Carg23431 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23431
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	5'-3' exoribonuclease
Location	Carg_Chr05: 10688399 .. 10702126 (+)
RNA-Seq Expression	Carg23431
Synteny	Carg23431

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGTCCCTGCCTTCTACAGGTGGCTTGCCGACCGGTACCCCCGGTCGATCGCCGATGTGGTCGAGGAAGAGCCAGTTGATGGCCCCAACGGGGTCGTCTTGCCGATCGACGTCTCCAAGCCTAACCCTAATGGAATGGAGTTTGACAACTTGTATTTGGATATGAATGGCATAATTCATCCGTGCTTTCATCCTGAAGGCAAGGTATTTAGTTCTTGACCTCCTTTACTATTAATAACAGTTTTGATTGTAAATAGCACACACATCATACATTCACAGCCAGAAATGACATTATAGTTGCGTTAATGTGGCAAGCAATAGTTTCTTGAATCAGATATACTACAACATAATACTACCAGCAGTGTTTGGAGAAATCAAAAATGTAACATTGCGAAATTAATAGATGTTGAAAATGGATAATTCTAAATAAGCTTGTGGTTCGGCGCTGGGAATTTGTCTATTGCGGAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACATTGAGCACTTCTGTATCGAGTGATCTGGAGGTAGAGATCTGTTGGAGTTTGGAAGGAGGGCAGTAGAAATTTTAAAGGGAAACATGACAATAATAGATTCTACCTTATGGAATACGTATGGAACAAAATTTCATTTGGTCATTGAAAATTTGAGAGGAAGATACAAAAAGGATGGAGATAAGAAACATATATATTAGCCTAACGTGACTTACAAAGTCACCCCTTGGTTTACTAACTGCACAGCCATCTGTTGTATGATGCATTTGTTTTGATGCTAATATCTTGTACTTGGATGACCTTTTTGATTACCTCACACTTGATTCTTTGAAGTTAGAGTATCGTTTGAATTCAATAGATTGTCCTCCTGGTTCTTTCAAAGATTCTCATATCCCTCAGAAGGCATACTTTAAGGACATGAACATGTTTTGCTAGATTCTAGTAGCTTTAAAGAAAACCTATACTATTTCTCAAGGTTTTACAAGATTTCGTATGCCTAAATAAGTTTATTATTTAGTAAAAGACTCTTGAAGTATAAAGATTATAATTAATTTATTTATTTGTGATTAGTAAAAAAAACTTGAATAGCCAATAATGCATTTGAATTTGTTGCTAATAGCAGAGACTCATTTGAATCTTGTTACACTTTCGGTTGAATGTATTTGGATACTTCTCTTTGGGCTTTCAATAGTAAAGAATTTTGTTGCTACCTTTTCTTCTTCTTCATCACCGTCATTTATTTTTTCTACTTGAAGAACACTTTTGTAATCAACCGGACCAGCATCCTTATGTTTATTAAACTTGCCCGCCAATACAAATACAGATGAGATCTTAGGTGTGCATTTCATTAGCTTCACATAAAAAAGATTATTTGTTTTTGAAAAATCTTACATTGCATCTTTTGTTTCCTTTTGAAGATTTGTATCTTAAGGTATTAATGTCACGTCTTTATCTACCACGTGTGTATATCTTTCCATACTCTAATCTTTAGTCTCTAGCTATTTATATCTTTCACAATCAATATATTGGTATCCATGGATGAAAAGTATCTGATTCAATATGCTGATCAGCAGGCACAAGAGAATAATGAAGAAATGAGAGGTAGAGCTAGAAGAGAAAATGGTCCTGCGCCCCCAGTTCCAACAATTGACAAGGTCTTAGTTAGCACGTTTATTTCTTAATGGTTTTGTATGTATTCATATACTTATTCATTTTTTAATGGTTTAATGGTTATATGATTATTACTAGCCTGTTAGTCTTGATTGAAGTGCTTGAGTTCACAATTATTTGATGCAAGACATCTGGCCAATATATGTCCTTATTCCTCTCTGGATATTACTTCTTGCCTCATGTTCACACTTGAAATAAGATTTTGCCTATAATTTGTGCACGTGTTTTTAGTAAGAGGTGGCGGGCAGGAAAGGGGTTGTTCTTTTGGTCTGAATGTTATTTGTATTGTGTATGCCTATTGTCTATATAATTTTTCTTTTCAAAATTTTGAATGTATTTTGCATCGGCAGCAAATTAGAGTTAATCCCAGTGATAGAATTAATTCAAAAAAGTTTTGATAGAACACCAAGAAGGCGCATGAACTTTGATCATCTCAAAGCTTTCGTCCCAAGGAGCACATAGTTGTCAAAGATCCTTTTATTCTTTCAACCCAAATTCCAGAGATGGAATTTTTACGAAGGTTGACCGGAATGAATTTTGATTTCCTTCTGAAACCATACCTGCAAAGAAGAGCAAATATGCTGTCCTAAGCCTTCAGATTATTAATCCACGAGCAACCTAAGATTACAACAATTCCTCCAAGTGTGGTGCTCTCTGTATGAACAATGGGACAAAAAAGAAAAAAAAAAAACATGACGAAGCATTTAGACATAAACCCAATTTGTGGTATTAAAACTTCTTAATTGTCCTTGGACCCTCAATTGTAAAACTTGAAGATTCTTTTTAATTGATGAGAAATAATGTTTTACCCCCTAAACTGAAACTAATTTAAGTCTTACCATTTTTTTTAATGAGAAAATGAGCCCTGAAGTCTTTTGCCTTCACATTAGTAATTGAAGTCTTACCATTAGCTATTATACAATGAGCTCTGGAGTCTTTTGTCTTAACATTTAGGCTGGTCTCTTATGGGGTGCAAGTGCAACTGCCTCACTTCTTCCTTCTTGGCTCCACCCATACTCTTATGCATATTAGTTTTTCATTCCCACCGTGATTTTATTGAAGACTTGGTTTAAGAATCTTTCATAGATGGATGGACACGTGGTAGGAATAATCCAACTTTATAAAATATGAGTAGGATTGACTGGTAGGAAAATTCACTGGGATAACAGGTACCAGGGATCTATTTGGTCCCACTTATGCATTATGTCTATGTTATCGTAAAAGAACTAATGTGTAAATTGTTTATAAGATGTAAGCTATGTTTTTTACTGGAGTATTTTGAGAAATTTTATTTTTACAAGCCAAGTGATAGATAAGTTTTTCTTATCATTAAATCCAGAAAGAAGTTGGTCCAGAATTTGGATGAAGCTAGCATAGGCTTCATCAGTTTAGAACAAGCAGAGCACCGTAAAATCTAGGAAGAGTATGCTTTGCTTCTTCTTAATTCTTGGTTTTAGTTGCCTAGATGTATAAAATATTACAGAGTAGTCATATCAATTGGATAGGAATTCTGTGCGTGTGTGTATGCGTGAGGCATTTTTATGGTCCCATGAATTGAAAGGATCAACAAATTCCTCCTTTTTAGATTTTTTTGAATTGGAAGGCTTATATGTAATTTCATGGTGATGGGGTGTTTGAAATGCATATGTTTTGATAGACGTATAAATATGGGTCTTGTATTCTTTTCCATTTCCCTTTTTCCAGATCAAGTTAGGGGAGCCTGGATACAAGGAGAGGTATTATGCTGAGAAGTTCAATGCTAACTCAGAAAACATTGCTGAAATAAAACAAGATGTGGTAAGTCCATTCCTTGTGCTTGCGTCATTAATATAATAATAGTAGTAATAATAATAATAATAATAATTATTATTATTATTATTATTTGTCTATTTACTGGAGGATGTAATTCTTAGTGGGTCTCGTCCTCTCCAAAATTTATACTCCAAACATCTTTGAATTCTTGCTATTCCCCTACCTATTTAGGGCAGGGAAAGAATATTATTGAGTAGTCTCCAACCATACATCCTCCCAGAATCGTAAGGTTAAACCATGGTTTACCTACCACTAAACCTGAAGACTCCTGAATAATGTTTAATATGTAGATAATATTAATTTAGCGCTAGCCTTTGATTTGTTTTTCCAGCACTGTACCGTCGATATGTTTATCCCAAGTGTTGTACATTAGTGGTGAAAGCTTTTAGATTCAACCAAGGTCCTAAAGGTCTTGAACATTTTTGGATTCCCTACGTGGAATATTTTAGATATTTCTAATTTTGGTAGCTTAATAGATTGAGAGCTAGCATTGCTTTTAATCCATCAACAATAGGCAAATATTATTTAAATTGGATGCAGATTTTTTTTTTTAATATTATCAAATAGCACTAATAATGACTTGAAATAAATACCCCTTGAGTAGTTTTGATGAACAGAAGTAGTTGATGTGCTCATATTTTGTGCAGGTCTTGAAGTATGTGGAGGGTTTATGTTGGGTCTGTCGATATTACTATTCAGGGGTTTGCTCTTGGCAATGGTAAAATTCATTTCCTTATTGTGACAAATGTGTGTATTCTTCGGAGTACCATATTTTCTTTGGTTTTCAAGTTTTCCATTAATTTTCCGAGGATATGCATGCAATGTCTTGGCTACGGATTTGTTTTTGAGTTTTGATTGAAAACCACCATTGAATTAAGAACGAGGGCAAATTAGTTGTTTGGTATTCGTGTATTTTGTTGTATGGCAAGGGGTAGTAGTCACGTTGTCAATGTTTCTATTGAAACTTGCTTTTTTGGTTCAGGTATTATCCTTACCATTATTCACCTTTTGCCTCTGACCTTGAAAACTTGGCTGATTTGGAGATAACCTTTTTCCTCGGAGAGCCATTTAAACCTTTTGATCAACTGATGGGAACGCTACCAGCTGCAAGGTTTTTTCCTTTTAATTATTTGTATTTTATCCTGCTAGTCTTTTTGAAGTTATATATTGCTTAACAAAGATTAAATTATATCTGAATTTTGCTTACAAGAAGTGAAGCACTTTCTATTGAAACCATAAAAAGTTCAAAGGCTAAACCAGCAAAAGAATGACGTTGGAATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTGTTGGCGCTAATCAAGAAATGTGTCAGCAGAATACTTTCCTCATTTGAGTAGACTTATTTATTGGAAGCCAAAAACCAAGCTAAAGGCAGACTGATCCTTATATGATTTTGTCTCAAAAGATTCTCTATTTTCTTTTCAGCATATACTCTTATATTGTCTTGTTTAGCTTATCAACCGTCTTCATTTTTATGCATCATGCGTATTGCTTATATGCATACAGTTCAACCGCTCTTCCTGAGAAATACAGAAACTTGATGACCGATCATTCATCGCCAATCCTTGAATTTTATCCTTCAGGTAATCACTTAATCACTATTTGTTTTGATTCTTTTGTAATTTTTCCTCTTTCCTCAAATGGCGTTTGTTTTTTGTGAATAGATTTTGAGATTGACATGAATGGAAAGCGTTTTCAATGGCAGGTACTATAGTTTTTGGTTTTTTTTTATTTTTATTTTTTTATGAGCAAGAAGCTTATTTATTTATTAATTAAAATATTGTGAAGTACTATTTGTTCAAGAATCTCTTTCGATATTTGTTTAACTGATGAAAGCCATTGGATCTTTTTTCCTTGTGAAATTCAGGGTGTTGCCAAATTGCCTTTCATTGACGAGAGAAAGTTGCTTGCTCAAACTAGGAGACTTGAAAGCGCTTTAACGGTATTTAAGAGAAATTTATATACATTTAGTCTTCCAATTATTAAAACTAAATTTGGTTGATAGACCTTCCCAGATAATTTTTGCTTTTAGTACTGGACATTTGGTCAATTTTGCTATGGTGAAATTCTTATTGAGCTCCTTAGTGGAATTAACCATTTTTACAGTGCTGAGCTATCATGCGACAGTTATATATTCTAAAGCCTTTTTATTTCCACCACCTTTGTGTATCCATCGAGGGAAAATTTTGATGGATAGAATTTGCCATTCAGATTGCTCAGTGGTGGGTTTGTAATAGAGATGACAGGCCTTTATGGAGGAGGTGCTTCTAAATCCTCTTTTTAGTAGGCAAAGTTTTGCAGTAAACTAGTTTCTTTGTTATTTTGTGGAACATTTGGATTGAGAGAAAAAATAGATTTTTTAGATGGATCGAGAAATTTGGTGGGGATGTTTGAAAGGTGATTAAGATTAACGCTTCCTTGTGGGTGTCGGACACTATGCCTTGTATATATTTCATTTCGAAAGCACAATTTAAAAAAAAAAAACTGCCACTCGTTTTCAATATATTTCTTCTGGTTTCTTTTTCAATGCCGAGATTGGTGATCTGCAAATTTGGTGCATACAGGATGAAGAGAAGAATCGGAATAGTGTGATGCTTGATTTGCTTTATACACATTGTGCCCATCCACTGTCTGCACAGGTTTTCTCTTATTACCAAGTTGCTAGTCAACTACCTCCACGTGAAAGAACTTGTTGGGTGATTGACACGAATGCCAGGTAGGTTTAGTTTCACCATATATTCAATCAACTTCCTGATAATTTGTCCCTGTATGTGCTGGTTTGATCCCTTTGTTGCGTACATTTTACAGTGGTGGGATGAATGGATACCTCTGGTTGTGTGAGAGAAATGTATTCCGTAATGTTTTTCCATCACCAATCAGTAGTTTGCCAGATATCCAGCATAATCAAGTCCTGTAAGTCTTTCTTTCATTTGGTAACCTGAGACACACACAGGCCTCTTTCTCTCTCTCTCTCTCTCTTTCACTCACACATTTTATTTAACTGTAGGAATGTAACCTATCTTAATCCTCAGAAGCATGAACATGTCCCTAGACCTCCAAAGGGTGTAATCATTCCCAAAAAGGTGCGTCTGATATGAGTCCTAACGCCTCATTGAATTTCCTTTCAGTAATAACGTCTCTGAAATAAACGTGAAAAATATAAAGTAATTCATGTATGCGCTGTCATTGTGTGAGGAAATTTTTTATTAGCCTATTTCTAGTTTTAGGATGCCACGTTGTGATTCCCTTGCCACTATATTAGCTTAAAGTATTTAAAATTTGCCCATTGCTTGATGCTTTGTTGTATTTGCAGGTTCTAAGTTCCTTGGATATCAAACCTTTCCCTACCTTATGGCATGAAGACAATAATTCCCGGCGCTATCATGGCAGAGAACGGTTAGTTTACTTAAATTTGCCTCATCTTTACTGTATAAGGATAATCAAAATTTAAAGTTCTTAACAGACTTTGAAGAATCCACCCAGAATAGTTTTCAAGCTTGTTGTCACAATTATATGTAGTTTTAATTAGGACAGAATTTTGGGATGCTAGAGCCTTTCTATGAGCATCTCAACTTCTGGGAAGAATAGTTCTATTTTTTCATAATGCCCCTGTTTTTCAGGCCTCAAGTACCTAGAGCTATTGCTGGCCCTCTTTTGGGAGAAGCAGCTCATCGTCTTGTGAAAAACACTCTTAATATCAAACCTAATGGTGGCTCATCGTCGGGGTTATTTGATCAACCCTATTCTCGCAATTTCCCGGGACAGCCTATATTCTCTCGGCCGAGACAAGTTGGAAGTTCAGGTTATGAAACGGGGTATGGTGAAGATCCAAATTATTCCTACGGGCACTATAATAACTACCAGGGTGCATCAGGTAGGCCAAGATATCCCAACTCTTCAAATGGTATGCCAGGTGACAACAGGCAAACTTCCCGTGGAAATGATAGAGTACAGCATCAGGAGCGATACAACAATGTGAGGACTGGTATGTCTGCTCTGACAATTGAAGAGAGCATGAGGAATCGATCTCTCGACATGTTAACTCCTGGTCTTTCTCCCGTGATGATGCCAAAGATGCTGAACGTCGGAAACTCGGCAAACCAACAGAACTTTGCCCAGGCTACTGACGCTCTTCCTTCACCACCACACAAATGGATCAATAGAGCGCCAACGCCAACTGCAAATATAATGTATGCAAGACAACAAGAAAATTTTACAGGAGGAGCCAACGAGAAGCAAGCGAAACAAATGTATCTGGCAAAGACTCCAGCATTCCAGAGTGGGTCAGGTTCTGGAAGCAGGCAGTAA

