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Carg23696 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGAAAAGCTCAAAACCCATTTAATGTTCACAACCAGAGAGCTCGTATCGCTCTCCAATGGCGCTCTATCCATCCCTACAACTCATTCGATTCCCTCCTCAACCACTCTCCTCGTCCTCTCGCCACCTTCTCATTTCTGACCTCGGCTCCGTATCGCGCTTCTTCCGATCTCCATGGCTTTCCTCTTTGCCTCCGTCGCGGAAGTGCAGGATGATTTTATCTTCCAGGACCAAGTGTTTCTCCATGTCCACTGAGGAGGATCAGTGGAGTGAATCGGAAGCGTTGATGTCCGATGTTGACGAAGGGGGAGATCGTGAGGATGATATTGGTGTTCAGCAAGAAAGCTCTGTGGTCTCTGCTGCTTCTGCGCAGAGGATTTCTTCCTCGTCGCCGAGTGATTATCTGTCGCTTGCGATTCGTGAGTCGGTTTATGAGGTCTGTTGCTTCAAAACGTTTTTTTATTTTATTTTTATTTTTACGTGAATTGGTATGTGTTTGCTGCTACTTTCAATTCCGCAGGGAATTTATTTCTCGTCTTTGTTTTTTTGTTGTTGAATTAGAGTAGAAAGTTTTAACATCGAAACGAAAATTTGAATCAAGTCAATTATTGGTTCATGAGGGAGATTAGCTAGGGAATGTTGAGTCTGCCAATGCCTATTCGTCGTCAGTTGCTAATAGGGGCAATTTTGTTCTTGATGTTGAAGAACGTTGAGTAGTAATAGTAAGACTTCCTTGCATCCATAAGTGATGTTCCAGTTATGATGCTATGTTGCAATAGGTTTAATGTTAAAATTTTAAACAGTTTTAAGTGCATCTAATCTTGTAGTAATTTAATGTTTTGTAAATATTAAAGACATTAGCGGCCTACAACCTCTTGTTTTATACTTTTTTTTGGAGTTCATTCGAACTTCTAACCTGTTTCTAAGGTACACCAACGTTTGTCAGGGGACAAATCTTATTTCATATGCTCTGCATAAATCATACCCAATGTTCATCTTTATTGACAACTTAGGTATTAGAGGTTAAAGCCAATGGTGCCGTATCTACTAGGAAGATAAACAGACGTCAGCTGTTGAAGTCAAGTGGTGAGTAAATCTTATCAGAACTTTCTGGTTCTCTTTTCGATGTTTAGCTTCTAGATGTATATGCCGTTGAAAACTTTTAGTCTGCATTGACTTCTGTGCACTTTCTTTCTGGAATGTAAAATGCTACCGGATGTCTCACTGTTGGATTTTTACCTCTTCACATATAGATAACCGTGGGATGACAAATAATATGATTTGCTACTTTTTGTTAAGAAACTATATATGTTTTCCTTTCATTTTTTTCTCTTGTGGATATTCTTTTAACTATCAGGGCTTCGTCCACGTGATGTCCGGAGTGTTGATCCATCTTTATTTTTGACAAACTCAATGCCTACATTACTGGTATGTTGATTTCCACCATTTTAGTTCCCGATTGTATCTTTTAGATTATAAGCTTTTTATGTTGAAGTGTTAGCATTTGGCATAAGCATATGAAATTAAGAAATTAAAGTCGATAAATGATACTAGCAATATTTTTTTTGTGGTTCAAATCCCAGGTCCGTGAAAATGCTATTTTACTTAATCTGGGATCGTTGCGAGCAATAGCTATGCCGGACTGTGTCCTCATATTCGATTATAACCGGTATCCATCTAACTTGGAACTGGTGCCATATTCTTTCTCTCGTACAACATTTCTGACATTGCAATTCTTTTTGCATGATGGTGATCATCTTCAGTCCAGGAGGACAGGCTTTTATTGAATCATTGTTGCCACGATTGAACCCAAAAAGCATGAATGGAGTGCCAGCAATGCCATTTGAACTTGAGGTTAGTAATTCTTGTAAATATAGTACTTTACATCATATAGTTAGAGTTGGCAGATGCAAGCAAAATTAGCGTATGGACTGCGGTACTTCAGTACATCTACGGTAAGAAGTTTCCTAATCAGAATTTGGTCCCCAGGAAGCTTACTGCCAGAAGCAATGAAAAATTACCACTAACTGCTTTTGAGAATTCTTATACCATTCTGTGA AGAAAAGCTCAAAACCCATTTAATGTTCACAACCAGAGAGCTCGTATCGCTCTCCAATGGCGCTCTATCCATCCCTACAACTCATTCGATTCCCTCCTCAACCACTCTCCTCGTCCTCTCGCCACCTTCTCATTTCTGACCTCGGCTCCGTATCGCGCTTCTTCCGATCTCCATGGCTTTCCTCTTTGCCTCCGTCGCGGAAGTGCAGGATGATTTTATCTTCCAGGACCAAGTGTTTCTCCATGTCCACTGAGGAGGATCAGTGGAGTGAATCGGAAGCGTTGATGTCCGATGTTGACGAAGGGGGAGATCGTGAGGATGATATTGGTGTTCAGCAAGAAAGCTCTGTGGTCTCTGCTGCTTCTGCGCAGAGGATTTCTTCCTCGTCGCCGAGTGATTATCTGTCGCTTGCGATTCGTGAGTCGGTTTATGAGGTATTAGAGGTTAAAGCCAATGGTGCCGTATCTACTAGGAAGATAAACAGACGTCAGCTGTTGAAGTCAAGTGGGCTTCGTCCACGTGATGTCCGGAGTGTTGATCCATCTTTATTTTTGACAAACTCAATGCCTACATTACTGGTCCGTGAAAATGCTATTTTACTTAATCTGGGATCGTTGCGAGCAATAGCTATGCCGGACTGTGTCCTCATATTCGATTATAACCGTCCAGGAGGACAGGCTTTTATTGAATCATTGTTGCCACGATTGAACCCAAAAAGCATGAATGGAGTGCCAGCAATGCCATTTGAACTTGAGTACATCTACGGTAAGAAGTTTCCTAATCAGAATTTGGTCCCCAGGAAGCTTACTGCCAGAAGCAATGAAAAATTACCACTAACTGCTTTTGAGAATTCTTATACCATTCTGTGA