Carg23608 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23608
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	PLATZ transcription factor family protein
Location	Carg_Chr20: 4596685 .. 4598672 (+)
RNA-Seq Expression	Carg23608
Synteny	Carg23608

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAGAATTCGATCCAAATCGGAACACCTCCATTGCCGAATCGGTTACCTAATTCTTCTATCGATCGATTGATCGATCGCGCTCTTTTTCCTGAAATTTCTTCCGATTTTGCGTTGAATTAGGTCAAAATAGGAGAAATCGACCAGAAAGAGGAAGAACAAGAAGAAGAAGAGGAAGAAGATGAAGTTGAATGGCCGCCATGGCTGGAACCTCTGCTGAGCACGAGCTTCTTCGTTCAATGCAAGCTGCACGCGGATTCGCACAAAAGTGAATGCAATATGTATTGCTTGGATTGCGTGAACGGAGCTCTCTGTTCGCTCTGTCTTGATTCGCATCGAGATCACAGAGCCATTCAGGTATGCTCTGTTCTTTGAGATTCTTTCGCTTTCGTGTTGCGAAGAATTTCTTCAATTATTGAATTTTCTTTTTTTAATTTTGATTTTTTGGAAAATATTTAATTGAAGCCTACGTGGAAATTACTGTTTGTTACCTACTAACAGCAACAAGATGTCAAATCATAACTATATTAACTGTGAAAGTCTCTCTTTATCTTTATTTTATTATTTTATTATTTTCTCTTTCTTTCTCCAATCAAGAGGTTGTTGCTAAATTTTGAAAAGTTACTTCTCTGTTTCCAGGTAAAGGTAAAAAAGTAAAAAGTAAAAAATAATTTGTATCAATTAATATTTAAATCCGAGTCTTTTCCCTACCACATATTTCAATCTCTATTTCAAAATTTTAATTTATTTTCGTGAATGTTTTTTTTATATATATATATATTTTTAAAGAATATTTCTAATAAATAATTTTTATCTTTTAATATAATTTCAATATATATATATATATATATATATATATATATATATAAAAGTTTTGCTCTCGACTCAGTTTAGTTAATATATTGTTTTCTCCTCCATTTTTCCAACTTGGGAGAGTTTATCGGCTCGTGAATTAAATGAATGTTTTTAGTTAAAAATTATTGTGTTTTTGGGTAATGGAATACAGATAAGGAGATCGTCGTACCATGATGTGATAAGAGTATGCGAGATACAGAAATATGTGGACATAACAGGAGTCCAAACTTACATCATAAATAGTGCGAGGATCGTGTTCTTGAACGAGCGCCCTCAGACACGTCCTTCGAAAGCTCTCACTAACATCTGCCTTGTTTGCCACCGTTCCCTTCTTCATTCCTTCCATTTCTGCTCTCTTGGCTGCAAGGTTTTTCTTTCCACCTTTTTCTTATTCATTTCTATGCTCTTCTCTCCTTTTGAAAATGTTTTTCGAAAATCATTAAAAAAGAAAAAACCCCGAGTAAATATGTTCTTATTTTGTTTATATTTTGATTTGGAGACAGATATGATCTATGAACTTTTAGATAGATTATGAAGAATTGCTTTGCGCATAAATTGAAACGTGAAGGTGTTTTGAGTAATTTGATCTTAAGAGGATATTTGAAATTATGAGTCGAGTTATTAAATATGTAGCGGTTAATATCATGACTTGTAGATCGATATTTTCGTTTTTATGAATTTTTCATTTTCTTATAAATAATATCGAACGGTTGAAATAAATGTGAATTTATATTTTATAAATACAGCTAATTGGGACGTCGAGAAATTTTGAGAAAAAGGAGAAAGTGATGGAAAACGAAAGCTCGGACACCGCCACGAGCAACAGAAGAAGGCTTAGAAGCAAAATCCAAAGCTTCTCGCCGGCGACGCCACCACCCACGGCGGCGGCGACTCACAAAGCTGGCAAGAGAAGGAAGGGAACGCCACATCGATCCCCAATGGGAGGACTTCTCTTAGAATTTTAAATATTTATTATTAGTACGAAAAGACGAAAATACCCCTTACAACCACCACCGACGCATAAGCCCAAATTATTACTATTTTTTGCAGCATCTGAGCCTTTGGCCAACGGTTAACGGAGGCCGTTGCTGTAAATGTCACATCTCTGTTACATATATAGTGCATAAGAAA

