Carg23396 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23396
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Dolichol phosphate-mannose biosynthesis regulatory protein
Location	Carg_Chr06: 3244856 .. 3247824 (-)
RNA-Seq Expression	Carg23396
Synteny	Carg23396

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAACCCTTCCAGATTCTTGCCGCATTCCTTAATCCTTCCAATATTTTCACCTCCGATTACATTCATCGTTCGATCAATCACCCAGAATTCCGGCGACGACGACGAATCAGGTACGAGTTCTATACCACTCTATCTGGTAACACGTCGATTATCTCTGGCTGCAAAAATTTCGGCGATATTTGATCTCTGTTATGATTTTTACTGGGCGAATTCGTTGATTCCATTTGAAAAATATGAAGTATGCAATTATTGTTCTGTCTTTACATGAATTGATTTCAGTTTATAGGATGATACTGTGTTTAGCTTGATCGATATTTGCTGAGTCTGCTTCAGCAGTATTAGCTTCAATTATTTCACATTTCTTATTATAAACAAGTATTGTAGGTTAAACAGGATTGGTTGTTGGTGTGTGTAAACTAAAGTTATGTGACTATAAACCAATTGGTGACAAAAATCCCAGAAATGAGAATAGAAAGGGCAAGAACTGAAAACGTTTAGGTTTTGGTAATAAAGATTGTTACTGTTTCTTTGTGATTTGATTGCTTCATGGCATCATATGCAATGTTCATTTGGTTCTAGAATTAAGTAGTTGTTTCTGAGACACAGATGATATTGGCTATTGAATGCTTTTCCTTCATTATTTAGTAACTATGATCAAGGTTGTTAAATGATGACAGACTAAAATCCTAACATAGCCTTAAATCTATAGTTTTATTTCAAATTCAAATATCAGATTATGAAACAGTTCCTTTGTTTTGTTATGCTTTGAAGTCTCCATGAATATAACTTGGCAGAACAAAAAGGACTCTATTGTTCCCCCTCTTCTACCTCTTAAGATTTTAGATTTTTCTTCTTCTTTGCAATTTCCCCTTGAATGCCAATAGTTCCTTCGTCTTCCTTTTTCAATTACTTGTACATGCCTTTCTCTCACATTTATAAAAATCAAAACCCATTTTCATGTCTAAAACATATTTTCTGGGTATCTATGGTCCCAATGGACTGATCTCAAGTCTTCTGGGATCCATTTCAGGTCACCCATGCCAGTGGAAGTGCATTTATGGTCCTGTTTTGCAAATTTTGAAATTTGATTTTCACACCTGGGATGTTGTATTAAAATCAGAACTTTCTTGGAAAGTAATGAAACTTTTGCTCTAGGTTTTTTTTTTTTTTTTTGTCTCTTATTCCCTTGAAGCCTGATTTGTGTTCTAAAGATTATGAATTGCTTGTCATCCCAGTGCATTTCCTACTTATCACTTATATGAATGGAACTGTGAGAATCGATGATAATCTAGTTCAAACCCATAGTTTTGAATTGTTCACGTGGTGTTCCTCTTAGTTTGTTCAATATGGAACTTTTCTTCTTCTTTTTCTTAATTGAAAAATCACTTCCGTTGAGAAAAATAAACGAACACACAAAAGTGATATGAAACTTTGGACCAAAGGTCAAGCAGAAATTTCTAGCTGTTTAATGTTGTCTGAACAACATCCAGATGTGTATCTCCATTCTCCCGAGTGCATCCCGCTTGTGAGGTTGATGGAGTTAGTTCTGGTTGATTAATTATTTGTACAGATTAGCACAAGAATGCACGTATATCTATAATTGTATTATTATGGATTAGGTTGATCATATATCATTATTTTTTAAAAAAGGTCATACCAATCCCATAATCTTCTTTTTTCTCGATAAAAGGGAAGGTTGTATTAATATCCGTGCACAAGATCAAAATGAATCACGATTAGTTATTCAACAATCTAGTTTAAATGAGTGAGAGATGGTATTTGAATATCCAATTGGTGCACTTCAATGGCTTGTCAAAATTAATCATCTATGAAAATATATGAAAACTTTTTGGTGGAATTAGCAAATATTACTAATAAGGTTAAGGTTTCCTCTTGTCGTGAACTCTTTCTAGTAGTCAGACTGAATTCTTATATAACATGCCAAGCCAAAGCACTGCAGTATGTGATAACACACTTTTTGTTTAGGGTTTAGCACAGAAGTTTGGTACACGGTAATCTCTATATTTATGCTATGTTTGGCAGTACGTAGTGGCTATATAACACTTTCTATTCCTAGTTTTTATGTTTGGAAGTAATGTATTGTGTTTCCTCATATGCTTTATGAGGAAACACTAATAGAGTGTTTCAGGCACAAATAATTAATAGCATATGAGGGAACACTAACCGAGTGTTTCAGGCACAAATAATTAATAGCATATGAGGAAACACTAATAGAGTGTTTTAGGCACAAATAATTAATCGAGAAGCAGTTTAAAGTATTTTCTAGAGTGTTCAACCAATTCTCTAGTAAATTTGTTATTAAGTACGTGGTACTAAAGGCTTATAAATAAATACTTGATACTGATGCGAATTGTATGATAATCACAGGAAATACTCGATACTGATGTGAATTGTATGATAATCACAGGAAATACTCGATACTGATGTGAATTGTATGATAATCACAGGAAGTAATAGCATCAAAATGGAGTTAGCAGACAAGACGGTTGGATTTTTGTTATCGCTAACTAGCTTGTCGATATTCACTTACTATACTTTCTGGGTCATTATCCTGGTAAGCTTATCTTCCATGTTCATACATATTCTGCCAAAATTTGATCTCATTTAGTAAACTCGAGCATGTTCGTGGTTGTTATCAACCAATGTTCTTTTTTTTTTTTTTTTTTTTTTGTTAAATGGCAGCCATTTGTTGATAGTGATCACTTCATCCACAACTATTTCTTACCACAAGAATATGCCATCTTGATACCTGTATTTGCTGGTGTGGTTCTTCTGTGCTTATTAGCCATATTTGTAGGAATAGTGATGCTCAAGTCCAAAAAGAAGAAGGCATGAGGATAGAGTTCAGTATTGTCTGTATTTTTGATAGTTTACTTCAAAAATGTGCTGCCTCGATGATTTTCGAACCATTCCGGTTTGTTTTTTTTGTTAATTGATTGGTCAAAA