mRNA sequence

ATGGGTGTCCCTGCCTTCTACAGGTGGCTTGCCGACCGGTACCCCCGGTCGATCGCCGATGTGGTCGAGGAAGAGCCAGTTGATGGCCCCAACGGGGTCGTCTTGCCGATCGACGTCTCCAAGCCTAACCCTAATGGAATGGAGTTTGACAACTTGTATTTGGATATGAATGGCATAATTCATCCGTGCTTTCATCCTGAAGGCAAGCTATTTATATCTTTCACAATCAATATATTGGTATCCATGGATGAAAAGTATCTGATTCAATATGCTGATCAGCAGGCACAAGAGAATAATGAAGAAATGAGAGGTAGAGCTAGAAGAGAAAATGGTCCTGCGCCCCCAGTTCCAACAATTGACAAGATCAAGTTAGGGGAGCCTGGATACAAGGAGAGGTATTATGCTGAGAAGTTCAATGCTAACTCAGAAAACATTGCTGAAATAAAACAAGATGTGGTCTTGAAGTATGTGGAGGGTTTATGTTGGGTCTGTCGATATTACTATTCAGGGGTTTGCTCTTGGCAATGGTATTATCCTTACCATTATTCACCTTTTGCCTCTGACCTTGAAAACTTGGCTGATTTGGAGATAACCTTTTTCCTCGGAGAGCCATTTAAACCTTTTGATCAACTGATGGGAACGCTACCAGCTGCAAGTTCAACCGCTCTTCCTGAGAAATACAGAAACTTGATGACCGATCATTCATCGCCAATCCTTGAATTTTATCCTTCAGATTTTGAGATTGACATGAATGGAAAGCGTTTTCAATGGCAGGGTGTTGCCAAATTGCCTTTCATTGACGAGAGAAAGTTGCTTGCTCAAACTAGGAGACTTGAAAGCGCTTTAACGGATGAAGAGAAGAATCGGAATAGTGTGATGCTTGATTTGCTTTATACACATTGTGCCCATCCACTGTCTGCACAGGTTTTCTCTTATTACCAAGTTGCTAGTCAACTACCTCCACGTGAAAGAACTTGTTGGGTGATTGACACGAATGCCAGTGGTGGGATGAATGGATACCTCTGGTTGTGTGAGAGAAATGTATTCCGTAATGTTTTTCCATCACCAATCAGTAGTTTGCCAGATATCCAGCATAATCAAGTCCTGAATGTAACCTATCTTAATCCTCAGAAGCATGAACATGTCCCTAGACCTCCAAAGGGTGTAATCATTCCCAAAAAGGTTCTAAGTTCCTTGGATATCAAACCTTTCCCTACCTTATGGCATGAAGACAATAATTCCCGGCGCTATCATGGCAGAGAACGGCCTCAAGTACCTAGAGCTATTGCTGGCCCTCTTTTGGGAGAAGCAGCTCATCGTCTTGTGAAAAACACTCTTAATATCAAACCTAATGGTGGCTCATCGTCGGGGTTATTTGATCAACCCTATTCTCGCAATTTCCCGGGACAGCCTATATTCTCTCGGCCGAGACAAGTTGGAAGTTCAGGTTATGAAACGGGGTATGGTGAAGATCCAAATTATTCCTACGGGCACTATAATAACTACCAGGGTGCATCAGGTAGGCCAAGATATCCCAACTCTTCAAATGGTATGCCAGGTGACAACAGGCAAACTTCCCGTGGAAATGATAGAGTACAGCATCAGGAGCGATACAACAATGTGAGGACTGGTATGTCTGCTCTGACAATTGAAGAGAGCATGAGGAATCGATCTCTCGACATGTTAACTCCTGGTCTTTCTCCCGTGATGATGCCAAAGATGCTGAACGTCGGAAACTCGGCAAACCAACAGAACTTTGCCCAGGCTACTGACGCTCTTCCTTCACCACCACACAAATGGATCAATAGAGCGCCAACGCCAACTGCAAATATAATGTATGCAAGACAACAAGAAAATTTTACAGGAGGAGCCAACGAGAAGCAAGCGAAACAAATGTATCTGGCAAAGACTCCAGCATTCCAGAGTGGGTCAGGTTCTGGAAGCAGGCAGTAA

Coding sequence (CDS)

