Carg23674 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23674
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DnaJ/Hsp40 cysteine-rich domain superfamily protein
Location	Carg_Chr03: 3071094 .. 3074521 (-)
RNA-Seq Expression	Carg23674
Synteny	Carg23674

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCATCTTCTTTAACCATCTCATCATCTTTCATTTTCCGTAATTCATCGCAGAAATTACTTGCCATTAGAAAGATTCAAGATGGTTTGTGTTTCCAAAGGAACAAGTTCTCCAAGATCTTCGCGGTCTATCCTAATGGCTCTGCTTCTGGGGTTCGTACTTTCCAAATTGGTTATGTGATTCTATTTGCTGTTTTATATTCAATGAACGAATATGGTCCTGCGTTCATTTAGGTTGAATCTATTGTACAGTCGTTTTTGTGCATTTGAAGGTATTTGGTTGTTTGGTGCATAAGCGACTTTTTTGAGCTATGCTTTTCTGCTAGAAGCTGAACATTTTGGTTTAAAGTTAGTGCTATGTTGTGTTGTTTTTTTTTTTTTCCTTCTTATGTTTGCATTCAGTTTAAACTTGACAAGGTTTAATGAGAAATGGTAAAGCATAGAACTCCCACATGTGATAATGGCGGTCTCTTTATATAACTATTGTTTGTCTGATGATCAAATCGCAGGCTCGGTCTCATATCTGTAAAAAGAACCATTTTATACCTTGGTATAATTCCTTAGTGCGAGATCCCACGTTGGTTGGGTTGGAGAACGAAGCATTCTTTATAAGGATGTGAAAACCTCTCCCTAGTGGACACATTTTAAAAACCTTGAGGGGAAAGTCCAAAGAGGACAATATCTGCTAGTGCTAGGTTTGGGTCGTTACAAATGGTATTAGAGCCAGACACTGGAGGATGTGCTAGTGAGGAGAGGTTGAGCCCCGATGGGGGTGGACACGAGGTGGTGTGCCAGCAAGGGCCCTGGGTCCCGAAGGGGGTAGATTGGGAGGGGGGGGGGGATCCCACATCGATTGGAGAAGGGAACAAGTGCCAGCGAGGATGCGAGACCCCTAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGAGAACCAAACATTCTTTATAAGGGTGTGAAAACCTCTCCCTAGCATACATGTTGGAAGGGAACAAGTGCCAGCGAGGATGCAGGACCCCCAAGGAGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGAAAACCAAGCATTCTTTATAAGGGTGTGAAAACCTCTCCTTAGCATACACGTTTTAAAATCCTTGAATGAAAGCCCGAAAGGGAAGCCCAAGGAGGACAAAATCTCCTAGCGGTGGGCTTGAGCCATGTAACACACCTTTTGCCTGCTGAGTTGACATAATTGATTGAAACTGGCAAGAGCATTTGTAATAAGTAAACAAGCATTTGTGATAAACCTCAGCAATCAATATTTAATGTCATTAGCTGTTGGCAATAGTAGCTAGACATCAAACATAACCTCTGCTTTTCGCCTTTTCTGTCATATTCCGATCTACGTGTTCGTGATTATGTATTCAATCATATGCTTCTAAGTATATGATCTGCATTCATAGTTTGTGATTGCTATATAATTTTGGTTTTGAGAATCTTGTCAAATTTTCTGGATGTAGCCGAGGGATTTTTCAGCTGCAGATGTTCACAGACAACGAAGTGCTTTTGAATCTTTATTTTGCTATGATAAGGCTATTCCGGAAGAAATAATTGAGATGCCTGTTGGAATATCTCTGGCAGAGAAAATGATTGGAGATAATCCCCGTTGCACTGATTGTCATGCTAAAGGTGCTGTTCTTTGCACAACTTGCTCCGGTTCGGGCTTGTATGTTGACTCGATATTGGAGAGCCAGGGAATCATTGTGAAAGTTCGTTGCCTCGGTAAAATCTGTATGTTTAGTTCTCAGGTTACTTCTTGAAAAGTTTCTGTCCTAACTCTAATCATCTTCTTGTAGGTTGTGGTGGAACTGGTAATACCATGTGTTCAGAATGCGGCGGTCGTGGTCACCTGGGATCTAAATGAGTTCCAAAGACTCGTTTTGAACGTTTTGTCTTGAACCGCCCCCAGCTGTTGTAATATTGGGCATGGATTATGCAATGATGATGAGATATATTAATCTTGAAATTTAGTGAAGATTGATAGAGTTCATCTTTCATTTAAGCAGCTTGTCTTGCCATAGTTTGGAGCAATTATATCTGATTCAGTTCAACTTACTTCATAGTGTTCCTTTCCCTCAAGATTTGTACTTGTTAGTCAAACCGACACGAATTCTTTCTGAGCTGCCTACAAAATCAGAAATATATGAACTTCAAGGAAAGTTTTCACAAAGTACTGCATGAATCTCTTTGTTTTTGTTCTTGTTAGTAGTTATGAAGCTTTATTATGTGTTTGAATAAAGAATCTACCATGAATTTCTCTCTAAGAACAAGATTTGCAGGGAAAAAGGAAGAAGCTTAAAGCTGGCATTGCTGTTTCAGTGGGGGAAGGCATTTTTTTCTTAGGCCAGTCTCTTACTGGAGCTTCAGGAATGGTCTAAATCTGCTTCTTCACTTGTTTTCATGTTTCAGGGTTGATTAAACTTGCAACCTCCGCCGAAGTTCTCGAATCCGGTCTGGCACAGTGGAGTCGAACCGAGGATGCAGGGGATTGTCTGCATAAGCTACGTAGTAGGCAGACACACATGCTTGTGGCCATGCCATTCCGATTCGACACTGCAACAACAACAACAACAACAACCATGAACATTGTTATCCAGAAGTTAAATTCCTCTCAGGTATTACCATTAAATTCAGTTACAGTTTAGAACAGTTCCCTCTAAAATATTTCAGCTCATTACCACAAAATAGCCAATCAGGAAGGCGTAGATTGCTAATTCTGTTGCGTAGCTCTTATGTATTACAAGTGCCCAGATCCCACTTATAATGCTACAGATTGCACCACCCGAAACCCCGCAAAGAACGCAGAACGACACGGTGAGATCGGAGTCTATAACGATTTCCAAATCCACCTTCTCGAATGCCTCCCAGGTATCATATGAAGCTTGCACAATCCCTTTATTGTAAACTCCAACATGGACAAAACCCCACCTGTTTCCATGGTTTCTCAGCATTGAAGCTAATTCTGAGTAGCAGGGTGCACAAGAGAAAAGGAACTCATCCGAGTCTCCTGCCACCAACCTCATGGCACGGGCCGATCCGTGAATGAAGCTGATAAAAGGGATGATGGCTGAGCCAAGAGAAATAGTTCCAGCTGAATGCTTTATTATGTCGTAGAAAGCTGCTCGTATGTCCTTTTCCCGACCCCAAGCTAAATTAAAGTACTTTATGCGCGAGATTGTAACGTGCACTACGTTCTTGATAACCTGCAGAGTCCATGTTAGGCTCAACAGTATTGCTGCTATGAACAACGCCTTAAAACTCGACGTAATAGAAGTTGCTCCACCGATGCCGATGACCACGAAAGCTGCGTATAGAACGCCAATGAGGATTGATCCAAAGACAAAGATTGGAGTGTTCGTAGGAGGGTACTTAGTAGAAAGTGATAGAAGTTGA