mRNA sequence

AAAAACCCTTCCAGATTCTTGCCGCATTCCTTAATCCTTCCAATATTTTCACCTCCGATTACATTCATCGTTCGATCAATCACCCAGAATTCCGGCGACGACGACGAATCAGGAAGTAATAGCATCAAAATGGAGTTAGCAGACAAGACGGTTGGATTTTTGTTATCGCTAACTAGCTTGTCGATATTCACTTACTATACTTTCTGGGTCATTATCCTGCCATTTGTTGATAGTGATCACTTCATCCACAACTATTTCTTACCACAAGAATATGCCATCTTGATACCTGTATTTGCTGGTGTGGTTCTTCTGTGCTTATTAGCCATATTTGTAGGAATAGTGATGCTCAAGTCCAAAAAGAAGAAGGCATGAGGATAGAGTTCAGTATTGTCTGTATTTTTGATAGTTTACTTCAAAAATGTGCTGCCTCGATGATTTTCGAACCATTCCGGTTTGTTTTTTTTGTTAATTGATTGGTCAAAA

Coding sequence (CDS)

AAAAACCCTTCCAGATTCTTGCCGCATTCCTTAATCCTTCCAATATTTTCACCTCCGATTACATTCATCGTTCGATCAATCACCCAGAATTCCGGCGACGACGACGAATCAGGAAGTAATAGCATCAAAATGGAGTTAGCAGACAAGACGGTTGGATTTTTGTTATCGCTAACTAGCTTGTCGATATTCACTTACTATACTTTCTGGGTCATTATCCTGCCATTTGTTGATAGTGATCACTTCATCCACAACTATTTCTTACCACAAGAATATGCCATCTTGATACCTGTATTTGCTGGTGTGGTTCTTCTGTGCTTATTAGCCATATTTGTAGGAATAGTGATGCTCAAGTCCAAAAAGAAGAAGGCATGA

