Carg23617 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23617
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Phytocyanin domain-containing protein
Location	Carg_Chr20: 4514516 .. 4515300 (+)
RNA-Seq Expression	Carg23617
Synteny	Carg23617

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTTCATATCTTCAAAACTACTCATTCTCTTCATTTGGGCATGCCTTTCAACCCTATCCTCTGCCAATCAGCCTTGGTTTTGGGCACATAATTGCTCTTCCCCTTTCAACCCTAACCACAACCCGTCTCCGCCACCACCTACATCACCAACCTCTCGAACACCGCCATCACAATCCCTACCACCATCACCACCAAGATCACGACGTCCTCGAACACCACCATCACAACAAATGCCATCACCACCACCACCATCACCACAACTGCCACCACCACCACCACCACAATCACGACGGTCACGAACACCACCATCCCGACAGCAATCACCGCCACCAACCCCACCATCCCGAAAGATCATAGTAGGTGGCTCAGAGCATTGGCATCTCGGCTTCGACTATAATGATTGGGCACTTAAGAACGGTCCCTTCCATATAAATGACATCCTAGGTAACCCTTATTGATCACATTTTCAATGTTATTATAAGAATTTTTCATTCTCCAACTTACTTGGAAGTTGTTGTTGGCAGTATTCAAATACGATCCTCCAAACAGTACAACTCCGGCTCACAGTGTCTATCAGCTCCCAAACATGAGAAGCTTCGTCAACTGTGATTTGGGAAAGGCCAAAATGCTTGCTAATTCAACACAAGGAAGTACTGAAAATGGCTTTGAATTTCAGCTCAAACACCAAAATCCTTACTACTTTGCTTGTGGAGAAGCCAATGGCTTCCATTGCCAAACTGGATCCATGAAGTTCACCCTAACACCAATACTTCAAGGTTGA

mRNA sequence

ATGCCTTTCATATCTTCAAAACTACTCATTCTCTTCATTTGGGCATGCCTTTCAACCCTATCCTCTGCCAATCAGCCTTGGTTTTGGGCACATAATTGCTCTTCCCCTTTCAACCCTAACCACAACCCGTCTCCGCCACCACCTACATCACCAACCTCTCGAACACCGCCATCACAATCCCTACCACCATCACCACCAAGATCACGACGTCCTCGAACACCACCATCACAACAAATGCCATCACCACCACCACCATCACCACAACTGCCACCACCACCACCACCACAATCACGACGGTCACGAACACCACCATCCCGACAGCAATCACCGCCACCAACCCCACCATCCCGAAAGATCATAGTAGGTGGCTCAGAGCATTGGCATCTCGGCTTCGACTATAATGATTGGGCACTTAAGAACGGTCCCTTCCATATAAATGACATCCTAGTATTCAAATACGATCCTCCAAACAGTACAACTCCGGCTCACAGTGTCTATCAGCTCCCAAACATGAGAAGCTTCGTCAACTGTGATTTGGGAAAGGCCAAAATGCTTGCTAATTCAACACAAGGAAGTACTGAAAATGGCTTTGAATTTCAGCTCAAACACCAAAATCCTTACTACTTTGCTTGTGGAGAAGCCAATGGCTTCCATTGCCAAACTGGATCCATGAAGTTCACCCTAACACCAATACTTCAAGGTTGA

Coding sequence (CDS)

ATGCCTTTCATATCTTCAAAACTACTCATTCTCTTCATTTGGGCATGCCTTTCAACCCTATCCTCTGCCAATCAGCCTTGGTTTTGGGCACATAATTGCTCTTCCCCTTTCAACCCTAACCACAACCCGTCTCCGCCACCACCTACATCACCAACCTCTCGAACACCGCCATCACAATCCCTACCACCATCACCACCAAGATCACGACGTCCTCGAACACCACCATCACAACAAATGCCATCACCACCACCACCATCACCACAACTGCCACCACCACCACCACCACAATCACGACGGTCACGAACACCACCATCCCGACAGCAATCACCGCCACCAACCCCACCATCCCGAAAGATCATAGTAGGTGGCTCAGAGCATTGGCATCTCGGCTTCGACTATAATGATTGGGCACTTAAGAACGGTCCCTTCCATATAAATGACATCCTAGTATTCAAATACGATCCTCCAAACAGTACAACTCCGGCTCACAGTGTCTATCAGCTCCCAAACATGAGAAGCTTCGTCAACTGTGATTTGGGAAAGGCCAAAATGCTTGCTAATTCAACACAAGGAAGTACTGAAAATGGCTTTGAATTTCAGCTCAAACACCAAAATCCTTACTACTTTGCTTGTGGAGAAGCCAATGGCTTCCATTGCCAAACTGGATCCATGAAGTTCACCCTAACACCAATACTTCAAGGTTGA

