
Carg23643 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGCTTCATCACTCCACTTTTTCCCTTTATAAAACTCCGCAACTCATCGGCAATTCCAACTCTCCTCTTTTTCTTCTTCTTTTCTCTCTCTCTCTCTCTCTGAGATTTGAGAAAACTATGGATTCTTCTGTAGCTGCGAGAAGGCCGTATTTCATCGATGAGGACGACGGGTTGGTCTCCTTGGTGGATGTGGAAGCTGGAATTTCTGGAAACCAGAACAGCCACTATCCTCAGCCTTTCTTCCACCGCCCAAGGATTTGCCATGGTGGTACTCACCGGCGAGGCACGAGAAACCTCTCGGTTTCCTCCTCGAGAGTTTCAGCGAGGTTTTATGATGCCAGATTTGAACATCATCATCACCATTTCTTGGAAGCTTGTTTTCTCTGCAAGAAACCGCTCTCTGATAACAAAGACATTTTCATGTACAGGTTAGTTTTTCCTCCCTGTCTTTTCTTTTTTCAGTTTAAAAATAGTTGTATTTATTAGAGTTGTTTTTTAGATCTGAATTGTGGAATTTGCTTTTGATTTAAGTAAGCGTCTGGTAATTGGTTAAGATTTTTGGTTTATTCGACATTTTGTGTTGAAATTCTCGGTAGCGAGGAGGAATCCGTTTAAATCGCTGATAATCAACAGAGGAATTCGATTATTTGAGAGTAGTTCGACATTTTGTGTTGAAATTCTCGGCAGCGAGGATGAATTCGTTTAAATCTCTGATAATCAAGAGAGGAATTCGATTATTGGAGAGTAGTTCGACATTTTGTGTTGAAATTCTCGGTAGCGAGGAGGAATCCGTTTAAATTTCTGATAATCAAGAGAGGAATTCGATTATTCCTAGAGAGCAGTTTATTTAATAGAAATATAGGATCGAGCGGCTTCTTGACGAACATGAAATCTCAAGATCTGAAAACGCCTTTTTCCTTGAGATTTTGAGAATTAGATCTTTAACTATGAAGAACAAAAGAAGAGTTATAGATACCGGATCCATGGTTAATTCTATTTCTAACGAGATGATTACGATTATGTTCTGCAGAGGAGACACTCCATTTTGCAGCGAAGAGTGTAGAGAAAAGCAAATCGACATGGACGAAGCGAAAGAAAAGAAGTTGAATCTATCATCATCCATCAAAGCCATGAGAAAAAAAGATCAGAGAAAATCCACTTCTCCGGGAAAGTCCACCACCGGGCACGACTGCCGTTTCCGCGCCGGCACGGTGTTGGCGGCGTAGATGAAGGAATAATAATCACAACATATACATTATATGAACATTCCCGGAAAATAGGTGAAAATCTGAAGAACCGGGAAGATCTGAGAGTTGGTTTTTGTTATATTTTTTCTTTTTTGGTTTGGGGGGGAGAAAATTATGCAACTGTGAATGAAGTTGTGTTTATGGTGGTGAGGAAGTCTTCGTGTTCATTTTTTTTTCCTGGGATTTTCTCACCTTTTTTTGTTGTTGTTTTTTTTCT CAGCTTCATCACTCCACTTTTTCCCTTTATAAAACTCCGCAACTCATCGGCAATTCCAACTCTCCTCTTTTTCTTCTTCTTTTCTCTCTCTCTCTCTCTCTGAGATTTGAGAAAACTATGGATTCTTCTGTAGCTGCGAGAAGGCCGTATTTCATCGATGAGGACGACGGGTTGGTCTCCTTGGTGGATGTGGAAGCTGGAATTTCTGGAAACCAGAACAGCCACTATCCTCAGCCTTTCTTCCACCGCCCAAGGATTTGCCATGGTGGTACTCACCGGCGAGGCACGAGAAACCTCTCGGTTTCCTCCTCGAGAGTTTCAGCGAGGTTTTATGATGCCAGATTTGAACATCATCATCACCATTTCTTGGAAGCTTGTTTTCTCTGCAAGAAACCGCTCTCTGATAACAAAGACATTTTCATGTACAGAGGAGACACTCCATTTTGCAGCGAAGAGTGTAGAGAAAAGCAAATCGACATGGACGAAGCGAAAGAAAAGAAGTTGAATCTATCATCATCCATCAAAGCCATGAGAAAAAAAGATCAGAGAAAATCCACTTCTCCGGGAAAGTCCACCACCGGGCACGACTGCCGTTTCCGCGCCGGCACGGTGTTGGCGGCGTAGATGAAGGAATAATAATCACAACATATACATTATATGAACATTCCCGGAAAATAGGTGAAAATCTGAAGAACCGGGAAGATCTGAGAGTTGGTTTTTGTTATATTTTTTCTTTTTTGGTTTGGGGGGGAGAAAATTATGCAACTGTGAATGAAGTTGTGTTTATGGTGGTGAGGAAGTCTTCGTGTTCATTTTTTTTTCCTGGGATTTTCTCACCTTTTTTTGTTGTTGTTTTTTTTCT