 213

BLAST of Carg23700 vs. NCBI nr
Match: XP_022970341.1 (uncharacterized protein At1g08160-like [Cucurbita maxima])

HSP 1 Score: 407.5 bits (1046), Expect = 7.0e-110
Identity = 205/213 (96.24%), Postives = 208/213 (97.65%), Query Frame = 0

Query: 1   MRSNTQEEASSSTTSIIEAPKPSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW 60
           MR+NTQ EASSS+TSIIEAPKPS Y QQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW
Sbjct: 1   MRNNTQGEASSSSTSIIEAPKPSYYAQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW 60

Query: 61  LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ 120
           LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ
Sbjct: 61  LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ 120

Query: 121 TFITTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKW 180
           TFITTIPTFTQ PGNQTFL PTVEVNFIYPFGQMKDLMLS+GLNPELHFSAHVSYIVEKW
Sbjct: 121 TFITTIPTFTQLPGNQTFLTPTVEVNFIYPFGQMKDLMLSNGLNPELHFSAHVSYIVEKW 180

Query: 181 ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 214
           ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL
Sbjct: 181 ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 213

BLAST of Carg23700 vs. NCBI nr
Match: XP_038895440.1 (uncharacterized protein LOC120083674 [Benincasa hispida])

HSP 1 Score: 276.9 bits (707), Expect = 1.4e-70
Identity = 138/214 (64.49%), Postives = 166/214 (77.57%), Query Frame = 0

Query: 1   MRSNT-QEEASSSTTSIIEAPKPSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVIC 60
           MR  T Q EASSS+       K SSY Q+HGTAKRTKL+RI GRSLL +M LVG+ I+IC
Sbjct: 1   MRGTTIQGEASSSS-------KESSYVQEHGTAKRTKLLRITGRSLLGIMILVGIGIIIC 60

Query: 61  WLVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMG 120
           WL+VFPKTPNL +E+G V PH LTDRKL A+I+FT+KSYNPNKRA+IHMDSM M + DMG
Sbjct: 61  WLIVFPKTPNLTVESGQVIPHRLTDRKLQATIAFTVKSYNPNKRATIHMDSMMMIVTDMG 120

Query: 121 QTFITTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEK 180
           QTF + IP FTQPPGNQT     ++ NFIYPFG MK+ + ++G++P+L FSA VSYI+++
Sbjct: 121 QTFASVIPNFTQPPGNQTVWTSAIQGNFIYPFGHMKEFVKAEGISPDLRFSAKVSYIMKR 180

Query: 181 WASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 214
           W SK R LEIYC  +RLK N STPFDN KC VDL
Sbjct: 181 WTSKARILEIYCGGLRLKFNDSTPFDNKKCTVDL 207

BLAST of Carg23700 vs. NCBI nr
Match: XP_008462326.1 (PREDICTED: uncharacterized protein LOC103500702 [Cucumis melo] >KAA0040683.1 protein YLS9-like [Cucumis melo var. makuwa] >TYK08768.1 protein YLS9-like [Cucumis melo var. makuwa])

HSP 1 Score: 259.6 bits (662), Expect = 2.3e-65
Identity = 126/209 (60.29%), Postives = 164/209 (78.47%), Query Frame = 0

Query: 5   TQEEASSSTTSIIEAPKPSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVF 64
           TQ E SSS+       K  SY ++HG AKRT+++RI GR+LL +M LV +A++ICWL+VF
Sbjct: 6   TQGEPSSSSA------KEISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVF 65

Query: 65  PKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFIT 124
           P+ P+LI+E G V PHSLTDRKLNA+I+FT+ SYNPNK+ASI MDSM+M + DMG +F +
Sbjct: 66  PRNPDLIVETGKVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWS 125

Query: 125 TIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKWASKR 184
            IP+FTQPP N+T LN T++ NFIYPFG MK+L+  +G++P+L FSA VSYI+E+W S+ 
Sbjct: 126 DIPSFTQPPKNKTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRG 185

Query: 185 RSLEIYCDRVRLKINGSTPFDNTKCKVDL 214
           R LE+YCD +RLK N ST FDN KCKVDL
Sbjct: 186 RLLEVYCDSLRLKFNDSTVFDNKKCKVDL 208

BLAST of Carg23700 vs. ExPASy Swiss-Prot
Match: Q8VZ13 (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.5e-10
Identity = 54/179 (30.17%), Postives = 84/179 (46.93%), Query Frame = 0