Protein sequence

MPFISSKLLILFIWACLSTLSSANQPWFWAHNCSSPFNPNHNPSPPPPTSPTSRTPPSQSLPPSPPRSRRPRTPPSQQMPSPPPPSPQLPPPPPPQSRRSRTPPSRQQSPPPTPPSRKIIVGGSEHWHLGFDYNDWALKNGPFHINDILVFKYDPPNSTTPAHSVYQLPNMRSFVNCDLGKAKMLANSTQGSTENGFEFQLKHQNPYYFACGEANGFHCQTGSMKFTLTPILQG

Homology

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BLAST of Carg23617 vs. NCBI nr
Match: KAG7010963.1 (hypothetical protein SDJN02_27761, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 467.2 bits (1201), Expect = 8.1e-128
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 0


Query: 1   MPFISSKLLILFIWACLSTLSSANQPWFWAHNCSSPFNPNHNPSPPPPTSPTSRTPPSQS 60
           MPFISSKLLILFIWACLSTLSSANQPWFWAHNCSSPFNPNHNPSPPPPTSPTSRTPPSQS
Sbjct: 1   MPFISSKLLILFIWACLSTLSSANQPWFWAHNCSSPFNPNHNPSPPPPTSPTSRTPPSQS 60

Query: 61  LPPSPPRSRRPRTPPSQQMPSPPPPSPQLPPPPPPQSRRSRTPPSRQQSPPPTPPSRKII 120
           LPPSPPRSRRPRTPPSQQMPSPPPPSPQLPPPPPPQSRRSRTPPSRQQSPPPTPPSRKII
Sbjct: 61  LPPSPPRSRRPRTPPSQQMPSPPPPSPQLPPPPPPQSRRSRTPPSRQQSPPPTPPSRKII 120

Query: 121 VGGSEHWHLGFDYNDWALKNGPFHINDILVFKYDPPNSTTPAHSVYQLPNMRSFVNCDLG 180
           VGGSEHWHLGFDYNDWALKNGPFHINDILVFKYDPPNSTTPAHSVYQLPNMRSFVNCDLG
Sbjct: 121 VGGSEHWHLGFDYNDWALKNGPFHINDILVFKYDPPNSTTPAHSVYQLPNMRSFVNCDLG 180

Query: 181 KAKMLANSTQGSTENGFEFQLKHQNPYYFACGEANGFHCQTGSMKFTLTPILQG 235
           KAKMLANSTQGSTENGFEFQLKHQNPYYFACGEANGFHCQTGSMKFTLTPILQG
Sbjct: 181 KAKMLANSTQGSTENGFEFQLKHQNPYYFACGEANGFHCQTGSMKFTLTPILQG 234

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BLAST of Carg23617 vs. NCBI nr
Match: XP_022944052.1 (alpha carbonic anhydrase 8-like [Cucurbita moschata])

HSP 1 Score: 436.8 bits (1122), Expect = 1.2e-118
Identity = 226/247 (91.50%), Postives = 229/247 (92.71%), Query Frame = 0


Query: 1   MPFISSKLLILFIWACLSTLSSANQPWFWAHNCSSPFNPNHNPSPPPPTSPTSRTPPSQS 60
           MP ISSKLLILFIWACLSTLSSANQPWFWAHNCSSPFNP H+PSPPPPTSPTSRTPPSQS
Sbjct: 1   MPSISSKLLILFIWACLSTLSSANQPWFWAHNCSSPFNPTHHPSPPPPTSPTSRTPPSQS 60