mRNA sequence

ATGGATTCATCTTCTTTAACCATCTCATCATCTTTCATTTTCCGTAATTCATCGCAGAAATTACTTGCCATTAGAAAGATTCAAGATGGTTTGTGTTTCCAAAGGAACAAGTTCTCCAAGATCTTCGCGGTCTATCCTAATGGCTCTGCTTCTGGGCCGAGGGATTTTTCAGCTGCAGATGTTCACAGACAACGAAGTGCTTTTGAATCTTTATTTTGCTATGATAAGGCTATTCCGGAAGAAATAATTGAGATGCCTGTTGGAATATCTCTGGCAGAGAAAATGATTGGAGATAATCCCCGTTGCACTGATTGTCATGCTAAAGGTGCTGTTCTTTGCACAACTTGCTCCGGTTCGGGCTTGTATGTTGACTCGATATTGGAGAGCCAGGGAATCATTGTGAAAGTTCGTTGCCTCGGTTGTGGTGGAACTGGTAATACCATGTGTTCAGAATGCGGCGGTCGTGGGTTGATTAAACTTGCAACCTCCGCCGAAGTTCTCGAATCCGGTCTGGCACAGTGGAGTCGAACCGAGGATGCAGGGGATTGTCTGCATAAGCTACGTAGTAGGCAGACACACATGCTTGTGGCCATGCCATTCCGATTCGACACTGCAACAACAACAACAACAACAACCATGAACATTGTTATCCAGAAGTTAAATTCCTCTCAGATCCCACTTATAATGCTACAGATTGCACCACCCGAAACCCCGCAAAGAACGCAGAACGACACGGTGAGATCGGAGTCTATAACGATTTCCAAATCCACCTTCTCGAATGCCTCCCAGGGTGCACAAGAGAAAAGGAACTCATCCGAGTCTCCTGCCACCAACCTCATGGCACGGGCCGATCCAGTCCATGTTAGGCTCAACAGTATTGCTGCTATGAACAACGCCTTAAAACTCGACGTAATAGAAGTTGCTCCACCGATGCCGATGACCACGAAAGCTGCGTATAGAACGCCAATGAGGATTGATCCAAAGACAAAGATTGGAGTGTTCGTAGGAGGGTACTTAGTAGAAAGTGATAGAAGTTGA

Coding sequence (CDS)

ATGGATTCATCTTCTTTAACCATCTCATCATCTTTCATTTTCCGTAATTCATCGCAGAAATTACTTGCCATTAGAAAGATTCAAGATGGTTTGTGTTTCCAAAGGAACAAGTTCTCCAAGATCTTCGCGGTCTATCCTAATGGCTCTGCTTCTGGGCCGAGGGATTTTTCAGCTGCAGATGTTCACAGACAACGAAGTGCTTTTGAATCTTTATTTTGCTATGATAAGGCTATTCCGGAAGAAATAATTGAGATGCCTGTTGGAATATCTCTGGCAGAGAAAATGATTGGAGATAATCCCCGTTGCACTGATTGTCATGCTAAAGGTGCTGTTCTTTGCACAACTTGCTCCGGTTCGGGCTTGTATGTTGACTCGATATTGGAGAGCCAGGGAATCATTGTGAAAGTTCGTTGCCTCGGTTGTGGTGGAACTGGTAATACCATGTGTTCAGAATGCGGCGGTCGTGGGTTGATTAAACTTGCAACCTCCGCCGAAGTTCTCGAATCCGGTCTGGCACAGTGGAGTCGAACCGAGGATGCAGGGGATTGTCTGCATAAGCTACGTAGTAGGCAGACACACATGCTTGTGGCCATGCCATTCCGATTCGACACTGCAACAACAACAACAACAACAACCATGAACATTGTTATCCAGAAGTTAAATTCCTCTCAGATCCCACTTATAATGCTACAGATTGCACCACCCGAAACCCCGCAAAGAACGCAGAACGACACGGTGAGATCGGAGTCTATAACGATTTCCAAATCCACCTTCTCGAATGCCTCCCAGGGTGCACAAGAGAAAAGGAACTCATCCGAGTCTCCTGCCACCAACCTCATGGCACGGGCCGATCCAGTCCATGTTAGGCTCAACAGTATTGCTGCTATGAACAACGCCTTAAAACTCGACGTAATAGAAGTTGCTCCACCGATGCCGATGACCACGAAAGCTGCGTATAGAACGCCAATGAGGATTGATCCAAAGACAAAGATTGGAGTGTTCGTAGGAGGGTACTTAGTAGAAAGTGATAGAAGTTGA