Query: 44  SLLAVMFLVGLAIVICWLVVFPKTPNLILENGHVTPHSL--TDRKLNASISFTIKSYNPN 103
           +L+ +  LVGLAI+I +L + PK     +E   V   ++   D  +NA  S+ IKSYNP 
Sbjct: 43  ALVLLGLLVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPE 102

Query: 104 KRASIHMDSMKMTLDDMGQTFI-TTIPTFTQPPGNQTFL-NPTVEVNFIYPFGQMKDLML 163
           K  S+   SM+++     Q+     I  F Q P N+T +    V  N        +DL  
Sbjct: 103 KHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRA 162

Query: 164 SDG---LNPELHFSAHVSYIVEKWASKRRSLEIYCDRVRLKINGST--PFDNTKCKVDL 214
                 +  E++ +A VSY    + S+RR+L+  C  V + +  S+   F    CK  L
Sbjct: 163 EKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTRL 221

BLAST of Carg23700 vs. ExPASy Swiss-Prot
Match: Q9SRN0 (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.1e-04
Identity = 32/106 (30.19%), Postives = 58/106 (54.72%), Query Frame = 0

Query: 27  QQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVFPKTPNLILENGHVTPHSLTDRK 86
           + HG ++R KL+R I  S++ V+F++ L I++ W ++ P  P  IL++  V   +++   
Sbjct: 5   ENHGHSRR-KLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNP 64

Query: 87  ---LNASISFTIKSYNPNKRASIHMDSMKM--TLDDMGQTFITTIP 128
              L ++   T+ S NPN +  I+ D + +  T      TF T+IP
Sbjct: 65  PNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIP 109

BLAST of Carg23700 vs. ExPASy TrEMBL
Match: A0A6J1HJ52 (uncharacterized protein At1g08160-like OS=Cucurbita moschata OX=3662 GN=LOC111464936 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.2e-115
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0

Query: 1   MRSNTQEEASSSTTSIIEAPKPSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW 60
           MRSNTQEEASSSTTSIIEAPKPSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW
Sbjct: 1   MRSNTQEEASSSTTSIIEAPKPSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW 60

Query: 61  LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ 120
           LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ
Sbjct: 61  LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ 120

Query: 121 TFITTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKW 180
           TFITTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKW
Sbjct: 121 TFITTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKW 180

Query: 181 ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 214
           ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL
Sbjct: 181 ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 213

BLAST of Carg23700 vs. ExPASy TrEMBL
Match: A0A6J1I0B9 (uncharacterized protein At1g08160-like OS=Cucurbita maxima OX=3661 GN=LOC111469334 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 3.4e-110
Identity = 205/213 (96.24%), Postives = 208/213 (97.65%), Query Frame = 0

Query: 1   MRSNTQEEASSSTTSIIEAPKPSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW 60
           MR+NTQ EASSS+TSIIEAPKPS Y QQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW
Sbjct: 1   MRNNTQGEASSSSTSIIEAPKPSYYAQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICW 60

Query: 61  LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ 120
           LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ
Sbjct: 61  LVVFPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQ 120

Query: 121 TFITTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKW 180
           TFITTIPTFTQ PGNQTFL PTVEVNFIYPFGQMKDLMLS+GLNPELHFSAHVSYIVEKW
Sbjct: 121 TFITTIPTFTQLPGNQTFLTPTVEVNFIYPFGQMKDLMLSNGLNPELHFSAHVSYIVEKW 180

Query: 181 ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 214
           ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL
Sbjct: 181 ASKRRSLEIYCDRVRLKINGSTPFDNTKCKVDL 213

BLAST of Carg23700 vs. ExPASy TrEMBL
Match: A0A5D3CC54 (Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold534G00190 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.1e-65
Identity = 126/209 (60.29%), Postives = 164/209 (78.47%), Query Frame = 0

Query: 5   TQEEASSSTTSIIEAPKPSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVF 64
           TQ E SSS+       K  SY ++HG AKRT+++RI GR+LL +M LV +A++ICWL+VF
Sbjct: 6   TQGEPSSSSA------KEISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVF 65

Query: 65  PKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFIT 124
           P+ P+LI+E G V PHSLTDRKLNA+I+FT+ SYNPNK+ASI MDSM+M + DMG +F +
Sbjct: 66  PRNPDLIVETGKVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWS 125

Query: 125 TIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKWASKR 184
            IP+FTQPP N+T LN T++ NFIYPFG MK+L+  +G++P+L FSA VSYI+E+W S+ 
Sbjct: 126 DIPSFTQPPKNKTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRG 185

Query: 185 RSLEIYCDRVRLKINGSTPFDNTKCKVDL 214
           R LE+YCD +RLK N ST FDN KCKVDL
Sbjct: 186 RLLEVYCDSLRLKFNDSTVFDNKKCKVDL 208