ATGGGTGTCCCTGCCTTCTACAGGTGGCTTGCCGACCGGTACCCCCGGTCGATCGCCGATGTGGTCGAGGAAGAGCCAGTTGATGGCCCCAACGGGGTCGTCTTGCCGATCGACGTCTCCAAGCCTAACCCTAATGGAATGGAGTTTGACAACTTGTATTTGGATATGAATGGCATAATTCATCCGTGCTTTCATCCTGAAGGCAAGCTATTTATATCTTTCACAATCAATATATTGGTATCCATGGATGAAAAGTATCTGATTCAATATGCTGATCAGCAGGCACAAGAGAATAATGAAGAAATGAGAGGTAGAGCTAGAAGAGAAAATGGTCCTGCGCCCCCAGTTCCAACAATTGACAAGATCAAGTTAGGGGAGCCTGGATACAAGGAGAGGTATTATGCTGAGAAGTTCAATGCTAACTCAGAAAACATTGCTGAAATAAAACAAGATGTGGTCTTGAAGTATGTGGAGGGTTTATGTTGGGTCTGTCGATATTACTATTCAGGGGTTTGCTCTTGGCAATGGTATTATCCTTACCATTATTCACCTTTTGCCTCTGACCTTGAAAACTTGGCTGATTTGGAGATAACCTTTTTCCTCGGAGAGCCATTTAAACCTTTTGATCAACTGATGGGAACGCTACCAGCTGCAAGTTCAACCGCTCTTCCTGAGAAATACAGAAACTTGATGACCGATCATTCATCGCCAATCCTTGAATTTTATCCTTCAGATTTTGAGATTGACATGAATGGAAAGCGTTTTCAATGGCAGGGTGTTGCCAAATTGCCTTTCATTGACGAGAGAAAGTTGCTTGCTCAAACTAGGAGACTTGAAAGCGCTTTAACGGATGAAGAGAAGAATCGGAATAGTGTGATGCTTGATTTGCTTTATACACATTGTGCCCATCCACTGTCTGCACAGGTTTTCTCTTATTACCAAGTTGCTAGTCAACTACCTCCACGTGAAAGAACTTGTTGGGTGATTGACACGAATGCCAGTGGTGGGATGAATGGATACCTCTGGTTGTGTGAGAGAAATGTATTCCGTAATGTTTTTCCATCACCAATCAGTAGTTTGCCAGATATCCAGCATAATCAAGTCCTGAATGTAACCTATCTTAATCCTCAGAAGCATGAACATGTCCCTAGACCTCCAAAGGGTGTAATCATTCCCAAAAAGGTTCTAAGTTCCTTGGATATCAAACCTTTCCCTACCTTATGGCATGAAGACAATAATTCCCGGCGCTATCATGGCAGAGAACGGCCTCAAGTACCTAGAGCTATTGCTGGCCCTCTTTTGGGAGAAGCAGCTCATCGTCTTGTGAAAAACACTCTTAATATCAAACCTAATGGTGGCTCATCGTCGGGGTTATTTGATCAACCCTATTCTCGCAATTTCCCGGGACAGCCTATATTCTCTCGGCCGAGACAAGTTGGAAGTTCAGGTTATGAAACGGGGTATGGTGAAGATCCAAATTATTCCTACGGGCACTATAATAACTACCAGGGTGCATCAGGTAGGCCAAGATATCCCAACTCTTCAAATGGTATGCCAGGTGACAACAGGCAAACTTCCCGTGGAAATGATAGAGTACAGCATCAGGAGCGATACAACAATGTGAGGACTGGTATGTCTGCTCTGACAATTGAAGAGAGCATGAGGAATCGATCTCTCGACATGTTAACTCCTGGTCTTTCTCCCGTGATGATGCCAAAGATGCTGAACGTCGGAAACTCGGCAAACCAACAGAACTTTGCCCAGGCTACTGACGCTCTTCCTTCACCACCACACAAATGGATCAATAGAGCGCCAACGCCAACTGCAAATATAATGTATGCAAGACAACAAGAAAATTTTACAGGAGGAGCCAACGAGAAGCAAGCGAAACAAATGTATCTGGCAAAGACTCCAGCATTCCAGAGTGGGTCAGGTTCTGGAAGCAGGCAGTAA

Protein sequence

MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGIIHPCFHPEGKLFISFTINILVSMDEKYLIQYADQQAQENNEEMRGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESALTDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYLWLCERNVFRNVFPSPISSLPDIQHNQVLNVTYLNPQKHEHVPRPPKGVIIPKKVLSSLDIKPFPTLWHEDNNSRRYHGRERPQVPRAIAGPLLGEAAHRLVKNTLNIKPNGGSSSGLFDQPYSRNFPGQPIFSRPRQVGSSGYETGYGEDPNYSYGHYNNYQGASGRPRYPNSSNGMPGDNRQTSRGNDRVQHQERYNNVRTGMSALTIEESMRNRSLDMLTPGLSPVMMPKMLNVGNSANQQNFAQATDALPSPPHKWINRAPTPTANIMYARQQENFTGGANEKQAKQMYLAKTPAFQSGSGSGSRQ

Homology

[Close]

BLAST of Carg23431 vs. NCBI nr
Match: KAG7030287.1 (5'-3' exoribonuclease 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1343.6 bits (3476), Expect = 0.0e+00
Identity = 650/650 (100.00%), Postives = 650/650 (100.00%), Query Frame = 0


Query: 1   MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII 60
           MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII
Sbjct: 1   MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII 60

Query: 61  HPCFHPEGKLFISFTINILVSMDEKYLIQYADQQAQENNEEMRGRARRENGPAPPVPTID 120
           HPCFHPEGKLFISFTINILVSMDEKYLIQYADQQAQENNEEMRGRARRENGPAPPVPTID
Sbjct: 61  HPCFHPEGKLFISFTINILVSMDEKYLIQYADQQAQENNEEMRGRARRENGPAPPVPTID 120

Query: 121 KIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPY 180
           KIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPY
Sbjct: 121 KIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPY 180

Query: 181 HYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMTDHSSPILE 240
           HYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMTDHSSPILE
Sbjct: 181 HYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMTDHSSPILE 240

Query: 241 FYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESALTDEEKNRNSVMLDLLYTH 300
           FYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESALTDEEKNRNSVMLDLLYTH
Sbjct: 241 FYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESALTDEEKNRNSVMLDLLYTH 300

Query: 301 CAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYLWLCERNVFRNVFPSPISSL 360
           CAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYLWLCERNVFRNVFPSPISSL
Sbjct: 301 CAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYLWLCERNVFRNVFPSPISSL 360

Query: 361 PDIQHNQVLNVTYLNPQKHEHVPRPPKGVIIPKKVLSSLDIKPFPTLWHEDNNSRRYHGR 420
           PDIQHNQVLNVTYLNPQKHEHVPRPPKGVIIPKKVLSSLDIKPFPTLWHEDNNSRRYHGR
Sbjct: 361 PDIQHNQVLNVTYLNPQKHEHVPRPPKGVIIPKKVLSSLDIKPFPTLWHEDNNSRRYHGR 420

Query: 421 ERPQVPRAIAGPLLGEAAHRLVKNTLNIKPNGGSSSGLFDQPYSRNFPGQPIFSRPRQVG 480
           ERPQVPRAIAGPLLGEAAHRLVKNTLNIKPNGGSSSGLFDQPYSRNFPGQPIFSRPRQVG
Sbjct: 421 ERPQVPRAIAGPLLGEAAHRLVKNTLNIKPNGGSSSGLFDQPYSRNFPGQPIFSRPRQVG 480

Query: 481 SSGYETGYGEDPNYSYGHYNNYQGASGRPRYPNSSNGMPGDNRQTSRGNDRVQHQERYNN 540
           SSGYETGYGEDPNYSYGHYNNYQGASGRPRYPNSSNGMPGDNRQTSRGNDRVQHQERYNN
Sbjct: 481 SSGYETGYGEDPNYSYGHYNNYQGASGRPRYPNSSNGMPGDNRQTSRGNDRVQHQERYNN 540

Query: 541 VRTGMSALTIEESMRNRSLDMLTPGLSPVMMPKMLNVGNSANQQNFAQATDALPSPPHKW 600
           VRTGMSALTIEESMRNRSLDMLTPGLSPVMMPKMLNVGNSANQQNFAQATDALPSPPHKW
Sbjct: 541 VRTGMSALTIEESMRNRSLDMLTPGLSPVMMPKMLNVGNSANQQNFAQATDALPSPPHKW 600

Query: 601 INRAPTPTANIMYARQQENFTGGANEKQAKQMYLAKTPAFQSGSGSGSRQ 651
           INRAPTPTANIMYARQQENFTGGANEKQAKQMYLAKTPAFQSGSGSGSRQ
Sbjct: 601 INRAPTPTANIMYARQQENFTGGANEKQAKQMYLAKTPAFQSGSGSGSRQ 650

[Close]

BLAST of Carg23431 vs. NCBI nr
Match: KAG6599289.1 (5'-3' exoribonuclease 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1176.8 bits (3043), Expect = 0.0e+00
Identity = 635/968 (65.60%), Postives = 642/968 (66.32%), Query Frame = 0


Query: 1   MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII 60
           MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII
Sbjct: 1   MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII 60

Query: 61  HPCFHPEGK--------------------------------------------------- 120
           HPCFHPEGK                                                   
Sbjct: 61  HPCFHPEGKPPPATYDDVFKSIFDYIDHLFSLVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 RAAKDAAEAEAEEERLRKAFEADGQSLLPKEKPETCDSNVITPGTQFMAVLSVALQYYAH 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 SRLNHNPGWRFTKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 SLATHEIHFSILREVIMLPGQQEKCFNCGKVGHFAAECRGKSDGPEDWNAADETPIHKKK 300

Query: 301 -----------------------------------LFISF------------------TI 360
                                              +F+ F                   I
Sbjct: 301 YQFLNIWVLREYLQYELDIPNPPFEVDFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAI 360

Query: 361 NIL--------------------------------VSMDEKYLIQYAD--QQAQENNEEM 420
           N+L                                VS+ E+ + Q     QQAQENNEEM
Sbjct: 361 NLLMHIYRKEFPAMGGYLTDAGEVMLDKVEHFIQAVSVHEEQIFQKRARIQQAQENNEEM 420

Query: 421 RGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLCW 480
           RGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLCW
Sbjct: 421 RGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLCW 480

Query: 481 VCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASSTA 540
           VCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASSTA
Sbjct: 481 VCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASSTA 540

Query: 541 LPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESAL 600
           LPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLES+L
Sbjct: 541 LPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESSL 600

Query: 601 TDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYLW 651
           TDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYLW
Sbjct: 601 TDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYLW 660

[Close]

BLAST of Carg23431 vs. NCBI nr
Match: XP_022946604.1 (5'-3' exoribonuclease 4 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1170.6 bits (3027), Expect = 0.0e+00
Identity = 633/969 (65.33%), Postives = 641/969 (66.15%), Query Frame = 0


Query: 1   MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII 60
           MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII
Sbjct: 1   MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII 60