mRNA sequence

ATGGTCAAAATAGGAGAAATCGACCAGAAAGAGGAAGAACAAGAAGAAGAAGAGGAAGAAGATGAAGTTGAATGGCCGCCATGGCTGGAACCTCTGCTGAGCACGAGCTTCTTCGTTCAATGCAAGCTGCACGCGGATTCGCACAAAAGTGAATGCAATATGTATTGCTTGGATTGCGTGAACGGAGCTCTCTGTTCGCTCTGTCTTGATTCGCATCGAGATCACAGAGCCATTCAGATAAGGAGATCGTCGTACCATGATGTGATAAGAGTATGCGAGATACAGAAATATGTGGACATAACAGGAGTCCAAACTTACATCATAAATAGTGCGAGGATCGTGTTCTTGAACGAGCGCCCTCAGACACGTCCTTCGAAAGCTCTCACTAACATCTGCCTTGTTTGCCACCGTTCCCTTCTTCATTCCTTCCATTTCTGCTCTCTTGGCTGCAAGCTAATTGGGACGTCGAGAAATTTTGAGAAAAAGGAGAAAGTGATGGAAAACGAAAGCTCGGACACCGCCACGAGCAACAGAAGAAGGCTTAGAAGCAAAATCCAAAGCTTCTCGCCGGCGACGCCACCACCCACGGCGGCGGCGACTCACAAAGCTGGCAAGAGAAGGAAGGGAACGCCACATCGATCCCCAATGGGAGGACTTCTCTTAGAATTTTAAATATTTATTATTAGTACGAAAAGACGAAAATACCCCTTACAACCACCACCGACGCATAAGCCCAAATTATTACTATTTTTTGCAGCATCTGAGCCTTTGGCCAACGGTTAACGGAGGCCGTTGCTGTAAATGTCACATCTCTGTTACATATATAGTGCATAAGAAA

Coding sequence (CDS)

ATGGTCAAAATAGGAGAAATCGACCAGAAAGAGGAAGAACAAGAAGAAGAAGAGGAAGAAGATGAAGTTGAATGGCCGCCATGGCTGGAACCTCTGCTGAGCACGAGCTTCTTCGTTCAATGCAAGCTGCACGCGGATTCGCACAAAAGTGAATGCAATATGTATTGCTTGGATTGCGTGAACGGAGCTCTCTGTTCGCTCTGTCTTGATTCGCATCGAGATCACAGAGCCATTCAGATAAGGAGATCGTCGTACCATGATGTGATAAGAGTATGCGAGATACAGAAATATGTGGACATAACAGGAGTCCAAACTTACATCATAAATAGTGCGAGGATCGTGTTCTTGAACGAGCGCCCTCAGACACGTCCTTCGAAAGCTCTCACTAACATCTGCCTTGTTTGCCACCGTTCCCTTCTTCATTCCTTCCATTTCTGCTCTCTTGGCTGCAAGCTAATTGGGACGTCGAGAAATTTTGAGAAAAAGGAGAAAGTGATGGAAAACGAAAGCTCGGACACCGCCACGAGCAACAGAAGAAGGCTTAGAAGCAAAATCCAAAGCTTCTCGCCGGCGACGCCACCACCCACGGCGGCGGCGACTCACAAAGCTGGCAAGAGAAGGAAGGGAACGCCACATCGATCCCCAATGGGAGGACTTCTCTTAGAATTTTAA

Protein sequence

MVKIGEIDQKEEEQEEEEEEDEVEWPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCVNGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERPQTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRRLRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF

Homology

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BLAST of Carg23608 vs. NCBI nr
Match: KAG7010972.1 (hypothetical protein SDJN02_27770, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 449.5 bits (1155), Expect = 1.7e-122
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MVKIGEIDQKEEEQEEEEEEDEVEWPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCV 60
           MVKIGEIDQKEEEQEEEEEEDEVEWPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCV
Sbjct: 1   MVKIGEIDQKEEEQEEEEEEDEVEWPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCV 60

