
Carg23630 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GAAAGTGAGCTCCATGGAAATGGCAAACTTCCATTTAAAATCTCCCAAAAACTATGCGATTCAAGCTGTCCACGAGCTTCATCGAATTCAACAACACCAACACCAACACCAACACCATTGACTGTTAGCTCCTTCCAAATTTCCTCTCAAATAGCCTCTCATTTTCCCCTTTCTTTAATACCCACTTCCGAAAAGGACACTCGTTTCTTCTCTGCTCTTCCAGTCACCCACACGCTCCCTCAGCCCCTTTCGAGCTCTCAAAATGGCTGCCACTGCCCTGCTTCTCTCTCCCTGCTCCATTTTCCCTCTCTGATGGCTCTTTTTCCCCTTCCAAAAAGGTTCGTCGCACTTCCACACAAATGGGTTTCGATTATTTCATCCATTCCCCCAAAGGGTTCTCTTATTTTCCCCTAATTTTTCTGTATTTCTTGGTTTCTTTTGCCATTTTGCTTTCTGGGTCTCTTCTGAATCTGATCTAGCTTCCTCTGTTGAGTTTATGCGTTAATTATCTCGTTTTTCCACATGGGTTCTGGCTTTTGTGCTTCTTCTTGTTGTTTTAAGGACATATGAAGCTAATCTAATGCCCACCCACCATTTGATTCTTATTGTTTGGCTGTCAATTTCTTCGCTGATCTTGGATCTTGATATAATCTAGTTGGATTTGGGATTATTATGCCTAAACTATGATTCATTTCATGACGAATTGTTCTTTGTTTGAACTTACATTCAGCATTCTTTAGCAGTTAGAATGTTGAGATTGAAAGTGCATTGTTCATACACTGTTCACTTATTTTGGCCTAGCTTTGCTTGTGGAACTGTGTAAGGAATCTTATGGGAGGAGTTCATTGAAGGCTCCATTAGGAAAGATCCAAGCATGCTTGTAACTGGAGGGGATCTATTTTGCTGGATTTGCTCCTGTTTTCTTGGATTTATAGAGACATTGATATGTCCTAGATAGAACTTCTACTTGATTGATGGGATGGGGGAACATAGAGAGCTAGAGACTTGATTAGATCCCAAGAATGTGTTAATGCTAGCCTTGTGAAAGATTAGGGAGAAGGAGAAGGACGATTCTACTCGTTTCCGCTCGAGAGTTCTTGGAGTCCCTTGATTTACTAGGTCGTTGGGGACTTGTCAAGAGGAACACGAGCGACTGGTGCTGTTCGAGGTGTTGGTTCTTGTTCTTGTTCTTGTTTTAAGAATGTAGAGATAAGAAACTTGATTGATGCGGTTGGAATTTGACAAACTACGAGGAAAAGTACGATTCTACTCGCCTCGATTTACTAGGTCCTTGGGGACTTGTCAAGATGAACACGAATGACTTGTCCTGTCCGAGGTGTTGGTTCTTGTTCTTGTTTTAAGAATGTAGAGACGAGTTTTTGGTCGACAAACTAGTCTACATTGTCGCGATTTCGTACTTTGATCGGAAACAAACTCAATGTAAACATGCTACTTCAGAGTGAATCCTCTGGCTTTTCATTATAGCTTAAATGAAGTAAATGTGTACTCTTGTTTACAAACTTTACAGGCTGAGCCTACCTGCCAATTGATTCCTGCTTTCACCGTCAACCATGAAAGCTCGATCGGAGAACGGATGGCATTGCATCAAGTCTCTTCACTTTCGAGGTAAACCAGCCAACGATTTGTGCTTGTTGGAGAAGGTGAAGACCTCTGCCGGTACTCCAGGCGAAGCGCCCGTCTATCTTAACGTGTATGACTTAACACCCGCAAATGGCTACGTCTACTGGGCTGGCCTCGGTATATTTCACTCTGGTATCGAAGGTTAGATTATTTCTCGATCATATGGTCTCCTTTGGGCTTTCCCTTTTGGACTTTCTTTCAAGGTTTTTAAAACGCATCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTTGTTCCCCTCTCGAACCGATGTGGGATCTCACAAAGCGTGTTTACGGCCGTTCGTTGCAATTAAGTTGATCTTGTCAAGAGCCTTTACAAATAATTCCCTTTGGACTGTTCCTGTTTTTTATTTGTAGATCATTTAAGGATGTTATTATCTGTGTTTTCAGTTTACGGCATTGAATATGCCTTCGGAGCCCACGACTACCCGACAAGTGGCATCTTTGAGGTCGAACCTCGAACATGCCCCGGCTTCAAGTTTAGGAAGTCAATTTATATCGGTACGACTTGCTTGGACCCAATCCAAGTTAGAGACTTCATGGAGCGTCAAGCTGCAAACTATCACGGCAATTCATATCACTTGATCGTTAAGAATTGCAACCATTTCTGTGAGGATATATGCAGAAAACTAACCGGAAAACGCATACCAAAATGGATTAATCGGCTTGCAAGGATAGGTACACGGATCCTCGTCTCGCTTGCTCGAAATGCTTGTCATTTCATGCTCGATCCTATGTGATGTTAAAACAGGACACCCTTTGATTATGCAGGTTCAAAATGCAACTGCATTCTCCCCAAGGCACTTAAGGCGACAACCATGGAACACGACCCGAGCTTCGAAGGACAGGACAGCGAAAAGAAACGGCTAAGAAGCGGGTTCAGTTGCTTATCCTCAATCTCCATGAATCAGAAGGAAGTTTCAATATCTTCACTGTTTCTACACTCTCATTATAAAGGCTGCCTACCTCCATGGGAGCTGAAAAGATCCAAAAGTTGGTCATTCAAGTAAGGAGAAGACGACCGAACTACCTACCCCGACGATCCGAGCTAGCTGACAAGTTTCTTCTTCCAGCTCTCGAGATAATAGCCATGGGAGCTAACCGGTATGAGCTTTGTTTCTGA GAAAGTGAGCTCCATGGAAATGGCAAACTTCCATTTAAAATCTCCCAAAAACTATGCGATTCAAGCTGTCCACGAGCTTCATCGAATTCAACAACACCAACACCAACACCAACACCATTGACTGTTAGCTCCTTCCAAATTTCCTCTCAAATAGCCTCTCATTTTCCCCTTTCTTTAATACCCACTTCCGAAAAGGACACTCGTTTCTTCTCTGCTCTTCCAGTCACCCACACGCTCCCTCAGCCCCTTTCGAGCTCTCAAAATGGCTGCCACTGCCCTGCTTCTCTCTCCCTGCTCCATTTTCCCTCTCTGATGGCTCTTTTTCCCCTTCCAAAAAGGCTGAGCCTACCTGCCAATTGATTCCTGCTTTCACCGTCAACCATGAAAGCTCGATCGGAGAACGGATGGCATTGCATCAAGTCTCTTCACTTTCGAGGTAAACCAGCCAACGATTTGTGCTTGTTGGAGAAGGTGAAGACCTCTGCCGGTACTCCAGGCGAAGCGCCCGTCTATCTTAACGTGTATGACTTAACACCCGCAAATGGCTACGTCTACTGGGCTGGCCTCGGTATATTTCACTCTGGTATCGAAGTTTACGGCATTGAATATGCCTTCGGAGCCCACGACTACCCGACAAGTGGCATCTTTGAGGTCGAACCTCGAACATGCCCCGGCTTCAAGTTTAGGAAGTCAATTTATATCGGTACGACTTGCTTGGACCCAATCCAAGTTAGAGACTTCATGGAGCGTCAAGCTGCAAACTATCACGGCAATTCATATCACTTGATCGTTAAGAATTGCAACCATTTCTGTGAGGATATATGCAGAAAACTAACCGGAAAACGCATACCAAAATGGATTAATCGGCTTGCAAGGATAGGTTCAAAATGCAACTGCATTCTCCCCAAGGCACTTAAGGCGACAACCATGGAACACGACCCGAGCTTCGAAGGACAGGACAGCGAAAAGAAACGGCTAAGAAGCGGGCTGCCTACCTCCATGGGAGCTGAAAAGATCCAAAAGTTGGTCATTCAAGTAAGGAGAAGACGACCGAACTACCTACCCCGACGATCCGAGCTAGCTGACAAGTTTCTTCTTCCAGCTCTCGAGATAATAGCCATGGGAGCTAACCGGTATGAGCTTTGTTTCTGA ATGAAAGCTCGATCGGAGAACGGATGGCATTGCATCAAGTCTCTTCACTTTCGAGGTAAACCAGCCAACGATTTGTGCTTGTTGGAGAAGGTGAAGACCTCTGCCGGTACTCCAGGCGAAGCGCCCGTCTATCTTAACGTGTATGACTTAACACCCGCAAATGGCTACGTCTACTGGGCTGGCCTCGGTATATTTCACTCTGGTATCGAAGTTTACGGCATTGAATATGCCTTCGGAGCCCACGACTACCCGACAAGTGGCATCTTTGAGGTCGAACCTCGAACATGCCCCGGCTTCAAGTTTAGGAAGTCAATTTATATCGGTACGACTTGCTTGGACCCAATCCAAGTTAGAGACTTCATGGAGCGTCAAGCTGCAAACTATCACGGCAATTCATATCACTTGATCGTTAAGAATTGCAACCATTTCTGTGAGGATATATGCAGAAAACTAACCGGAAAACGCATACCAAAATGGATTAATCGGCTTGCAAGGATAGGTTCAAAATGCAACTGCATTCTCCCCAAGGCACTTAAGGCGACAACCATGGAACACGACCCGAGCTTCGAAGGACAGGACAGCGAAAAGAAACGGCTAAGAAGCGGGCTGCCTACCTCCATGGGAGCTGAAAAGATCCAAAAGTTGGTCATTCAAGTAAGGAGAAGACGACCGAACTACCTACCCCGACGATCCGAGCTAGCTGACAAGTTTCTTCTTCCAGCTCTCGAGATAATAGCCATGGGAGCTAACCGGTATGAGCTTTGTTTCTGA MKARSENGWHCIKSLHFRGKPANDLCLLEKVKTSAGTPGEAPVYLNVYDLTPANGYVYWAGLGIFHSGIEVYGIEYAFGAHDYPTSGIFEVEPRTCPGFKFRKSIYIGTTCLDPIQVRDFMERQAANYHGNSYHLIVKNCNHFCEDICRKLTGKRIPKWINRLARIGSKCNCILPKALKATTMEHDPSFEGQDSEKKRLRSGLPTSMGAEKIQKLVIQVRRRRPNYLPRRSELADKFLLPALEIIAMGANRYELCF Homology