Query: 61  HPCFHPEGK--------------------------------------------------- 120
           HPCFHPEGK                                                   
Sbjct: 61  HPCFHPEGKPPPATYDDVFKSIFDYIDHLFSLVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 RAAKDAAEAEAEEERLRKAFEADGQSLLPKEKPETCDSNVITPGTQFMAVLSVALQYYAH 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 SRLNHNPGWRFTKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 SLATHEIHFSILREVIMLPGQQEKCFNCGKVGHFAAECRGKSDGPEDWNAADETPIHKKK 300

Query: 301 -----------------------------------LFISF------------------TI 360
                                              +F+ F                   I
Sbjct: 301 YQFLNIWVLREYLQYELDIPNPPFEVDFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAI 360

Query: 361 NIL--------------------------------VSMDEKYLIQ---YADQQAQENNEE 420
           N+L                                VS+ E+ + Q      QQAQENNEE
Sbjct: 361 NLLMHIYRKEFPAMGGYLTDAGEVMLDKVEHFIQAVSVHEEQIFQKRARIQQQAQENNEE 420

Query: 421 MRGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLC 480
           MRGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLC
Sbjct: 421 MRGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLC 480

Query: 481 WVCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASST 540
           WVCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASST
Sbjct: 481 WVCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASST 540

Query: 541 ALPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESA 600
           ALPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESA
Sbjct: 541 ALPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESA 600

Query: 601 LTDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYL 651
           LTDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYL
Sbjct: 601 LTDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYL 660

[Close]

BLAST of Carg23431 vs. NCBI nr
Match: XP_022946605.1 (5'-3' exoribonuclease 4 isoform X2 [Cucurbita moschata])

HSP 1 Score: 1170.2 bits (3026), Expect = 0.0e+00
Identity = 633/968 (65.39%), Postives = 641/968 (66.22%), Query Frame = 0


Query: 1   MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII 60
           MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII
Sbjct: 1   MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII 60

Query: 61  HPCFHPEGK--------------------------------------------------- 120
           HPCFHPEGK                                                   
Sbjct: 61  HPCFHPEGKPPPATYDDVFKSIFDYIDHLFSLVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 RAAKDAAEAEAEEERLRKAFEADGQSLLPKEKPETCDSNVITPGTQFMAVLSVALQYYAH 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 SRLNHNPGWRFTKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 SLATHEIHFSILREVIMLPGQQEKCFNCGKVGHFAAECRGKSDGPEDWNAADETPIHKKK 300

Query: 301 -----------------------------------LFISF------------------TI 360
                                              +F+ F                   I
Sbjct: 301 YQFLNIWVLREYLQYELDIPNPPFEVDFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAI 360

Query: 361 NIL--------------------------------VSMDEKYLIQYAD--QQAQENNEEM 420
           N+L                                VS+ E+ + Q     QQAQENNEEM
Sbjct: 361 NLLMHIYRKEFPAMGGYLTDAGEVMLDKVEHFIQAVSVHEEQIFQKRARIQQAQENNEEM 420

Query: 421 RGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLCW 480
           RGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLCW
Sbjct: 421 RGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLCW 480

Query: 481 VCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASSTA 540
           VCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASSTA
Sbjct: 481 VCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASSTA 540

Query: 541 LPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESAL 600
           LPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESAL
Sbjct: 541 LPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESAL 600

Query: 601 TDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYLW 651
           TDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYLW
Sbjct: 601 TDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYLW 660

[Close]

BLAST of Carg23431 vs. NCBI nr
Match: XP_022999254.1 (5'-3' exoribonuclease 4 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1159.1 bits (2997), Expect = 0.0e+00
Identity = 627/967 (64.84%), Postives = 637/967 (65.87%), Query Frame = 0


Query: 1   MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII 60
           MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII
Sbjct: 1   MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII 60

Query: 61  HPCFHPEGK--------------------------------------------------- 120
           HPCFHPEGK                                                   
Sbjct: 61  HPCFHPEGKPPPATYDDVFKSIFDYIDHLFSLVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 RAAKDAAEAEAEEERLRKAFEADGQSLLPMEKPETCDSNVITPGTQFMAVLSVALQYYAH 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 SRLNHNPGWRFTKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 SLATHEIHFSILREVIMLPGQQEKCFNCGKVGHFAAECRGKSDGPEDWNAADETPIHKKK 300

Query: 301 -----------------------------------LFISF------------------TI 360
                                              +F+ F                   I
Sbjct: 301 YQFLNIWVLREYLQYELDIPNPPFEVDFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAI 360

Query: 361 NIL--------------------------------VSMDEKYLIQYAD--QQAQENNEEM 420
           N+L                                VS+ E+ + Q     QQAQENNEEM
Sbjct: 361 NLLMHIYRKEFPAMGGYLTDAGEVMLDKVEHFIQAVSVHEEQIFQKRARIQQAQENNEEM 420

Query: 421 RGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLCW 480
           RGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLCW
Sbjct: 421 RGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLCW 480

Query: 481 VCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASSTA 540
           VCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFF+GEPFKPFDQLMGTLPAASSTA
Sbjct: 481 VCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFIGEPFKPFDQLMGTLPAASSTA 540

Query: 541 LPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESAL 600
           LPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLES+L
Sbjct: 541 LPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESSL 600

Query: 601 TDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYLW 650
           TDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYLW
Sbjct: 601 TDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYLW 660

[Close]

BLAST of Carg23431 vs. ExPASy Swiss-Prot
Match: Q9FQ04 (5'-3' exoribonuclease 4 OS=Arabidopsis thaliana OX=3702 GN=XRN4 PE=1 SV=1)

HSP 1 Score: 593.6 bits (1529), Expect = 2.7e-168
Identity = 372/970 (38.35%), Postives = 455/970 (46.91%), Query Frame = 0


Query: 1   MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII 60
           MGVPAFYRWLADRYP+SI+DVVEEEP DG  G ++P+D+++PNPNG EFDNLYLDMNGII
Sbjct: 1   MGVPAFYRWLADRYPKSISDVVEEEPTDGGRGDLIPVDITRPNPNGFEFDNLYLDMNGII 60

Query: 61  HPCFHPEGK--------------------------------------------------- 120
           HPCFHPEGK                                                   
Sbjct: 61  HPCFHPEGKPAPATYDDVFKSMFEYIDHLFTLVRPRKILYLAIDGVAPRAKMNQQRSRRF 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 RAAKDAAEAEAEEERLRKDFEMEGQILSAKEKAETCDSNVITPGTPFMAILSVALQYYIQ 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 SRLNHNPGWRYVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 SLATHEVHFSILREVITYPGQQEKCFVCGQTGHFASDCPGKSGSNNAAADIPIHKKKYQF 300

Query: 301 --------------------------------LFISF------------------TINIL 360
                                           +F+ F                   IN+L
Sbjct: 301 LNIWVLREYLQYELAIPDPPFMINFERIIDDFVFLCFFVGNDFLPHMPTLEIREGAINLL 360

Query: 361 VSMDEK-------YLIQYAD---------------------------QQAQENNEEMRGR 420
           + +  K       YL    +                           +Q+ +NNEEM+ R
Sbjct: 361 MHVYRKEFTAMGGYLTDSGEVLLDRVEHFIQAVAVNEDKIFQKRTRIKQSMDNNEEMKQR 420

Query: 421 ARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFN-ANSENIAEIKQDVVLKYVEGLCWVC 480
           +RR+    PP P  DKIKLGEPGYKERYYAEKF+  N E   +IKQD+VLKYVEGLCWVC
Sbjct: 421 SRRDPSEVPPEPIDDKIKLGEPGYKERYYAEKFSTTNPEETEQIKQDMVLKYVEGLCWVC 480

Query: 481 RYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASSTALP 540
           RYYY GVCSWQW+YPYHY+PFASDL+NL DLEITFF+GEPFKPFDQLMGTLPAASS ALP
Sbjct: 481 RYYYQGVCSWQWFYPYHYAPFASDLKNLPDLEITFFIGEPFKPFDQLMGTLPAASSNALP 540

Query: 541 EKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESALTD 600
            +YR LMTD SSPIL+FYP+DFE+DMNGKRF WQG+AKLPFI+E+ LLA TR+LE  LT 
Sbjct: 541 GEYRKLMTDPSSPILKFYPADFELDMNGKRFAWQGIAKLPFIEEKLLLAATRKLEETLTV 600

Query: 601 EEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYLWLC 645
           EE+ RNSVMLDLLY H AHPL  ++  YY     +PP E   W+ID N+S GMNG+LW  
Sbjct: 601 EEQQRNSVMLDLLYVHPAHPLGQRILQYYHFYQHMPPHECLPWMIDPNSSQGMNGFLWFS 660

[Close]

BLAST of Carg23431 vs. ExPASy Swiss-Prot
Match: Q9FQ03 (5'-3' exoribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=XRN3 PE=1 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.2e-102
Identity = 219/478 (45.82%), Postives = 278/478 (58.16%), Query Frame = 0


Query: 92  DQQAQENNEEMRGRAR---RENGPAPPVPTI--DKIKLGEPGYKERYYAEKFN-ANSENI 151
           +   +EN EE++ + +   RE   A    T   DK+KLG+PG++ERYY EKF+    E +
Sbjct: 496 ESDERENKEELKTKLKELIREKSDAFNSDTTEEDKVKLGQPGWRERYYEEKFSVVTPEEM 555

Query: 152 AEIKQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFLGEPF 211
             +++DVVLKY EGLCWV  YY  GVCSWQW+YPYHY+PFASDL++L +++I F LG PF
Sbjct: 556 ERVRKDVVLKYTEGLCWVMHYYMEGVCSWQWFYPYHYAPFASDLKDLGEMDIKFELGTPF 615

Query: 212 KPFDQLMGTLPAASSTALPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPF 271
           KPF+QL+G  PAASS ALPE+YR LMTD +SPI++FYP+DFE+DMNGKRF WQG+AKLPF
Sbjct: 616 KPFNQLLGVFPAASSHALPERYRTLMTDPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPF 675

Query: 272 IDERKLLAQTRRLESALTDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERT 331
           IDER+LL     +E  LTDEEK RNS M D+L+   +H L+  VFS      QL  RER 
Sbjct: 676 IDERRLLEAVSEVEFTLTDEEKRRNSRMCDMLFIATSHRLAELVFSLDNHCRQLSARERV 735

Query: 332 CW--VIDTNASGGMNGYLWLCERNVFRNVFPSPISSLPDIQHNQVLNVTYLNPQKHEHVP 391
            +   I    S GMNGYL  C       VF SP+  + DI  NQV+   Y  P  HEH+ 
Sbjct: 736 DFKVKIKPKLSDGMNGYLTPCSGETHPPVFRSPMEGMEDILTNQVICCIYRLPDAHEHIT 795

