Carg23378 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23378
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	AT-hook motif nuclear-localized protein
Location	Carg_Chr06: 3358808 .. 3359518 (-)
RNA-Seq Expression	Carg23378
Synteny	Carg23378

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAATTGGACTTAGGAACTCGATATTTCTCCGCCGCCGACCACGACGACGACGACGACGATCCCCACCAATCCCACGGCGGCGCTGACGATGTCCTTGGCCGCCGCCCTCGCGGCCGACCACCAGGTTCAAAAAATAAGCCGAAGCCGCCGGTTATCATCACCCGCGAGAGCGCCAACACGCTACGTGTCCACATCTTAGAGGTCAACAGCGGCTGTGACATATTTGATTGCATCGCCGCCTACGCGCGTCGGCGACAGCGTGGGATCTGTATTTTGAGCGGTAGTGGCAACGTCAGTAACGTCGGAATCCGCCAACCAGCAGCGGCCGGAGCCGTACTGACTCTTCATGGGAGATTCGAGATTTTGTCGTTATCTGGATCGTTTCTTCCGCCGCCTGCTCCGGCTAGCGCCACTAGTTTGACTATATTTTTGGCCGGAGGGCAGGGACAGGTGGTCGGCGGGACGGTGGCTGGAGAATTAACAGCCGCAGGACCAGTGATTTTGATTGTAGCTTCGTTTAGTAATGTGGCGTATGAGAGATTACCACTGGATGAGGAAGATCAGCAGCAGCAAGTCCCCGTCGCAAGCGGCGGAGTTGGCGGCGGCGGCGGCGGCGACAACCCATTTCAAGACGCATCAAATTCAGGAGTTCCATTTTTGAATTATCCACTTCATATGCAAAATATTCAGCTTCCACCTTTCTGA

mRNA sequence

ATGGCGGAATTGGACTTAGGAACTCGATATTTCTCCGCCGCCGACCACGACGACGACGACGACGATCCCCACCAATCCCACGGCGGCGCTGACGATGTCCTTGGCCGCCGCCCTCGCGGCCGACCACCAGGTTCAAAAAATAAGCCGAAGCCGCCGGTTATCATCACCCGCGAGAGCGCCAACACGCTACGTGTCCACATCTTAGAGGTCAACAGCGGCTGTGACATATTTGATTGCATCGCCGCCTACGCGCGTCGGCGACAGCGTGGGATCTGTATTTTGAGCGGTAGTGGCAACGTCAGTAACGTCGGAATCCGCCAACCAGCAGCGGCCGGAGCCGTACTGACTCTTCATGGGAGATTCGAGATTTTGTCGTTATCTGGATCGTTTCTTCCGCCGCCTGCTCCGGCTAGCGCCACTAGTTTGACTATATTTTTGGCCGGAGGGCAGGGACAGGTGGTCGGCGGGACGGTGGCTGGAGAATTAACAGCCGCAGGACCAGTGATTTTGATTGTAGCTTCGTTTAGTAATGTGGCGTATGAGAGATTACCACTGGATGAGGAAGATCAGCAGCAGCAAGTCCCCGTCGCAAGCGGCGGAGTTGGCGGCGGCGGCGGCGGCGACAACCCATTTCAAGACGCATCAAATTCAGGAGTTCCATTTTTGAATTATCCACTTCATATGCAAAATATTCAGCTTCCACCTTTCTGA

Coding sequence (CDS)

ATGGCGGAATTGGACTTAGGAACTCGATATTTCTCCGCCGCCGACCACGACGACGACGACGACGATCCCCACCAATCCCACGGCGGCGCTGACGATGTCCTTGGCCGCCGCCCTCGCGGCCGACCACCAGGTTCAAAAAATAAGCCGAAGCCGCCGGTTATCATCACCCGCGAGAGCGCCAACACGCTACGTGTCCACATCTTAGAGGTCAACAGCGGCTGTGACATATTTGATTGCATCGCCGCCTACGCGCGTCGGCGACAGCGTGGGATCTGTATTTTGAGCGGTAGTGGCAACGTCAGTAACGTCGGAATCCGCCAACCAGCAGCGGCCGGAGCCGTACTGACTCTTCATGGGAGATTCGAGATTTTGTCGTTATCTGGATCGTTTCTTCCGCCGCCTGCTCCGGCTAGCGCCACTAGTTTGACTATATTTTTGGCCGGAGGGCAGGGACAGGTGGTCGGCGGGACGGTGGCTGGAGAATTAACAGCCGCAGGACCAGTGATTTTGATTGTAGCTTCGTTTAGTAATGTGGCGTATGAGAGATTACCACTGGATGAGGAAGATCAGCAGCAGCAAGTCCCCGTCGCAAGCGGCGGAGTTGGCGGCGGCGGCGGCGGCGACAACCCATTTCAAGACGCATCAAATTCAGGAGTTCCATTTTTGAATTATCCACTTCATATGCAAAATATTCAGCTTCCACCTTTCTGA

Protein sequence

MAELDLGTRYFSAADHDDDDDDPHQSHGGADDVLGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIVASFSNVAYERLPLDEEDQQQQVPVASGGVGGGGGGDNPFQDASNSGVPFLNYPLHMQNIQLPPF