Query: 61  LPPSPPRSRRPRTPPSQQMPSPPPPSPQLPPPP----------PPQSRRSRTPPSRQQS- 120
           LPPSPPRSRRPRTPPSQQMPSPPPPSPQLPPPP          PP+SR  RTPPS+Q S 
Sbjct: 61  LPPSPPRSRRPRTPPSQQMPSPPPPSPQLPPPPPPPRSQRPRTPPRSRGPRTPPSQQSSP 120

Query: 121 --PPPTPPSRKIIVGGSEHWHLGFDYNDWALKNGPFHINDILVFKYDPPNSTTPAHSVYQ 180
             PPPTPPSRKIIVGGSEHWHLGFDYNDWALKNGPFHINDILVFKYDPPNSTTPAHSVYQ
Sbjct: 121 PPPPPTPPSRKIIVGGSEHWHLGFDYNDWALKNGPFHINDILVFKYDPPNSTTPAHSVYQ 180

Query: 181 LPNMRSFVNCDLGKAKMLANSTQGSTENGFEFQLKHQNPYYFACGEANGFHCQTGSMKFT 235
           LPNMRSFVNCDLGKAKMLANSTQGSTENGFEFQLKHQNPYYFACGEANGFHCQTGSMKFT
Sbjct: 181 LPNMRSFVNCDLGKAKMLANSTQGSTENGFEFQLKHQNPYYFACGEANGFHCQTGSMKFT 240

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BLAST of Carg23617 vs. NCBI nr
Match: XP_038902031.1 (extensin-3-like [Benincasa hispida])

HSP 1 Score: 261.5 bits (667), Expect = 6.8e-66
Identity = 175/320 (54.69%), Postives = 195/320 (60.94%), Query Frame = 0


Query: 1   MPFISSKLLILFIWACLSTLSSANQPWFWAHNCS---SP------FNPNHNPSPPPPTSP 60
           M FI SK++ILFIWAC STLSSAN   F  +N +   SP      F P+  PS  PPT P
Sbjct: 1   MAFIYSKVIILFIWACFSTLSSANVGRFRGYNSTLNRSPPPPLRRFPPSPPPSRRPPTPP 60

Query: 61  T----------SRTPPSQSLPPSPPRSRRPRTPPSQQMPSPP-----PPSP--------- 120
           +           RTPPS+  PP PP SRRPRTPPSQ +P PP     PPSP         
Sbjct: 61  SRRFPPPPSHHPRTPPSRQFPPPPP-SRRPRTPPSQWLPPPPRHPRTPPSPRHPRTPPLV 120

Query: 121 ----------------QLPPP----------------PPPQSRRSRTPPSRQQSPPP--- 180
                           Q PPP                PPPQSRR RTPPS++  PPP   
Sbjct: 121 LSSPPPPSRRCRTPPQQSPPPSPPSQQPQTPPSPMMSPPPQSRRPRTPPSQKIPPPPPSV 180

Query: 181 --------TPPS----------RKIIVGGSEHWHLGFDYNDWALKNGPFHINDILVFKYD 235
                    PPS          RKIIVGGS+ W LGFDYNDWALKNGPF++NDILVFKYD
Sbjct: 181 PSPSPLPSLPPSPSPLPIPQSPRKIIVGGSKQWQLGFDYNDWALKNGPFYVNDILVFKYD 240

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BLAST of Carg23617 vs. NCBI nr
Match: XP_011649199.1 (leucine-rich repeat extensin-like protein 3 [Cucumis sativus] >KGN61733.1 hypothetical protein Csa_006192 [Cucumis sativus])

HSP 1 Score: 255.0 bits (650), Expect = 6.3e-64
Identity = 165/294 (56.12%), Postives = 181/294 (61.56%), Query Frame = 0


Query: 1   MPFISSKLLILFIWACLSTLSSANQ-PWFWAH-NCSSPFNPNHNPSPPPP---------- 60
           M FISSKL+ILFIWAC+STL SAN   WFW   NC+    P H PS PPP          
Sbjct: 1   MAFISSKLIILFIWACISTLCSANNGGWFWGRPNCTVSSIPCHKPSLPPPLRRLPPSRYP 60