Query: 392 RPPKGVIIPKKVLSSLDIKPFPTLWHEDNNSRRYH---------------GRERPQVPRA 451
           RPP GVI PKK +   D+KP P LWHEDN  R  H               GR+ P  P +
Sbjct: 796 RPPPGVIFPKKTVDIGDLKPPPALWHEDNGRRPMHNNHGMHNNHGMHNNQGRQNP--PGS 855

Query: 452 IAGPLLGEAAHRLVKNTLNIKPNGGSSSGLFDQPYSRNFPGQPIFSRPRQVGSSGY---- 511
           ++G  LG AAHRLV N+L +  +   +      P     P Q +   P Q G  GY    
Sbjct: 856 VSGRHLGNAAHRLVSNSLQMGTDRYQTPTDVPAPGYGYNPPQYVPPIPYQHG--GYMAPP 915

Query: 512 -ETGYGEDPNYSYGHYNNYQGASGR-PRYPNSSNGMPGDNRQTS---RGNDRVQHQER 538
              GY +   Y        +G SGR P  P  S    G +        GN + QHQ++
Sbjct: 916 GAQGYAQPAPYQNRGGYQPRGPSGRFPSEPYQSQSREGQHASRGGGYSGNHQNQHQQQ 969

HSP 2 Score: 116.7 bits (291), Expect = 9.8e-25
Identity = 48/69 (69.57%), Postives = 60/69 (86.96%), Query Frame = 0


Query: 1  MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII 60
          MGVP+FYRWLA++YP  +ADV+EEEPV+   G+ +P+D SKPNPN +E+DNLYLDMNGII
Sbjct: 1  MGVPSFYRWLAEKYPLLVADVIEEEPVE-IEGIKIPVDTSKPNPNNLEYDNLYLDMNGII 60

Query: 61 HPCFHPEGK 70
          HPCFHPE +
Sbjct: 61 HPCFHPEDR 68

[Close]

BLAST of Carg23431 vs. ExPASy Swiss-Prot
Match: Q9FQ02 (5'-3' exoribonuclease 2 OS=Arabidopsis thaliana OX=3702 GN=XRN2 PE=1 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.2e-86
Identity = 160/341 (46.92%), Postives = 223/341 (65.40%), Query Frame = 0


Query: 120 DKIKLGEPGYKERYYAEKFNANS-ENIAEIKQDVVLKYVEGLCWVCRYYYSGVCSWQWYY 179
           DK+KL + G++ERYY EKF A S E + +I++DVVLKY EGLCW+  YYY GVCSW W+Y
Sbjct: 521 DKVKLNKVGWRERYYEEKFAAKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFY 580

Query: 180 PYHYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMTDHSSPI 239
           PYHY+PFASDL+ L  L+I F LG PFKPF+QL+  LP+AS+ ALPE YR+LMT+  SPI
Sbjct: 581 PYHYAPFASDLKGLEKLDIKFELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPDSPI 640

Query: 240 LEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESALTDEEKNRNSVMLDLLY 299
            +FYP+DFEIDMNGKR+ WQG++KLPF++E++LL    ++E +LT+EE  RNS + D+L+
Sbjct: 641 ADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFDMLF 700

Query: 300 THCAHPLSAQVFSYYQVASQLPPRERTCWV--IDTNASGGMNGYLWLCERNVFRNVFPSP 359
              +HPL   + S     + L   ER   +  ID   S GMNGY+  C  +   + F S 
Sbjct: 701 VVASHPLGELIRSLNSRTNNLSNEERATIIEKIDPGLSDGMNGYIASCGGDSQPSCFCST 760

Query: 360 ISSLPDIQHNQVLNVTYLNPQ--KHEHVPRPPKGVIIPKKVLSSLDIKPFPTLWHEDNNS 419
           +  + D+  NQV+   Y  P+  +   +      + IPKK +S +D+K    LWHED + 
Sbjct: 761 VEGMEDVLTNQVICAIYKLPEDIRGSEITHQIPRLAIPKKTISLVDLKSGGLLWHEDGDK 820

Query: 420 RRYHGR----ERPQVPRAIAGPLLGEAAHRLVKNTLNIKPN 452
           RR   +    +R     +I+G  LG+A+HRLV  T+N +P+
Sbjct: 821 RRAPPKVIKIKRYNPEGSISGGRLGKASHRLVLQTINAQPD 861

HSP 2 Score: 115.5 bits (288), Expect = 2.2e-24
Identity = 50/70 (71.43%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 1  MGVPAFYRWLADRYPRSIADVVEEEPVD-GPNGVVLPIDVSKPNPNGMEFDNLYLDMNGI 60
          MGVP+FYRWL  RYP +I +V+EEEP++    GV +PID SKPNPNG E+DNLYLDMNGI
Sbjct: 1  MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60

Query: 61 IHPCFHPEGK 70
          IHPCFHPE K
Sbjct: 61 IHPCFHPEDK 70

[Close]

BLAST of Carg23431 vs. ExPASy Swiss-Prot
Match: Q4P149 (5'-3' exoribonuclease 2 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=RAT1 PE=3 SV=3)

HSP 1 Score: 239.2 bits (609), Expect = 1.3e-61
Identity = 162/451 (35.92%), Postives = 233/451 (51.66%), Query Frame = 0


Query: 91   ADQQAQENNEEMRGRARRENGPAPPVPTI--------------DKIKLGEPGYKERYYAE 150
            A+   +E+N+E+ G     N    PV TI              D +K+ EPGY+ERYY E
Sbjct: 623  AEDDEEEDNDEVDG-----NEDVDPVTTIKKRKVNADGTVDYEDTVKMWEPGYRERYYKE 682

Query: 151  KFNANSENIAEIKQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFASDLENLADLE 210
            KF  +  +  + ++ VV  Y+EGLCWV  YYY GV SWQWYYP+H+SPFA+D E+L  L+
Sbjct: 683  KFGVDLSD-TDFRRSVVKSYIEGLCWVLAYYYQGVPSWQWYYPFHFSPFAADFEDLESLD 742

Query: 211  ITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQ 270
            I F LG PFKPF+QLMG LPA S  ++P  +  LMT+  S I++FYPS+FEIDMNGK+  
Sbjct: 743  IQFQLGSPFKPFEQLMGVLPADSRASIPPAFHPLMTESDSDIIDFYPSEFEIDMNGKKMA 802

Query: 271  WQGVAKLPFIDERKLLAQTRRLESALTDEEKNRNSVMLDLLY----THCAHPLSAQVFSY 330
            WQGVA LPFIDE++LL   +     L+++E  RN    + L+    +     L  ++++ 
Sbjct: 803  WQGVALLPFIDEKRLLDALKERYPLLSEDEVRRNGFGNNTLFVGNESRLYDFLCEEIYAK 862

Query: 331  YQVASQLPPRERTCWVIDTNASGGMNGYLWLCERNVFRNVFPSPISS--LPDIQHNQVLN 390
             +        +R    ++   SGG+ G++      V  + F SP++S  L DI +++ ++
Sbjct: 863  KRTTDDGETPKRV--AVNPALSGGITGFVKPDPVCVPGSTFNSPLTSQALHDIHNDRSIS 922

Query: 391  VTYLNP-QKHEHVPRPPKGVIIPKKVLSSLDIKPFPTLWHEDNNSR-----RYHGRERPQ 450
            V Y  P QK  H     KG+  PK++LS+ +I  +      DN  R      +HG     
Sbjct: 923  VLYDFPEQKTPHRSVLLKGLKPPKRILSAAEI-DWVKRGSPDNRGRGRGRGAHHGGAGRD 982

Query: 451  VPRA----------IAGPLLGEAAHRLVKNTLNIKPNGGSSSGLFDQPYSRNFPGQPIFS 506
              R+           AG   G A +R          NGG   G +  P  R+      + 
Sbjct: 983  FHRSSNGQQHNNNGYAGGENGSAGYRGSNGGGYGSHNGGGGGG-YGAPVGRSHD----YQ 1042

HSP 2 Score: 104.0 bits (258), Expect = 6.6e-21
Identity = 46/73 (63.01%), Postives = 56/73 (76.71%), Query Frame = 0


Query: 1  MGVPAFYRWLADRYPRSIADVVEEEP--VDGPNG--VVLPIDVSKPNPNGMEFDNLYLDM 60
          MGVPA +RWL+ +YPR ++ V EE+P    GP+G  + LP+D S PNPNG EFD LYLDM
Sbjct: 1  MGVPALFRWLSKKYPRIVSSVQEEDPKTAPGPDGTEITLPLDTSTPNPNGEEFDCLYLDM 60

Query: 61 NGIIHPCFHPEGK 70
          NGI+HPC HPEGK
Sbjct: 61 NGIVHPCTHPEGK 73

[Close]

BLAST of Carg23431 vs. ExPASy Swiss-Prot
Match: Q5R4L5 (5'-3' exoribonuclease 2 OS=Pongo abelii OX=9601 GN=XRN2 PE=2 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 3.2e-60
Identity = 127/315 (40.32%), Postives = 184/315 (58.41%), Query Frame = 0


Query: 105 RARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLCWVC 164
           + + E+  + P P  D ++L E G+K+RYY  KF+A++ +  + ++ VV  YVEGLCWV 
Sbjct: 493 KRKAEDSDSEPEPE-DNVRLWEAGWKQRYYKNKFDADAAD-EKFRRKVVQSYVEGLCWVL 552

Query: 165 RYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFLG-EPFKPFDQLMGTLPAASSTAL 224
           RYYY G  SW+WYYP+HY+PFASD E +AD+   F  G +PFKP +QLMG  PAAS   L
Sbjct: 553 RYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMGVFPAASGNFL 612

Query: 225 PEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESALT 284
           P  +R LM+D  S I++FYP DF ID+NGK++ WQGVA LPF+DER+L A    +   LT
Sbjct: 613 PPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLT 672

Query: 285 DEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYLWL 344
            EE  RNS+  D+L+    HPL   +   YQ  S  P        +      G+ G   L
Sbjct: 673 PEETRRNSLGGDVLFVGKHHPLHDFILELYQTGSTEPVD------VPPELCHGIQGKFSL 732

Query: 345 CERNVFRN-VFPSPISSLPDIQHNQVLNVTYLNPQKHEHVPRPPKGVIIPKKVLSSLDIK 404
            E  +  + +  SP+  L D+  N V+++ + +PQ  E      K V++P     +  +K
Sbjct: 733 DEEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIF--KAVMLPGARKPAAVLK 792