Protein sequence

KNPSRFLPHSLILPIFSPPITFIVRSITQNSGDDDESGSNSIKMELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVLLCLLAIFVGIVMLKSKKKKA

Homology

[Close]

BLAST of Carg23396 vs. NCBI nr
Match: KAG6596723.1 (Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235.7 bits (600), Expect = 2.1e-58
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   KNPSRFLPHSLILPIFSPPITFIVRSITQNSGDDDESGSNSIKMELADKTVGFLLSLTSL 60
           KNPSRFLPHSLILPIFSPPITFIVRSITQNSGDDDESGSNSIKMELADKTVGFLLSLTSL
Sbjct: 347 KNPSRFLPHSLILPIFSPPITFIVRSITQNSGDDDESGSNSIKMELADKTVGFLLSLTSL 406

Query: 61  SIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVLLCLLAIFVGIVMLKSKK 120
           SIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVLLCLLAIFVGIVMLKSKK
Sbjct: 407 SIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVLLCLLAIFVGIVMLKSKK 466

Query: 121 KKA 124
           KKA
Sbjct: 467 KKA 469

[Close]

BLAST of Carg23396 vs. NCBI nr
Match: KAG7028258.1 (Dolichol-phosphate mannose synthase subunit 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 235.7 bits (600), Expect = 2.1e-58
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   KNPSRFLPHSLILPIFSPPITFIVRSITQNSGDDDESGSNSIKMELADKTVGFLLSLTSL 60
           KNPSRFLPHSLILPIFSPPITFIVRSITQNSGDDDESGSNSIKMELADKTVGFLLSLTSL
Sbjct: 1   KNPSRFLPHSLILPIFSPPITFIVRSITQNSGDDDESGSNSIKMELADKTVGFLLSLTSL 60

Query: 61  SIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVLLCLLAIFVGIVMLKSKK 120
           SIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVLLCLLAIFVGIVMLKSKK
Sbjct: 61  SIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVLLCLLAIFVGIVMLKSKK 120

Query: 121 KKA 124
           KKA
Sbjct: 121 KKA 123

[Close]

BLAST of Carg23396 vs. NCBI nr
Match: XP_023540556.1 (dolichol-phosphate mannose synthase subunit 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 151.4 bits (381), Expect = 5.2e-33
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 44  MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL 103
           MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL
Sbjct: 1   MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL 60

Query: 104 LCLLAIFVGIVMLKSKKKKA 124
           LCLLAIFVGIVMLKSKKKKA
Sbjct: 61  LCLLAIFVGIVMLKSKKKKA 80

[Close]

BLAST of Carg23396 vs. NCBI nr
Match: XP_022925448.1 (dolichol-phosphate mannose synthase subunit 2 [Cucurbita moschata])

HSP 1 Score: 151.0 bits (380), Expect = 6.8e-33
Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 44  MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL 103
           MELADKTVGFLLSLTSLSIFTYYTFW+IILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL
Sbjct: 1   MELADKTVGFLLSLTSLSIFTYYTFWIIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL 60

Query: 104 LCLLAIFVGIVMLKSKKKKA 124
           LCLLAIFVGIVMLKSKKKKA
Sbjct: 61  LCLLAIFVGIVMLKSKKKKA 80

[Close]

BLAST of Carg23396 vs. NCBI nr
Match: XP_023005617.1 (dolichol-phosphate mannose synthase subunit 2 [Cucurbita maxima])

HSP 1 Score: 149.1 bits (375), Expect = 2.6e-32
Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = 0


Query: 44  MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL 103
           MELADK VGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL
Sbjct: 1   MELADKMVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL 60

Query: 104 LCLLAIFVGIVMLKSKKKKA 124
           LCLLAIFVGIVMLKSKKKKA
Sbjct: 61  LCLLAIFVGIVMLKSKKKKA 80

[Close]