BLAST of Carg23630 vs. NCBI nr
Match: KAG7010950.1 (DeSI-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 544.3 bits (1401), Expect = 5.7e-151 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0
BLAST of Carg23630 vs. NCBI nr
Match: KAG6571139.1 (DeSI-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 532.3 bits (1370), Expect = 2.2e-147 Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0
BLAST of Carg23630 vs. NCBI nr
Match: XP_022943930.1 (deSI-like protein At4g17486 [Cucurbita moschata] >XP_023513408.1 deSI-like protein At4g17486 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 439.1 bits (1128), Expect = 2.6e-119 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0
BLAST of Carg23630 vs. NCBI nr
Match: XP_022986593.1 (deSI-like protein At4g17486 [Cucurbita maxima]) HSP 1 Score: 432.2 bits (1110), Expect = 3.2e-117 Identity = 201/216 (93.06%), Postives = 204/216 (94.44%), Query Frame = 0
BLAST of Carg23630 vs. NCBI nr
Match: XP_004145342.1 (deSI-like protein At4g17486 [Cucumis sativus] >XP_011649218.1 deSI-like protein At4g17486 [Cucumis sativus] >KGN61763.1 hypothetical protein Csa_006760 [Cucumis sativus]) HSP 1 Score: 419.5 bits (1077), Expect = 2.1e-113 Identity = 194/216 (89.81%), Postives = 199/216 (92.13%), Query Frame = 0
BLAST of Carg23630 vs. ExPASy Swiss-Prot
Match: Q93VG8 (DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 6.5e-57 Identity = 95/179 (53.07%), Postives = 126/179 (70.39%), Query Frame = 0
BLAST of Carg23630 vs. ExPASy Swiss-Prot
Match: A3QRX8 (Deubiquitinase DESI2 OS=Sus scrofa OX=9823 GN=DESI2 PE=2 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 3.1e-30 Identity = 70/175 (40.00%), Postives = 97/175 (55.43%), Query Frame = 0
BLAST of Carg23630 vs. ExPASy Swiss-Prot
Match: Q5XIT6 (Deubiquitinase DESI2 OS=Rattus norvegicus OX=10116 GN=Desi2 PE=2 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 8.9e-30 Identity = 69/175 (39.43%), Postives = 97/175 (55.43%), Query Frame = 0
BLAST of Carg23630 vs. ExPASy Swiss-Prot
Match: Q9BSY9 (Deubiquitinase DESI2 OS=Homo sapiens OX=9606 GN=DESI2 PE=1 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 2.0e-29 Identity = 67/159 (42.14%), Postives = 90/159 (56.60%), Query Frame = 0
BLAST of Carg23630 vs. ExPASy Swiss-Prot
Match: Q9D291 (Deubiquitinase DESI2 OS=Mus musculus OX=10090 GN=Desi2 PE=1 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 2.0e-29 Identity = 67/159 (42.14%), Postives = 90/159 (56.60%), Query Frame = 0