Query: 405 PFPTLWHEDNNSRRY 418
             P+ W + +N R++
Sbjct: 793 --PSDWEKSSNGRQW 795

HSP 2 Score: 106.7 bits (265), Expect = 1.0e-21
Identity = 47/69 (68.12%), Postives = 56/69 (81.16%), Query Frame = 0


Query: 1  MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII 60
          MGVPAF+RWL+ +YP  I + VEE+P +  NGV +P+D SKPNPN +EFDNLYLDMNGII
Sbjct: 1  MGVPAFFRWLSRKYPSIIVNCVEEKPKE-CNGVKIPVDASKPNPNDVEFDNLYLDMNGII 60

Query: 61 HPCFHPEGK 70
          HPC HPE K
Sbjct: 61 HPCTHPEDK 68

[Close]

BLAST of Carg23431 vs. ExPASy TrEMBL
Match: A0A6J1G4A4 (5'-3' exoribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111450621 PE=3 SV=1)

HSP 1 Score: 1170.6 bits (3027), Expect = 0.0e+00
Identity = 633/969 (65.33%), Postives = 641/969 (66.15%), Query Frame = 0


Query: 1   MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII 60
           MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII
Sbjct: 1   MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII 60

Query: 61  HPCFHPEGK--------------------------------------------------- 120
           HPCFHPEGK                                                   
Sbjct: 61  HPCFHPEGKPPPATYDDVFKSIFDYIDHLFSLVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 RAAKDAAEAEAEEERLRKAFEADGQSLLPKEKPETCDSNVITPGTQFMAVLSVALQYYAH 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 SRLNHNPGWRFTKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 SLATHEIHFSILREVIMLPGQQEKCFNCGKVGHFAAECRGKSDGPEDWNAADETPIHKKK 300

Query: 301 -----------------------------------LFISF------------------TI 360
                                              +F+ F                   I
Sbjct: 301 YQFLNIWVLREYLQYELDIPNPPFEVDFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAI 360

Query: 361 NIL--------------------------------VSMDEKYLIQ---YADQQAQENNEE 420
           N+L                                VS+ E+ + Q      QQAQENNEE
Sbjct: 361 NLLMHIYRKEFPAMGGYLTDAGEVMLDKVEHFIQAVSVHEEQIFQKRARIQQQAQENNEE 420

Query: 421 MRGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLC 480
           MRGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLC
Sbjct: 421 MRGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLC 480

Query: 481 WVCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASST 540
           WVCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASST
Sbjct: 481 WVCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASST 540

Query: 541 ALPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESA 600
           ALPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESA
Sbjct: 541 ALPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESA 600

Query: 601 LTDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYL 651
           LTDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYL
Sbjct: 601 LTDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYL 660

[Close]

BLAST of Carg23431 vs. ExPASy TrEMBL
Match: A0A6J1G4D0 (5'-3' exoribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111450621 PE=3 SV=1)

HSP 1 Score: 1170.2 bits (3026), Expect = 0.0e+00
Identity = 633/968 (65.39%), Postives = 641/968 (66.22%), Query Frame = 0


Query: 1   MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII 60
           MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII
Sbjct: 1   MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII 60

Query: 61  HPCFHPEGK--------------------------------------------------- 120
           HPCFHPEGK                                                   
Sbjct: 61  HPCFHPEGKPPPATYDDVFKSIFDYIDHLFSLVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 RAAKDAAEAEAEEERLRKAFEADGQSLLPKEKPETCDSNVITPGTQFMAVLSVALQYYAH 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 SRLNHNPGWRFTKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 SLATHEIHFSILREVIMLPGQQEKCFNCGKVGHFAAECRGKSDGPEDWNAADETPIHKKK 300

Query: 301 -----------------------------------LFISF------------------TI 360
                                              +F+ F                   I
Sbjct: 301 YQFLNIWVLREYLQYELDIPNPPFEVDFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAI 360

Query: 361 NIL--------------------------------VSMDEKYLIQYAD--QQAQENNEEM 420
           N+L                                VS+ E+ + Q     QQAQENNEEM
Sbjct: 361 NLLMHIYRKEFPAMGGYLTDAGEVMLDKVEHFIQAVSVHEEQIFQKRARIQQAQENNEEM 420

Query: 421 RGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLCW 480
           RGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLCW
Sbjct: 421 RGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLCW 480

Query: 481 VCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASSTA 540
           VCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASSTA
Sbjct: 481 VCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASSTA 540

Query: 541 LPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESAL 600
           LPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESAL
Sbjct: 541 LPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESAL 600

Query: 601 TDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYLW 651
           TDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYLW
Sbjct: 601 TDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYLW 660

[Close]

BLAST of Carg23431 vs. ExPASy TrEMBL
Match: A0A6J1KGI7 (5'-3' exoribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111493680 PE=3 SV=1)

HSP 1 Score: 1159.1 bits (2997), Expect = 0.0e+00
Identity = 627/967 (64.84%), Postives = 637/967 (65.87%), Query Frame = 0


Query: 1   MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII 60
           MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII
Sbjct: 1   MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII 60

Query: 61  HPCFHPEGK--------------------------------------------------- 120
           HPCFHPEGK                                                   
Sbjct: 61  HPCFHPEGKPPPATYDDVFKSIFDYIDHLFSLVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 RAAKDAAEAEAEEERLRKAFEADGQSLLPMEKPETCDSNVITPGTQFMAVLSVALQYYAH 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 SRLNHNPGWRFTKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 SLATHEIHFSILREVIMLPGQQEKCFNCGKVGHFAAECRGKSDGPEDWNAADETPIHKKK 300

Query: 301 -----------------------------------LFISF------------------TI 360
                                              +F+ F                   I
Sbjct: 301 YQFLNIWVLREYLQYELDIPNPPFEVDFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAI 360

Query: 361 NIL--------------------------------VSMDEKYLIQYAD--QQAQENNEEM 420
           N+L                                VS+ E+ + Q     QQAQENNEEM
Sbjct: 361 NLLMHIYRKEFPAMGGYLTDAGEVMLDKVEHFIQAVSVHEEQIFQKRARIQQAQENNEEM 420

Query: 421 RGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLCW 480
           RGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLCW
Sbjct: 421 RGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFNANSENIAEIKQDVVLKYVEGLCW 480

Query: 481 VCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASSTA 540
           VCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFF+GEPFKPFDQLMGTLPAASSTA
Sbjct: 481 VCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFIGEPFKPFDQLMGTLPAASSTA 540

Query: 541 LPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESAL 600
           LPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLES+L
Sbjct: 541 LPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESSL 600

Query: 601 TDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYLW 650
           TDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYLW
Sbjct: 601 TDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYLW 660

[Close]

BLAST of Carg23431 vs. ExPASy TrEMBL
Match: A0A6J1G444 (5'-3' exoribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111450621 PE=3 SV=1)

HSP 1 Score: 1143.3 bits (2956), Expect = 0.0e+00
Identity = 559/574 (97.39%), Postives = 564/574 (98.26%), Query Frame = 0


Query: 80  VSMDEKYLIQ---YADQQAQENNEEMRGRARRENGPAPPVPTIDKIKLGEPGYKERYYAE 139
           VS+ E+ + Q      QQAQENNEEMRGRARRENGPAPPVPTIDKIKLGEPGYKERYYAE
Sbjct: 216 VSVHEEQIFQKRARIQQQAQENNEEMRGRARRENGPAPPVPTIDKIKLGEPGYKERYYAE 275

Query: 140 KFNANSENIAEIKQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFASDLENLADLE 199
           KFNANSENIAEIKQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFASDLENLADLE
Sbjct: 276 KFNANSENIAEIKQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFASDLENLADLE 335

Query: 200 ITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQ 259
           ITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQ
Sbjct: 336 ITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQ 395

Query: 260 WQGVAKLPFIDERKLLAQTRRLESALTDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVA 319
           WQGVAKLPFIDERKLLAQTRRLESALTDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVA
Sbjct: 396 WQGVAKLPFIDERKLLAQTRRLESALTDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVA 455

Query: 320 SQLPPRERTCWVIDTNASGGMNGYLWLCERNVFRNVFPSPISSLPDIQHNQVLNVTYLNP 379
           SQLPPRERTCWVIDTNASGGMNGYLWLCERNVFRNVFPSPISSLPDIQHNQVLNVTYLNP
Sbjct: 456 SQLPPRERTCWVIDTNASGGMNGYLWLCERNVFRNVFPSPISSLPDIQHNQVLNVTYLNP 515

Query: 380 QKHEHVPRPPKGVIIPKKVLSSLDIKPFPTLWHEDNNSRRYHGRERPQVPRAIAGPLLGE 439
           QKHEHVPRPPKGVIIPKKVLSSLDIKPFPTLWHEDNNSRRYHGRERPQVPRAIAGPLLGE
Sbjct: 516 QKHEHVPRPPKGVIIPKKVLSSLDIKPFPTLWHEDNNSRRYHGRERPQVPRAIAGPLLGE 575

Query: 440 AAHRLVKNTLNIKPNGGSSSGLFDQPYSRNFPGQPIFSRPRQVGSSGYETGYGEDPNYSY 499
           AAHRLVKNTLNIKPNGGSSSGLFDQPYSRNFPGQPIFSRPRQVGSSGYETGYGEDPNYSY
Sbjct: 576 AAHRLVKNTLNIKPNGGSSSGLFDQPYSRNFPGQPIFSRPRQVGSSGYETGYGEDPNYSY 635

Query: 500 GHYNNYQGASGRPRYPNSSNGMPGDNRQTSRGNDRVQHQERYNNVRTGMSALTIEESMRN 559
           GHYNNYQGASGRPRYPNSSNGMPGDNRQTSRGND +QHQERYNNVRTGMSALTIEESMRN
Sbjct: 636 GHYNNYQGASGRPRYPNSSNGMPGDNRQTSRGND-IQHQERYNNVRTGMSALTIEESMRN 695

Query: 560 RSLDMLTPGLSPVMMPKMLNVGNSANQQNFAQATDALPSPPHKWINRAPTPTANIMYARQ 619
           RSLDMLTPGLSP+MMPKMLNVGNSANQQNFAQATDALPSPPHKWINRAPTPTANIMYARQ
Sbjct: 696 RSLDMLTPGLSPMMMPKMLNVGNSANQQNFAQATDALPSPPHKWINRAPTPTANIMYARQ 755

Query: 620 QENFTGGANEKQAKQMYLAKTPAFQSGSGSGSRQ 651
           QENFTGGANEKQAKQMYLAKTPAFQSGSGSGSRQ
Sbjct: 756 QENFTGGANEKQAKQMYLAKTPAFQSGSGSGSRQ 788