Query: 61  NGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP 120
           NGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP
Sbjct: 61  NGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP 120

Query: 121 QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRR 180
           QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRR
Sbjct: 121 QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRR 180

Query: 181 LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF 224
           LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF
Sbjct: 181 LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF 223

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BLAST of Carg23608 vs. NCBI nr
Match: XP_022943399.1 (uncharacterized protein LOC111448175 [Cucurbita moschata])

HSP 1 Score: 446.0 bits (1146), Expect = 1.8e-121
Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 1   MVKIGEIDQKEEEQEEEEEEDEVEWPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCV 60
           MVKIGEIDQKEEEQEEEEEEDEVEWPPWLEPLLSTSFFVQCK HADSHKSECNMYCLDC+
Sbjct: 1   MVKIGEIDQKEEEQEEEEEEDEVEWPPWLEPLLSTSFFVQCKQHADSHKSECNMYCLDCM 60

Query: 61  NGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP 120
           NGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP
Sbjct: 61  NGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP 120

Query: 121 QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRR 180
           QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRR
Sbjct: 121 QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRR 180

Query: 181 LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF 224
           LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF
Sbjct: 181 LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF 223

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BLAST of Carg23608 vs. NCBI nr
Match: XP_022986606.1 (uncharacterized protein LOC111484296 [Cucurbita maxima])

HSP 1 Score: 441.0 bits (1133), Expect = 5.9e-120
Identity = 218/223 (97.76%), Postives = 221/223 (99.10%), Query Frame = 0


Query: 1   MVKIGEIDQKEEEQEEEEEEDEVEWPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCV 60
           M KIGEIDQKEEEQEEEEEEDEVEWPPWLEPLLSTSFFVQCK HADSHKSECNMYCLDC+
Sbjct: 1   MGKIGEIDQKEEEQEEEEEEDEVEWPPWLEPLLSTSFFVQCKQHADSHKSECNMYCLDCM 60

Query: 61  NGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP 120
           NGALCSLCLDSH+DHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP
Sbjct: 61  NGALCSLCLDSHQDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP 120

Query: 121 QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRR 180
           QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRR
Sbjct: 121 QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRR 180

Query: 181 LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF 224
           LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLL+EF
Sbjct: 181 LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLIEF 223

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BLAST of Carg23608 vs. NCBI nr
Match: XP_023512107.1 (uncharacterized protein LOC111776925 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 435.3 bits (1118), Expect = 3.3e-118
Identity = 217/223 (97.31%), Postives = 219/223 (98.21%), Query Frame = 0


Query: 1   MVKIGEIDQKEEEQEEEEEEDEVEWPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCV 60
           MVKIGEIDQKEEEQ  EEEEDE+EWPPWLEPLLSTSFFVQCK HADSHKSECNMYCLDC+
Sbjct: 1   MVKIGEIDQKEEEQ--EEEEDEIEWPPWLEPLLSTSFFVQCKQHADSHKSECNMYCLDCM 60

Query: 61  NGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP 120
           NGALCSLCLDSH DHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP
Sbjct: 61  NGALCSLCLDSHPDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP 120

Query: 121 QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRR 180
           QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRR
Sbjct: 121 QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRR 180

Query: 181 LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF 224
           LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF
Sbjct: 181 LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF 221

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BLAST of Carg23608 vs. NCBI nr
Match: XP_038902894.1 (uncharacterized protein LOC120089480 [Benincasa hispida])

HSP 1 Score: 380.9 bits (977), Expect = 7.3e-102
Identity = 194/230 (84.35%), Postives = 211/230 (91.74%), Query Frame = 0


Query: 1   MVKIGEIDQKEEEQEEE-EEEDEVEWPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDC 60
           M KIGEIDQ EEE+EEE E E E+EWPPWLEPLLSTSFFVQCK HADSHK+ECNMYCLDC
Sbjct: 1   MGKIGEIDQNEEEEEEEGEGESEIEWPPWLEPLLSTSFFVQCKHHADSHKTECNMYCLDC 60

