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Carg23686 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGCGTAGAGAAAATAACACCAGAGAAGCAGGATAACTCGATGGGATCGAGGCGGCGGTTGTCGTGCACCACCTGCTTTGATGCTCTGTGGTTCTGCTATTGTATGCATCCTTATAATCAACTCAATTATGTTATTTTCTTAGTTTTCTTTTCCCTAATCACTAGTATATTTGTGTTGTTTCCCATTAATTGGACTGAGGTTTTTAAAGTTCCATATCAATTGGGGAAGAGGATTTAAAGAAGTTTAATGTCTTTATAATATTTTACCCGAATCGTTTTTACGTTCTTATTTCTTCCAAAAACTATTTTGCTCAGGATTAGGTTTAAATTTGCTCATCATTGTTGTAACTGTCTAATACTCATCTTTGCACCTAATTTTTGCTAATTGTTGACCTCTTTTTTTTCATATCGATGAGCTCATCATTGAACCAAATTGTTAACTTGTTAATCTACTGGTTATATTTACTGGCAGCTCCAGTTCATCAGATGCAGCAATACTACAGGCTTGGGTTTTTTGATAACTGTTCTGACAAATGGACATCTCTTATTGACTGTTTAAATCTCAAGACAAAACGAGCTTCCGAGGTTCAGGTACGTATCGGATACAAAAATACGCTCTGGTTTTATAATGTATATATTTCAAGAATGCTGAAATCTTGCTGTGGATCTTTATTTGGTTTTTTTTTTTTCCATTAGCCCTGATATGTAAATATTAGGGGAGATTTCAATTGGACCAAAAGCTGTAAGACACAAATACCACTTCTAGCTTTTAGCTGTGTCTCCTCAAGTCCTTTTGGCTAGTCTACTAGAATTTTGTAGATAAGAAACTAACTTCCCATTAATGGAATGGATAGAACACAGAAAGGAGGAAGGATTCCAACTAGTAGAATACTCAAGTAATTTCCAAAAAACATTATCACACTTGTTTCTAGAAAAAAAAGTATGATGAAAAGGGATGCAACAAGAGGAGCTAAACTCTACAATACACACTCAAATTTCTGCCCGTCTCTAGCCTTTTCTCTAAAGCTTGTGGTTAACGGCATGCAGATCTTTTTTATTAGGGCATGAAACTGTTAGAATGCCTGTGACTTAAATGAACAAAGCCCAAACCAATCGATGAAGTTCTCGGTATTAGAATTTAGTTAAGTTACTAATTTAGGCCCTACAATTGGGTTTCTATTCGATCAATAAACTTTAAAAAGTGTTGAATAAGTCCTTGAACTTTCAGTTTTATGTTTATTTGGTCCATAAACTTTAAAAAGGGTTGAATAAGTTCTTGAACTTTCAATTTTACGTTTATTTGCTCCATAAACTTTAAAACGTGTTTAAACCTTTTATTTTGTGCCTCGTAAGTCCAAAAACTTTCAATTTTATGTCTAATAAGCCTTGATGTATTCGATGTTTTTTAAAATTCACGAAATTATTGGATATAAAGTTGAAAGTTTATGGTTCTATTAGACTTAAACTTTAATCTTATATCTATTAGGTCAATAATTTTTAAAAACTTTGAACTTATCTTCAAAGATCACACAAACTTAATAGTTTATGGACTTATTAACACTTTTTCAAATCGGCAATCTTTAAGACACAAGCTTGAAAGCTCAAGAACTATACTTGTCATTTAACCTAGAATTTTTTTTTTATCTCATGCTTCATAGTATTAATATTTTTGTACATTATGCACTTCATTTATTTGAAGCCTACAACTTTTTGTAACTGATGCTTAGGCTTTAGAAGAGGGCAATTGCAGCCCAACATGGCTCATATTTGGAAAATTTCCAAGCCTCTTACCTCATCTCAACTCTATGGAATTTAAACATGCCAAATAACAGTGAATTTTATTTTTCTTTGGTCCTGATCGTAAAATAAGTGATTTTTACAATATTGAGAGTAATCCTAAGTTTCATCGTTTATTCTACTTCTTAGGAAACATTCTGGAATTTTTCACATGTTTTATTTCCAACATCAGTTCTCCTATGAATTCTTTTGCAGCCCTTGTTTTGGCCTTCTAATATACTCCCAGTTTCTTATAATAATAAGAAGAATAATAAAGATGTTGAGGCGGCTGTTTCTTAGTTTCTGAAGATGGACTCTTGATGAGGAATTGGTAACTATTCATCTTTTATTCAAACTAATATGAGCTTTTTTAGTGTACTTCTGTAATAGCCTAAACCCACCGCTAGCAGATATGGTCTGCTTTGACTGGTTACGTATTGCCATCAGTTTCACGATTTTAAAACGCGTCTACTAGGGGAGAGGTTTTCCACACCCTATAAGGAATGCTTCGTTCCACCCTCTAATCGATATGGGATCTCACAACATCAGACATTAAAGAAAAAGAAGAAATAATTATTTTTCTCGTTTTTTTTTTCTTTTTTGGTAATCTCGTCCGATGACTGCAGGTTTGAATACCTTGTTTTTTCTCTATCTGTTTTTACTTTTTGGTTATTCAAATGTCATCTCAAAGAAAAACAAAAACCCTGTTGCTAAATACTTGTTTTGAGTAAGATCAATGCACAATTTGGTAGCTTGTTACCTTGAACCGAGTCTTGTTTTTTAGGGTCTCTCCACAATCAGATATTACTTTTATGGTTACTTAAGAAGTAACAAGATTAAGTTAAATGCAGGAAATCCTCGAAAGCCGAGAGAAAGCCAAATCTCACATCTGGACGTTTCGAACCCCAGCAGAAGCATCGTCGCATTGGAAAGAACTGTTCGGAGATTTAGATGAAATGGAATGAACAATGATTTCTATTTCCCCCCTTGAATTTCCTAGGACTAATACCCTTCTCTTGCACGGTTGGCCTTCCTCATCCGACTAGTTTGGCTAGAAAAATTGTTATTACTAAGAGAAATTATTCGATGCAGCTATCACGACAATGAAGACGTAGCTATTACACTCGAGAATAAGATATGTCTATTCATAAATTTAGGACAGTTTTGGTCTTTTTATAATCCTTGATCTTAAAGTGATTGTATTTGACTCATTTTAGTTGATTGAGAATGTTCCTATCTTTGTATTTGCCACTATTTTCATTTATACTGTTTGCACTTTGACCTTTGATTTTCAATCATTGTTTGAAATTTCTCTCACTTAAAACCGGGCTATTATCTTTGAATATAGGAGAGCTTCCATGCCCATCTTAT ATGGAAGGCGTAGAGAAAATAACACCAGAGAAGCAGGATAACTCGATGGGATCGAGGCGGCGGTTGTCGTGCACCACCTGCTTTGATGCTCTGTGGTTCTGCTATTCTCCAGTTCATCAGATGCAGCAATACTACAGGCTTGGGTTTTTTGATAACTGTTCTGACAAATGGACATCTCTTATTGACTGTTTAAATCTCAAGACAAAACGAGCTTCCGAGGTTCAGGAAATCCTCGAAAGCCGAGAGAAAGCCAAATCTCACATCTGGACGTTTCGAACCCCAGCAGAAGCATCGTCGCATTGGAAAGAACTGTTCGGAGATTTAGATGAAATGGAATGAACAATGATTTCTATTTCCCCCCTTGAATTTCCTAGGACTAATACCCTTCTCTTGCACGGTTGGCCTTCCTCATCCGACTAGTTTGGCTAGAAAAATTGTTATTACTAAGAGAAATTATTCGATGCAGCTATCACGACAATGAAGACGTAGCTATTACACTCGAGAATAAGATATGTCTATTCATAAATTTAGGACAGTTTTGGTCTTTTTATAATCCTTGATCTTAAAGTGATTGTATTTGACTCATTTTAGTTGATTGAGAATGTTCCTATCTTTGTATTTGCCACTATTTTCATTTATACTGTTTGCACTTTGACCTTTGATTTTCAATCATTGTTTGAAATTTCTCTCACTTAAAACCGGGCTATTATCTTTGAATATAGGAGAGCTTCCATGCCCATCTTAT ATGGAAGGCGTAGAGAAAATAACACCAGAGAAGCAGGATAACTCGATGGGATCGAGGCGGCGGTTGTCGTGCACCACCTGCTTTGATGCTCTGTGGTTCTGCTATTCTCCAGTTCATCAGATGCAGCAATACTACAGGCTTGGGTTTTTTGATAACTGTTCTGACAAATGGACATCTCTTATTGACTGTTTAAATCTCAAGACAAAACGAGCTTCCGAGGTTCAGGAAATCCTCGAAAGCCGAGAGAAAGCCAAATCTCACATCTGGACGTTTCGAACCCCAGCAGAAGCATCGTCGCATTGGAAAGAACTGTTCGGAGATTTAGATGAAATGGAATGA MEGVEKITPEKQDNSMGSRRRLSCTTCFDALWFCYSPVHQMQQYYRLGFFDNCSDKWTSLIDCLNLKTKRASEVQEILESREKAKSHIWTFRTPAEASSHWKELFGDLDEME Homology
BLAST of Carg23686 vs. NCBI nr
Match: XP_022964668.1 (uncharacterized protein LOC111464679 [Cucurbita moschata] >XP_022964669.1 uncharacterized protein LOC111464679 [Cucurbita moschata] >XP_022964670.1 uncharacterized protein LOC111464679 [Cucurbita moschata] >XP_022964671.1 uncharacterized protein LOC111464679 [Cucurbita moschata] >KAG7019308.1 hypothetical protein SDJN02_18268, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 241.1 bits (614), Expect = 4.5e-60 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of Carg23686 vs. NCBI nr
Match: XP_022970353.1 (uncharacterized protein LOC111469344 [Cucurbita maxima] >XP_022970354.1 uncharacterized protein LOC111469344 [Cucurbita maxima] >XP_022970355.1 uncharacterized protein LOC111469344 [Cucurbita maxima] >XP_022970356.1 uncharacterized protein LOC111469344 [Cucurbita maxima]) HSP 1 Score: 240.4 bits (612), Expect = 7.7e-60 Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of Carg23686 vs. NCBI nr