[Close]

BLAST of Carg23431 vs. ExPASy TrEMBL
Match: A0A6J1KEW9 (5'-3' exoribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111493680 PE=3 SV=1)

HSP 1 Score: 1131.7 bits (2926), Expect = 0.0e+00
Identity = 553/572 (96.68%), Postives = 560/572 (97.90%), Query Frame = 0


Query: 80  VSMDEKYLIQYAD--QQAQENNEEMRGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEK 139
           VS+ E+ + Q     QQAQENNEEMRGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEK
Sbjct: 216 VSVHEEQIFQKRARIQQAQENNEEMRGRARRENGPAPPVPTIDKIKLGEPGYKERYYAEK 275

Query: 140 FNANSENIAEIKQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEI 199
           FNANSENIAEIKQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEI
Sbjct: 276 FNANSENIAEIKQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEI 335

Query: 200 TFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQW 259
           TFF+GEPFKPFDQLMGTLPAASSTALPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQW
Sbjct: 336 TFFIGEPFKPFDQLMGTLPAASSTALPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQW 395

Query: 260 QGVAKLPFIDERKLLAQTRRLESALTDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVAS 319
           QGVAKLPFIDERKLLAQTRRLES+LTDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVAS
Sbjct: 396 QGVAKLPFIDERKLLAQTRRLESSLTDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVAS 455

Query: 320 QLPPRERTCWVIDTNASGGMNGYLWLCERNVFRNVFPSPISSLPDIQHNQVLNVTYLNPQ 379
           QLPPRERTCWVIDTNASGGMNGYLWLCERNVFRNVFPSPISSLPDIQHNQVLNVTYLNPQ
Sbjct: 456 QLPPRERTCWVIDTNASGGMNGYLWLCERNVFRNVFPSPISSLPDIQHNQVLNVTYLNPQ 515

Query: 380 KHEHVPRPPKGVIIPKKVLSSLDIKPFPTLWHEDNNSRRYHGRERPQVPRAIAGPLLGEA 439
           KHEH+PRPPKGVIIPKKVLSSLDIKPFPTLWHEDNNSRRYHGRERPQVPRAIAGPLLGEA
Sbjct: 516 KHEHIPRPPKGVIIPKKVLSSLDIKPFPTLWHEDNNSRRYHGRERPQVPRAIAGPLLGEA 575

Query: 440 AHRLVKNTLNIKPNGGSSSGLFDQPYSRNFPGQPIFSRPRQVGSSGYETGYGEDPNYSYG 499
           AHRLVKNTLNIKPNGGS SGLFDQPYSRNFPGQPIFSRPRQV SSGYETGYGEDPNYSYG
Sbjct: 576 AHRLVKNTLNIKPNGGSLSGLFDQPYSRNFPGQPIFSRPRQVASSGYETGYGEDPNYSYG 635

Query: 500 HYNNYQGASGRPRYPNSSNGMPGDNRQTSRGNDRVQHQERYNNVRTGMSALTIEESMRNR 559
           HYNNYQGASGRPRYPNSSNGMPGD RQ SRGNDRVQHQERYNNVRTGMSALTIEESMRNR
Sbjct: 636 HYNNYQGASGRPRYPNSSNGMPGD-RQISRGNDRVQHQERYNNVRTGMSALTIEESMRNR 695

Query: 560 SLDMLTPGLSPVMMPKMLNVGNSANQQNFAQATDALPSPPHKWINRAPTPTANIMYARQQ 619
           SLDMLTPGLSPVMMPKMLNVGNSANQQNFAQATDALPSPPHKWINRAPTP+ANIMYARQQ
Sbjct: 696 SLDMLTPGLSPVMMPKMLNVGNSANQQNFAQATDALPSPPHKWINRAPTPSANIMYARQQ 755

Query: 620 ENFTGGANEKQAKQMYLAKTPAFQSGSGSGSR 650
           ENFTGGANEKQAKQMYLAKTPAFQSGSGSGSR
Sbjct: 756 ENFTGGANEKQAKQMYLAKTPAFQSGSGSGSR 786

[Close]

BLAST of Carg23431 vs. TAIR 10
Match: AT1G54490.1 (exoribonuclease 4 )

HSP 1 Score: 593.6 bits (1529), Expect = 1.9e-169
Identity = 372/970 (38.35%), Postives = 455/970 (46.91%), Query Frame = 0


Query: 1   MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII 60
           MGVPAFYRWLADRYP+SI+DVVEEEP DG  G ++P+D+++PNPNG EFDNLYLDMNGII
Sbjct: 1   MGVPAFYRWLADRYPKSISDVVEEEPTDGGRGDLIPVDITRPNPNGFEFDNLYLDMNGII 60

Query: 61  HPCFHPEGK--------------------------------------------------- 120
           HPCFHPEGK                                                   
Sbjct: 61  HPCFHPEGKPAPATYDDVFKSMFEYIDHLFTLVRPRKILYLAIDGVAPRAKMNQQRSRRF 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 RAAKDAAEAEAEEERLRKDFEMEGQILSAKEKAETCDSNVITPGTPFMAILSVALQYYIQ 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 SRLNHNPGWRYVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 SLATHEVHFSILREVITYPGQQEKCFVCGQTGHFASDCPGKSGSNNAAADIPIHKKKYQF 300

Query: 301 --------------------------------LFISF------------------TINIL 360
                                           +F+ F                   IN+L
Sbjct: 301 LNIWVLREYLQYELAIPDPPFMINFERIIDDFVFLCFFVGNDFLPHMPTLEIREGAINLL 360

Query: 361 VSMDEK-------YLIQYAD---------------------------QQAQENNEEMRGR 420
           + +  K       YL    +                           +Q+ +NNEEM+ R
Sbjct: 361 MHVYRKEFTAMGGYLTDSGEVLLDRVEHFIQAVAVNEDKIFQKRTRIKQSMDNNEEMKQR 420

Query: 421 ARRENGPAPPVPTIDKIKLGEPGYKERYYAEKFN-ANSENIAEIKQDVVLKYVEGLCWVC 480
           +RR+    PP P  DKIKLGEPGYKERYYAEKF+  N E   +IKQD+VLKYVEGLCWVC
Sbjct: 421 SRRDPSEVPPEPIDDKIKLGEPGYKERYYAEKFSTTNPEETEQIKQDMVLKYVEGLCWVC 480

Query: 481 RYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASSTALP 540
           RYYY GVCSWQW+YPYHY+PFASDL+NL DLEITFF+GEPFKPFDQLMGTLPAASS ALP
Sbjct: 481 RYYYQGVCSWQWFYPYHYAPFASDLKNLPDLEITFFIGEPFKPFDQLMGTLPAASSNALP 540

Query: 541 EKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESALTD 600
            +YR LMTD SSPIL+FYP+DFE+DMNGKRF WQG+AKLPFI+E+ LLA TR+LE  LT 
Sbjct: 541 GEYRKLMTDPSSPILKFYPADFELDMNGKRFAWQGIAKLPFIEEKLLLAATRKLEETLTV 600

Query: 601 EEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERTCWVIDTNASGGMNGYLWLC 645
           EE+ RNSVMLDLLY H AHPL  ++  YY     +PP E   W+ID N+S GMNG+LW  
Sbjct: 601 EEQQRNSVMLDLLYVHPAHPLGQRILQYYHFYQHMPPHECLPWMIDPNSSQGMNGFLWFS 660

[Close]

BLAST of Carg23431 vs. TAIR 10
Match: AT1G75660.1 (5'-3' exoribonuclease 3 )

HSP 1 Score: 375.6 bits (963), Expect = 8.3e-104
Identity = 219/478 (45.82%), Postives = 278/478 (58.16%), Query Frame = 0


Query: 92  DQQAQENNEEMRGRAR---RENGPAPPVPTI--DKIKLGEPGYKERYYAEKFN-ANSENI 151
           +   +EN EE++ + +   RE   A    T   DK+KLG+PG++ERYY EKF+    E +
Sbjct: 496 ESDERENKEELKTKLKELIREKSDAFNSDTTEEDKVKLGQPGWRERYYEEKFSVVTPEEM 555

Query: 152 AEIKQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFASDLENLADLEITFFLGEPF 211
             +++DVVLKY EGLCWV  YY  GVCSWQW+YPYHY+PFASDL++L +++I F LG PF
Sbjct: 556 ERVRKDVVLKYTEGLCWVMHYYMEGVCSWQWFYPYHYAPFASDLKDLGEMDIKFELGTPF 615

Query: 212 KPFDQLMGTLPAASSTALPEKYRNLMTDHSSPILEFYPSDFEIDMNGKRFQWQGVAKLPF 271
           KPF+QL+G  PAASS ALPE+YR LMTD +SPI++FYP+DFE+DMNGKRF WQG+AKLPF
Sbjct: 616 KPFNQLLGVFPAASSHALPERYRTLMTDPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPF 675

Query: 272 IDERKLLAQTRRLESALTDEEKNRNSVMLDLLYTHCAHPLSAQVFSYYQVASQLPPRERT 331
           IDER+LL     +E  LTDEEK RNS M D+L+   +H L+  VFS      QL  RER 
Sbjct: 676 IDERRLLEAVSEVEFTLTDEEKRRNSRMCDMLFIATSHRLAELVFSLDNHCRQLSARERV 735

Query: 332 CW--VIDTNASGGMNGYLWLCERNVFRNVFPSPISSLPDIQHNQVLNVTYLNPQKHEHVP 391
            +   I    S GMNGYL  C       VF SP+  + DI  NQV+   Y  P  HEH+ 
Sbjct: 736 DFKVKIKPKLSDGMNGYLTPCSGETHPPVFRSPMEGMEDILTNQVICCIYRLPDAHEHIT 795

Query: 392 RPPKGVIIPKKVLSSLDIKPFPTLWHEDNNSRRYH---------------GRERPQVPRA 451
           RPP GVI PKK +   D+KP P LWHEDN  R  H               GR+ P  P +
Sbjct: 796 RPPPGVIFPKKTVDIGDLKPPPALWHEDNGRRPMHNNHGMHNNHGMHNNQGRQNP--PGS 855

Query: 452 IAGPLLGEAAHRLVKNTLNIKPNGGSSSGLFDQPYSRNFPGQPIFSRPRQVGSSGY---- 511
           ++G  LG AAHRLV N+L +  +   +      P     P Q +   P Q G  GY    
Sbjct: 856 VSGRHLGNAAHRLVSNSLQMGTDRYQTPTDVPAPGYGYNPPQYVPPIPYQHG--GYMAPP 915