Protein sequence

MDSSSLTISSSFIFRNSSQKLLAIRKIQDGLCFQRNKFSKIFAVYPNGSASGPRDFSAADVHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGSGLYVDSILESQGIIVKVRCLGCGGTGNTMCSECGGRGLIKLATSAEVLESGLAQWSRTEDAGDCLHKLRSRQTHMLVAMPFRFDTATTTTTTTMNIVIQKLNSSQIPLIMLQIAPPETPQRTQNDTVRSESITISKSTFSNASQGAQEKRNSSESPATNLMARADPVHVRLNSIAAMNNALKLDVIEVAPPMPMTTKAAYRTPMRIDPKTKIGVFVGGYLVESDRS

Homology

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BLAST of Carg23674 vs. NCBI nr
Match: KAG7033643.1 (hypothetical protein SDJN02_03367, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 671.8 bits (1732), Expect = 3.2e-189
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0


Query: 1   MDSSSLTISSSFIFRNSSQKLLAIRKIQDGLCFQRNKFSKIFAVYPNGSASGPRDFSAAD 60
           MDSSSLTISSSFIFRNSSQKLLAIRKIQDGLCFQRNKFSKIFAVYPNGSASGPRDFSAAD
Sbjct: 1   MDSSSLTISSSFIFRNSSQKLLAIRKIQDGLCFQRNKFSKIFAVYPNGSASGPRDFSAAD 60

Query: 61  VHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGSG 120
           VHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGSG
Sbjct: 61  VHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGSG 120

Query: 121 LYVDSILESQGIIVKVRCLGCGGTGNTMCSECGGRGLIKLATSAEVLESGLAQWSRTEDA 180
           LYVDSILESQGIIVKVRCLGCGGTGNTMCSECGGRGLIKLATSAEVLESGLAQWSRTEDA
Sbjct: 121 LYVDSILESQGIIVKVRCLGCGGTGNTMCSECGGRGLIKLATSAEVLESGLAQWSRTEDA 180

Query: 181 GDCLHKLRSRQTHMLVAMPFRFDTATTTTTTTMNIVIQKLNSSQIPLIMLQIAPPETPQR 240
           GDCLHKLRSRQTHMLVAMPFRFDTATTTTTTTMNIVIQKLNSSQIPLIMLQIAPPETPQR
Sbjct: 181 GDCLHKLRSRQTHMLVAMPFRFDTATTTTTTTMNIVIQKLNSSQIPLIMLQIAPPETPQR 240

Query: 241 TQNDTVRSESITISKSTFSNASQGAQEKRNSSESPATNLMARADPVHVRLNSIAAMNNAL 300
           TQNDTVRSESITISKSTFSNASQGAQEKRNSSESPATNLMARADPVHVRLNSIAAMNNAL
Sbjct: 241 TQNDTVRSESITISKSTFSNASQGAQEKRNSSESPATNLMARADPVHVRLNSIAAMNNAL 300

Query: 301 KLDVIEVAPPMPMTTKAAYRTPMRIDPKTKIGVFVGGYLVESDRS 346
           KLDVIEVAPPMPMTTKAAYRTPMRIDPKTKIGVFVGGYLVESDRS
Sbjct: 301 KLDVIEVAPPMPMTTKAAYRTPMRIDPKTKIGVFVGGYLVESDRS 345

[Close]

BLAST of Carg23674 vs. NCBI nr
Match: KAG7027468.1 (hypothetical protein SDJN02_11481 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 365.2 bits (936), Expect = 6.4e-97
Identity = 217/326 (66.56%), Postives = 237/326 (72.70%), Query Frame = 0


Query: 1   MDSSSLTISSSFIFRNSSQKLLAIRKIQDGLCFQRNKFSKIFAVYPNGSASGPRDFSAAD 60
           MDS++L +SSS I R+SS KL + R+IQ  LCF+R KFSKIFAVYPNGSAS   D S AD
Sbjct: 1   MDSATLAVSSSVIVRSSSLKLFSSRRIQAELCFERRKFSKIFAVYPNGSAS-KGDSSGAD 60