Homology

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BLAST of Carg23378 vs. NCBI nr
Match: KAG7028276.1 (AT-hook motif nuclear-localized protein 21, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 468.8 bits (1205), Expect = 2.8e-128
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0


Query: 1   MAELDLGTRYFSAADHDDDDDDPHQSHGGADDVLGRRPRGRPPGSKNKPKPPVIITRESA 60
           MAELDLGTRYFSAADHDDDDDDPHQSHGGADDVLGRRPRGRPPGSKNKPKPPVIITRESA
Sbjct: 1   MAELDLGTRYFSAADHDDDDDDPHQSHGGADDVLGRRPRGRPPGSKNKPKPPVIITRESA 60

Query: 61  NTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGR 120
           NTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGR
Sbjct: 61  NTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGR 120

Query: 121 FEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIVASFSNVAY 180
           FEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIVASFSNVAY
Sbjct: 121 FEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIVASFSNVAY 180

Query: 181 ERLPLDEEDQQQQVPVASGGVGGGGGGDNPFQDASNSGVPFLNYPLHMQNIQLPPF 237
           ERLPLDEEDQQQQVPVASGGVGGGGGGDNPFQDASNSGVPFLNYPLHMQNIQLPPF
Sbjct: 181 ERLPLDEEDQQQQVPVASGGVGGGGGGDNPFQDASNSGVPFLNYPLHMQNIQLPPF 236

[Close]

BLAST of Carg23378 vs. NCBI nr
Match: KAG6596740.1 (AT-hook motif nuclear-localized protein 21, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 456.4 bits (1173), Expect = 1.4e-124
Identity = 234/237 (98.73%), Postives = 234/237 (98.73%), Query Frame = 0


Query: 1   MAELDLGTRYFSAADHDDDDDDPHQSHGGADDVLGRRPRGRPPGSKNKPKPPVIITRESA 60
           MAELDLGTRYFSAADH DDDDDPHQSHGGADDVLGRRPRGRPPGSKNKPKPPVIITRESA
Sbjct: 1   MAELDLGTRYFSAADH-DDDDDPHQSHGGADDVLGRRPRGRPPGSKNKPKPPVIITRESA 60

Query: 61  NTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGR 120
           NTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGR
Sbjct: 61  NTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGR 120

Query: 121 FEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIVASFSNVAY 180
           FEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTAAGPVILI ASFSNVAY
Sbjct: 121 FEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIAASFSNVAY 180

Query: 181 ERLPLDEEDQQQQVPVASGGV-GGGGGGDNPFQDASNSGVPFLNYPLHMQNIQLPPF 237
           ERLPLDEEDQQQQVPVASGGV GGGGGGDNPFQDASNSGVPFLNYPLHMQNIQLPPF
Sbjct: 181 ERLPLDEEDQQQQVPVASGGVGGGGGGGDNPFQDASNSGVPFLNYPLHMQNIQLPPF 236

[Close]

BLAST of Carg23378 vs. NCBI nr
Match: XP_022944488.1 (AT-hook motif nuclear-localized protein 23-like [Cucurbita moschata])

HSP 1 Score: 443.4 bits (1139), Expect = 1.3e-120
Identity = 227/236 (96.19%), Postives = 228/236 (96.61%), Query Frame = 0


Query: 1   MAELDLGTRYFSAADHDDDDDDPHQSHGGADDVLGRRPRGRPPGSKNKPKPPVIITRESA 60
           MAELDLGTRYFSAADH  DDDDPHQSHGGADDVLGRRPRGRPPGSKNKPKPPVIITRESA
Sbjct: 1   MAELDLGTRYFSAADH-HDDDDPHQSHGGADDVLGRRPRGRPPGSKNKPKPPVIITRESA 60

Query: 61  NTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGR 120
           NTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSG+GNVSNVGIRQPAA GAVLTLHGR
Sbjct: 61  NTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGTGNVSNVGIRQPAAPGAVLTLHGR 120

Query: 121 FEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIVASFSNVAY 180
           FEILSLSGSFLPPPAP SATSLTIFLAGGQGQVVGGTVAGELTAAGPVILI ASFSNVAY
Sbjct: 121 FEILSLSGSFLPPPAPTSATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIAASFSNVAY 180

Query: 181 ERLPLDEEDQQQQVPVASGGVGGGGGGDNPFQDASNSGVPFLNYPLHMQNIQLPPF 237
           ERLPLDEEDQQQQVPVA GGV  GGGGDNPFQDASNSGVPFLNYPLHMQNIQLPPF
Sbjct: 181 ERLPLDEEDQQQQVPVAGGGV--GGGGDNPFQDASNSGVPFLNYPLHMQNIQLPPF 233

[Close]

BLAST of Carg23378 vs. NCBI nr
Match: XP_023005523.1 (AT-hook motif nuclear-localized protein 23-like [Cucurbita maxima])

HSP 1 Score: 439.1 bits (1128), Expect = 2.4e-119
Identity = 224/237 (94.51%), Postives = 229/237 (96.62%), Query Frame = 0


Query: 1   MAELDLGTRYFSAADHDDDDDDPHQSHGGADDVLGRRPRGRPPGSKNKPKPPVIITRESA 60
           MAELDLG+RYFSAADH DDDDDPHQSHGG+DDVLGRR RGRPPGSKNKPKPPVIITRESA
Sbjct: 1   MAELDLGSRYFSAADH-DDDDDPHQSHGGSDDVLGRRSRGRPPGSKNKPKPPVIITRESA 60

Query: 61  NTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGR 120
           NTLRVHILEV+SGCDIFDC+AAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGR
Sbjct: 61  NTLRVHILEVSSGCDIFDCVAAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGR 120

Query: 121 FEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIVASFSNVAY 180
           FEILSLSGSFLPPPAPA+ATSLTIFLAGGQGQVVGGTVAGELTAAGPVILI ASFSNVAY
Sbjct: 121 FEILSLSGSFLPPPAPANATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIAASFSNVAY 180

Query: 181 ERLPLDEEDQQQQVPVASGGVGGG-GGGDNPFQDASNSGVPFLNYPLHMQNIQLPPF 237
           ERLPLDEEDQQQQVPVA  GVGGG GG DNPFQD SNSGVPFLNYPLHMQNIQLPPF
Sbjct: 181 ERLPLDEEDQQQQVPVAGSGVGGGDGGSDNPFQDPSNSGVPFLNYPLHMQNIQLPPF 236

[Close]

BLAST of Carg23378 vs. NCBI nr
Match: XP_023539505.1 (AT-hook motif nuclear-localized protein 23-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 438.7 bits (1127), Expect = 3.1e-119
Identity = 225/236 (95.34%), Postives = 227/236 (96.19%), Query Frame = 0


Query: 1   MAELDLGTRYFSAADHDDDDDDPHQSHGGADDVLGRRPRGRPPGSKNKPKPPVIITRESA 60
           MAELDLGTRYFSAADH  DDDDPHQSHGGADDVLGRRPRGRP GSKNKPKPPVIITRESA
Sbjct: 1   MAELDLGTRYFSAADH-HDDDDPHQSHGGADDVLGRRPRGRPAGSKNKPKPPVIITRESA 60

Query: 61  NTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGR 120
           NTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGR
Sbjct: 61  NTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGR 120

Query: 121 FEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIVASFSNVAY 180
           FEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTAAGPVILI ASFSNVAY
Sbjct: 121 FEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIAASFSNVAY 180

Query: 181 ERLPLDEEDQQQQVPVASGGVGGGGGGDNPFQDASNSGVPFLNYPLHMQNIQLPPF 237
           ERLP++EEDQQQQVPV  GGV   GGGDNPFQDASNSGVPFLNYPLHMQNIQLPPF
Sbjct: 181 ERLPVEEEDQQQQVPVVGGGV---GGGDNPFQDASNSGVPFLNYPLHMQNIQLPPF 232

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BLAST of Carg23378 vs. ExPASy Swiss-Prot
Match: O23620 (AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AHL23 PE=1 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.1e-82
Identity = 157/212 (74.06%), Postives = 178/212 (83.96%), Query Frame = 0


Query: 27  HGGADDVLGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARR 86
           HGG  DV+GRRPRGRPPGSKNKPKPPVIITRESANTLR HILEV +GCD+FDC+A YARR
Sbjct: 73  HGGGGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVTNGCDVFDCVATYARR 132

Query: 87  RQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFL 146
           RQRGIC+LSGSG V+NV IRQP+AAGAV+TL G FEILSLSGSFLPPPAP  ATSLTIFL
Sbjct: 133 RQRGICVLSGSGTVTNVSIRQPSAAGAVVTLQGTFEILSLSGSFLPPPAPPGATSLTIFL 192

Query: 147 AGGQGQVVGGTVAGELTAAGPVILIVASFSNVAYERLPLDEEDQQQQVPVASGGVGGGGG 206
           AGGQGQVVGG+V GELTAAGPVI+I ASF+NVAYERLPL+E++QQQQ+       GG  G
Sbjct: 193 AGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEDEQQQQLG------GGSNG 252

Query: 207 GDNPFQDAS---NSGVPFLNYPLHMQ-NIQLP 235
           G N F + +     G+PF N P++MQ N+QLP
Sbjct: 253 GGNLFPEVAAGGGGGLPFFNLPMNMQPNVQLP 278

[Close]

BLAST of Carg23378 vs. ExPASy Swiss-Prot
Match: O82166 (AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AHL21 PE=2 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.1e-74
Identity = 143/206 (69.42%), Postives = 165/206 (80.10%), Query Frame = 0


Query: 28  GGADDVLGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRR 87
           GG+ D++ RRPRGRP GSKNKPKPPVI+TRESANTLR HILEV SGCD+F+CI+ YARRR
Sbjct: 70  GGSGDLVMRRPRGRPAGSKNKPKPPVIVTRESANTLRAHILEVGSGCDVFECISTYARRR 129