CAGCTTCATCACTCCACTTTTTCCCTTTATAAAACTCCGCAACTCATCGGCAATTCCAACTCTCCTCTTTTTCTTCTTCTTTTCTCTCTCTCTCTCTCTCTGAGATTTGAGAAAACTATGGATTCTTCTGTAGCTGCGAGAAGGCCGTATTTCATCGATGAGGACGACGGGTTGGTCTCCTTGGTGGATGTGGAAGCTGGAATTTCTGGAAACCAGAACAGCCACTATCCTCAGCCTTTCTTCCACCGCCCAAGGATTTGCCATGGTGGTACTCACCGGCGAGGCACGAGAAACCTCTCGGTTTCCTCCTCGAGAGTTTCAGCGAGGTTTTATGATGCCAGATTTGAACATCATCATCACCATTTCTTGGAAGCTTGTTTTCTCTGCAAGAAACCGCTCTCTGATAACAAAGACATTTTCATGTACAGAGGAGACACTCCATTTTGCAGCGAAGAGTGTAGAGAAAAGCAAATCGACATGGACGAAGCGAAAGAAAAGAAGTTGAATCTATCATCATCCATCAAAGCCATGAGAAAAAAAGATCAGAGAAAATCCACTTCTCCGGGAAAGTCCACCACCGGGCACGACTGCCGTTTCCGCGCCGGCACGGTGTTGGCGGCGTAG QLHHSTFSLYKTPQLIGNSNSPLFLLLFSLSLSLRFEKTMDSSVAARRPYFIDEDDGLVSLVDVEAGISGNQNSHYPQPFFHRPRICHGGTHRRGTRNLSVSSSRVSARFYDARFEHHHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECREKQIDMDEAKEKKLNLSSSIKAMRKKDQRKSTSPGKSTTGHDCRFRAGTVLAA Homology
BLAST of Carg23643 vs. NCBI nr
Match: KAG7033613.1 (hypothetical protein SDJN02_03337, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 421.0 bits (1081), Expect = 5.9e-114 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Carg23643 vs. NCBI nr
Match: XP_022973263.1 (uncharacterized protein LOC111471819 [Cucurbita maxima] >XP_023541050.1 uncharacterized protein LOC111801327 [Cucurbita pepo subsp. pepo] >KAG6571751.1 FCS-Like Zinc finger 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 347.1 bits (889), Expect = 1.1e-91 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Carg23643 vs. NCBI nr
Match: XP_022932984.1 (uncharacterized protein LOC111439605 [Cucurbita moschata]) HSP 1 Score: 345.1 bits (884), Expect = 4.1e-91 Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Carg23643 vs. NCBI nr
Match: KAA0038523.1 (senescence-associated family protein [Cucumis melo var. makuwa] >TYK31120.1 senescence-associated family protein [Cucumis melo var. makuwa]) HSP 1 Score: 284.6 bits (727), Expect = 6.6e-73 Identity = 143/172 (83.14%), Postives = 151/172 (87.79%), Query Frame = 0
BLAST of Carg23643 vs. NCBI nr
Match: XP_011652677.2 (FCS-Like Zinc finger 2 [Cucumis sativus] >KAE8651463.1 hypothetical protein Csa_000756 [Cucumis sativus]) HSP 1 Score: 283.1 bits (723), Expect = 1.9e-72 Identity = 144/175 (82.29%), Postives = 151/175 (86.29%), Query Frame = 0
BLAST of Carg23643 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.0e-36 Identity = 88/170 (51.76%), Postives = 117/170 (68.82%), Query Frame = 0
BLAST of Carg23643 vs. ExPASy Swiss-Prot
Match: Q9FGQ9 (FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 3.4e-32 Identity = 89/181 (49.17%), Postives = 119/181 (65.75%), Query Frame = 0
BLAST of Carg23643 vs. ExPASy Swiss-Prot
Match: O80506 (FCS-Like Zinc finger 3 OS=Arabidopsis thaliana OX=3702 GN=FLZ3 PE=1 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 6.1e-13 Identity = 45/100 (45.00%), Postives = 57/100 (57.00%), Query Frame = 0
BLAST of Carg23643 vs. ExPASy Swiss-Prot