Match: XP_023519221.1 (uncharacterized protein LOC111782657 [Cucurbita pepo subsp. pepo] >XP_023519222.1 uncharacterized protein LOC111782657 [Cucurbita pepo subsp. pepo] >XP_023519223.1 uncharacterized protein LOC111782657 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 237.7 bits (605), Expect = 5.0e-59 Identity = 109/112 (97.32%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of Carg23686 vs. NCBI nr
Match: XP_038875103.1 (uncharacterized protein LOC120067633, partial [Benincasa hispida]) HSP 1 Score: 225.3 bits (573), Expect = 2.6e-55 Identity = 103/112 (91.96%), Postives = 107/112 (95.54%), Query Frame = 0
BLAST of Carg23686 vs. NCBI nr
Match: XP_004139465.1 (uncharacterized protein C227.17c [Cucumis sativus]) HSP 1 Score: 216.5 bits (550), Expect = 1.2e-52 Identity = 97/112 (86.61%), Postives = 107/112 (95.54%), Query Frame = 0
BLAST of Carg23686 vs. ExPASy TrEMBL
Match: A0A6J1HJL4 (uncharacterized protein LOC111464679 OS=Cucurbita moschata OX=3662 GN=LOC111464679 PE=4 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 2.2e-60 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of Carg23686 vs. ExPASy TrEMBL
Match: A0A6J1I2M7 (uncharacterized protein LOC111469344 OS=Cucurbita maxima OX=3661 GN=LOC111469344 PE=4 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 3.7e-60 Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of Carg23686 vs. ExPASy TrEMBL
Match: A0A0A0LSX6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G145950 PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 5.8e-53 Identity = 97/112 (86.61%), Postives = 107/112 (95.54%), Query Frame = 0
BLAST of Carg23686 vs. ExPASy TrEMBL
Match: A0A1S3CG12 (uncharacterized protein LOC103500495 OS=Cucumis melo OX=3656 GN=LOC103500495 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 1.3e-52 Identity = 98/112 (87.50%), Postives = 105/112 (93.75%), Query Frame = 0
BLAST of Carg23686 vs. ExPASy TrEMBL
Match: A0A6J1DHI6 (uncharacterized protein C227.17c OS=Momordica charantia OX=3673 GN=LOC111020523 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 1.4e-51 Identity = 96/112 (85.71%), Postives = 103/112 (91.96%), Query Frame = 0
BLAST of Carg23686 vs. TAIR 10
Match: AT4G25315.2 (Expressed protein ) HSP 1 Score: 136.0 bits (341), Expect = 1.9e-32 Identity = 61/102 (59.80%), Postives = 77/102 (75.49%), Query Frame = 0
BLAST of Carg23686 vs. TAIR 10
Match: AT4G25315.1 (Expressed protein ) HSP 1 Score: 123.2 bits (308), Expect = 1.3e-28 Identity = 60/121 (49.59%), Postives = 77/121 (63.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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