BLAST of Carg23396 vs. ExPASy Swiss-Prot
Match: Q9CA79 (Dolichol-phosphate mannose synthase subunit 2 OS=Arabidopsis thaliana OX=3702 GN=DPMS2 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 8.1e-29
Identity = 64/80 (80.00%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 44  MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL 103
           MELAD+ VG LLS  SLSIFTYYTFWVIILPFVDSDHFIH YFLPQ+YAIL+PVFAG+ L
Sbjct: 1   MELADRAVGLLLSSISLSIFTYYTFWVIILPFVDSDHFIHKYFLPQDYAILVPVFAGIAL 60

Query: 104 LCLLAIFVGIVMLKSKKKKA 124
           L L+++F+G+VMLKSKKKKA
Sbjct: 61  LSLISVFIGMVMLKSKKKKA 80

[Close]

BLAST of Carg23396 vs. ExPASy Swiss-Prot
Match: Q9Z324 (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Mus musculus OX=10090 GN=Dpm2 PE=3 SV=3)

HSP 1 Score: 85.5 bits (210), Expect = 4.6e-16
Identity = 46/78 (58.97%), Postives = 59/78 (75.64%), Query Frame = 0


Query: 48  DKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVLLCLL 107
           D+ VGF L   SL IFTYYT WVI+LPF+DS H IH YFLP+ YA+L+P+ AG++LL  +
Sbjct: 6   DQAVGFGLVAVSLIIFTYYTTWVILLPFIDSQHVIHKYFLPRAYAVLLPLAAGLLLLLFV 65

Query: 108 AIFVGIVMLKSKK--KKA 124
            +F+  VMLKS+K  KKA
Sbjct: 66  GLFITYVMLKSQKITKKA 83

[Close]

BLAST of Carg23396 vs. ExPASy Swiss-Prot
Match: Q9Z325 (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Rattus norvegicus OX=10116 GN=Dpm2 PE=1 SV=3)

HSP 1 Score: 84.3 bits (207), Expect = 1.0e-15
Identity = 45/78 (57.69%), Postives = 59/78 (75.64%), Query Frame = 0


Query: 48  DKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVLLCLL 107
           D+ VGF L   SL IFTYYT WVI+LPF+DS H IH YFLP+ YA+L+P+ AG++LL  +
Sbjct: 6   DQAVGFGLVAVSLIIFTYYTTWVILLPFIDSQHVIHKYFLPRAYAVLLPLAAGLLLLLFV 65

Query: 108 AIFVGIVMLKSKK--KKA 124
            +F+  V+LKS+K  KKA
Sbjct: 66  GLFITYVLLKSQKVTKKA 83

[Close]

BLAST of Carg23396 vs. ExPASy Swiss-Prot
Match: Q9Z1P1 (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Cricetulus griseus OX=10029 GN=DPM2 PE=3 SV=3)

HSP 1 Score: 84.0 bits (206), Expect = 1.3e-15
Identity = 45/78 (57.69%), Postives = 58/78 (74.36%), Query Frame = 0


Query: 48  DKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVLLCLL 107
           D+ VGF L   SL IFTYYT WVI+LPF+DS H IH YFLP+ YA+LIP+  G++LL  +
Sbjct: 6   DQVVGFGLVAVSLIIFTYYTTWVILLPFIDSQHVIHKYFLPRAYAVLIPLATGLLLLLFV 65

Query: 108 AIFVGIVMLKSKK--KKA 124
            +F+  VMLKS++  KKA
Sbjct: 66  GLFITYVMLKSRRLTKKA 83

[Close]

BLAST of Carg23396 vs. ExPASy Swiss-Prot
Match: O94777 (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Homo sapiens OX=9606 GN=DPM2 PE=1 SV=3)

HSP 1 Score: 82.0 bits (201), Expect = 5.1e-15
Identity = 44/78 (56.41%), Postives = 57/78 (73.08%), Query Frame = 0