Query: 61  -TSPTS----------RTPPSQS---LPPSPPRSRRPRTPPSQQMP-----------SPP 120
            T P+           RTPPSQ    LPP PP  R PRTPP  + P           SPP
Sbjct: 61  RTPPSRRFPPPPSRRLRTPPSQRCPLLPPPPPPPRHPRTPPPSRRPRTPPPPPPMLSSPP 120

Query: 121 PPSPQLPPPPPPQSRRSR--------TPPSRQQSPPPTPPS----------------RKI 180
           PPSP + PPPP +  R R         PPS    P P+PPS                RKI
Sbjct: 121 PPSPIVSPPPPQRRPRPRPRPPPFQPIPPSPPSLPSPSPPSPSPSLPPSPQPTPQSPRKI 180

Query: 181 IVGGSEHWHLGFDYNDWALKNGPFHINDILVFKYDPPNSTTPAHSVYQLPNMRSFVNCDL 234
           IVGGS  W LGFDY DWALKNGPF++NDILVFKYDPPN +TP H+VY LPNMRS  NCD 
Sbjct: 181 IVGGSNQWQLGFDYTDWALKNGPFYVNDILVFKYDPPNRSTPPHNVYLLPNMRSLANCDF 240

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BLAST of Carg23617 vs. NCBI nr
Match: XP_022947109.1 (extensin-like isoform X4 [Cucurbita moschata])

HSP 1 Score: 226.5 bits (576), Expect = 2.4e-55
Identity = 143/248 (57.66%), Postives = 166/248 (66.94%), Query Frame = 0


Query: 1   MPFISSKLLILFIWACLSTLSSANQPWFWAHNCSSPFNPNH-NPSPPPPTSPTSRTPPSQ 60
           M  I S +++LF+ AC+STLSSA+  WF A N +  F+  H  P  PPP S     PP +
Sbjct: 1   MASIFSNVIVLFVLACMSTLSSADPSWFRARNTTFLFSSRHKRPRFPPPPSRCLPQPPWR 60

Query: 61  SLPPSPP--RSRRPRTPPSQ--QMPSPPPPSPQLPPPPPPQSRRSRTPPSRQQSP----P 120
            LPPSPP  R R+PRTPP    Q P  PP  P+ P  PPP  RR RTPP R   P    P
Sbjct: 61  CLPPSPPPSRPRQPRTPPPSRPQKPRTPPSRPRQPRTPPP--RRPRTPPPRWFPPLPPRP 120

Query: 121 PTPPS---------RKIIVGGSEHWHLGFDYNDWALKNGPFHINDILVFKYDPPNSTTPA 180
            TPPS         RKIIVGGS++W LGFDYNDW LKNGPF++NDILVFKYDPPNS+TP 
Sbjct: 121 RTPPSSPLPTPQNPRKIIVGGSKYWRLGFDYNDWILKNGPFYVNDILVFKYDPPNSSTPP 180

Query: 181 HSVYQLPNMRSFVNCDLGKAKMLANSTQGSTENGFEFQLKHQNPYYFACGEANGFHCQTG 231
           H+VY LPNM+S   CD  +AK++AN TQGS  NGF F LK Q  YYFACGE NGFHC  G
Sbjct: 181 HNVYLLPNMQSLNKCDFRRAKLVANLTQGS-GNGFNFVLKQQKAYYFACGEGNGFHCNLG 240

[Close]

BLAST of Carg23617 vs. ExPASy TrEMBL
Match: A0A6J1FUQ3 (alpha carbonic anhydrase 8-like OS=Cucurbita moschata OX=3662 GN=LOC111448602 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 5.7e-119
Identity = 226/247 (91.50%), Postives = 229/247 (92.71%), Query Frame = 0


Query: 1   MPFISSKLLILFIWACLSTLSSANQPWFWAHNCSSPFNPNHNPSPPPPTSPTSRTPPSQS 60
           MP ISSKLLILFIWACLSTLSSANQPWFWAHNCSSPFNP H+PSPPPPTSPTSRTPPSQS
Sbjct: 1   MPSISSKLLILFIWACLSTLSSANQPWFWAHNCSSPFNPTHHPSPPPPTSPTSRTPPSQS 60

Query: 61  LPPSPPRSRRPRTPPSQQMPSPPPPSPQLPPPP----------PPQSRRSRTPPSRQQS- 120
           LPPSPPRSRRPRTPPSQQMPSPPPPSPQLPPPP          PP+SR  RTPPS+Q S 
Sbjct: 61  LPPSPPRSRRPRTPPSQQMPSPPPPSPQLPPPPPPPRSQRPRTPPRSRGPRTPPSQQSSP 120

Query: 121 --PPPTPPSRKIIVGGSEHWHLGFDYNDWALKNGPFHINDILVFKYDPPNSTTPAHSVYQ 180
             PPPTPPSRKIIVGGSEHWHLGFDYNDWALKNGPFHINDILVFKYDPPNSTTPAHSVYQ
Sbjct: 121 PPPPPTPPSRKIIVGGSEHWHLGFDYNDWALKNGPFHINDILVFKYDPPNSTTPAHSVYQ 180

Query: 181 LPNMRSFVNCDLGKAKMLANSTQGSTENGFEFQLKHQNPYYFACGEANGFHCQTGSMKFT 235
           LPNMRSFVNCDLGKAKMLANSTQGSTENGFEFQLKHQNPYYFACGEANGFHCQTGSMKFT
Sbjct: 181 LPNMRSFVNCDLGKAKMLANSTQGSTENGFEFQLKHQNPYYFACGEANGFHCQTGSMKFT 240

[Close]

BLAST of Carg23617 vs. ExPASy TrEMBL
Match: A0A0A0LIT9 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G234585 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 3.1e-64
Identity = 165/294 (56.12%), Postives = 181/294 (61.56%), Query Frame = 0


Query: 1   MPFISSKLLILFIWACLSTLSSANQ-PWFWAH-NCSSPFNPNHNPSPPPP---------- 60
           M FISSKL+ILFIWAC+STL SAN   WFW   NC+    P H PS PPP          
Sbjct: 1   MAFISSKLIILFIWACISTLCSANNGGWFWGRPNCTVSSIPCHKPSLPPPLRRLPPSRYP 60

Query: 61  -TSPTS----------RTPPSQS---LPPSPPRSRRPRTPPSQQMP-----------SPP 120
            T P+           RTPPSQ    LPP PP  R PRTPP  + P           SPP
Sbjct: 61  RTPPSRRFPPPPSRRLRTPPSQRCPLLPPPPPPPRHPRTPPPSRRPRTPPPPPPMLSSPP 120

Query: 121 PPSPQLPPPPPPQSRRSR--------TPPSRQQSPPPTPPS----------------RKI 180
           PPSP + PPPP +  R R         PPS    P P+PPS                RKI
Sbjct: 121 PPSPIVSPPPPQRRPRPRPRPPPFQPIPPSPPSLPSPSPPSPSPSLPPSPQPTPQSPRKI 180

Query: 181 IVGGSEHWHLGFDYNDWALKNGPFHINDILVFKYDPPNSTTPAHSVYQLPNMRSFVNCDL 234
           IVGGS  W LGFDY DWALKNGPF++NDILVFKYDPPN +TP H+VY LPNMRS  NCD 
Sbjct: 181 IVGGSNQWQLGFDYTDWALKNGPFYVNDILVFKYDPPNRSTPPHNVYLLPNMRSLANCDF 240

[Close]

BLAST of Carg23617 vs. ExPASy TrEMBL
Match: A0A6J1G5T9 (extensin-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111451078 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.2e-55
Identity = 143/248 (57.66%), Postives = 166/248 (66.94%), Query Frame = 0


Query: 1   MPFISSKLLILFIWACLSTLSSANQPWFWAHNCSSPFNPNH-NPSPPPPTSPTSRTPPSQ 60
           M  I S +++LF+ AC+STLSSA+  WF A N +  F+  H  P  PPP S     PP +
Sbjct: 1   MASIFSNVIVLFVLACMSTLSSADPSWFRARNTTFLFSSRHKRPRFPPPPSRCLPQPPWR 60