Match: Q9FH22 (FCS-Like Zinc finger 15 OS=Arabidopsis thaliana OX=3702 GN=FLZ15 PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.8e-09 Identity = 31/69 (44.93%), Postives = 43/69 (62.32%), Query Frame = 0
BLAST of Carg23643 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.1e-09 Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 0
BLAST of Carg23643 vs. ExPASy TrEMBL
Match: A0A6J1ICI7 (uncharacterized protein LOC111471819 OS=Cucurbita maxima OX=3661 GN=LOC111471819 PE=3 SV=1) HSP 1 Score: 347.1 bits (889), Expect = 5.2e-92 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Carg23643 vs. ExPASy TrEMBL
Match: A0A6J1EYH1 (uncharacterized protein LOC111439605 OS=Cucurbita moschata OX=3662 GN=LOC111439605 PE=3 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 2.0e-91 Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Carg23643 vs. ExPASy TrEMBL
Match: A0A5D3E683 (Senescence-associated family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003980 PE=3 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 3.2e-73 Identity = 143/172 (83.14%), Postives = 151/172 (87.79%), Query Frame = 0
BLAST of Carg23643 vs. ExPASy TrEMBL
Match: A0A6J1DNP1 (uncharacterized protein LOC111022896 OS=Momordica charantia OX=3673 GN=LOC111022896 PE=3 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 9.6e-70 Identity = 138/169 (81.66%), Postives = 144/169 (85.21%), Query Frame = 0
BLAST of Carg23643 vs. ExPASy TrEMBL
Match: A0A0A0LIA5 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G911280 PE=3 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 2.8e-69 Identity = 141/175 (80.57%), Postives = 148/175 (84.57%), Query Frame = 0
BLAST of Carg23643 vs. TAIR 10
Match: AT4G17670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 154.8 bits (390), Expect = 7.4e-38 Identity = 88/170 (51.76%), Postives = 117/170 (68.82%), Query Frame = 0
BLAST of Carg23643 vs. TAIR 10
Match: AT5G47060.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 139.8 bits (351), Expect = 2.4e-33 Identity = 89/181 (49.17%), Postives = 119/181 (65.75%), Query Frame = 0
BLAST of Carg23643 vs. TAIR 10
Match: AT2G44670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 75.9 bits (185), Expect = 4.3e-14 Identity = 45/100 (45.00%), Postives = 57/100 (57.00%), Query Frame = 0
BLAST of Carg23643 vs. TAIR 10
Match: AT5G49120.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 64.3 bits (155), Expect = 1.3e-10 Identity = 31/69 (44.93%), Postives = 43/69 (62.32%), Query Frame = 0
BLAST of Carg23643 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 63.5 bits (153), Expect = 2.2e-10 Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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