BLAST of Carg23630 vs. ExPASy TrEMBL
Match: A0A6J1FYD4 (deSI-like protein At4g17486 OS=Cucurbita moschata OX=3662 GN=LOC111448503 PE=3 SV=1) HSP 1 Score: 439.1 bits (1128), Expect = 1.3e-119 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0
BLAST of Carg23630 vs. ExPASy TrEMBL
Match: A0A6J1JGZ4 (deSI-like protein At4g17486 OS=Cucurbita maxima OX=3661 GN=LOC111484288 PE=3 SV=1) HSP 1 Score: 432.2 bits (1110), Expect = 1.5e-117 Identity = 201/216 (93.06%), Postives = 204/216 (94.44%), Query Frame = 0
BLAST of Carg23630 vs. ExPASy TrEMBL
Match: A0A0A0LIW5 (PPPDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G238790 PE=3 SV=1) HSP 1 Score: 419.5 bits (1077), Expect = 1.0e-113 Identity = 194/216 (89.81%), Postives = 199/216 (92.13%), Query Frame = 0
BLAST of Carg23630 vs. ExPASy TrEMBL
Match: A0A1S3C991 (deSI-like protein At4g17486 OS=Cucumis melo OX=3656 GN=LOC103498430 PE=3 SV=1) HSP 1 Score: 417.9 bits (1073), Expect = 3.0e-113 Identity = 193/216 (89.35%), Postives = 198/216 (91.67%), Query Frame = 0
BLAST of Carg23630 vs. ExPASy TrEMBL
Match: A0A5A7TWW4 (DeSI-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G001280 PE=3 SV=1) HSP 1 Score: 417.9 bits (1073), Expect = 3.0e-113 Identity = 193/216 (89.35%), Postives = 198/216 (91.67%), Query Frame = 0
BLAST of Carg23630 vs. TAIR 10
Match: AT1G47740.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 294.7 bits (753), Expect = 7.4e-80 Identity = 130/203 (64.04%), Postives = 160/203 (78.82%), Query Frame = 0
BLAST of Carg23630 vs. TAIR 10
Match: AT1G47740.2 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 294.7 bits (753), Expect = 7.4e-80 Identity = 130/203 (64.04%), Postives = 160/203 (78.82%), Query Frame = 0
BLAST of Carg23630 vs. TAIR 10
Match: AT5G25170.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 237.3 bits (604), Expect = 1.4e-62 Identity = 110/179 (61.45%), Postives = 128/179 (71.51%), Query Frame = 0
BLAST of Carg23630 vs. TAIR 10
Match: AT1G80690.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 228.8 bits (582), Expect = 5.0e-60 Identity = 112/208 (53.85%), Postives = 142/208 (68.27%), Query Frame = 0
BLAST of Carg23630 vs. TAIR 10
Match: AT2G25190.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 223.0 bits (567), Expect = 2.7e-58 Identity = 101/177 (57.06%), Postives = 124/177 (70.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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