Query: 61  VNGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNER 120
           +NGALCSLCL+SH+DHRAIQIRRSSYHDVIRVCEIQK++DITGVQTYIINSARIVFLN+R
Sbjct: 61  INGALCSLCLNSHKDHRAIQIRRSSYHDVIRVCEIQKFMDITGVQTYIINSARIVFLNQR 120

Query: 121 PQTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKE-KVMENESSD-----T 180
           PQ RP+KALTNICLVCHRSLL S+HFCSLGCKLIGTS+NF K+  KV+ENESSD     T
Sbjct: 121 PQPRPAKALTNICLVCHRSLLDSYHFCSLGCKLIGTSKNFGKRVIKVVENESSDTEKSKT 180

Query: 181 ATSNRRRLRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF 224
           ATSNRR+LRSKIQSFSP+TPPPT AATH+  KRRKGTPHRSPMGGLLLEF
Sbjct: 181 ATSNRRKLRSKIQSFSPSTPPPT-AATHRTAKRRKGTPHRSPMGGLLLEF 229

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BLAST of Carg23608 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 5.9e-30
Identity = 61/130 (46.92%), Postives = 84/130 (64.62%), Query Frame = 0


Query: 23  VEWPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCVNGALCSLCLDSHRDHRAIQIRR 82
           ++ P WL+ L +  FFV C  H  + K+E N+ CLDC   +LC  C+ SHR HR +Q+RR
Sbjct: 3   IQKPAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCT-SLCPHCVPSHRFHRLLQVRR 62

Query: 83  SSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERPQTRPSKALTNICLVCHRSLLHS 142
             YHDV+R+ ++QK +D + VQ Y INSA++VF+ +RPQ R  K   N C  C RSL   
Sbjct: 63  YVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGAGNYCTSCDRSLQEP 122

Query: 143 FHFCSLGCKL 153
           +  CSLGCK+
Sbjct: 123 YIHCSLGCKV 131

[Close]

BLAST of Carg23608 vs. ExPASy Swiss-Prot
Match: P0CB19 (Uncharacterized protein At3g50808 OS=Arabidopsis thaliana OX=3702 GN=At3g50808 PE=4 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 7.3e-04
Identity = 36/127 (28.35%), Postives = 59/127 (46.46%), Query Frame = 0


Query: 94  IQKYVDITGVQTYIINSARIVFLNERPQTRPSKALTNI---CLVCHRSL--LHSFHFCSL 153
           + +Y+DI+G+  Y IN   IV++N+R      ++ +N+   C +C   +    S  FCS+
Sbjct: 1   MSQYMDISGIHLYSINGFPIVYINQRRGNNNHRSRSNVMHKCKICEWEIDAASSALFCSM 60

Query: 154 GCKLIGTSRNFEKKEKVMENESSDTATSNRRRLRSKIQSFSPATPPPTAAATHKAGKRRK 213
            CK    S    + +++MEN              S++   S     P     H    RRK
Sbjct: 61  ECKF--RSVLGSQLDELMENS-------------SEVTEISEEIDEPVMKKRH----RRK 108

Query: 214 GTPHRSP 216
           G+PHR+P
Sbjct: 121 GSPHRAP 108

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BLAST of Carg23608 vs. ExPASy TrEMBL
Match: A0A6J1FU72 (uncharacterized protein LOC111448175 OS=Cucurbita moschata OX=3662 GN=LOC111448175 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 8.9e-122
Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 1   MVKIGEIDQKEEEQEEEEEEDEVEWPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCV 60
           MVKIGEIDQKEEEQEEEEEEDEVEWPPWLEPLLSTSFFVQCK HADSHKSECNMYCLDC+
Sbjct: 1   MVKIGEIDQKEEEQEEEEEEDEVEWPPWLEPLLSTSFFVQCKQHADSHKSECNMYCLDCM 60

Query: 61  NGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP 120
           NGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP
Sbjct: 61  NGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP 120

Query: 121 QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRR 180
           QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRR
Sbjct: 121 QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRR 180

Query: 181 LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF 224
           LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF
Sbjct: 181 LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF 223

[Close]