ATGGCGCTCTATCCATCCCTACAACTCATTCGATTCCCTCCTCAACCACTCTCCTCGTCCTCTCGCCACCTTCTCATTTCTGACCTCGGCTCCGTATCGCGCTTCTTCCGATCTCCATGGCTTTCCTCTTTGCCTCCGTCGCGGAAGTGCAGGATGATTTTATCTTCCAGGACCAAGTGTTTCTCCATGTCCACTGAGGAGGATCAGTGGAGTGAATCGGAAGCGTTGATGTCCGATGTTGACGAAGGGGGAGATCGTGAGGATGATATTGGTGTTCAGCAAGAAAGCTCTGTGGTCTCTGCTGCTTCTGCGCAGAGGATTTCTTCCTCGTCGCCGAGTGATTATCTGTCGCTTGCGATTCGTGAGTCGGTTTATGAGGTATTAGAGGTTAAAGCCAATGGTGCCGTATCTACTAGGAAGATAAACAGACGTCAGCTGTTGAAGTCAAGTGGGCTTCGTCCACGTGATGTCCGGAGTGTTGATCCATCTTTATTTTTGACAAACTCAATGCCTACATTACTGGTCCGTGAAAATGCTATTTTACTTAATCTGGGATCGTTGCGAGCAATAGCTATGCCGGACTGTGTCCTCATATTCGATTATAACCGTCCAGGAGGACAGGCTTTTATTGAATCATTGTTGCCACGATTGAACCCAAAAAGCATGAATGGAGTGCCAGCAATGCCATTTGAACTTGAGTACATCTACGGTAAGAAGTTTCCTAATCAGAATTTGGTCCCCAGGAAGCTTACTGCCAGAAGCAATGAAAAATTACCACTAACTGCTTTTGAGAATTCTTATACCATTCTGTGA MALYPSLQLIRFPPQPLSSSSRHLLISDLGSVSRFFRSPWLSSLPPSRKCRMILSSRTKCFSMSTEEDQWSESEALMSDVDEGGDREDDIGVQQESSVVSAASAQRISSSSPSDYLSLAIRESVYEVLEVKANGAVSTRKINRRQLLKSSGLRPRDVRSVDPSLFLTNSMPTLLVRENAILLNLGSLRAIAMPDCVLIFDYNRPGGQAFIESLLPRLNPKSMNGVPAMPFELEYIYGKKFPNQNLVPRKLTARSNEKLPLTAFENSYTIL Homology
BLAST of Carg23696 vs. NCBI nr
Match: KAG7019298.1 (Magnesium transporter MRS2-11, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 517.7 bits (1332), Expect = 6.0e-143 Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0
BLAST of Carg23696 vs. NCBI nr
Match: XP_022964826.1 (magnesium transporter MRS2-11, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 441.0 bits (1133), Expect = 7.2e-120 Identity = 232/235 (98.72%), Postives = 233/235 (99.15%), Query Frame = 0
BLAST of Carg23696 vs. NCBI nr
Match: KAG6583597.1 (Magnesium transporter MRS2-11, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 441.0 bits (1133), Expect = 7.2e-120 Identity = 232/235 (98.72%), Postives = 233/235 (99.15%), Query Frame = 0
BLAST of Carg23696 vs. NCBI nr
Match: XP_022964732.1 (magnesium transporter MRS2-11, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 441.0 bits (1133), Expect = 7.2e-120 Identity = 232/235 (98.72%), Postives = 233/235 (99.15%), Query Frame = 0
BLAST of Carg23696 vs. NCBI nr
Match: XP_023519709.1 (magnesium transporter MRS2-11, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 438.3 bits (1126), Expect = 4.7e-119 Identity = 231/235 (98.30%), Postives = 232/235 (98.72%), Query Frame = 0
BLAST of Carg23696 vs. ExPASy Swiss-Prot
Match: Q058N4 (Magnesium transporter MRS2-11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MRS2-11 PE=1 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 2.7e-53 Identity = 132/227 (58.15%), Postives = 163/227 (71.81%), Query Frame = 0
BLAST of Carg23696 vs. ExPASy Swiss-Prot