Query: 61  SLPPSPP--RSRRPRTPPSQ--QMPSPPPPSPQLPPPPPPQSRRSRTPPSRQQSP----P 120
            LPPSPP  R R+PRTPP    Q P  PP  P+ P  PPP  RR RTPP R   P    P
Sbjct: 61  CLPPSPPPSRPRQPRTPPPSRPQKPRTPPSRPRQPRTPPP--RRPRTPPPRWFPPLPPRP 120

Query: 121 PTPPS---------RKIIVGGSEHWHLGFDYNDWALKNGPFHINDILVFKYDPPNSTTPA 180
            TPPS         RKIIVGGS++W LGFDYNDW LKNGPF++NDILVFKYDPPNS+TP 
Sbjct: 121 RTPPSSPLPTPQNPRKIIVGGSKYWRLGFDYNDWILKNGPFYVNDILVFKYDPPNSSTPP 180

Query: 181 HSVYQLPNMRSFVNCDLGKAKMLANSTQGSTENGFEFQLKHQNPYYFACGEANGFHCQTG 231
           H+VY LPNM+S   CD  +AK++AN TQGS  NGF F LK Q  YYFACGE NGFHC  G
Sbjct: 181 HNVYLLPNMQSLNKCDFRRAKLVANLTQGS-GNGFNFVLKQQKAYYFACGEGNGFHCNLG 240

[Close]

BLAST of Carg23617 vs. ExPASy TrEMBL
Match: A0A6J1G5W9 (extensin-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451078 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.2e-55
Identity = 143/248 (57.66%), Postives = 166/248 (66.94%), Query Frame = 0


Query: 1   MPFISSKLLILFIWACLSTLSSANQPWFWAHNCSSPFNPNH-NPSPPPPTSPTSRTPPSQ 60
           M  I S +++LF+ AC+STLSSA+  WF A N +  F+  H  P  PPP S     PP +
Sbjct: 1   MASIFSNVIVLFVLACMSTLSSADPSWFRARNTTFLFSSRHKRPRFPPPPSRCLPQPPWR 60

Query: 61  SLPPSPP--RSRRPRTPPSQ--QMPSPPPPSPQLPPPPPPQSRRSRTPPSRQQSP----P 120
            LPPSPP  R R+PRTPP    Q P  PP  P+ P  PPP  RR RTPP R   P    P
Sbjct: 61  CLPPSPPPSRPRQPRTPPPSRPQKPRTPPSRPRQPRTPPP--RRPRTPPPRWFPPLPPRP 120

Query: 121 PTPPS---------RKIIVGGSEHWHLGFDYNDWALKNGPFHINDILVFKYDPPNSTTPA 180
            TPPS         RKIIVGGS++W LGFDYNDW LKNGPF++NDILVFKYDPPNS+TP 
Sbjct: 121 RTPPSSPLPTPQNPRKIIVGGSKYWRLGFDYNDWILKNGPFYVNDILVFKYDPPNSSTPP 180

Query: 181 HSVYQLPNMRSFVNCDLGKAKMLANSTQGSTENGFEFQLKHQNPYYFACGEANGFHCQTG 231
           H+VY LPNM+S   CD  +AK++AN TQGS  NGF F LK Q  YYFACGE NGFHC  G
Sbjct: 181 HNVYLLPNMQSLNKCDFRRAKLVANLTQGS-GNGFNFVLKQQKAYYFACGEGNGFHCNLG 240

[Close]

BLAST of Carg23617 vs. ExPASy TrEMBL
Match: A0A6J1G5G3 (extensin-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451078 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.2e-55
Identity = 143/248 (57.66%), Postives = 166/248 (66.94%), Query Frame = 0


Query: 1   MPFISSKLLILFIWACLSTLSSANQPWFWAHNCSSPFNPNH-NPSPPPPTSPTSRTPPSQ 60
           M  I S +++LF+ AC+STLSSA+  WF A N +  F+  H  P  PPP S     PP +
Sbjct: 1   MASIFSNVIVLFVLACMSTLSSADPSWFRARNTTFLFSSRHKRPRFPPPPSRCLPQPPWR 60