BLAST of Carg23608 vs. ExPASy TrEMBL
Match: A0A6J1JBN2 (uncharacterized protein LOC111484296 OS=Cucurbita maxima OX=3661 GN=LOC111484296 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 2.9e-120
Identity = 218/223 (97.76%), Postives = 221/223 (99.10%), Query Frame = 0


Query: 1   MVKIGEIDQKEEEQEEEEEEDEVEWPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCV 60
           M KIGEIDQKEEEQEEEEEEDEVEWPPWLEPLLSTSFFVQCK HADSHKSECNMYCLDC+
Sbjct: 1   MGKIGEIDQKEEEQEEEEEEDEVEWPPWLEPLLSTSFFVQCKQHADSHKSECNMYCLDCM 60

Query: 61  NGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP 120
           NGALCSLCLDSH+DHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP
Sbjct: 61  NGALCSLCLDSHQDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP 120

Query: 121 QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRR 180
           QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRR
Sbjct: 121 QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDTATSNRRR 180

Query: 181 LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF 224
           LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLL+EF
Sbjct: 181 LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLIEF 223

[Close]

BLAST of Carg23608 vs. ExPASy TrEMBL
Match: A0A1S3C9J0 (uncharacterized protein LOC103498364 OS=Cucumis melo OX=3656 GN=LOC103498364 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.8e-98
Identity = 192/230 (83.48%), Postives = 207/230 (90.00%), Query Frame = 0


Query: 1   MVKIGEIDQKEEEQEEEEEEDEVEWPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCV 60
           M KIGEID+ EE  EE E E E+EWPPWLEPLLST+FFVQCK HADSHKSECNMYCLDC+
Sbjct: 1   MEKIGEIDKNEE--EEGEGEGEIEWPPWLEPLLSTNFFVQCKNHADSHKSECNMYCLDCM 60

Query: 61  NGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP 120
           NGA+CSLCL+SH+DHRAIQIRRSSYHDVIRVCEIQK+VDITGVQTYIINSARIVFLNERP
Sbjct: 61  NGAICSLCLNSHKDHRAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNERP 120

Query: 121 QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKK-EKVMENESSD-----TA 180
           Q RPSKALTNICLVCHRSLL SFHFCSLGCKLIGTS+N+ KK  KV+ENESSD     T+
Sbjct: 121 QPRPSKALTNICLVCHRSLLDSFHFCSLGCKLIGTSKNYGKKIIKVVENESSDTEKSKTS 180

Query: 181 TSNRRR-LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF 224
           +SNR R LRSKIQSFSP+TPPPT AATH+  KRRKGTPHRSPMGGLLLEF
Sbjct: 181 SSNRGRILRSKIQSFSPSTPPPT-AATHRTAKRRKGTPHRSPMGGLLLEF 227

[Close]

BLAST of Carg23608 vs. ExPASy TrEMBL
Match: A0A0A0LR17 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G445270 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 5.3e-98
Identity = 194/230 (84.35%), Postives = 205/230 (89.13%), Query Frame = 0


Query: 1   MVKIGEIDQKEEEQEEEEEEDEVEWPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCV 60
           M KIGEID+ EE  EE E E E+EWPPWLEPLLSTSFFVQCK HADSHKSECNMYCLDC+
Sbjct: 1   MEKIGEIDKNEE--EEGEGEGEIEWPPWLEPLLSTSFFVQCKNHADSHKSECNMYCLDCM 60

Query: 61  NGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERP 120
           NGALCSLCL+SH+DHRAIQIRRSSYHDVIRVCEIQK+VDITGVQTYIINSARIVFLNERP
Sbjct: 61  NGALCSLCLNSHKDHRAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNERP 120

Query: 121 QTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKK-EKVMENESSD-----TA 180
           Q RPSKALTNICLVCHRSLL SFHFCSLGCKLIGTS+N  KK  KV+ENESSD     T+
Sbjct: 121 QPRPSKALTNICLVCHRSLLDSFHFCSLGCKLIGTSKNNGKKIIKVVENESSDTEKSKTS 180

Query: 181 TSNRRR-LRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF 224
            SNR R LRSKIQSFSP+TPPPT AATH+  KRRKGTPHRSPMGGLLLEF
Sbjct: 181 GSNRGRILRSKIQSFSPSTPPPT-AATHRTAKRRKGTPHRSPMGGLLLEF 227