Match: B8APK3 (Magnesium transporter MRS2-A, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=MRS2-A PE=3 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 7.9e-45 Identity = 103/166 (62.05%), Postives = 128/166 (77.11%), Query Frame = 0
BLAST of Carg23696 vs. ExPASy Swiss-Prot
Match: Q9AUK4 (Magnesium transporter MRS2-A, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=MRS2-A PE=2 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 7.9e-45 Identity = 103/166 (62.05%), Postives = 128/166 (77.11%), Query Frame = 0
BLAST of Carg23696 vs. ExPASy Swiss-Prot
Match: Q6FJD1 (Mitochondrial inner membrane magnesium transporter LPE10 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=LPE10 PE=3 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 6.5e-07 Identity = 33/98 (33.67%), Postives = 54/98 (55.10%), Query Frame = 0
BLAST of Carg23696 vs. ExPASy Swiss-Prot
Match: Q02783 (Mitochondrial inner membrane magnesium transporter MFM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MFM1 PE=1 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 8.5e-07 Identity = 34/102 (33.33%), Postives = 57/102 (55.88%), Query Frame = 0
BLAST of Carg23696 vs. ExPASy TrEMBL
Match: A0A6J1HIJ3 (magnesium transporter MRS2-11, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111464721 PE=3 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 3.5e-120 Identity = 232/235 (98.72%), Postives = 233/235 (99.15%), Query Frame = 0
BLAST of Carg23696 vs. ExPASy TrEMBL
Match: A0A6J1HK11 (Magnesium transporter OS=Cucurbita moschata OX=3662 GN=LOC111464814 PE=3 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 3.5e-120 Identity = 232/235 (98.72%), Postives = 233/235 (99.15%), Query Frame = 0
BLAST of Carg23696 vs. ExPASy TrEMBL
Match: A0A6J1I3J1 (magnesium transporter MRS2-11, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469313 PE=3 SV=1) HSP 1 Score: 433.0 bits (1112), Expect = 9.5e-118 Identity = 228/235 (97.02%), Postives = 230/235 (97.87%), Query Frame = 0
BLAST of Carg23696 vs. ExPASy TrEMBL
Match: A0A6J1I090 (Magnesium transporter OS=Cucurbita maxima OX=3661 GN=LOC111469313 PE=3 SV=1) HSP 1 Score: 433.0 bits (1112), Expect = 9.5e-118 Identity = 228/235 (97.02%), Postives = 230/235 (97.87%), Query Frame = 0
BLAST of Carg23696 vs. ExPASy TrEMBL
Match: A0A5A7U838 (Magnesium transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1371G00610 PE=3 SV=1) HSP 1 Score: 377.5 bits (968), Expect = 4.7e-101 Identity = 206/240 (85.83%), Postives = 218/240 (90.83%), Query Frame = 0
BLAST of Carg23696 vs. TAIR 10
Match: AT5G22830.1 (magnesium (Mg) transporter 10 ) HSP 1 Score: 210.3 bits (534), Expect = 1.9e-54 Identity = 132/227 (58.15%), Postives = 163/227 (71.81%), Query Frame = 0
BLAST of Carg23696 vs. TAIR 10
Match: AT3G19640.1 (magnesium transporter 4 ) HSP 1 Score: 44.7 bits (104), Expect = 1.4e-04 Identity = 27/90 (30.00%), Postives = 49/90 (54.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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