Query: 61  VHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGSG 120
           VHR+RS  E+LFCYDKAIPEE IE PVGISLAEKMIGDNPRC++CHAKGAVLCTTCSGSG
Sbjct: 61  VHRRRSTSETLFCYDKAIPEERIETPVGISLAEKMIGDNPRCSECHAKGAVLCTTCSGSG 120

Query: 121 LYVDSILESQGIIVKVRCLGCGGTGNTMCSECGGRGLIKLATSAEVLESGLAQWSRTEDA 180
           LYVDSILESQGIIVKVRCL                 LI LA SAE LES LA+WSRTEDA
Sbjct: 121 LYVDSILESQGIIVKVRCL--------------VYDLINLAISAEGLESALARWSRTEDA 180

Query: 181 GDCLHKLRSRQTHMLVAMPFRFDTATTTTTTTMNIVIQKLN--------SSQIPLIMLQI 240
           GDCLHK  SRQ HMLVA PF   TA    T  MNIVIQKLN        S+QIPLIMLQI
Sbjct: 181 GDCLHKPHSRQKHMLVATPFLSGTA---ITEAMNIVIQKLNCSQLLCITSAQIPLIMLQI 240

Query: 241 APPETPQRTQNDTVRSESITISKSTFSNASQGAQEKRNSSESPATNLMARADPVHVRLNS 300
           APPE+PQR Q DTVRSE ITISKS   NASQ     +        ++ A A+ V VRLNS
Sbjct: 241 APPESPQRKQKDTVRSEFITISKSALLNASQTPTWTKPHRFPRLLSIEAIAE-VQVRLNS 300

Query: 301 IAAMNNALKLDVIEVAPPMPMTTKAA 319
           IAAMNNAL  D+  +APPMPMT K A
Sbjct: 301 IAAMNNALNPDLTAIAPPMPMTKKEA 307

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BLAST of Carg23674 vs. NCBI nr
Match: XP_022950676.1 (uncharacterized protein LOC111453701 [Cucurbita moschata])

HSP 1 Score: 318.2 bits (814), Expect = 9.0e-83
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MDSSSLTISSSFIFRNSSQKLLAIRKIQDGLCFQRNKFSKIFAVYPNGSASGPRDFSAAD 60
           MDSSSLTISSSFIFRNSSQKLLAIRKIQDGLCFQRNKFSKIFAVYPNGSASGPRDFSAAD
Sbjct: 1   MDSSSLTISSSFIFRNSSQKLLAIRKIQDGLCFQRNKFSKIFAVYPNGSASGPRDFSAAD 60

Query: 61  VHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGSG 120
           VHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGSG
Sbjct: 61  VHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGSG 120

Query: 121 LYVDSILESQGIIVKVRCLGCGGTGNTMCSECGGRG 157
           LYVDSILESQGIIVKVRCLGCGGTGNTMCSECGGRG
Sbjct: 121 LYVDSILESQGIIVKVRCLGCGGTGNTMCSECGGRG 156

[Close]

BLAST of Carg23674 vs. NCBI nr
Match: KAG6603460.1 (hypothetical protein SDJN03_04069, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 315.8 bits (808), Expect = 4.5e-82
Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0


Query: 1   MDSSSLTISSSFIFRNSSQKLLAIRKIQDGLCFQRNKFSKIFAVYPNGSASGPRDFSAAD 60
           MDSSSLTISSSFIFRNSSQKLLAIRKIQDGLCFQRNKFSKIFAVYPNGSASGPRDFSAAD
Sbjct: 1   MDSSSLTISSSFIFRNSSQKLLAIRKIQDGLCFQRNKFSKIFAVYPNGSASGPRDFSAAD 60

Query: 61  VHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGSG 120
           VHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTC GSG
Sbjct: 61  VHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCFGSG 120