BLAST of Carg23700 vs. ExPASy TrEMBL
Match: A0A1S3CGQ5 (uncharacterized protein LOC103500702 OS=Cucumis melo OX=3656 GN=LOC103500702 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.1e-65
Identity = 126/209 (60.29%), Postives = 164/209 (78.47%), Query Frame = 0

Query: 5   TQEEASSSTTSIIEAPKPSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVF 64
           TQ E SSS+       K  SY ++HG AKRT+++RI GR+LL +M LV +A++ICWL+VF
Sbjct: 6   TQGEPSSSSA------KEISYVEKHGAAKRTRVLRITGRTLLGLMILVAIAMIICWLIVF 65

Query: 65  PKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFIT 124
           P+ P+LI+E G V PHSLTDRKLNA+I+FT+ SYNPNK+ASI MDSM+M + DMG +F +
Sbjct: 66  PRNPDLIVETGKVIPHSLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVTDMGLSFWS 125

Query: 125 TIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKWASKR 184
            IP+FTQPP N+T LN T++ NFIYPFG MK+L+  +G++P+L FSA VSYI+E+W S+ 
Sbjct: 126 DIPSFTQPPKNKTVLNSTIQGNFIYPFGHMKELVKLEGISPDLRFSAKVSYIMERWTSRG 185

Query: 185 RSLEIYCDRVRLKINGSTPFDNTKCKVDL 214
           R LE+YCD +RLK N ST FDN KCKVDL
Sbjct: 186 RLLEVYCDSLRLKFNDSTVFDNKKCKVDL 208

BLAST of Carg23700 vs. ExPASy TrEMBL
Match: A0A0A0LSV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G134270 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.5e-65
Identity = 120/193 (62.18%), Postives = 156/193 (80.83%), Query Frame = 0

Query: 21  KPSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVFPKTPNLILENGHVTPH 80
           K  SY  +HGTAKRT+++RI GR+LL +M LV +A++ICWL+VFP+ P++I+E G V PH
Sbjct: 20  KEMSYVIKHGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPH 79

Query: 81  SLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFITTIPTFTQPPGNQTFLN 140
           SLTDRKLNA+I+FT+ SYNPNK+ASI MDSM+M + DMG +F + IP+FTQPP N+T L 
Sbjct: 80  SLTDRKLNATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKNKTVLT 139

Query: 141 PTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKWASKRRSLEIYCDRVRLKING 200
            T++ NFIYPFG MK+LM  +G++PEL FSA VSYI+E+W S+ R +E+YCD +RLK N 
Sbjct: 140 STIQGNFIYPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFND 199

Query: 201 STPFDNTKCKVDL 214
           ST FDN KCKVDL
Sbjct: 200 STVFDNKKCKVDL 212

BLAST of Carg23700 vs. TAIR 10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 73.9 bits (180), Expect = 1.7e-13
Identity = 53/187 (28.34%), Postives = 88/187 (47.06%), Query Frame = 0

Query: 33  KRTKLMRIIGRSLLAVMFLVGLAIVICWLVVFPKTPNLILENGHVTPHSLT-DRKLNASI 92
           +R  L+  I   +L ++F+  +  +I WL   PK     +EN  V   +LT D  ++A+ 
Sbjct: 21  RRPSLICYIFLVILTLIFMAAVGFLITWLETKPKKLRYTVENASVQNFNLTNDNHMSATF 80

Query: 93  SFTIKSYNPNKRASIHMDSMKMTLDDMGQTF-ITTIPTFTQPPGNQTFLNPT-VEVNFIY 152
            FTI+S+NPN R S++  S+++ +    QT    T+  F QP  N   ++ T +  N   
Sbjct: 81  QFTIQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVEPFHQPRMNVKQIDETLIAENVAV 140

Query: 153 PFGQMKDLMLSDGLNP---ELHFSAHVSYIVEKWASKRRSLEIYCDRVRLKINGSTPFDN 212
                KDL   + L     E+   A V + V  W S  R+ +I C  V + ++      N
Sbjct: 141 SKSNGKDLRSQNSLGKIGFEVFVKARVRFKVGIWKSSHRTAKIKCSHVTVSLSQPNKSQN 200

Query: 213 TKCKVDL 214
           + C  D+
Sbjct: 201 SSCDADI 207

BLAST of Carg23700 vs. TAIR 10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 65.5 bits (158), Expect = 6.0e-11
Identity = 54/179 (30.17%), Postives = 84/179 (46.93%), Query Frame = 0

