Carg23507 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAGCGTATTTGGATTTGTTGGCAACGGATTCGTCATAGTGGCGGCTGACACATCGGCGGTGCATAGTATTTTGGTTCATAAATCCAACGAGGACAAGATCATGGTTCTCGATTCCCACAAGCTCGTTGCAGCTAGCGGCGAACCTGGCGACAGGTTTGAGGTTTTTGTTGATGGAAATCTTGTTTCTTCTCTAATCGTTTGCCTTTTGTTAATTATGTGTTTCTTTCGACTGTGATTCGATAGGGTTCAGTTCACGGAGTATATACAGAAGAATGTGGCTTTGTATCAGTTTCGCAATGGTATCCCTTTGACCTCTGCTGCTGCTGCTAATTTTACTCGCGGTGAACTCGCAACCGCCTTGCGGAAGGTAATATCATTTCTTCTTACTAAAACTTTTATTTGACTACATTTTCAACCTTTTAAGTTTTGGGAACTTTGGATCATGGGGGTTGTTTTAAGCGGTTCTAATAATTCATCGTGATGATGAAGTATGAATAGTTTTGTCTTCAATCTAACTTTTACTAGTTTGTGGAGCTTAGTGTTGGATGATGGAAGTCCCACATCGACTAATTTAGGGTGTGATCATGGGAAGCCCAAAGCAAAGTCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCGTCTAACATGGTATTAGAGCCATGCCCTAAACTCAGTCGTGCCACAATAGATTGGTAAATCCTCAAATATCGAACAAAGAACTCTTAAAGAAAAGGAGCCAAGCCCCTCCTCGAAGACAGTCAAAAAATGACTAAGACTCTAAAGGAGTCGAGCCTTGATTAAGGGGAGGTGCACTTTGTTCGAGGGGAGGTGTTGGATGATGGAAGTCCCACATCGACTAATTTAGGGTGTGATCATGGGTTTATAAGTGAGGAATACTACCTCCATTGGTATGAGGCCTTTTGGGGAAGCCCAAAGTAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCGTCTAACACTTAGAACTGTTCAAATGTTTACCGAGCGAGGGAATATTGTCTTGGTTTGTTTTTCTCGAAACCCCTTGATTTCTGTCATTATGTCGTCTTGAAGGATGCCTCACAATGGAAAGAAACTAGACCGATAACCATCTCCGGATGTTGTATGTTAAACACTTTGATTTGCGTTTTTGTTCTTGTATCCAGCTGTGTTGAGTGTAGGCAGGCCAAAGTTCATGTATTTCTCTTATATCATGTTTCGTCTTGCTATTATCATCATCCTATTGGTTCATTTCTTAGTATTAAGGATGGCATTTCATAATCCAGAAAGTTAACAATGATGTGTATTGTACTCTACTTCTTGCCTGAGAAATAGAACCAAGCCCACCGATAGATATTGTCATCTCTGAGTTTTCTCTTTAAGGACTTCTCTGGAAGGGTTTAAAATGCGGCTGTTAGAGAAGGGTTTTCACACTCTTATAATGAATGTTTCGTACCTTTATAAGGAATGATTTGTTTCCTTCTCCAACCGATATGGGATCTCATAATCTACTCCCTTGGTGGCCAGTGCCTCGCTGGCACTCCACCCGATGTCTGGCTCTGATACCATTTGTAACAGCTCAATCCCATTATTAGTAGATAGTCCTTGTAACCTCATTTAATTTCACTAAATTCTGCTAGAAATGTGTTCGAATGTAATTTGATGTGTTGGTGGGCGAGATCGGGTTGGCTTTATAATGGTATGGCATGTGATGTGGTGATGACTGCATAGAATACTAATGACTTTCATGAACGCTGGTTCGTGTTTACAAATGTACACTCTTATGTCTAGTTCTATAAAATCTTCCTTGATCTTGCTCCCCTAGCGTCACCCTCCCCTAGCGTGCACAAGGGTGACGTCTCTTACTGAGTTGTCTGCTTCTCAAAGTACCAGTTATCATGTTTCACCACTACAACTAAGTTTTTAGCCACTGGGGCACAAGTCTTTGTTCATTAAGGATAAGCTAGGCTCGATGTAGAACTCGTGTGAATAACGAGCCCATAAAAGAGGAGTTTTACTGTGTAATTTGGTTTTTGTGCTTAGAACATAATAATAAGTGATCCACTATTCTTCTTGTAATCCTGCATTTAGCTGTATCTTTGAATGAGCAACTGTCTCCTGATTTCAATTGTGAGTTCTTGATTTTCAGAATCCATATTCTGTGAACATTCTTTTGGCGGGATATGACAAGGAGACAGGACCATCCCTGTTTTACATTGACTATATTGCCACCCTTCACAAGGTTGACAAGGGAGCTTTTGGTTATGGATCTTACTTTTCACTCTCCATGATGGATAGACACTACCATAGTGGTATGACAGAAGAAGAAGCTATTGATTTGGTTGATAAATGCATACTTGAGATCAGGTCCAGGCTTGTTGTGGCCCCACCGAACTTCGTTATCAAAATTGTAGACAAGAATGGAGCTAGGGAGGTTGCTTGGCGTCAATCCATCAAGGATGGAGCTAGCGTTCCTTCAGCTTAA ATGGAGAGCGTATTTGGATTTGTTGGCAACGGATTCGTCATAGTGGCGGCTGACACATCGGCGGTGCATAGTATTTTGGTTCATAAATCCAACGAGGACAAGATCATGGTTCTCGATTCCCACAAGCTCGTTGCAGCTAGCGGCGAACCTGGCGACAGGGTTCAGTTCACGGAGTATATACAGAAGAATGTGGCTTTGTATCAGTTTCGCAATGGTATCCCTTTGACCTCTGCTGCTGCTGCTAATTTTACTCGCGGTGAACTCGCAACCGCCTTGCGGAAGAATCCATATTCTGTGAACATTCTTTTGGCGGGATATGACAAGGAGACAGGACCATCCCTGTTTTACATTGACTATATTGCCACCCTTCACAAGGTTGACAAGGGAGCTTTTGGTTATGGATCTTACTTTTCACTCTCCATGATGGATAGACACTACCATAGTGGTATGACAGAAGAAGAAGCTATTGATTTGGTTGATAAATGCATACTTGAGATCAGGTCCAGGCTTGTTGTGGCCCCACCGAACTTCGTTATCAAAATTGTAGACAAGAATGGAGCTAGGGAGGTTGCTTGGCGTCAATCCATCAAGGATGGAGCTAGCGTTCCTTCAGCTTAA ATGGAGAGCGTATTTGGATTTGTTGGCAACGGATTCGTCATAGTGGCGGCTGACACATCGGCGGTGCATAGTATTTTGGTTCATAAATCCAACGAGGACAAGATCATGGTTCTCGATTCCCACAAGCTCGTTGCAGCTAGCGGCGAACCTGGCGACAGGGTTCAGTTCACGGAGTATATACAGAAGAATGTGGCTTTGTATCAGTTTCGCAATGGTATCCCTTTGACCTCTGCTGCTGCTGCTAATTTTACTCGCGGTGAACTCGCAACCGCCTTGCGGAAGAATCCATATTCTGTGAACATTCTTTTGGCGGGATATGACAAGGAGACAGGACCATCCCTGTTTTACATTGACTATATTGCCACCCTTCACAAGGTTGACAAGGGAGCTTTTGGTTATGGATCTTACTTTTCACTCTCCATGATGGATAGACACTACCATAGTGGTATGACAGAAGAAGAAGCTATTGATTTGGTTGATAAATGCATACTTGAGATCAGGTCCAGGCTTGTTGTGGCCCCACCGAACTTCGTTATCAAAATTGTAGACAAGAATGGAGCTAGGGAGGTTGCTTGGCGTCAATCCATCAAGGATGGAGCTAGCGTTCCTTCAGCTTAA MESVFGFVGNGFVIVAADTSAVHSILVHKSNEDKIMVLDSHKLVAASGEPGDRVQFTEYIQKNVALYQFRNGIPLTSAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLFYIDYIATLHKVDKGAFGYGSYFSLSMMDRHYHSGMTEEEAIDLVDKCILEIRSRLVVAPPNFVIKIVDKNGAREVAWRQSIKDGASVPSA Homology
BLAST of Carg23507 vs. NCBI nr
Match: XP_022956298.1 (proteasome subunit beta type-2-A-like [Cucurbita moschata] >XP_022979470.1 proteasome subunit beta type-2-A-like [Cucurbita maxima] >KAG6582311.1 Proteasome subunit beta type-2-A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018723.1 Proteasome subunit beta type-2-A, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 407.9 bits (1047), Expect = 5.1e-110 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
BLAST of Carg23507 vs. NCBI nr
Match: XP_023527188.1 (proteasome subunit beta type-2-A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 406.4 bits (1043), Expect = 1.5e-109 Identity = 204/205 (99.51%), Postives = 204/205 (99.51%), Query Frame = 0
BLAST of Carg23507 vs. NCBI nr
Match: XP_038875710.1 (proteasome subunit beta type-2-A-like [Benincasa hispida]) HSP 1 Score: 399.4 bits (1025), Expect = 1.8e-107 Identity = 199/205 (97.07%), Postives = 203/205 (99.02%), Query Frame = 0
BLAST of Carg23507 vs. NCBI nr
Match: XP_008438650.1 (PREDICTED: proteasome subunit beta type-2-A [Cucumis melo] >KAA0049346.1 proteasome subunit beta type-2-A [Cucumis melo var. makuwa] >TYK17212.1 proteasome subunit beta type-2-A [Cucumis melo var. makuwa]) HSP 1 Score: 397.5 bits (1020), Expect = 6.9e-107 Identity = 197/205 (96.10%), Postives = 203/205 (99.02%), Query Frame = 0
BLAST of Carg23507 vs. NCBI nr
Match: XP_022138279.1 (proteasome subunit beta type-2-A-like [Momordica charantia]) HSP 1 Score: 397.1 bits (1019), Expect = 9.0e-107 Identity = 197/205 (96.10%), Postives = 203/205 (99.02%), Query Frame = 0
BLAST of Carg23507 vs. ExPASy Swiss-Prot
Match: O23714 (Proteasome subunit beta type-2-A OS=Arabidopsis thaliana OX=3702 GN=PBD1 PE=1 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 6.7e-97 Identity = 174/198 (87.88%), Postives = 188/198 (94.95%), Query Frame = 0
BLAST of Carg23507 vs. ExPASy Swiss-Prot
Match: O24633 (Proteasome subunit beta type-2-B OS=Arabidopsis thaliana OX=3702 GN=PBD2 PE=1 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 5.3e-94 Identity = 170/198 (85.86%), Postives = 182/198 (91.92%), Query Frame = 0
BLAST of Carg23507 vs. ExPASy Swiss-Prot
Match: Q9LST6 (Proteasome subunit beta type-2 OS=Oryza sativa subsp. japonica OX=39947 GN=PBD1 PE=2 SV=2) HSP 1 Score: 297.4 bits (760), Expect = 1.3e-79 Identity = 146/193 (75.65%), Postives = 165/193 (85.49%), Query Frame = 0
BLAST of Carg23507 vs. ExPASy Swiss-Prot
Match: Q55DY7 (Proteasome subunit beta type-2 OS=Dictyostelium discoideum OX=44689 GN=psmB2 PE=3 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 4.2e-46 Identity = 89/191 (46.60%), Postives = 132/191 (69.11%), Query Frame = 0
BLAST of Carg23507 vs. ExPASy Swiss-Prot
Match: P49721 (Proteasome subunit beta type-2 OS=Homo sapiens OX=9606 GN=PSMB2 PE=1 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 8.7e-44 Identity = 87/191 (45.55%), Postives = 127/191 (66.49%), Query Frame = 0
BLAST of Carg23507 vs. ExPASy TrEMBL
Match: A0A6J1ITC5 (Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111479173 PE=3 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 2.5e-110 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
BLAST of Carg23507 vs. ExPASy TrEMBL
Match: A0A6J1GWE4 (Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111458036 PE=3 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 2.5e-110 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0
BLAST of Carg23507 vs. ExPASy TrEMBL
Match: A0A5D3D072 (Proteasome subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00590 PE=3 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 3.4e-107 Identity = 197/205 (96.10%), Postives = 203/205 (99.02%), Query Frame = 0
BLAST of Carg23507 vs. ExPASy TrEMBL
Match: A0A1S3AXK5 (Proteasome subunit beta OS=Cucumis melo OX=3656 GN=LOC103483693 PE=3 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 3.4e-107 Identity = 197/205 (96.10%), Postives = 203/205 (99.02%), Query Frame = 0
BLAST of Carg23507 vs. ExPASy TrEMBL
Match: A0A6J1C9Q2 (Proteasome subunit beta OS=Momordica charantia OX=3673 GN=LOC111009495 PE=3 SV=1) HSP 1 Score: 397.1 bits (1019), Expect = 4.4e-107 Identity = 197/205 (96.10%), Postives = 203/205 (99.02%), Query Frame = 0
BLAST of Carg23507 vs. TAIR 10
Match: AT3G22630.1 (20S proteasome beta subunit D1 ) HSP 1 Score: 354.8 bits (909), Expect = 4.8e-98 Identity = 174/198 (87.88%), Postives = 188/198 (94.95%), Query Frame = 0
BLAST of Carg23507 vs. TAIR 10
Match: AT4G14800.1 (20S proteasome beta subunit D2 ) HSP 1 Score: 345.1 bits (884), Expect = 3.8e-95 Identity = 170/198 (85.86%), Postives = 182/198 (91.92%), Query Frame = 0
BLAST of Carg23507 vs. TAIR 10
Match: AT4G14800.2 (20S proteasome beta subunit D2 ) HSP 1 Score: 334.7 bits (857), Expect = 5.1e-92 Identity = 170/214 (79.44%), Postives = 182/214 (85.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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