[Close]

BLAST of Carg23608 vs. ExPASy TrEMBL
Match: A0A6J1L7W8 (uncharacterized protein LOC111499992 OS=Cucurbita maxima OX=3661 GN=LOC111499992 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.3e-93
Identity = 180/231 (77.92%), Postives = 200/231 (86.58%), Query Frame = 0


Query: 1   MVKIGEIDQKEEEQEEEEEED---EVEWPPWLEPLLSTSFFVQCKLHADSHKSECNMYCL 60
           M +IGE  + EE+ EEEEEE+   E+EWPPWLEPLLSTSFFVQC  HADSHKSECNMYCL
Sbjct: 1   MERIGEDGENEEKGEEEEEEEGIGEIEWPPWLEPLLSTSFFVQCNHHADSHKSECNMYCL 60

Query: 61  DCVNGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLN 120
           DC+NGALCSLCL+SH+DHRAIQIRRSSYHDVIRV EIQ++VDITGVQTYIINSARIVFLN
Sbjct: 61  DCMNGALCSLCLNSHKDHRAIQIRRSSYHDVIRVSEIQRFVDITGVQTYIINSARIVFLN 120

Query: 121 ERPQTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSD----- 180
           ERPQ RP+KALTN C VC R+LL SFHFCSLGCKLIGTS++ +K+ + +ENESSD     
Sbjct: 121 ERPQPRPAKALTNTCHVCRRALLDSFHFCSLGCKLIGTSKSLDKRVQAVENESSDTEKSK 180

Query: 181 TATSNRRRLRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF 224
           T  SNRRRL SKIQSFSP+TPPPT AA H+  KRRKGTPHRSPMGGLLLEF
Sbjct: 181 TTKSNRRRLGSKIQSFSPSTPPPT-AAIHRTAKRRKGTPHRSPMGGLLLEF 230

[Close]

BLAST of Carg23608 vs. TAIR 10
Match: AT4G17900.1 (PLATZ transcription factor family protein )

HSP 1 Score: 269.6 bits (688), Expect = 2.2e-72
Identity = 132/202 (65.35%), Postives = 157/202 (77.72%), Query Frame = 0


Query: 19  EEDEVEWPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCVNGALCSLCLDSHRDHRAI 78
           EE+E  WPPWL+PLL   FFV CK H DSHKSECNMYCLDC NG LCSLCL  H+DHR I
Sbjct: 27  EEEENRWPPWLKPLLKEQFFVHCKFHGDSHKSECNMYCLDCTNGPLCSLCLAHHKDHRTI 86

Query: 79  QIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERPQTRPSKALTNICLVCHRS 138
           QIRRSSYHDVIRV EIQKY+DI G+QTY+INSA++VFLNERPQ RP K +TN C VC+RS
Sbjct: 87  QIRRSSYHDVIRVNEIQKYLDIGGIQTYVINSAKVVFLNERPQPRPGKGVTNTCKVCYRS 146

Query: 139 LL-HSFHFCSLGCKLIGTSRNFEK--KEKVMENESSDTATSNRRRLRSKIQSFSPATPPP 198
           L+  SF FCSLGCK+ GTSR FEK  +  +ME E S ++ +  + + + +QSFSP+TPP 
Sbjct: 147 LVDDSFRFCSLGCKIAGTSRGFEKGRENLLMETEDSSSSIAIGKNI-TNLQSFSPSTPPL 206

Query: 199 TAAATHKAGKRRKGTPHRSPMG 218
           T ++  +  KRRKG PHRSPMG
Sbjct: 207 TTSSNCRIVKRRKGIPHRSPMG 227

[Close]

BLAST of Carg23608 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein )

HSP 1 Score: 257.7 bits (657), Expect = 8.7e-69
Identity = 131/214 (61.21%), Postives = 158/214 (73.83%), Query Frame = 0


Query: 18  EEEDEVEWPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCVNGALCSLCLDSHRDHRA 77
           EEE    +P WL+PLL   FFVQCKLHADSHKSECNMYCLDC NG LCSLCL  H+DH A
Sbjct: 4   EEETNKTYPHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDHHA 63