Query: 44  SLLAVMFLVGLAIVICWLVVFPKTPNLILENGHVTPHSL--TDRKLNASISFTIKSYNPN 103
           +L+ +  LVGLAI+I +L + PK     +E   V   ++   D  +NA  S+ IKSYNP 
Sbjct: 43  ALVLLGLLVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPE 102

Query: 104 KRASIHMDSMKMTLDDMGQTFI-TTIPTFTQPPGNQTFL-NPTVEVNFIYPFGQMKDLML 163
           K  S+   SM+++     Q+     I  F Q P N+T +    V  N        +DL  
Sbjct: 103 KHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNARDLRA 162

Query: 164 SDG---LNPELHFSAHVSYIVEKWASKRRSLEIYCDRVRLKINGST--PFDNTKCKVDL 214
                 +  E++ +A VSY    + S+RR+L+  C  V + +  S+   F    CK  L
Sbjct: 163 EKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSSLDGFQRVLCKTRL 221

BLAST of Carg23700 vs. TAIR 10
Match: AT3G11660.1 (NDR1/HIN1-like 1 )

HSP 1 Score: 48.5 bits (114), Expect = 7.6e-06
Identity = 32/106 (30.19%), Postives = 58/106 (54.72%), Query Frame = 0

Query: 27  QQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVFPKTPNLILENGHVTPHSLTDRK 86
           + HG ++R KL+R I  S++ V+F++ L I++ W ++ P  P  IL++  V   +++   
Sbjct: 5   ENHGHSRR-KLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSGNP 64

Query: 87  ---LNASISFTIKSYNPNKRASIHMDSMKM--TLDDMGQTFITTIP 128
              L ++   T+ S NPN +  I+ D + +  T      TF T+IP
Sbjct: 65  PNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIP 109

BLAST of Carg23700 vs. TAIR 10
Match: AT4G01410.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 45.4 bits (106), Expect = 6.5e-05
Identity = 29/107 (27.10%), Postives = 51/107 (47.66%), Query Frame = 0

Query: 22  PSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVFPKTPNLILENGHVTPHS 81
           P SY ++ G         I G ++  ++ ++G+  +I WLV  P  P L +    +   +
Sbjct: 26  PESYSKEGGGGGGDARRAICG-AIFTILVILGIIALILWLVYRPHKPRLTVVGAAIYDLN 85

Query: 82  LTDRKL-NASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFITTIP 128
            T   L + S+ F++ + NPN+R SIH D + M +    Q     +P
Sbjct: 86  FTAPPLISTSVQFSVLARNPNRRVSIHYDKLSMYVTYKDQIITPPLP 131

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022964992.12.5e-115100.00uncharacterized protein At1g08160-like [Cucurbita moschata] >KAG6583594.1 NDR1/H... [more]
XP_023520091.12.3e-11398.59uncharacterized protein At1g08160-like [Cucurbita pepo subsp. pepo][more]
XP_022970341.17.0e-11096.24uncharacterized protein At1g08160-like [Cucurbita maxima][more]
XP_038895440.11.4e-7064.49uncharacterized protein LOC120083674 [Benincasa hispida][more]
XP_008462326.12.3e-6560.29PREDICTED: uncharacterized protein LOC103500702 [Cucumis melo] >KAA0040683.1 pro... [more]
Match NameE-valueIdentityDescription
Q8VZ138.5e-1030.17Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 P... [more]
Q9SRN01.1e-0430.19NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1HJ521.2e-115100.00uncharacterized protein At1g08160-like OS=Cucurbita moschata OX=3662 GN=LOC11146... [more]
A0A6J1I0B93.4e-11096.24uncharacterized protein At1g08160-like OS=Cucurbita maxima OX=3661 GN=LOC1114693... [more]
A0A5D3CC541.1e-6560.29Protein YLS9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold534G00... [more]
A0A1S3CGQ51.1e-6560.29uncharacterized protein LOC103500702 OS=Cucumis melo OX=3656 GN=LOC103500702 PE=... [more]
A0A0A0LSV02.5e-6562.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G134270 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G22870.11.7e-1328.34Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT1G08160.16.0e-1130.17Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT3G11660.17.6e-0630.19NDR1/HIN1-like 1 [more]
AT4G01410.16.5e-0527.10Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 94..188
e-value: 1.8E-9
score: 38.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availablePANTHERPTHR31852:SF5GB|AAF18257.1coord: 29..212
NoneNo IPR availablePANTHERPTHR31852LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 29..212
NoneNo IPR availableSUPERFAMILY117070LEA14-likecoord: 50..176

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg23700-RACarg23700-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane