Carg23535 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23535
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Transmembrane protein
Location	Carg_Chr06: 3567291 .. 3567869 (-)
RNA-Seq Expression	Carg23535
Synteny	Carg23535

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTTCTCCATAAGTGGCCACCCACAATCATCAACCTCAATGAGCCGTTCCCATTACCACACCCACAAGCTCTTCCTCTACACCAATTACATCCTCCTCGGCGCCGCCTCCAGCTGCATTTTCCTCACTCTTTCCCTCCGCCTCCTCCCCTCTCTCTGCGGCCTCTCCCTCATCTTCCTCCACATCCTCACCATCGCCGCCGCCGTCTCCGGCTGCGCCATGGCCTCCACCGCCTCAGGCCGTTGGTTCGGCATCCACATGGTGTTCACCGTCCTCACCGCCATCTTCCAAGGCTCTGTTGCTGTCCTGGTGTACACCAGAACAGGGGACTTTCTGGGGGAGTTGAAATCGTACGTGAGGGAGGAGGATGGAGCCGTGATCTTGAAATTGGCCGGAGGGTTGAGTGTAACCATGTTTGTTTTGGAGTGGGTTGTTCTTACTTTGGCGTTTTTCTTGAAGTATTATGCGTTTGTTGAAGGCGGTGGTGGGAGTGGGAATGGGGCGGCGGCGATGAGGAGCGCTAAGGTTGAACAGGATGAGGATTTGAAGGACTGGCCTTGGCCGTTTCAAGTTTGA

mRNA sequence

ATGGGTTTCTCCATAAGTGGCCACCCACAATCATCAACCTCAATGAGCCGTTCCCATTACCACACCCACAAGCTCTTCCTCTACACCAATTACATCCTCCTCGGCGCCGCCTCCAGCTGCATTTTCCTCACTCTTTCCCTCCGCCTCCTCCCCTCTCTCTGCGGCCTCTCCCTCATCTTCCTCCACATCCTCACCATCGCCGCCGCCGTCTCCGGCTGCGCCATGGCCTCCACCGCCTCAGGCCGTTGGTTCGGCATCCACATGGTGTTCACCGTCCTCACCGCCATCTTCCAAGGCTCTGTTGCTGTCCTGGTGTACACCAGAACAGGGGACTTTCTGGGGGAGTTGAAATCGTACGTGAGGGAGGAGGATGGAGCCGTGATCTTGAAATTGGCCGGAGGGTTGAGTGTAACCATGTTTGTTTTGGAGTGGGTTGTTCTTACTTTGGCGTTTTTCTTGAAGTATTATGCGTTTGTTGAAGGCGGTGGTGGGAGTGGGAATGGGGCGGCGGCGATGAGGAGCGCTAAGGTTGAACAGGATGAGGATTTGAAGGACTGGCCTTGGCCGTTTCAAGTTTGA

Coding sequence (CDS)

ATGGGTTTCTCCATAAGTGGCCACCCACAATCATCAACCTCAATGAGCCGTTCCCATTACCACACCCACAAGCTCTTCCTCTACACCAATTACATCCTCCTCGGCGCCGCCTCCAGCTGCATTTTCCTCACTCTTTCCCTCCGCCTCCTCCCCTCTCTCTGCGGCCTCTCCCTCATCTTCCTCCACATCCTCACCATCGCCGCCGCCGTCTCCGGCTGCGCCATGGCCTCCACCGCCTCAGGCCGTTGGTTCGGCATCCACATGGTGTTCACCGTCCTCACCGCCATCTTCCAAGGCTCTGTTGCTGTCCTGGTGTACACCAGAACAGGGGACTTTCTGGGGGAGTTGAAATCGTACGTGAGGGAGGAGGATGGAGCCGTGATCTTGAAATTGGCCGGAGGGTTGAGTGTAACCATGTTTGTTTTGGAGTGGGTTGTTCTTACTTTGGCGTTTTTCTTGAAGTATTATGCGTTTGTTGAAGGCGGTGGTGGGAGTGGGAATGGGGCGGCGGCGATGAGGAGCGCTAAGGTTGAACAGGATGAGGATTTGAAGGACTGGCCTTGGCCGTTTCAAGTTTGA

Protein sequence

MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYVREEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPWPFQV

Homology

[Close]

BLAST of Carg23535 vs. NCBI nr
Match: XP_022958196.1 (uncharacterized protein LOC111459467 [Cucurbita moschata] >KAG7028304.1 hypothetical protein SDJN02_09485, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 371.7 bits (953), Expect = 3.8e-99
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60
           MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF
Sbjct: 1   MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60

Query: 61  LHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV 120
           LHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV
Sbjct: 61  LHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV 120

Query: 121 REEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQD 180
           REEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQD
Sbjct: 121 REEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQD 180

Query: 181 EDLKDWPWPFQV 193
           EDLKDWPWPFQV
Sbjct: 181 EDLKDWPWPFQV 192

[Close]

BLAST of Carg23535 vs. NCBI nr
Match: KAG6596776.1 (hypothetical protein SDJN03_09956, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 369.8 bits (948), Expect = 1.4e-98
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60
           MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF
Sbjct: 1   MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60

Query: 61  LHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV 120
           LHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV
Sbjct: 61  LHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV 120

Query: 121 REEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQD 180
           REEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQD
Sbjct: 121 REEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQD 180

Query: 181 EDLKDWPWPFQ 192
           EDLKDWPWPFQ
Sbjct: 181 EDLKDWPWPFQ 191

[Close]

BLAST of Carg23535 vs. NCBI nr
Match: XP_023540529.1 (uncharacterized protein LOC111800866 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 369.8 bits (948), Expect = 1.4e-98
Identity = 191/192 (99.48%), Postives = 191/192 (99.48%), Query Frame = 0


Query: 1   MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60
           MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF
Sbjct: 1   MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60

Query: 61  LHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV 120
           LHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV
Sbjct: 61  LHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV 120

Query: 121 REEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQD 180
           REEDGAVILKLAGGLSV MFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQD
Sbjct: 121 REEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQD 180

Query: 181 EDLKDWPWPFQV 193
           EDLKDWPWPFQV
Sbjct: 181 EDLKDWPWPFQV 192

[Close]

BLAST of Carg23535 vs. NCBI nr
Match: XP_023005568.1 (uncharacterized protein LOC111498512 [Cucurbita maxima])

HSP 1 Score: 367.9 bits (943), Expect = 5.5e-98
Identity = 190/192 (98.96%), Postives = 190/192 (98.96%), Query Frame = 0


Query: 1   MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60
           MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF
Sbjct: 1   MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60

Query: 61  LHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV 120
           LHILTIAAAVSGCAMASTASGRWFG HMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV
Sbjct: 61  LHILTIAAAVSGCAMASTASGRWFGTHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV 120

Query: 121 REEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQD 180
           REEDGAVILKLAGGLSV MFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQD
Sbjct: 121 REEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQD 180

Query: 181 EDLKDWPWPFQV 193
           EDLKDWPWPFQV
Sbjct: 181 EDLKDWPWPFQV 192

[Close]

BLAST of Carg23535 vs. NCBI nr
Match: XP_038904159.1 (uncharacterized protein LOC120090516 [Benincasa hispida])

HSP 1 Score: 324.7 bits (831), Expect = 5.3e-85
Identity = 169/192 (88.02%), Postives = 178/192 (92.71%), Query Frame = 0


Query: 1   MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60
           MGFSI+ +P  STSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF
Sbjct: 1   MGFSITANP--STSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60

Query: 61  LHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV 120
           LHILTIAAAVSGCAMA+ AS RWFG+HMVFTVLTAIFQGSVA+LV+TRTGDFL ELKSYV
Sbjct: 61  LHILTIAAAVSGCAMAAAASARWFGVHMVFTVLTAIFQGSVAMLVFTRTGDFLWELKSYV 120

Query: 121 REEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQD 180
           REEDGAVILKLAGGLSV MFVLEWVVLTLAFFLKYYAFVEG G + +    MRSAKV+QD
Sbjct: 121 REEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNSSNGVGMRSAKVQQD 180

Query: 181 EDLKDWPWPFQV 193
           EDLKDWPWPFQV
Sbjct: 181 EDLKDWPWPFQV 190

[Close]

BLAST of Carg23535 vs. ExPASy TrEMBL
Match: A0A6J1H1G8 (uncharacterized protein LOC111459467 OS=Cucurbita moschata OX=3662 GN=LOC111459467 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.8e-99
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60
           MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF
Sbjct: 1   MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60

Query: 61  LHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV 120
           LHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV
Sbjct: 61  LHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV 120

Query: 121 REEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQD 180
           REEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQD
Sbjct: 121 REEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQD 180

Query: 181 EDLKDWPWPFQV 193
           EDLKDWPWPFQV
Sbjct: 181 EDLKDWPWPFQV 192

[Close]

BLAST of Carg23535 vs. ExPASy TrEMBL
Match: A0A6J1L2J4 (uncharacterized protein LOC111498512 OS=Cucurbita maxima OX=3661 GN=LOC111498512 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 2.7e-98
Identity = 190/192 (98.96%), Postives = 190/192 (98.96%), Query Frame = 0


Query: 1   MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60
           MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF
Sbjct: 1   MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60

Query: 61  LHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV 120
           LHILTIAAAVSGCAMASTASGRWFG HMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV
Sbjct: 61  LHILTIAAAVSGCAMASTASGRWFGTHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV 120

Query: 121 REEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQD 180
           REEDGAVILKLAGGLSV MFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQD
Sbjct: 121 REEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQD 180

Query: 181 EDLKDWPWPFQV 193
           EDLKDWPWPFQV
Sbjct: 181 EDLKDWPWPFQV 192

[Close]

BLAST of Carg23535 vs. ExPASy TrEMBL
Match: A0A5D3D734 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00100 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 7.5e-85
Identity = 171/192 (89.06%), Postives = 180/192 (93.75%), Query Frame = 0


Query: 1   MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60
           MGFSI+  P  STSM+RSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF
Sbjct: 1   MGFSITSTP--STSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60

Query: 61  LHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV 120
           LHILTIAAAVSGCAMA+ +S RWFG+HMVFTVLTAIFQGSVA+LVYTRTGDFL ELKSYV
Sbjct: 61  LHILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLLELKSYV 120

Query: 121 REEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQD 180
           REEDGAVILKLAGGLSV MFVLEWVVLTLAFFL+YYAFVEG G + NG AAMRSAKV+QD
Sbjct: 121 REEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEGDGSNNNG-AAMRSAKVQQD 180

Query: 181 EDLKDWPWPFQV 193
           EDLKDWPWPFQV
Sbjct: 181 EDLKDWPWPFQV 189

[Close]

BLAST of Carg23535 vs. ExPASy TrEMBL
Match: A0A1S3BL21 (uncharacterized protein LOC103491004 OS=Cucumis melo OX=3656 GN=LOC103491004 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 7.5e-85
Identity = 171/192 (89.06%), Postives = 180/192 (93.75%), Query Frame = 0


Query: 1   MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60
           MGFSI+  P  STSM+RSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF
Sbjct: 1   MGFSITSTP--STSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60

Query: 61  LHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV 120
           LHILTIAAAVSGCAMA+ +S RWFG+HMVFTVLTAIFQGSVA+LVYTRTGDFL ELKSYV
Sbjct: 61  LHILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLLELKSYV 120

Query: 121 REEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQD 180
           REEDGAVILKLAGGLSV MFVLEWVVLTLAFFL+YYAFVEG G + NG AAMRSAKV+QD
Sbjct: 121 REEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVEGDGSNNNG-AAMRSAKVQQD 180

Query: 181 EDLKDWPWPFQV 193
           EDLKDWPWPFQV
Sbjct: 181 EDLKDWPWPFQV 189

[Close]

BLAST of Carg23535 vs. ExPASy TrEMBL
Match: A0A0A0L253 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G045140 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.7e-84
Identity = 170/192 (88.54%), Postives = 178/192 (92.71%), Query Frame = 0


Query: 1   MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60
           MGFSI+  P  STSM+RSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF
Sbjct: 1   MGFSITSTP--STSMTRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60

Query: 61  LHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV 120
           LHILTIAAAVSGCAMA+ +S RWFG+HMVFTVLTAIFQGSVA+LVYTRTGDFL ELKSYV
Sbjct: 61  LHILTIAAAVSGCAMAAASSTRWFGVHMVFTVLTAIFQGSVAMLVYTRTGDFLSELKSYV 120

Query: 121 REEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQD 180
           REEDGAVILKLAGGLSV MFVLEWVVLTLAFFL+YYAFVE   GS N  AAMRSAKV+QD
Sbjct: 121 REEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLRYYAFVE--EGSNNNGAAMRSAKVQQD 180

Query: 181 EDLKDWPWPFQV 193
           EDLKDWPWPFQV
Sbjct: 181 EDLKDWPWPFQV 188

[Close]

BLAST of Carg23535 vs. TAIR 10
Match: AT5G16250.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 244.2 bits (622), Expect = 8.5e-65
Identity = 124/186 (66.67%), Postives = 146/186 (78.49%), Query Frame = 0


Query: 7   GHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTI 66
           G   SS+ +  SHYHTHK+FL++NYILLGAASSCIFLTLSLRL+PS+CG  LI LH  TI
Sbjct: 2   GFISSSSPVEESHYHTHKIFLFSNYILLGAASSCIFLTLSLRLIPSICGFLLILLHATTI 61

Query: 67  AAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYVREEDGA 126
           AAAVSGCA AS    RW+  HMV TVLTAIFQGSV+VL++T T  FLG LKSYVREED A
Sbjct: 62  AAAVSGCAAASCGRNRWYAAHMVATVLTAIFQGSVSVLIFTNTSKFLGSLKSYVREEDAA 121

Query: 127 VILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDW 186
           VILKL GGL + +F L+W+VL  AFFLKYYA+V+G    G+G A  R+ KV+ +E+ KDW
Sbjct: 122 VILKLGGGLCIVIFCLDWIVLVCAFFLKYYAYVDG----GDGVAMKRTGKVQSEENPKDW 181

Query: 187 PWPFQV 193
           PWPFQV
Sbjct: 182 PWPFQV 183

[Close]

BLAST of Carg23535 vs. TAIR 10
Match: AT3G02640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16250.1); Has 96 Blast hits to 96 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 228.0 bits (580), Expect = 6.3e-60
Identity = 118/184 (64.13%), Postives = 141/184 (76.63%), Query Frame = 0


Query: 9   PQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAA 68
           PQ   S+  SHY+THKLFL  NY+LLGA+SSCIFLTLSLRL+PSLCG  LI LH  TIAA
Sbjct: 5   PQPQESIQESHYYTHKLFLTANYVLLGASSSCIFLTLSLRLIPSLCGFFLILLHATTIAA 64

Query: 69  AVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYVREEDGAVI 128
           AVSGCA AS    RW+  HM+ TVLTAIFQGSV+VL++T T +FL  L SYVRE++ ++I
Sbjct: 65  AVSGCAAASYGKNRWYAAHMIATVLTAIFQGSVSVLIFTNTSNFLESLNSYVREKEASMI 124

Query: 129 LKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWPW 188
           LKLAGGL V +F LEW+VL LAFFLKYYA+V+   G  NG A  R+ KV+ +E LK+ PW
Sbjct: 125 LKLAGGLCVVIFCLEWIVLVLAFFLKYYAYVD---GDNNGVAMKRTGKVQSEETLKNSPW 184

Query: 189 PFQV 193
            FQV
Sbjct: 185 AFQV 185

[Close]

BLAST of Carg23535 vs. TAIR 10
Match: AT5G36800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 198.4 bits (503), Expect = 5.4e-51
Identity = 115/184 (62.50%), Postives = 139/184 (75.54%), Query Frame = 0


Query: 15  MSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCA 74
           MS+S  +TH +FL  NYILLG+ASSCIFLT+SLRL PSL GLSLIFL+ LTIA AVSGC+
Sbjct: 3   MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62

Query: 75  M-----ASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYVREEDGAVIL 134
           +     ++TAS R +G HMV TVLTAIFQG+V+VL++TRTGDFL  LKSYVREEDG VIL
Sbjct: 63  IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122

Query: 135 KLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWP-W 193
           KL+GGL V MF LEW+VL LAF LKY  +++      +     R     Q+EDLKDWP +
Sbjct: 123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDDDFKVRR-----QEEDLKDWPSY 181

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BLAST of Carg23535 vs. TAIR 10
Match: AT5G36710.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 198.4 bits (503), Expect = 5.4e-51
Identity = 115/184 (62.50%), Postives = 139/184 (75.54%), Query Frame = 0


Query: 15  MSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCA 74
           MS+S  +TH +FL  NYILLG+ASSCIFLT+SLRL PSL GLSLIFL+ LTIA AVSGC+
Sbjct: 3   MSKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCS 62

Query: 75  M-----ASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYVREEDGAVIL 134
           +     ++TAS R +G HMV TVLTAIFQG+V+VL++TRTGDFL  LKSYVREEDG VIL
Sbjct: 63  IFASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVIL 122

Query: 135 KLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEGGGGSGNGAAAMRSAKVEQDEDLKDWP-W 193
           KL+GGL V MF LEW+VL LAF LKY  +++      +     R     Q+EDLKDWP +
Sbjct: 123 KLSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDDDFKVRR-----QEEDLKDWPSY 181

The following BLAST results are available for this feature:

BLAST of Carg23535 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958196.1	3.8e-99	100.00	uncharacterized protein LOC111459467 [Cucurbita moschata] >KAG7028304.1 hypothet...	[more]
KAG6596776.1	1.4e-98	100.00	hypothetical protein SDJN03_09956, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023540529.1	1.4e-98	99.48	uncharacterized protein LOC111800866 [Cucurbita pepo subsp. pepo]	[more]
XP_023005568.1	5.5e-98	98.96	uncharacterized protein LOC111498512 [Cucurbita maxima]	[more]
XP_038904159.1	5.3e-85	88.02	uncharacterized protein LOC120090516 [Benincasa hispida]	[more]

BLAST of Carg23535 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg23535 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H1G8	1.8e-99	100.00	uncharacterized protein LOC111459467 OS=Cucurbita moschata OX=3662 GN=LOC1114594...	[more]
A0A6J1L2J4	2.7e-98	98.96	uncharacterized protein LOC111498512 OS=Cucurbita maxima OX=3661 GN=LOC111498512...	[more]
A0A5D3D734	7.5e-85	89.06	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BL21	7.5e-85	89.06	uncharacterized protein LOC103491004 OS=Cucumis melo OX=3656 GN=LOC103491004 PE=...	[more]
A0A0A0L253	3.7e-84	88.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G045140 PE=4 SV=1	[more]

BLAST of Carg23535 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16250.1	8.5e-65	66.67	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G02640.1	6.3e-60	64.13	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G36800.1	5.4e-51	62.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G36710.1	5.4e-51	62.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34124:SF2	F16B3.27 PROTEIN-RELATED	coord: 9..192
None	No IPR available	PANTHER	PTHR34124	F16B3.27 PROTEIN-RELATED	coord: 9..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23535-RA	Carg23535-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane