Carg23484 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23484
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	UBA domain-containing protein
Location	Carg_Chr12: 9712798 .. 9715669 (+)
RNA-Seq Expression	Carg23484
Synteny	Carg23484

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTCGTAGTGAAAAACCCTTAATTTCTCGTCGGCTTCTTAGGAACTTCTTACAAAGGTGAACTGTATGTTAGCTTTATTTATCAGTCTTCTTTCATTCTCAATTTACAAATCCTCGTGCATCGTTCTTCAGCAAAAAGAAGCTACACTGTTCGAATCAAGTTGTGCTTCAATTTATTGTACTGCTATCTACAGAGTTTGATTTTGTTAGGTTGTGTTGTTTTCATATCAGCTGTTTGTTCTTATGTTTCTCTTATTGCTGCTGGAATTTAGGAAGTTTAGGTGGAAAATCTATTGGGTTTCTTTGAATGCCAAAAACCCTTTTGGAATTTGAAGTTATATTGTGAATTTTTATTTGAAACTTGGATGATATTGGGTAGAACTGAAATTTTTCATTGAGATATTGGTTGTTTAAGTTGTGAGATCCTACGTCGGTTGGGGAGGAGAATGAAACACTCTTTATAAGGGTGTGGGAACCTCTCCCTAGCAGACGCGTTTTAAAAACCTTGAGGGGAAGCCCATAAGGGAAAGCTCAAAGAAGACAATATCTGCTAGCGGTGGATTTCGGCCGTTATGAATGGTATCAGTGCTAGACACTAGGCGATGTGCTAGCAAAGAGGCTGAGCCGCAAGGGGTGGACATGAGGCGATGTGTCAGGAAGGACGTGAGCCTCGAAGGGGGTGGATTTGGTGGAGGTCCCACATCAGTTGGAGAAAGGAATGAGGGCCAGCGAGGATGCTGGGACCCAAAGGGAGTGGATTGTGAGATCCCACGTCAGTTGGAGAGGAGAACGAAACACCCTTTATAAGGGTGTGGAAACCTCTCCAGCCCCAAAGGGGGGTGGATTATGAAATCTCACATCGGTTGGGGAAGAAAACGAAACACTTTTTATAAGGGTGTGGAAACCTCTCTAGCCCCGAAGGGAGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACACTCTTTATAAGGGTGTGAAAACCTCTCCCTAGCATACGCGTTTCAAAAACCTTAAGGGGAAGTCTGAAAGGGAAAACCAAAGAAGACAATATCTGCTAGTGGTGTGTATTGTGAGATCTCACATCGGTTGAGGAGGAGAACGAAACACCCTTTACAAGGGCGTGGAAACCTCTCCTTAGCAGACGCGTTTCAAAAACCTTAAGGGGAAGCCTGAAAGTAAAAACCCAAAGAAAACAATATCTATTAGTGGTGTGTTTGGGTCATTACATGAGGATGTATTGTTAATAACTAATGTTTTCTCTTAGGAGCATATATGATTTGGTAAATTTGTTGTTAATTGAAATTTGATATCTCTCGTAGGAATGGCTTTTCTGGAGGTAAAACAGAAACTCTTACGCAAGGTCGAATCTTTAGGATTCTCGAGGGCCCGAGCAGCCCGAGCACTTCATGTTACTGGTGAGAATGATTGATGACATTCGTAGCTCGAACATAACAATCATATGCAATGATTTGTTATTTGACAAAATATTTGAGTTATGTTGATTACACTTCATGTCACAAGTTCTCAGATCAGTACTTTCTTTGTTCTTCAGGAAATGCCAGCTTTGAAGATGCGATCGATTGGATCGTTCATCACGAGAACGATCCGGATATTGATCAAGTGCCCCTGGTATAATTCTCTATTCATATAGACTTCTTCGGTTAGTTTTTAAGATAAATTGTAATTTAGATTACCTTGTTAATCAAATATCTCAAGGCAAAAACACTAGTTCGAGATTCGAATCACTCCACGAGCAAGATTGACCACATCAAGCTTGAATGATTCTACATAGAATTACAAAGAAACTTAGCCATTGGCTAAAACAAAGCACAAATGCCTCTTCTACTACATTTTCCAAGTCCCTCTCTACAAAGATAACATACATGACTTTATATAGCTTCAAAATGAAAACCTTTAACCGGCCTGAGGCATTCCAAGAGTTGTAACATTCGTACTTTTTTACCATAATTAGCCACTATGTAGATTACGTCTTAAAATACATTAAAGAAACACCATAACTCTAAATTACCATCCATAATACATTTGTAACCATCTAAGAATAAATGAAGCTCCACTTGAAGTACCTTGAAACATTTGTTGCATAAATGAAGCTTGATTCTTCTTAAGGTGACGTTAATATTGCATGATTAAGATGTCTGGTTCATATCAAATGTTATGCAGGTAGCAATAGAGATCGATATCGAATCTCCCGAACCATTTCATATCACAGAGGAAACGAAAAAGAAAGCTAATGAATTAAGGTATGATGCCAGAATTTGTTCATTGTGAACTGCCATCATAAACTTAGAACTGTTTAGTCTTCAGTTCCATCATATTAAATTCTTTGATAGTTCACTTAAATTCTTATTGATTTTTCTATGTTTAGGGATCAAATACTGAAAGAAAAGGAAAAGGAAGAAAAAGAGTTAGAAAAACGAAGGGAAAAGGTATCGCATTCGTTCGCGTTCGTTCGGGAAAGAACGAATTCTATCTTGATTTAGAATTTGATCTGTAAATTTGTATGCTCTCCAGTCTCCATGACAATATGTTTTGATTCTGTTTCCATGAAAATCAACTTTCATGATTTAGTGCTTTCGATATCTATAGGATCAAATTCGTTCGGGGAAAGAACTGCAAGAAGCGAAACGAATGGCAGAAGGAACTGAATGGAAACGGTGTGTTTTCTTGTTCAATCTTGTTTCTGACATCATTCTCTGACACATAAAATGTTGTAACTTTCTGTTTGGAGTGAAAGATTTGTTCTTATTTGCTCAGCTATAAAGATTCTAGACAAGCTGAGATAAAGGAGGAGAAAAAAGCAAAAGAAAAGGTTTTACAAGCACTAGAACAGAACAAG

mRNA sequence

ATGGCTTCTCGTAGTGAAAAACCCTTAATTTCTCGTCGGCTTCTTAGGAACTTCTTACAAAGGGATCAAATACTGAAAGAAAAGGAAAAGGAAGAAAAAGAGTTAGAAAAACGAAGGGAAAAGGATCAAATTCGTTCGGGGAAAGAACTGCAAGAAGCGAAACGAATGGCAGAAGGAACTGAATGGAAACGCTATAAAGATTCTAGACAAGCTGAGATAAAGGAGGAGAAAAAAGCAAAAGAAAAGGTTTTACAAGCACTAGAACAGAACAAG

Coding sequence (CDS)

ATGGCTTCTCGTAGTGAAAAACCCTTAATTTCTCGTCGGCTTCTTAGGAACTTCTTACAAAGGGATCAAATACTGAAAGAAAAGGAAAAGGAAGAAAAAGAGTTAGAAAAACGAAGGGAAAAGGATCAAATTCGTTCGGGGAAAGAACTGCAAGAAGCGAAACGAATGGCAGAAGGAACTGAATGGAAACGCTATAAAGATTCTAGACAAGCTGAGATAAAGGAGGAGAAAAAAGCAAAAGAAAAGGTTTTACAAGCACTAGAACAGAACAAG

Protein sequence

MASRSEKPLISRRLLRNFLQRDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKEKVLQALEQNK

Homology

[Close]

BLAST of Carg23484 vs. NCBI nr
Match: KAG7021025.1 (hypothetical protein SDJN02_17713, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 155.2 bits (391), Expect = 2.7e-34
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  MASRSEKPLISRRLLRNFLQRDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGT 60
          MASRSEKPLISRRLLRNFLQRDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGT
Sbjct: 1  MASRSEKPLISRRLLRNFLQRDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGT 60

Query: 61 EWKRYKDSRQAEIKEEKKAKEKVLQALEQNK 92
          EWKRYKDSRQAEIKEEKKAKEKVLQALEQNK
Sbjct: 61 EWKRYKDSRQAEIKEEKKAKEKVLQALEQNK 91

[Close]

BLAST of Carg23484 vs. NCBI nr
Match: XP_022938055.1 (UBX domain-containing protein 1-like isoform X2 [Cucurbita moschata] >XP_022938056.1 UBX domain-containing protein 1-like isoform X2 [Cucurbita moschata] >XP_022938058.1 UBX domain-containing protein 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 118.6 bits (296), Expect = 2.8e-23
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 21  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK 80
           RDQILKEKEKEEKELEKRREKD+IRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK
Sbjct: 84  RDQILKEKEKEEKELEKRREKDRIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK 143

Query: 81  EKVLQALEQNK 92
           EKVLQALEQNK
Sbjct: 144 EKVLQALEQNK 154

[Close]

BLAST of Carg23484 vs. NCBI nr
Match: XP_022938054.1 (E3 ubiquitin-protein ligase BRE1A-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 118.6 bits (296), Expect = 2.8e-23
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 21  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK 80
           RDQILKEKEKEEKELEKRREKD+IRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK
Sbjct: 116 RDQILKEKEKEEKELEKRREKDRIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK 175

Query: 81  EKVLQALEQNK 92
           EKVLQALEQNK
Sbjct: 176 EKVLQALEQNK 186

[Close]

BLAST of Carg23484 vs. NCBI nr
Match: XP_022965831.1 (UBX domain-containing protein 1-like isoform X2 [Cucurbita maxima] >XP_022965833.1 UBX domain-containing protein 1-like isoform X2 [Cucurbita maxima] >XP_022965834.1 UBX domain-containing protein 1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 112.8 bits (281), Expect = 1.5e-21
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 21  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK 80
           RDQILKEKEKEEKELEK+REKD+ RSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK
Sbjct: 84  RDQILKEKEKEEKELEKQREKDRNRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK 143

Query: 81  EKVLQALEQNK 92
           EKVLQ LEQNK
Sbjct: 144 EKVLQTLEQNK 154

[Close]

BLAST of Carg23484 vs. NCBI nr
Match: XP_022965830.1 (uncharacterized protein LOC111465598 isoform X1 [Cucurbita maxima])

HSP 1 Score: 112.8 bits (281), Expect = 1.5e-21
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 21  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK 80
           RDQILKEKEKEEKELEK+REKD+ RSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK
Sbjct: 116 RDQILKEKEKEEKELEKQREKDRNRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK 175

Query: 81  EKVLQALEQNK 92
           EKVLQ LEQNK
Sbjct: 176 EKVLQTLEQNK 186

[Close]

BLAST of Carg23484 vs. ExPASy TrEMBL
Match: A0A6J1FC35 (UBX domain-containing protein 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444260 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.3e-23
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 21  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK 80
           RDQILKEKEKEEKELEKRREKD+IRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK
Sbjct: 84  RDQILKEKEKEEKELEKRREKDRIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK 143

Query: 81  EKVLQALEQNK 92
           EKVLQALEQNK
Sbjct: 144 EKVLQALEQNK 154

[Close]

BLAST of Carg23484 vs. ExPASy TrEMBL
Match: A0A6J1FCY3 (E3 ubiquitin-protein ligase BRE1A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444260 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.3e-23
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 21  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK 80
           RDQILKEKEKEEKELEKRREKD+IRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK
Sbjct: 116 RDQILKEKEKEEKELEKRREKDRIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK 175

Query: 81  EKVLQALEQNK 92
           EKVLQALEQNK
Sbjct: 176 EKVLQALEQNK 186

[Close]

BLAST of Carg23484 vs. ExPASy TrEMBL
Match: A0A6J1HMR5 (UBX domain-containing protein 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465598 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 7.3e-22
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 21  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK 80
           RDQILKEKEKEEKELEK+REKD+ RSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK
Sbjct: 84  RDQILKEKEKEEKELEKQREKDRNRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK 143

Query: 81  EKVLQALEQNK 92
           EKVLQ LEQNK
Sbjct: 144 EKVLQTLEQNK 154

[Close]

BLAST of Carg23484 vs. ExPASy TrEMBL
Match: A0A6J1HPV0 (uncharacterized protein LOC111465598 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465598 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 7.3e-22
Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 21  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK 80
           RDQILKEKEKEEKELEK+REKD+ RSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK
Sbjct: 116 RDQILKEKEKEEKELEKQREKDRNRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK 175

Query: 81  EKVLQALEQNK 92
           EKVLQ LEQNK
Sbjct: 176 EKVLQTLEQNK 186

[Close]

BLAST of Carg23484 vs. ExPASy TrEMBL
Match: A0A6J1ESJ7 (UBX domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436126 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 4.8e-13
Identity = 53/71 (74.65%), Postives = 63/71 (88.73%), Query Frame = 0


Query: 21  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK 80
           RDQI KEKEKEEK+LE++REKD+IRSGKELQEAKR AE  E KRY DSRQA+ +EEK+A+
Sbjct: 84  RDQIRKEKEKEEKKLERQREKDRIRSGKELQEAKRTAEEAERKRYIDSRQADKQEEKRAR 143

Query: 81  EKVLQALEQNK 92
           EKVLQ L+Q+K
Sbjct: 144 EKVLQKLQQDK 154

[Close]

BLAST of Carg23484 vs. TAIR 10
Match: AT1G04850.1 (ubiquitin-associated (UBA)/TS-N domain-containing protein )

HSP 1 Score: 56.2 bits (134), Expect = 1.6e-08
Identity = 39/71 (54.93%), Postives = 54/71 (76.06%), Query Frame = 0


Query: 21  RDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAK 80
           R++  K+KE+EEK +E+ REK++IR GKEL EAKRM E  E KR    R+AE +EEK+A+
Sbjct: 189 RERARKKKEEEEKRMEREREKERIRIGKELLEAKRMEEVNERKRLMFLRKAEKEEEKRAR 248

Query: 81  EKVLQALEQNK 92
           EK+ Q LE++K
Sbjct: 249 EKIRQKLEEDK 259

[Close]

BLAST of Carg23484 vs. TAIR 10
Match: AT5G48690.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567); BEST Arabidopsis thaliana protein match is: ubiquitin-associated (UBA)/TS-N domain-containing protein (TAIR:AT1G04850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 4.7e-05
Identity = 33/72 (45.83%), Postives = 51/72 (70.83%), Query Frame = 0


Query: 20  QRDQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKA 79
           +++Q  K +E++E + E+ REK++IR+GKEL E KR+AE  E KR    R+AE  EEKKA
Sbjct: 40  RKEQARKLREEQETKREREREKERIRAGKELMETKRIAEENERKRNIALRKAEKDEEKKA 99

Query: 80  KEKVLQALEQNK 92
           +EK++  +  +K
Sbjct: 100 REKIMLKVNADK 111

[Close]

BLAST of Carg23484 vs. TAIR 10
Match: AT5G48690.1 (CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-associated (UBA)/TS-N domain-containing protein (TAIR:AT1G04850.1); Has 7001 Blast hits to 5165 proteins in 492 species: Archae - 9; Bacteria - 505; Metazoa - 2653; Fungi - 905; Plants - 287; Viruses - 19; Other Eukaryotes - 2623 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 6.2e-05
Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 22  DQILKEKEKEEKELEKRREKDQIRSGKELQEAKRMAEGTEWKRYKDSRQAEIKEEKKAKE 81
           +Q  K +E++E + E+ REK++IR+GKEL E KR+AE  E KR    R+AE  EEKKA+E
Sbjct: 92  EQARKLREEQETKREREREKERIRAGKELMETKRIAEENERKRNIALRKAEKDEEKKARE 151

Query: 82  KVLQALEQNK 92
           K++  +  +K
Sbjct: 152 KIMLKVNADK 161

The following BLAST results are available for this feature:

BLAST of Carg23484 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021025.1	2.7e-34	100.00	hypothetical protein SDJN02_17713, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022938055.1	2.8e-23	98.59	UBX domain-containing protein 1-like isoform X2 [Cucurbita moschata] >XP_0229380...	[more]
XP_022938054.1	2.8e-23	98.59	E3 ubiquitin-protein ligase BRE1A-like isoform X1 [Cucurbita moschata]	[more]
XP_022965831.1	1.5e-21	94.37	UBX domain-containing protein 1-like isoform X2 [Cucurbita maxima] >XP_022965833...	[more]
XP_022965830.1	1.5e-21	94.37	uncharacterized protein LOC111465598 isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg23484 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg23484 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FC35	1.3e-23	98.59	UBX domain-containing protein 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FCY3	1.3e-23	98.59	E3 ubiquitin-protein ligase BRE1A-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1HMR5	7.3e-22	94.37	UBX domain-containing protein 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HPV0	7.3e-22	94.37	uncharacterized protein LOC111465598 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1ESJ7	4.8e-13	74.65	UBX domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114361...	[more]

BLAST of Carg23484 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04850.1	1.6e-08	54.93	ubiquitin-associated (UBA)/TS-N domain-containing protein	[more]
AT5G48690.2	4.7e-05	45.83	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT5G48690.1	6.2e-05	47.14	CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor E...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 21..45
None	No IPR available	COILS	Coil	Coil	coord: 70..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..68
None	No IPR available	PANTHER	PTHR46713:SF4	UBA/UBX DOMAIN-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 17..91
None	No IPR available	PANTHER	PTHR46713	F13M7.16 PROTEIN	coord: 17..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23484-RA	Carg23484-RA	mRNA