Query: 121 LYVDSILESQGIIVKVRCLGCGGTGNTMCSECGGRG 157
           LYVDSILESQGIIVKVRCLGCGGTGNTMCSECGGRG
Sbjct: 121 LYVDSILESQGIIVKVRCLGCGGTGNTMCSECGGRG 156

[Close]

BLAST of Carg23674 vs. NCBI nr
Match: XP_038881865.1 (uncharacterized protein LOC120073222 isoform X1 [Benincasa hispida])

HSP 1 Score: 273.5 bits (698), Expect = 2.5e-69
Identity = 135/156 (86.54%), Postives = 141/156 (90.38%), Query Frame = 0


Query: 1   MDSSSLTISSSFIFRNSSQKLLAIRKIQDGLCFQRNKFSKIFAVYPNGSASGPRDFSAAD 60
           MDS++LT+SSS I RNSSQKLLA RKIQ GLCF RNKFSKI AVYPNGSASG  D S AD
Sbjct: 1   MDSATLTMSSSVILRNSSQKLLANRKIQPGLCFARNKFSKISAVYPNGSASGQGDSSPAD 60

Query: 61  VHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGSG 120
           VHR+RS+FESLFCYDKAIPEE IE PVGISLAE+MIGDNPRCTDCHAKG VLC TCSGSG
Sbjct: 61  VHRRRSSFESLFCYDKAIPEERIETPVGISLAERMIGDNPRCTDCHAKGVVLCATCSGSG 120

Query: 121 LYVDSILESQGIIVKVRCLGCGGTGNTMCSECGGRG 157
           LYVDSILESQGIIVKVRCLGCGGTGN MCSECGGRG
Sbjct: 121 LYVDSILESQGIIVKVRCLGCGGTGNIMCSECGGRG 156

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BLAST of Carg23674 vs. ExPASy Swiss-Prot
Match: Q3AF07 (Chaperone protein DnaJ OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) OX=246194 GN=dnaJ PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 3.0e-04
Identity = 36/123 (29.27%), Postives = 51/123 (41.46%), Query Frame = 0


Query: 78  IPEEIIEMPVGISLAEKMIGDNPR--------CTDCHAKGA------VLCTTCSGSGLYV 137
           +P + IE  + ++L E + G            C  CH  GA      + C TC G G   
Sbjct: 120 VPGDDIEAVLELTLEEAVFGGEKELRVTRTETCGHCHGNGAEPGTPIITCPTCQGRGQIH 179

Query: 138 DSILESQGIIVKVR-CLGCGGTG---NTMCSECGGRGLIKLATSAEV-LESGLAQWSRTE 182
             +    G +V+ + C  C G G    T C ECGG GL++   S  V +  G+    R  
Sbjct: 180 QEVKTLFGRMVRSQVCSTCRGEGKIPKTPCRECGGSGLVRKTRSITVKIPPGIDHGHRLR 239

[Close]

BLAST of Carg23674 vs. ExPASy TrEMBL
Match: A0A6J1GFH6 (uncharacterized protein LOC111453701 OS=Cucurbita moschata OX=3662 GN=LOC111453701 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 4.4e-83
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MDSSSLTISSSFIFRNSSQKLLAIRKIQDGLCFQRNKFSKIFAVYPNGSASGPRDFSAAD 60
           MDSSSLTISSSFIFRNSSQKLLAIRKIQDGLCFQRNKFSKIFAVYPNGSASGPRDFSAAD
Sbjct: 1   MDSSSLTISSSFIFRNSSQKLLAIRKIQDGLCFQRNKFSKIFAVYPNGSASGPRDFSAAD 60

Query: 61  VHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGSG 120
           VHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGSG
Sbjct: 61  VHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGSG 120

Query: 121 LYVDSILESQGIIVKVRCLGCGGTGNTMCSECGGRG 157
           LYVDSILESQGIIVKVRCLGCGGTGNTMCSECGGRG
Sbjct: 121 LYVDSILESQGIIVKVRCLGCGGTGNTMCSECGGRG 156

[Close]

BLAST of Carg23674 vs. ExPASy TrEMBL
Match: A0A6J1IPP7 (uncharacterized protein LOC111478329 OS=Cucurbita maxima OX=3661 GN=LOC111478329 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 5.2e-68
Identity = 133/136 (97.79%), Postives = 135/136 (99.26%), Query Frame = 0


Query: 1   MDSSSLTISSSFIFRNSSQKLLAIRKIQDGLCFQRNKFSKIFAVYPNGSASGPRDFSAAD 60
           MDSSSLTISSSFIFRNS+QKLLAIRKIQDGLCF+RNKFSKIFAVYPNGSASGP DFSAAD
Sbjct: 1   MDSSSLTISSSFIFRNSAQKLLAIRKIQDGLCFERNKFSKIFAVYPNGSASGPGDFSAAD 60

Query: 61  VHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGSG 120
           VHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGSG
Sbjct: 61  VHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGSG 120

Query: 121 LYVDSILESQGIIVKV 137
           LYVDSILESQGIIVKV
Sbjct: 121 LYVDSILESQGIIVKV 136

[Close]

BLAST of Carg23674 vs. ExPASy TrEMBL
Match: A0A6J1DJS1 (uncharacterized protein LOC111021761 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021761 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 5.2e-68
Identity = 134/160 (83.75%), Postives = 142/160 (88.75%), Query Frame = 0


Query: 1   MDSSSLTISSSFIFRNSSQKLLAIRKIQDGLCFQRNKFSKIFAVYPNG----SASGPRDF 60
           MDS++LT+SSS I RNSSQKLL  RKIQ GLCF+R +FSKIFAVYPNG    SA G  D 
Sbjct: 1   MDSATLTVSSSIILRNSSQKLLPGRKIQAGLCFRRRRFSKIFAVYPNGSARSSAPGQGDS 60

Query: 61  SAADVHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTC 120
           SAADVHR+RS FESLFCYDKAIPEE IE PVGISLAEK+IGDNPRCTDCHAKGAVLCTTC
Sbjct: 61  SAADVHRRRSTFESLFCYDKAIPEERIEKPVGISLAEKIIGDNPRCTDCHAKGAVLCTTC 120

Query: 121 SGSGLYVDSILESQGIIVKVRCLGCGGTGNTMCSECGGRG 157
           SGSGLYVD+ILESQGIIVKVRCLGCGGTGN MCSECGGRG
Sbjct: 121 SGSGLYVDAILESQGIIVKVRCLGCGGTGNIMCSECGGRG 160

[Close]

BLAST of Carg23674 vs. ExPASy TrEMBL
Match: A0A6J1DNW0 (uncharacterized protein LOC111021761 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021761 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.2e-67
Identity = 135/159 (84.91%), Postives = 143/159 (89.94%), Query Frame = 0


Query: 1   MDSSSLTISSSFIFRNSSQKLLAIRKIQDGLCFQRNKFSKIFAVYPNGSA--SGP-RDFS 60
           MDS++LT+SSS I RNSSQKLL  RKIQ GLCF+R +FSKIFAVYPNGSA  S P  D S
Sbjct: 1   MDSATLTVSSSIILRNSSQKLLPGRKIQAGLCFRRRRFSKIFAVYPNGSARSSAPGGDSS 60

Query: 61  AADVHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCS 120
           AADVHR+RS FESLFCYDKAIPEE IE PVGISLAEK+IGDNPRCTDCHAKGAVLCTTCS
Sbjct: 61  AADVHRRRSTFESLFCYDKAIPEERIEKPVGISLAEKIIGDNPRCTDCHAKGAVLCTTCS 120

Query: 121 GSGLYVDSILESQGIIVKVRCLGCGGTGNTMCSECGGRG 157
           GSGLYVD+ILESQGIIVKVRCLGCGGTGN MCSECGGRG
Sbjct: 121 GSGLYVDAILESQGIIVKVRCLGCGGTGNIMCSECGGRG 159

[Close]

BLAST of Carg23674 vs. ExPASy TrEMBL
Match: A0A0A0L441 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G580370 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.3e-66
Identity = 132/156 (84.62%), Postives = 141/156 (90.38%), Query Frame = 0


Query: 1   MDSSSLTISSSFIFRNSSQKLLAIRKIQDGLCFQRNKFSKIFAVYPNGSASGPRDFSAAD 60
           MDS++LT+SSS I RNSS KLL IRKIQ  LCF+RNKFSKI A+YPNGSASG  D SAAD
Sbjct: 1   MDSATLTMSSSVILRNSSLKLLVIRKIQPPLCFKRNKFSKISALYPNGSASG-GDSSAAD 60

Query: 61  VHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGSG 120
           VHR+RS+FESLFCYDKAIPEE IE P+GISLAEKMIG+NPRCTDC AKGAVLC TCSGSG
Sbjct: 61  VHRRRSSFESLFCYDKAIPEERIETPIGISLAEKMIGNNPRCTDCQAKGAVLCATCSGSG 120

Query: 121 LYVDSILESQGIIVKVRCLGCGGTGNTMCSECGGRG 157
           LYVDSILESQGIIVKVRCLGCGGTGN MCSECGGRG
Sbjct: 121 LYVDSILESQGIIVKVRCLGCGGTGNIMCSECGGRG 155

[Close]

BLAST of Carg23674 vs. TAIR 10
Match: AT5G17840.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 169.9 bits (429), Expect = 3.7e-42
Identity = 76/97 (78.35%), Postives = 87/97 (89.69%), Query Frame = 0


Query: 60  DVHRQRSAFESLFCYDKAIPEEIIEMPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGS 119
           DVHRQRS+ ES+FCYDK IPEEIIE PVG+S++E+ IGDN RCT C AKGA+LC+TCSG+
Sbjct: 54  DVHRQRSSLESMFCYDKPIPEEIIEEPVGLSMSEREIGDNQRCTCCEAKGALLCSTCSGT 113

Query: 120 GLYVDSILESQGIIVKVRCLGCGGTGNTMCSECGGRG 157
           GLYVDSI+ESQGIIVKVRCLGCGG+GN MC  CGGRG
Sbjct: 114 GLYVDSIMESQGIIVKVRCLGCGGSGNIMCKLCGGRG 150

The following BLAST results are available for this feature:

BLAST of Carg23674 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033643.1	3.2e-189	100.00	hypothetical protein SDJN02_03367, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG7027468.1	6.4e-97	66.56	hypothetical protein SDJN02_11481 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022950676.1	9.0e-83	100.00	uncharacterized protein LOC111453701 [Cucurbita moschata]	[more]
KAG6603460.1	4.5e-82	99.36	hypothetical protein SDJN03_04069, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038881865.1	2.5e-69	86.54	uncharacterized protein LOC120073222 isoform X1 [Benincasa hispida]	[more]

BLAST of Carg23674 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3AF07	3.0e-04	29.27	Chaperone protein DnaJ OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161...	[more]

BLAST of Carg23674 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GFH6	4.4e-83	100.00	uncharacterized protein LOC111453701 OS=Cucurbita moschata OX=3662 GN=LOC1114537...	[more]
A0A6J1IPP7	5.2e-68	97.79	uncharacterized protein LOC111478329 OS=Cucurbita maxima OX=3661 GN=LOC111478329...	[more]
A0A6J1DJS1	5.2e-68	83.75	uncharacterized protein LOC111021761 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DNW0	1.2e-67	84.91	uncharacterized protein LOC111021761 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A0A0L441	1.3e-66	84.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G580370 PE=4 SV=1	[more]

BLAST of Carg23674 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17840.1	3.7e-42	78.35	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..278
None	No IPR available	PANTHER	PTHR15852	PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN	coord: 42..156
None	No IPR available	PANTHER	PTHR15852:SF13	DNAJ/HSP40 CYSTEINE-RICH DOMAIN SUPERFAMILY PROTEIN	coord: 42..156
IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily	SUPERFAMILY	57938	DnaJ/Hsp40 cysteine-rich domain	coord: 99..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23674-RA	Carg23674-RA	mRNA