Query: 61  SLPPSPP--RSRRPRTPPSQ--QMPSPPPPSPQLPPPPPPQSRRSRTPPSRQQSP----P 120
            LPPSPP  R R+PRTPP    Q P  PP  P+ P  PPP  RR RTPP R   P    P
Sbjct: 61  CLPPSPPPSRPRQPRTPPPSRPQKPRTPPSRPRQPRTPPP--RRPRTPPPRWFPPLPPRP 120

Query: 121 PTPPS---------RKIIVGGSEHWHLGFDYNDWALKNGPFHINDILVFKYDPPNSTTPA 180
            TPPS         RKIIVGGS++W LGFDYNDW LKNGPF++NDILVFKYDPPNS+TP 
Sbjct: 121 RTPPSSPLPTPQNPRKIIVGGSKYWRLGFDYNDWILKNGPFYVNDILVFKYDPPNSSTPP 180

Query: 181 HSVYQLPNMRSFVNCDLGKAKMLANSTQGSTENGFEFQLKHQNPYYFACGEANGFHCQTG 231
           H+VY LPNM+S   CD  +AK++AN TQGS  NGF F LK Q  YYFACGE NGFHC  G
Sbjct: 181 HNVYLLPNMQSLNKCDFRRAKLVANLTQGS-GNGFNFVLKQQKAYYFACGEGNGFHCNLG 240

[Close]

BLAST of Carg23617 vs. TAIR 10
Match: AT2G15780.1 (Cupredoxin superfamily protein )

HSP 1 Score: 141.7 bits (356), Expect = 7.3e-34
Identity = 66/116 (56.90%), Postives = 81/116 (69.83%), Query Frame = 0


Query: 117 RKIIVGGSEHWHLGFDYNDWALKNGPFHINDILVFKYDPPNSTTPAHSVYQLPNMRSFVN 176
           RKIIVGG + W  GF+Y DWA K  PF +NDILVFKY+PP   T  HSVY LPN  S+  
Sbjct: 142 RKIIVGGDKEWTYGFNYADWASKTAPFFLNDILVFKYNPPAPFT--HSVYLLPNPSSYEK 201

Query: 177 CDLGKAKMLANSTQGSTENGFEFQLKHQNPYYFACGEANGFHCQTGSMKFTLTPIL 233
           CD+ K KM+A+  QG+ + GFEF LK   PYY +CGE +G HC  G+MKFT+ P+L
Sbjct: 202 CDVKKGKMIASPKQGAGK-GFEFVLKQMKPYYISCGEHDGAHCSNGTMKFTVMPML 254

[Close]

BLAST of Carg23617 vs. TAIR 10
Match: AT2G15770.1 (Cupredoxin superfamily protein )

HSP 1 Score: 120.6 bits (301), Expect = 1.7e-27
Identity = 55/116 (47.41%), Postives = 78/116 (67.24%), Query Frame = 0


Query: 117 RKIIVGGSEHWHLGFDYNDWALKNGPFHINDILVFKYDPPNSTTPAHSVYQLPNMRSFVN 176
           +KIIVGGS+ W  G DY DWA KN PF++ND+LVFKYD   S    ++VY   +  S++N
Sbjct: 144 KKIIVGGSDGWKKGLDYKDWASKNAPFYVNDVLVFKYD--KSAKRRNNVYLFKDRWSYMN 203

Query: 177 CDLGKAKMLANSTQGSTENGFEFQLKHQNPYYFACGEANGFHCQTGSMKFTLTPIL 233
           CD+  A+ + ++ +GS E  F F LK   PY+FA GE +G +C+  +MKFT+ P+L
Sbjct: 204 CDIKNARKIGSTRKGS-EESFNFTLKKIQPYFFASGEHDGDYCRNHNMKFTIFPVL 256

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BLAST of Carg23617 vs. TAIR 10
Match: AT4G33930.1 (Cupredoxin superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 3.4e-15
Identity = 50/143 (34.97%), Postives = 73/143 (51.05%), Query Frame = 0


Query: 97  SRRSRTPPSRQQSPPPTPPSRKIIVGGSEHWHLGFDYNDWALKNGPFHINDILVFKYDPP 156
           S  S    S      P P  RKI V     W  G+ Y +W  K+ PF+++D+LVFKY+  
Sbjct: 202 SNHSSITGSTHNHTAPIPAGRKIAV---TVWKNGYGYTEWTAKHAPFYVSDVLVFKYNND 261