Query: 48  DKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVLLCLL 107
           D+ VG  L   SL IFTYYT WVI+LPF+DS H IH YFLP+ YA+ IP+ AG++LL  +
Sbjct: 6   DQVVGLGLVAVSLIIFTYYTAWVILLPFIDSQHVIHKYFLPRAYAVAIPLAAGLLLLLFV 65

Query: 108 AIFVGIVMLKSKK--KKA 124
            +F+  VMLK+K+  KKA
Sbjct: 66  GLFISYVMLKTKRVTKKA 83

[Close]

BLAST of Carg23396 vs. ExPASy TrEMBL
Match: A0A6J1EF77 (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC111432714 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.3e-33
Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 44  MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL 103
           MELADKTVGFLLSLTSLSIFTYYTFW+IILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL
Sbjct: 1   MELADKTVGFLLSLTSLSIFTYYTFWIIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL 60

Query: 104 LCLLAIFVGIVMLKSKKKKA 124
           LCLLAIFVGIVMLKSKKKKA
Sbjct: 61  LCLLAIFVGIVMLKSKKKKA 80

[Close]

BLAST of Carg23396 vs. ExPASy TrEMBL
Match: A0A6J1KTM4 (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC111498550 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.2e-32
Identity = 79/80 (98.75%), Postives = 79/80 (98.75%), Query Frame = 0


Query: 44  MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL 103
           MELADK VGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL
Sbjct: 1   MELADKMVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL 60

Query: 104 LCLLAIFVGIVMLKSKKKKA 124
           LCLLAIFVGIVMLKSKKKKA
Sbjct: 61  LCLLAIFVGIVMLKSKKKKA 80

[Close]

BLAST of Carg23396 vs. ExPASy TrEMBL
Match: A0A0A0L3V9 (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Cucumis sativus OX=3659 GN=Csa_3G008860 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.6e-32
Identity = 77/80 (96.25%), Postives = 78/80 (97.50%), Query Frame = 0


Query: 44  MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL 103
           MELADKTVGFLLSLTSLSIFTYYTFWV+ILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL
Sbjct: 1   MELADKTVGFLLSLTSLSIFTYYTFWVVILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL 60

Query: 104 LCLLAIFVGIVMLKSKKKKA 124
           LCLL IFVG VMLKSKKKKA
Sbjct: 61  LCLLGIFVGTVMLKSKKKKA 80

[Close]

BLAST of Carg23396 vs. ExPASy TrEMBL
Match: A0A1S3BL34 (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Cucumis melo OX=3656 GN=LOC103490758 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.7e-32
Identity = 76/80 (95.00%), Postives = 78/80 (97.50%), Query Frame = 0


Query: 44  MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL 103
           MELADKTVGFLLSLTSLSIFTYYTFWV+ILPFVDSDHF+HNYFLPQEYAILIPVFAGVVL
Sbjct: 1   MELADKTVGFLLSLTSLSIFTYYTFWVVILPFVDSDHFVHNYFLPQEYAILIPVFAGVVL 60

Query: 104 LCLLAIFVGIVMLKSKKKKA 124
           LCLL IFVG VMLKSKKKKA
Sbjct: 61  LCLLGIFVGTVMLKSKKKKA 80

[Close]

BLAST of Carg23396 vs. ExPASy TrEMBL
Match: A0A6J1E5W0 (Dolichol phosphate-mannose biosynthesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC111431073 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.8e-31
Identity = 76/80 (95.00%), Postives = 79/80 (98.75%), Query Frame = 0


Query: 44  MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL 103
           MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIH+YFLPQE+AILIPVFAGVVL
Sbjct: 1   MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHSYFLPQEFAILIPVFAGVVL 60

Query: 104 LCLLAIFVGIVMLKSKKKKA 124
           LCLL IFVGIVMLKSK+KKA
Sbjct: 61  LCLLGIFVGIVMLKSKRKKA 80

[Close]

BLAST of Carg23396 vs. TAIR 10
Match: AT1G74340.1 (dolichol phosphate-mannose biosynthesis regulatory protein-related )

HSP 1 Score: 127.9 bits (320), Expect = 5.7e-30
Identity = 64/80 (80.00%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 44  MELADKTVGFLLSLTSLSIFTYYTFWVIILPFVDSDHFIHNYFLPQEYAILIPVFAGVVL 103
           MELAD+ VG LLS  SLSIFTYYTFWVIILPFVDSDHFIH YFLPQ+YAIL+PVFAG+ L
Sbjct: 1   MELADRAVGLLLSSISLSIFTYYTFWVIILPFVDSDHFIHKYFLPQDYAILVPVFAGIAL 60

Query: 104 LCLLAIFVGIVMLKSKKKKA 124
           L L+++F+G+VMLKSKKKKA
Sbjct: 61  LSLISVFIGMVMLKSKKKKA 80

The following BLAST results are available for this feature:

BLAST of Carg23396 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596723.1	2.1e-58	100.00	Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7028258.1	2.1e-58	100.00	Dolichol-phosphate mannose synthase subunit 2, partial [Cucurbita argyrosperma s...	[more]
XP_023540556.1	5.2e-33	100.00	dolichol-phosphate mannose synthase subunit 2 [Cucurbita pepo subsp. pepo]	[more]
XP_022925448.1	6.8e-33	98.75	dolichol-phosphate mannose synthase subunit 2 [Cucurbita moschata]	[more]
XP_023005617.1	2.6e-32	98.75	dolichol-phosphate mannose synthase subunit 2 [Cucurbita maxima]	[more]

BLAST of Carg23396 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CA79	8.1e-29	80.00	Dolichol-phosphate mannose synthase subunit 2 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9Z324	4.6e-16	58.97	Dolichol phosphate-mannose biosynthesis regulatory protein OS=Mus musculus OX=10...	[more]
Q9Z325	1.0e-15	57.69	Dolichol phosphate-mannose biosynthesis regulatory protein OS=Rattus norvegicus ...	[more]
Q9Z1P1	1.3e-15	57.69	Dolichol phosphate-mannose biosynthesis regulatory protein OS=Cricetulus griseus...	[more]
O94777	5.1e-15	56.41	Dolichol phosphate-mannose biosynthesis regulatory protein OS=Homo sapiens OX=96...	[more]

BLAST of Carg23396 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EF77	3.3e-33	98.75	Dolichol phosphate-mannose biosynthesis regulatory protein OS=Cucurbita moschata...	[more]
A0A6J1KTM4	1.2e-32	98.75	Dolichol phosphate-mannose biosynthesis regulatory protein OS=Cucurbita maxima O...	[more]
A0A0A0L3V9	3.6e-32	96.25	Dolichol phosphate-mannose biosynthesis regulatory protein OS=Cucumis sativus OX...	[more]
A0A1S3BL34	4.7e-32	95.00	Dolichol phosphate-mannose biosynthesis regulatory protein OS=Cucumis melo OX=36...	[more]
A0A6J1E5W0	1.8e-31	95.00	Dolichol phosphate-mannose biosynthesis regulatory protein OS=Cucurbita moschata...	[more]

BLAST of Carg23396 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74340.1	5.7e-30	80.00	dolichol phosphate-mannose biosynthesis regulatory protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009914	Dolichol phosphate-mannose biosynthesis regulatory	PFAM	PF07297	DPM2	coord: 47..122 e-value: 1.4E-34 score: 118.1
IPR009914	Dolichol phosphate-mannose biosynthesis regulatory	PANTHER	PTHR15039	DOLICHOL PHOSPHATE-MANNOSE BIOSYNTHESIS REGULATORY PROTEIN	coord: 24..123
None	No IPR available	PANTHER	PTHR15039:SF12	DOLICHOL PHOSPHATE-MANNOSE BIOSYNTHESIS REGULATORY PROTEIN	coord: 24..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23396-RA	Carg23396-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019348	dolichol metabolic process
biological_process	GO:0006506	GPI anchor biosynthetic process
biological_process	GO:0006486	protein glycosylation
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0033185	dolichol-phosphate-mannose synthase complex
cellular_component	GO:0030176	integral component of endoplasmic reticulum membrane
molecular_function	GO:0030234	enzyme regulator activity