Query: 512 -ETGYGEDPNYSYGHYNNYQGASGR-PRYPNSSNGMPGDNRQTS---RGNDRVQHQER 538
              GY +   Y        +G SGR P  P  S    G +        GN + QHQ++
Sbjct: 916 GAQGYAQPAPYQNRGGYQPRGPSGRFPSEPYQSQSREGQHASRGGGYSGNHQNQHQQQ 969

HSP 2 Score: 116.7 bits (291), Expect = 7.0e-26
Identity = 48/69 (69.57%), Postives = 60/69 (86.96%), Query Frame = 0


Query: 1  MGVPAFYRWLADRYPRSIADVVEEEPVDGPNGVVLPIDVSKPNPNGMEFDNLYLDMNGII 60
          MGVP+FYRWLA++YP  +ADV+EEEPV+   G+ +P+D SKPNPN +E+DNLYLDMNGII
Sbjct: 1  MGVPSFYRWLAEKYPLLVADVIEEEPVE-IEGIKIPVDTSKPNPNNLEYDNLYLDMNGII 60

Query: 61 HPCFHPEGK 70
          HPCFHPE +
Sbjct: 61 HPCFHPEDR 68

[Close]

BLAST of Carg23431 vs. TAIR 10
Match: AT5G42540.1 (exoribonuclease 2 )

HSP 1 Score: 322.4 bits (825), Expect = 8.4e-88
Identity = 160/341 (46.92%), Postives = 223/341 (65.40%), Query Frame = 0


Query: 120 DKIKLGEPGYKERYYAEKFNANS-ENIAEIKQDVVLKYVEGLCWVCRYYYSGVCSWQWYY 179
           DK+KL + G++ERYY EKF A S E + +I++DVVLKY EGLCW+  YYY GVCSW W+Y
Sbjct: 521 DKVKLNKVGWRERYYEEKFAAKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFY 580

Query: 180 PYHYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMTDHSSPI 239
           PYHY+PFASDL+ L  L+I F LG PFKPF+QL+  LP+AS+ ALPE YR+LMT+  SPI
Sbjct: 581 PYHYAPFASDLKGLEKLDIKFELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPDSPI 640

Query: 240 LEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESALTDEEKNRNSVMLDLLY 299
            +FYP+DFEIDMNGKR+ WQG++KLPF++E++LL    ++E +LT+EE  RNS + D+L+
Sbjct: 641 ADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFDMLF 700

Query: 300 THCAHPLSAQVFSYYQVASQLPPRERTCWV--IDTNASGGMNGYLWLCERNVFRNVFPSP 359
              +HPL   + S     + L   ER   +  ID   S GMNGY+  C  +   + F S 
Sbjct: 701 VVASHPLGELIRSLNSRTNNLSNEERATIIEKIDPGLSDGMNGYIASCGGDSQPSCFCST 760

Query: 360 ISSLPDIQHNQVLNVTYLNPQ--KHEHVPRPPKGVIIPKKVLSSLDIKPFPTLWHEDNNS 419
           +  + D+  NQV+   Y  P+  +   +      + IPKK +S +D+K    LWHED + 
Sbjct: 761 VEGMEDVLTNQVICAIYKLPEDIRGSEITHQIPRLAIPKKTISLVDLKSGGLLWHEDGDK 820

Query: 420 RRYHGR----ERPQVPRAIAGPLLGEAAHRLVKNTLNIKPN 452
           RR   +    +R     +I+G  LG+A+HRLV  T+N +P+
Sbjct: 821 RRAPPKVIKIKRYNPEGSISGGRLGKASHRLVLQTINAQPD 861

HSP 2 Score: 115.5 bits (288), Expect = 1.6e-25
Identity = 50/70 (71.43%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 1  MGVPAFYRWLADRYPRSIADVVEEEPVD-GPNGVVLPIDVSKPNPNGMEFDNLYLDMNGI 60
          MGVP+FYRWL  RYP +I +V+EEEP++    GV +PID SKPNPNG E+DNLYLDMNGI
Sbjct: 1  MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60

Query: 61 IHPCFHPEGK 70
          IHPCFHPE K
Sbjct: 61 IHPCFHPEDK 70

[Close]

BLAST of Carg23431 vs. TAIR 10
Match: AT5G42540.2 (exoribonuclease 2 )

HSP 1 Score: 314.3 bits (804), Expect = 2.3e-85
Identity = 160/352 (45.45%), Postives = 223/352 (63.35%), Query Frame = 0


Query: 120 DKIKLGEPGYKERYYAEKFNANS-ENIAEIKQDVVLKYVEGLCWVCRYYYSGVCSWQWYY 179
           DK+KL + G++ERYY EKF A S E + +I++DVVLKY EGLCW+  YYY GVCSW W+Y
Sbjct: 521 DKVKLNKVGWRERYYEEKFAAKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFY 580

Query: 180 PYHYSPFASDLENLADLEITFFLGEPFKPFDQLMGTLPAASSTALPEKYRNLMTDHSSPI 239
           PYHY+PFASDL+ L  L+I F LG PFKPF+QL+  LP+AS+ ALPE YR+LMT+  SPI
Sbjct: 581 PYHYAPFASDLKGLEKLDIKFELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPDSPI 640

Query: 240 LEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKLLAQTRRLESALTDEEKNRNSVMLDLLY 299
            +FYP+DFEIDMNGKR+ WQG++KLPF++E++LL    ++E +LT+EE  RNS + D+L+
Sbjct: 641 ADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFDMLF 700

Query: 300 THCAHPLSAQVFSYYQVASQLPPRERTCWV--IDTN-----------ASGGMNGYLWLCE 359
              +HPL   + S     + L   ER   +  ID              S GMNGY+  C 
Sbjct: 701 VVASHPLGELIRSLNSRTNNLSNEERATIIEKIDPGLSEHIQKFLDVCSDGMNGYIASCG 760

Query: 360 RNVFRNVFPSPISSLPDIQHNQVLNVTYLNPQ--KHEHVPRPPKGVIIPKKVLSSLDIKP 419
            +   + F S +  + D+  NQV+   Y  P+  +   +      + IPKK +S +D+K 
Sbjct: 761 GDSQPSCFCSTVEGMEDVLTNQVICAIYKLPEDIRGSEITHQIPRLAIPKKTISLVDLKS 820

Query: 420 FPTLWHEDNNSRRYHGR----ERPQVPRAIAGPLLGEAAHRLVKNTLNIKPN 452
              LWHED + RR   +    +R     +I+G  LG+A+HRLV  T+N +P+
Sbjct: 821 GGLLWHEDGDKRRAPPKVIKIKRYNPEGSISGGRLGKASHRLVLQTINAQPD 872

HSP 2 Score: 115.5 bits (288), Expect = 1.6e-25
Identity = 50/70 (71.43%), Postives = 58/70 (82.86%), Query Frame = 0


Query: 1  MGVPAFYRWLADRYPRSIADVVEEEPVD-GPNGVVLPIDVSKPNPNGMEFDNLYLDMNGI 60
          MGVP+FYRWL  RYP +I +V+EEEP++    GV +PID SKPNPNG E+DNLYLDMNGI
Sbjct: 1  MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60

Query: 61 IHPCFHPEGK 70
          IHPCFHPE K
Sbjct: 61 IHPCFHPEDK 70

The following BLAST results are available for this feature:

BLAST of Carg23431 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030287.1	0.0e+00	100.00	5'-3' exoribonuclease 4, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6599289.1	0.0e+00	65.60	5'-3' exoribonuclease 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022946604.1	0.0e+00	65.33	5'-3' exoribonuclease 4 isoform X1 [Cucurbita moschata]	[more]
XP_022946605.1	0.0e+00	65.39	5'-3' exoribonuclease 4 isoform X2 [Cucurbita moschata]	[more]
XP_022999254.1	0.0e+00	64.84	5'-3' exoribonuclease 4 isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg23431 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FQ04	2.7e-168	38.35	5'-3' exoribonuclease 4 OS=Arabidopsis thaliana OX=3702 GN=XRN4 PE=1 SV=1	[more]
Q9FQ03	1.2e-102	45.82	5'-3' exoribonuclease 3 OS=Arabidopsis thaliana OX=3702 GN=XRN3 PE=1 SV=1	[more]
Q9FQ02	1.2e-86	46.92	5'-3' exoribonuclease 2 OS=Arabidopsis thaliana OX=3702 GN=XRN2 PE=1 SV=1	[more]
Q4P149	1.3e-61	35.92	5'-3' exoribonuclease 2 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN...	[more]
Q5R4L5	3.2e-60	40.32	5'-3' exoribonuclease 2 OS=Pongo abelii OX=9601 GN=XRN2 PE=2 SV=1	[more]

BLAST of Carg23431 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G4A4	0.0e+00	65.33	5'-3' exoribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111450621 PE=3 SV=1	[more]
A0A6J1G4D0	0.0e+00	65.39	5'-3' exoribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111450621 PE=3 SV=1	[more]
A0A6J1KGI7	0.0e+00	64.84	5'-3' exoribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111493680 PE=3 SV=1	[more]
A0A6J1G444	0.0e+00	97.39	5'-3' exoribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111450621 PE=3 SV=1	[more]
A0A6J1KEW9	0.0e+00	96.68	5'-3' exoribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111493680 PE=3 SV=1	[more]

BLAST of Carg23431 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54490.1	1.9e-169	38.35	exoribonuclease 4	[more]
AT1G75660.1	8.3e-104	45.82	5'-3' exoribonuclease 3	[more]
AT5G42540.1	8.4e-88	46.92	exoribonuclease 2	[more]
AT5G42540.2	2.3e-85	45.45	exoribonuclease 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.25.40.1050		coord: 190..292 e-value: 8.3E-33 score: 115.8
None	No IPR available	GENE3D	3.40.50.12390		coord: 1..108 e-value: 1.8E-17 score: 65.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 500..535
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 500..526
None	No IPR available	PANTHER	PTHR12341:SF53	5'-3' EXORIBONUCLEASE	coord: 1..69
None	No IPR available	PANTHER	PTHR12341:SF53	5'-3' EXORIBONUCLEASE	coord: 114..449
IPR041412	Xrn1, helical domain	PFAM	PF17846	XRN_M	coord: 113..401 e-value: 2.7E-117 score: 392.5
IPR004859	Putative 5-3 exonuclease	PFAM	PF03159	XRN_N	coord: 1..68 e-value: 8.0E-16 score: 58.2
IPR027073	5'-3' exoribonuclease	PANTHER	PTHR12341	5'->3' EXORIBONUCLEASE	coord: 1..69
IPR027073	5'-3' exoribonuclease	PANTHER	PTHR12341	5'->3' EXORIBONUCLEASE	coord: 114..449

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23431-RA	Carg23431-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004534	5'-3' exoribonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0004527	exonuclease activity