Query: 88  QRGICILSGSGNVSNVGIRQPAAAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLA 147
           QRGIC+LSG+G V+NV IRQP AAGAV+TL G FEILSLSGSFLPPPAP  ATSLTIFLA
Sbjct: 130 QRGICVLSGTGTVTNVSIRQPTAAGAVVTLRGTFEILSLSGSFLPPPAPPGATSLTIFLA 189

Query: 148 GGQGQVVGGTVAGELTAAGPVILIVASFSNVAYERLPLDEEDQQQQVPVASGGVGGGGGG 207
           G QGQVVGG V GEL AAGPV+++ ASF+NVAYERLPLDE ++  Q        GGGGGG
Sbjct: 190 GAQGQVVGGNVVGELMAAGPVMVMAASFTNVAYERLPLDEHEEHLQ-------SGGGGGG 249

Query: 208 DNPFQDAS--NSGVPFLNYPLHMQNI 232
            N + +A+    G+PF N P+ M  I
Sbjct: 250 GNMYSEATGGGGGLPFFNLPMSMPQI 268

[Close]

BLAST of Carg23378 vs. ExPASy Swiss-Prot
Match: Q9SZ70 (AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AHL26 PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 6.0e-65
Identity = 127/218 (58.26%), Postives = 164/218 (75.23%), Query Frame = 0


Query: 28  GGADDVLGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRR 87
           GG+ + + RRPRGRP GSKNKPK P+IITR+SAN LR H++E+  GCDI DC+A +ARRR
Sbjct: 110 GGSGEQMTRRPRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRR 169

Query: 88  QRGICILSGSGNVSNVGIRQPAA-AGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFL 147
           QRG+C++SG+G+V+NV IRQP +  G+V++LHGRFEILSLSGSFLPPPAP +AT L+++L
Sbjct: 170 QRGVCVMSGTGSVTNVTIRQPGSPPGSVVSLHGRFEILSLSGSFLPPPAPPAATGLSVYL 229

Query: 148 AGGQGQVVGGTVAGELTAAGPVILIVASFSNVAYERLPLDEEDQQQQVPVASGGVGGGGG 207
           AGGQGQVVGG+V G L  +GPV+++ ASFSN AYERLPL+E++ Q  V    GG GGGGG
Sbjct: 230 AGGQGQVVGGSVVGPLLCSGPVVVMAASFSNAAYERLPLEEDEMQTPVQGGGGGGGGGGG 289

Query: 208 -GDNPFQD--------ASNSGVPFLNYPLHMQNIQLPP 236
            G  P           A+  G+P    P  + ++QLPP
Sbjct: 290 MGSPPMMGQQQAMAAMAAAQGLP----PNLLGSVQLPP 323

[Close]

BLAST of Carg23378 vs. ExPASy Swiss-Prot
Match: O49662 (AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AHL24 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.1e-61
Identity = 116/182 (63.74%), Postives = 146/182 (80.22%), Query Frame = 0


Query: 29  GADDVLGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQ 88
           G D  + RRPRGRP GSKNKPKPP+IITR+SAN LR H++E+  GCD+ + +A +ARRRQ
Sbjct: 98  GGDHQMTRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEIGDGCDLVESVATFARRRQ 157

Query: 89  RGICILSGSGNVSNVGIRQPA---AAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIF 148
           RG+C++SG+GNV+NV IRQP    + G+V++LHGRFEILSLSGSFLPPPAP +AT L+++
Sbjct: 158 RGVCVMSGTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFLPPPAPPTATGLSVY 217

Query: 149 LAGGQGQVVGGTVAGELTAAGPVILIVASFSNVAYERLPLDEEDQQQQVPVASGGVGGGG 208
           LAGGQGQVVGG+V G L  AGPV+++ ASFSN AYERLPL+E++ Q  V       GGGG
Sbjct: 218 LAGGQGQVVGGSVVGPLLCAGPVVVMAASFSNAAYERLPLEEDEMQTPVH------GGGG 273

[Close]

BLAST of Carg23378 vs. ExPASy Swiss-Prot
Match: O22130 (AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AHL22 PE=1 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.0e-60
Identity = 123/225 (54.67%), Postives = 156/225 (69.33%), Query Frame = 0


Query: 28  GGADDVLGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRR 87
           GG D+ + RRPRGRP GSKNKPKPP+IITR+SAN L+ H++EV +GCD+ + +  +ARRR
Sbjct: 81  GGGDNHITRRPRGRPAGSKNKPKPPIIITRDSANALKSHVMEVANGCDVMESVTVFARRR 140

Query: 88  QRGICILSGSGNVSNVGIRQPAA----AGAVLTLHGRFEILSLSGSFLPPPAPASATSLT 147
           QRGIC+LSG+G V+NV IRQPA+      +V+ LHGRFEILSLSGSFLPPPAP +A+ LT
Sbjct: 141 QRGICVLSGNGAVTNVTIRQPASVPGGGSSVVNLHGRFEILSLSGSFLPPPAPPAASGLT 200

Query: 148 IFLAGGQGQVVGGTVAGELTAAGPVILIVASFSNVAYERLPLDEEDQQQQVPVA-----S 207
           I+LAGGQGQVVGG+V G L A+GPV+++ ASF N AYERLPL+E+DQ++Q   A      
Sbjct: 201 IYLAGGQGQVVGGSVVGPLMASGPVVIMAASFGNAAYERLPLEEDDQEEQTAGAVANNID 260

Query: 208 GGVGGGGGGDNPFQDASNSGVPFLNYPLH---------MQNIQLP 235
           G    GGG     Q         +  P           M ++QLP
Sbjct: 261 GNATMGGGTQTQTQTQQQQQQQLMQDPTSFIQGLPPNLMNSVQLP 305

[Close]

BLAST of Carg23378 vs. ExPASy TrEMBL
Match: A0A6J1FY37 (AT-hook motif nuclear-localized protein 23-like OS=Cucurbita moschata OX=3662 GN=LOC111448929 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.1e-121
Identity = 227/236 (96.19%), Postives = 228/236 (96.61%), Query Frame = 0


Query: 1   MAELDLGTRYFSAADHDDDDDDPHQSHGGADDVLGRRPRGRPPGSKNKPKPPVIITRESA 60
           MAELDLGTRYFSAADH  DDDDPHQSHGGADDVLGRRPRGRPPGSKNKPKPPVIITRESA
Sbjct: 1   MAELDLGTRYFSAADH-HDDDDPHQSHGGADDVLGRRPRGRPPGSKNKPKPPVIITRESA 60

Query: 61  NTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGR 120
           NTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSG+GNVSNVGIRQPAA GAVLTLHGR
Sbjct: 61  NTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGTGNVSNVGIRQPAAPGAVLTLHGR 120

Query: 121 FEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIVASFSNVAY 180
           FEILSLSGSFLPPPAP SATSLTIFLAGGQGQVVGGTVAGELTAAGPVILI ASFSNVAY
Sbjct: 121 FEILSLSGSFLPPPAPTSATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIAASFSNVAY 180

Query: 181 ERLPLDEEDQQQQVPVASGGVGGGGGGDNPFQDASNSGVPFLNYPLHMQNIQLPPF 237
           ERLPLDEEDQQQQVPVA GGV  GGGGDNPFQDASNSGVPFLNYPLHMQNIQLPPF
Sbjct: 181 ERLPLDEEDQQQQVPVAGGGV--GGGGDNPFQDASNSGVPFLNYPLHMQNIQLPPF 233

[Close]

BLAST of Carg23378 vs. ExPASy TrEMBL
Match: A0A6J1L2E7 (AT-hook motif nuclear-localized protein 23-like OS=Cucurbita maxima OX=3661 GN=LOC111498487 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 1.2e-119
Identity = 224/237 (94.51%), Postives = 229/237 (96.62%), Query Frame = 0


Query: 1   MAELDLGTRYFSAADHDDDDDDPHQSHGGADDVLGRRPRGRPPGSKNKPKPPVIITRESA 60
           MAELDLG+RYFSAADH DDDDDPHQSHGG+DDVLGRR RGRPPGSKNKPKPPVIITRESA
Sbjct: 1   MAELDLGSRYFSAADH-DDDDDPHQSHGGSDDVLGRRSRGRPPGSKNKPKPPVIITRESA 60

Query: 61  NTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGR 120
           NTLRVHILEV+SGCDIFDC+AAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGR
Sbjct: 61  NTLRVHILEVSSGCDIFDCVAAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGR 120

Query: 121 FEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIVASFSNVAY 180
           FEILSLSGSFLPPPAPA+ATSLTIFLAGGQGQVVGGTVAGELTAAGPVILI ASFSNVAY
Sbjct: 121 FEILSLSGSFLPPPAPANATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIAASFSNVAY 180

Query: 181 ERLPLDEEDQQQQVPVASGGVGGG-GGGDNPFQDASNSGVPFLNYPLHMQNIQLPPF 237
           ERLPLDEEDQQQQVPVA  GVGGG GG DNPFQD SNSGVPFLNYPLHMQNIQLPPF
Sbjct: 181 ERLPLDEEDQQQQVPVAGSGVGGGDGGSDNPFQDPSNSGVPFLNYPLHMQNIQLPPF 236

[Close]

BLAST of Carg23378 vs. ExPASy TrEMBL
Match: A0A6J1EBN1 (AT-hook motif nuclear-localized protein OS=Cucurbita moschata OX=3662 GN=LOC111431098 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 4.0e-104
Identity = 206/260 (79.23%), Postives = 217/260 (83.46%), Query Frame = 0


Query: 1   MAELDLGTRY-----------------FSAADHDDDDDDPHQSHGGADDVLGRRPRGRPP 60
           MA LDLG+RY                 FS+ DH DDDDDPHQ+ GG  DV+GRRPRGRPP
Sbjct: 1   MAGLDLGSRYLNHLQTGVDDPLNRGGHFSSGDH-DDDDDPHQTLGGPGDVVGRRPRGRPP 60

Query: 61  GSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNV 120
           GSKNKPKPPVIITRESANTLRVHILEV SGCDIFDCIAAYARRRQRGICILSGSGNV+NV
Sbjct: 61  GSKNKPKPPVIITRESANTLRVHILEVGSGCDIFDCIAAYARRRQRGICILSGSGNVTNV 120

Query: 121 GIRQPAAAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELT 180
           G+RQPA+AGAVLTL GRFEILSLSGSFLPPPAP  ATSLTIFLAGGQGQVVGGTVAGELT
Sbjct: 121 GLRQPASAGAVLTLQGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGTVAGELT 180

Query: 181 AAGPVILIVASFSNVAYERLPLDEEDQQQQVPVASGGVGGGGGG-------DNPFQDASN 237
           AAGPVILI ASF+NVAYERLPLDEED QQQ P  SGG GGG GG       +NPFQD SN
Sbjct: 181 AAGPVILIAASFTNVAYERLPLDEED-QQQAPTGSGGGGGGSGGGVGNNNNNNPFQDPSN 240

[Close]

BLAST of Carg23378 vs. ExPASy TrEMBL
Match: A0A6J1HMX3 (AT-hook motif nuclear-localized protein 23-like OS=Cucurbita maxima OX=3661 GN=LOC111465093 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 8.9e-104
Identity = 205/257 (79.77%), Postives = 216/257 (84.05%), Query Frame = 0


Query: 1   MAELDLGTRY-----------------FSAADHDDDDDDPHQSHGGADDVLGRRPRGRPP 60
           MA LDLG+RY                 FS+ DH DDDDDPHQ+ GG  DV+GRRPRGRPP
Sbjct: 1   MAGLDLGSRYLNHLQTGVDDPLNRGGHFSSGDH-DDDDDPHQTLGGPGDVVGRRPRGRPP 60

Query: 61  GSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNV 120
           GSKNKPKPPVIITRESANTLRVHILEV SGCDIFDCIAAYARRRQRGICILSGSGNV+NV
Sbjct: 61  GSKNKPKPPVIITRESANTLRVHILEVGSGCDIFDCIAAYARRRQRGICILSGSGNVTNV 120

Query: 121 GIRQPAAAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELT 180
           G+RQPA+AGAVLTL GRFEILSLSGSFLPPPAP  ATSLTIFLAGGQGQVVGGTVAGELT
Sbjct: 121 GLRQPASAGAVLTLQGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGTVAGELT 180

Query: 181 AAGPVILIVASFSNVAYERLPLDEEDQQQQVPVASGGVGGGG----GGDNPFQDASNSGV 237
           AAGPVILI ASF+NVAYERLPLDEED QQQ P  SGG GGGG      +NPFQD SNSG+
Sbjct: 181 AAGPVILIAASFTNVAYERLPLDEED-QQQAPTGSGGGGGGGVSNNNNNNPFQDPSNSGL 240

[Close]

BLAST of Carg23378 vs. ExPASy TrEMBL
Match: A0A6J1CW71 (AT-hook motif nuclear-localized protein OS=Momordica charantia OX=3673 GN=LOC111014852 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.3e-102
Identity = 203/262 (77.48%), Postives = 218/262 (83.21%), Query Frame = 0


Query: 1   MAELDLGTRYFS--------AADH----------DDDDDDPHQSHGGADDVLGRRPRGRP 60
           MA LDLG+RY +         A+H          D DDDDPHQ   G+ D++GRRPRGRP
Sbjct: 1   MAGLDLGSRYLAHLQTPGDDPANHGAHFSSGGGGDHDDDDPHQPFSGSGDIVGRRPRGRP 60

Query: 61  PGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSN 120
           PGSKNKPKPPVIITRESANTLRVHILEV SGCDIFDC+AAYARRRQRGICILSGSGNV+N
Sbjct: 61  PGSKNKPKPPVIITRESANTLRVHILEVGSGCDIFDCVAAYARRRQRGICILSGSGNVTN 120

Query: 121 VGIRQPAAAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGEL 180
           V +RQPAAAGAVLTLHGRFEILSLSGSFLPPPAP  ATSLTIFLAGGQGQVVGGTVAGEL
Sbjct: 121 VSLRQPAAAGAVLTLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGTVAGEL 180

Query: 181 TAAGPVILIVASFSNVAYERLPLDEEDQQQQVPV---ASGGVGGGGGG-----DNPFQDA 237
           TAAGPVILI ASF+NVAYERLPLDEEDQQQQ+ V   +SGG GG GGG     +NPFQD 
Sbjct: 181 TAAGPVILIAASFTNVAYERLPLDEEDQQQQLQVQQPSSGGGGGSGGGVSSNNNNPFQDP 240

[Close]

BLAST of Carg23378 vs. TAIR 10
Match: AT4G17800.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 307.8 bits (787), Expect = 7.7e-84
Identity = 157/212 (74.06%), Postives = 178/212 (83.96%), Query Frame = 0


Query: 27  HGGADDVLGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARR 86
           HGG  DV+GRRPRGRPPGSKNKPKPPVIITRESANTLR HILEV +GCD+FDC+A YARR
Sbjct: 73  HGGGGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVTNGCDVFDCVATYARR 132

Query: 87  RQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFL 146
           RQRGIC+LSGSG V+NV IRQP+AAGAV+TL G FEILSLSGSFLPPPAP  ATSLTIFL
Sbjct: 133 RQRGICVLSGSGTVTNVSIRQPSAAGAVVTLQGTFEILSLSGSFLPPPAPPGATSLTIFL 192

Query: 147 AGGQGQVVGGTVAGELTAAGPVILIVASFSNVAYERLPLDEEDQQQQVPVASGGVGGGGG 206
           AGGQGQVVGG+V GELTAAGPVI+I ASF+NVAYERLPL+E++QQQQ+       GG  G
Sbjct: 193 AGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEDEQQQQLG------GGSNG 252

Query: 207 GDNPFQDAS---NSGVPFLNYPLHMQ-NIQLP 235
           G N F + +     G+PF N P++MQ N+QLP
Sbjct: 253 GGNLFPEVAAGGGGGLPFFNLPMNMQPNVQLP 278

[Close]

BLAST of Carg23378 vs. TAIR 10
Match: AT2G35270.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 281.2 bits (718), Expect = 7.8e-76
Identity = 143/206 (69.42%), Postives = 165/206 (80.10%), Query Frame = 0


Query: 28  GGADDVLGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRR 87
           GG+ D++ RRPRGRP GSKNKPKPPVI+TRESANTLR HILEV SGCD+F+CI+ YARRR
Sbjct: 70  GGSGDLVMRRPRGRPAGSKNKPKPPVIVTRESANTLRAHILEVGSGCDVFECISTYARRR 129

Query: 88  QRGICILSGSGNVSNVGIRQPAAAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLA 147
           QRGIC+LSG+G V+NV IRQP AAGAV+TL G FEILSLSGSFLPPPAP  ATSLTIFLA
Sbjct: 130 QRGICVLSGTGTVTNVSIRQPTAAGAVVTLRGTFEILSLSGSFLPPPAPPGATSLTIFLA 189

Query: 148 GGQGQVVGGTVAGELTAAGPVILIVASFSNVAYERLPLDEEDQQQQVPVASGGVGGGGGG 207
           G QGQVVGG V GEL AAGPV+++ ASF+NVAYERLPLDE ++  Q        GGGGGG
Sbjct: 190 GAQGQVVGGNVVGELMAAGPVMVMAASFTNVAYERLPLDEHEEHLQ-------SGGGGGG 249

Query: 208 DNPFQDAS--NSGVPFLNYPLHMQNI 232
            N + +A+    G+PF N P+ M  I
Sbjct: 250 GNMYSEATGGGGGLPFFNLPMSMPQI 268

[Close]

BLAST of Carg23378 vs. TAIR 10
Match: AT4G12050.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 248.8 bits (634), Expect = 4.3e-66
Identity = 127/218 (58.26%), Postives = 164/218 (75.23%), Query Frame = 0


Query: 28  GGADDVLGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRR 87
           GG+ + + RRPRGRP GSKNKPK P+IITR+SAN LR H++E+  GCDI DC+A +ARRR
Sbjct: 110 GGSGEQMTRRPRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRR 169

Query: 88  QRGICILSGSGNVSNVGIRQPAA-AGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFL 147
           QRG+C++SG+G+V+NV IRQP +  G+V++LHGRFEILSLSGSFLPPPAP +AT L+++L
Sbjct: 170 QRGVCVMSGTGSVTNVTIRQPGSPPGSVVSLHGRFEILSLSGSFLPPPAPPAATGLSVYL 229

Query: 148 AGGQGQVVGGTVAGELTAAGPVILIVASFSNVAYERLPLDEEDQQQQVPVASGGVGGGGG 207
           AGGQGQVVGG+V G L  +GPV+++ ASFSN AYERLPL+E++ Q  V    GG GGGGG
Sbjct: 230 AGGQGQVVGGSVVGPLLCSGPVVVMAASFSNAAYERLPLEEDEMQTPVQGGGGGGGGGGG 289

Query: 208 -GDNPFQD--------ASNSGVPFLNYPLHMQNIQLPP 236
            G  P           A+  G+P    P  + ++QLPP
Sbjct: 290 MGSPPMMGQQQAMAAMAAAQGLP----PNLLGSVQLPP 323

[Close]

BLAST of Carg23378 vs. TAIR 10
Match: AT4G22810.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 238.0 bits (606), Expect = 7.5e-63
Identity = 116/182 (63.74%), Postives = 146/182 (80.22%), Query Frame = 0


Query: 29  GADDVLGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQ 88
           G D  + RRPRGRP GSKNKPKPP+IITR+SAN LR H++E+  GCD+ + +A +ARRRQ
Sbjct: 98  GGDHQMTRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEIGDGCDLVESVATFARRRQ 157

Query: 89  RGICILSGSGNVSNVGIRQPA---AAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIF 148
           RG+C++SG+GNV+NV IRQP    + G+V++LHGRFEILSLSGSFLPPPAP +AT L+++
Sbjct: 158 RGVCVMSGTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFLPPPAPPTATGLSVY 217

Query: 149 LAGGQGQVVGGTVAGELTAAGPVILIVASFSNVAYERLPLDEEDQQQQVPVASGGVGGGG 208
           LAGGQGQVVGG+V G L  AGPV+++ ASFSN AYERLPL+E++ Q  V       GGGG
Sbjct: 218 LAGGQGQVVGGSVVGPLLCAGPVVVMAASFSNAAYERLPLEEDEMQTPVH------GGGG 273

[Close]

BLAST of Carg23378 vs. TAIR 10
Match: AT2G45430.1 (AT-hook motif nuclear-localized protein 22 )

HSP 1 Score: 233.8 bits (595), Expect = 1.4e-61
Identity = 123/225 (54.67%), Postives = 156/225 (69.33%), Query Frame = 0


Query: 28  GGADDVLGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRR 87
           GG D+ + RRPRGRP GSKNKPKPP+IITR+SAN L+ H++EV +GCD+ + +  +ARRR
Sbjct: 81  GGGDNHITRRPRGRPAGSKNKPKPPIIITRDSANALKSHVMEVANGCDVMESVTVFARRR 140

Query: 88  QRGICILSGSGNVSNVGIRQPAA----AGAVLTLHGRFEILSLSGSFLPPPAPASATSLT 147
           QRGIC+LSG+G V+NV IRQPA+      +V+ LHGRFEILSLSGSFLPPPAP +A+ LT
Sbjct: 141 QRGICVLSGNGAVTNVTIRQPASVPGGGSSVVNLHGRFEILSLSGSFLPPPAPPAASGLT 200

Query: 148 IFLAGGQGQVVGGTVAGELTAAGPVILIVASFSNVAYERLPLDEEDQQQQVPVA-----S 207
           I+LAGGQGQVVGG+V G L A+GPV+++ ASF N AYERLPL+E+DQ++Q   A      
Sbjct: 201 IYLAGGQGQVVGGSVVGPLMASGPVVIMAASFGNAAYERLPLEEDDQEEQTAGAVANNID 260

Query: 208 GGVGGGGGGDNPFQDASNSGVPFLNYPLH---------MQNIQLP 235
           G    GGG     Q         +  P           M ++QLP
Sbjct: 261 GNATMGGGTQTQTQTQQQQQQQLMQDPTSFIQGLPPNLMNSVQLP 305

The following BLAST results are available for this feature:

BLAST of Carg23378 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7028276.1	2.8e-128	100.00	AT-hook motif nuclear-localized protein 21, partial [Cucurbita argyrosperma subs...	[more]
KAG6596740.1	1.4e-124	98.73	AT-hook motif nuclear-localized protein 21, partial [Cucurbita argyrosperma subs...	[more]
XP_022944488.1	1.3e-120	96.19	AT-hook motif nuclear-localized protein 23-like [Cucurbita moschata]	[more]
XP_023005523.1	2.4e-119	94.51	AT-hook motif nuclear-localized protein 23-like [Cucurbita maxima]	[more]
XP_023539505.1	3.1e-119	95.34	AT-hook motif nuclear-localized protein 23-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg23378 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23620	1.1e-82	74.06	AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O82166	1.1e-74	69.42	AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q9SZ70	6.0e-65	58.26	AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O49662	1.1e-61	63.74	AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O22130	2.0e-60	54.67	AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]

BLAST of Carg23378 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FY37	6.1e-121	96.19	AT-hook motif nuclear-localized protein 23-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1L2E7	1.2e-119	94.51	AT-hook motif nuclear-localized protein 23-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EBN1	4.0e-104	79.23	AT-hook motif nuclear-localized protein OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1HMX3	8.9e-104	79.77	AT-hook motif nuclear-localized protein 23-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1CW71	1.3e-102	77.48	AT-hook motif nuclear-localized protein OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of Carg23378 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17800.1	7.7e-84	74.06	Predicted AT-hook DNA-binding family protein	[more]
AT2G35270.1	7.8e-76	69.42	Predicted AT-hook DNA-binding family protein	[more]
AT4G12050.1	4.3e-66	58.26	Predicted AT-hook DNA-binding family protein	[more]
AT4G22810.1	7.5e-63	63.74	Predicted AT-hook DNA-binding family protein	[more]
AT2G45430.1	1.4e-61	54.67	AT-hook motif nuclear-localized protein 22	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 236..236
None	No IPR available	GENE3D	3.30.1330.80		coord: 63..196 e-value: 3.8E-25 score: 90.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..214
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54
None	No IPR available	PANTHER	PTHR31100:SF62	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23	coord: 23..235
None	No IPR available	SUPERFAMILY	117856	AF0104/ALDC/Ptd012-like	coord: 60..192
IPR005175	PPC domain	PFAM	PF03479	PCC	coord: 64..177 e-value: 1.3E-28 score: 99.5
IPR005175	PPC domain	PROSITE	PS51742	PPC	coord: 60..197 score: 39.19614
IPR005175	PPC domain	CDD	cd11378	DUF296	coord: 64..175 e-value: 2.71066E-22 score: 86.1002
IPR014476	AT-hook motif nuclear-localized protein 15-29	PANTHER	PTHR31100	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15	coord: 23..235

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23378-RA	Carg23378-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003680	minor groove of adenine-thymine-rich DNA binding