Query: 78  IQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERPQTRPSKALTNICLVCHR 137
           IQIRRSSYHDVIRV EIQK++DITGVQTY+INSA++VFLNERPQ RP K + N C VC+R
Sbjct: 64  IQIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVINTCEVCYR 123

Query: 138 SLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDT----ATSNRRRLRSK----IQSFS 197
           SL+ SF FCSLGCK+ G S+   KK K   N  SD+    ++++  RL+        SF+
Sbjct: 124 SLVDSFRFCSLGCKISGISK---KKRKEWTNNLSDSDDSYSSTSIGRLKKNDDIMNNSFT 183

Query: 198 PATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF 224
           P+T PP +A   +  KRRKG PHR+P GGL++E+
Sbjct: 184 PST-PPLSAVNRRIAKRRKGIPHRAPFGGLIIEY 213

[Close]

BLAST of Carg23608 vs. TAIR 10
Match: AT4G17900.2 (PLATZ transcription factor family protein )

HSP 1 Score: 211.5 bits (537), Expect = 7.1e-55
Identity = 107/167 (64.07%), Postives = 130/167 (77.84%), Query Frame = 0


Query: 54  MYCLDCVNGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARI 113
           MYCLDC NG LCSLCL  H+DHR IQIRRSSYHDVIRV EIQKY+DI G+QTY+INSA++
Sbjct: 1   MYCLDCTNGPLCSLCLAHHKDHRTIQIRRSSYHDVIRVNEIQKYLDIGGIQTYVINSAKV 60

Query: 114 VFLNERPQTRPSKALTNICLVCHRSLL-HSFHFCSLGCKLIGTSRNFEK--KEKVMENES 173
           VFLNERPQ RP K +TN C VC+RSL+  SF FCSLGCK+ GTSR FEK  +  +ME E 
Sbjct: 61  VFLNERPQPRPGKGVTNTCKVCYRSLVDDSFRFCSLGCKIAGTSRGFEKGRENLLMETED 120

Query: 174 SDTATSNRRRLRSKIQSFSPATPPPTAAATHKAGKRRKGTPHRSPMG 218
           S ++ +  + + + +QSFSP+TPP T ++  +  KRRKG PHRSPMG
Sbjct: 121 SSSSIAIGKNI-TNLQSFSPSTPPLTTSSNCRIVKRRKGIPHRSPMG 166

[Close]

BLAST of Carg23608 vs. TAIR 10
Match: AT5G46710.1 (PLATZ transcription factor family protein )

HSP 1 Score: 205.7 bits (522), Expect = 3.9e-53
Identity = 102/205 (49.76%), Postives = 135/205 (65.85%), Query Frame = 0


Query: 20  EDEVEWPPWLEPLLSTSFFVQCKLHADSHKSECNMYCLDCVNGALCSLCLDSHRDHRAIQ 79
           E E +WP WL+PLL+  FF QCK H    ++EC MYCLDC N + CSLCL  H +HR IQ
Sbjct: 22  EGENQWPIWLKPLLNQHFFAQCKFHGHLPRTECKMYCLDCTNDSFCSLCLSEHENHRTIQ 81

Query: 80  IRRSSYHDVIRVCEIQKYVDITGVQTYIINSARIVFLNERPQTRPSKALTNICLVCHRSL 139
           IR SSYH+V +V EIQKY+DI+ +QTY+INS++++FLNERPQ++P K  TN C+VC+R L
Sbjct: 82  IRISSYHNVTKVDEIQKYLDISSIQTYVINSSKVLFLNERPQSKPGKGFTNACMVCYRGL 141

Query: 140 LHS-FHFCSLGCKLIGTSRNFEKKEKVMENESS--------DTATSNRRRLRSKIQSFSP 199
             + F FCS+GCK+ GTS  F+K+ K   N+S         +  +S      S +QS SP
Sbjct: 142 AENCFRFCSIGCKVAGTSGVFQKRVKHTTNDSDNSNNSSGVENNSSGAENGNSNLQSLSP 201

Query: 200 ATPPPTAAATHKAGKRRKGTPHRSP 216
            TP     +  K  + RKG PHR+P
Sbjct: 202 PTPQFPPRSLRK--RLRKGIPHRAP 224

[Close]