Query: 157 NST--------TPAHSVYQLPNMRSFVNCDLGKAKMLANSTQGSTENGFEFQLKHQNPYY 216
           + T           + VY LP+M+SF  C++ + K L  +  GS+  GF+  L+    YY
Sbjct: 262 DQTQSKTKHRNKKKNDVYLLPDMKSFKRCNVARGKKLV-ARGGSSSRGFKLLLRKVQTYY 321

Query: 217 FACGEANGFHCQTGSMKFTLTPI 232
           FA G+ N   C   +MKF++ PI
Sbjct: 322 FASGDHN--EC-NHNMKFSVHPI 337

[Close]

BLAST of Carg23617 vs. TAIR 10
Match: AT4G34300.1 (Cupredoxin superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 4.4e-15
Identity = 49/130 (37.69%), Postives = 70/130 (53.85%), Query Frame = 0


Query: 113 TPPS--RKIIVGGSEHWHLGFDYNDWALKNGPFHINDILVFKY---DPPNSTTPAH---- 172
           T PS  RKI V     W  G+ Y +W  K+ PF++ND+LVF Y   D   S T  H    
Sbjct: 185 TAPSLGRKIAV---TVWKNGYGYTEWTAKHAPFYVNDVLVFTYNNNDQTQSKTKHHHDKK 244

Query: 173 --SVYQLPNMRSFVNCDLGKAKMLANSTQGSTENGFEFQLKHQNPYYFACGEANGFHCQT 232
              VY LP+M+SF  C++ + K L  +  GS+  GF+  L+  + YYF  G+ N  +   
Sbjct: 245 KNDVYLLPDMKSFKRCNVARGKKLV-ARGGSSSRGFKLLLRKVHTYYFVSGDHNDCN--- 304

The following BLAST results are available for this feature:

BLAST of Carg23617 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010963.1	8.1e-128	100.00	hypothetical protein SDJN02_27761, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022944052.1	1.2e-118	91.50	alpha carbonic anhydrase 8-like [Cucurbita moschata]	[more]
XP_038902031.1	6.8e-66	54.69	extensin-3-like [Benincasa hispida]	[more]
XP_011649199.1	6.3e-64	56.12	leucine-rich repeat extensin-like protein 3 [Cucumis sativus] >KGN61733.1 hypoth...	[more]
XP_022947109.1	2.4e-55	57.66	extensin-like isoform X4 [Cucurbita moschata]	[more]

BLAST of Carg23617 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg23617 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FUQ3	5.7e-119	91.50	alpha carbonic anhydrase 8-like OS=Cucurbita moschata OX=3662 GN=LOC111448602 PE...	[more]
A0A0A0LIT9	3.1e-64	56.12	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G234585...	[more]
A0A6J1G5T9	1.2e-55	57.66	extensin-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111451078 PE=4 SV=1	[more]
A0A6J1G5W9	1.2e-55	57.66	extensin-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451078 PE=4 SV=1	[more]
A0A6J1G5G3	1.2e-55	57.66	extensin-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451078 PE=4 SV=1	[more]

BLAST of Carg23617 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15780.1	7.3e-34	56.90	Cupredoxin superfamily protein	[more]
AT2G15770.1	1.7e-27	47.41	Cupredoxin superfamily protein	[more]
AT4G33930.1	3.4e-15	34.97	Cupredoxin superfamily protein	[more]
AT4G34300.1	4.4e-15	37.69	Cupredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 116..230 e-value: 2.9E-22 score: 80.9
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 117..229
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 131..222 e-value: 1.6E-6 score: 28.0
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 117..232 score: 25.213984
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..117
None	No IPR available	PANTHER	PTHR34052	GLYCINE-RICH PROTEIN-LIKE	coord: 4..233
None	No IPR available	PANTHER	PTHR34052:SF1	GLYCINE-RICH PROTEIN-LIKE	coord: 4..233

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23617-RA	Carg23617-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
molecular_function	GO:0009055	electron transfer activity