BLAST of Carg23608 vs. TAIR 10
Match: AT1G32700.2 (PLATZ transcription factor family protein )

HSP 1 Score: 203.8 bits (517), Expect = 1.5e-52
Identity = 105/178 (58.99%), Postives = 130/178 (73.03%), Query Frame = 0


Query: 54  MYCLDCVNGALCSLCLDSHRDHRAIQIRRSSYHDVIRVCEIQKYVDITGVQTYIINSARI 113
           MYCLDC NG LCSLCL  H+DH AIQIRRSSYHDVIRV EIQK++DITGVQTY+INSA++
Sbjct: 1   MYCLDCTNGPLCSLCLSFHKDHHAIQIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKV 60

Query: 114 VFLNERPQTRPSKALTNICLVCHRSLLHSFHFCSLGCKLIGTSRNFEKKEKVMENESSDT 173
           VFLNERPQ RP K + N C VC+RSL+ SF FCSLGCK+ G S+   KK K   N  SD+
Sbjct: 61  VFLNERPQPRPGKGVINTCEVCYRSLVDSFRFCSLGCKISGISK---KKRKEWTNNLSDS 120

Query: 174 ----ATSNRRRLRSK----IQSFSPATPPPTAAATHKAGKRRKGTPHRSPMGGLLLEF 224
               ++++  RL+        SF+P+T PP +A   +  KRRKG PHR+P GGL++E+
Sbjct: 121 DDSYSSTSIGRLKKNDDIMNNSFTPST-PPLSAVNRRIAKRRKGIPHRAPFGGLIIEY 174

The following BLAST results are available for this feature:

BLAST of Carg23608 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010972.1	1.7e-122	100.00	hypothetical protein SDJN02_27770, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022943399.1	1.8e-121	99.10	uncharacterized protein LOC111448175 [Cucurbita moschata]	[more]
XP_022986606.1	5.9e-120	97.76	uncharacterized protein LOC111484296 [Cucurbita maxima]	[more]
XP_023512107.1	3.3e-118	97.31	uncharacterized protein LOC111776925 [Cucurbita pepo subsp. pepo]	[more]
XP_038902894.1	7.3e-102	84.35	uncharacterized protein LOC120089480 [Benincasa hispida]	[more]

BLAST of Carg23608 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3Q4	5.9e-30	46.92	Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
P0CB19	7.3e-04	28.35	Uncharacterized protein At3g50808 OS=Arabidopsis thaliana OX=3702 GN=At3g50808 P...	[more]

BLAST of Carg23608 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FU72	8.9e-122	99.10	uncharacterized protein LOC111448175 OS=Cucurbita moschata OX=3662 GN=LOC1114481...	[more]
A0A6J1JBN2	2.9e-120	97.76	uncharacterized protein LOC111484296 OS=Cucurbita maxima OX=3661 GN=LOC111484296...	[more]
A0A1S3C9J0	1.8e-98	83.48	uncharacterized protein LOC103498364 OS=Cucumis melo OX=3656 GN=LOC103498364 PE=...	[more]
A0A0A0LR17	5.3e-98	84.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G445270 PE=4 SV=1	[more]
A0A6J1L7W8	1.3e-93	77.92	uncharacterized protein LOC111499992 OS=Cucurbita maxima OX=3661 GN=LOC111499992...	[more]

BLAST of Carg23608 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17900.1	2.2e-72	65.35	PLATZ transcription factor family protein	[more]
AT1G32700.1	8.7e-69	61.21	PLATZ transcription factor family protein	[more]
AT4G17900.2	7.1e-55	64.07	PLATZ transcription factor family protein	[more]
AT5G46710.1	3.9e-53	49.76	PLATZ transcription factor family protein	[more]
AT1G32700.2	1.5e-52	58.99	PLATZ transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	PLATZ transcription factor	PFAM	PF04640	PLATZ	coord: 81..152 e-value: 1.5E-27 score: 96.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..179
None	No IPR available	PANTHER	PTHR31065	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 12..218
None	No IPR available	PANTHER	PTHR31065:SF57	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 12..218

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23608-RA	Carg23608-RA	mRNA