Carg23367 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23367
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	GPI-anchored protein
Location	Carg_Chr01: 8869703 .. 8870221 (-)
RNA-Seq Expression	Carg23367
Synteny	Carg23367

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCCCATCGATGCTCCTCCCTCTTCCTTCTCCTCTTTCTTTCCAGAAGTTGGCTACTTATGTTCAAATTTATTTGTTCGTTGCTTCAAAATCGGGAGATTTTTGGTCTGATTTCCTTTGTAATTGCAGAGCATATCATTGGATCTACAAGTCTCACCACTCGTACAATTCTTCAAGTCAAAAAAGGTTCGATACAATTATTAGTTTGAGATTTTAATTGTATCAAAACTAAGTAGTGGATGAATGCAGCTTGTCCAGTGAATTTTGAAGTTGCGAACTACACCATCATCACAAGCAAGTGCAAGGGGCCTAAATACACAGCCAATCTTTGCTGCTCAGCTCTTGCAGAATTTGAGTGCCCCTATGCCAAATATCTGAATCATTTAACCAATAATTGTGCTTCAACTATGTTCACTTATATTAATCTGTATGGAAACTATCCTCCTGGCCTCTTTTCCACCCTCTGCATAGGAAAAGGCAGAAAAGGGGGCCTTCAATGCCCTAAAGCTAATTGA

mRNA sequence

ATGGAGTCCCATCGATGCTCCTCCCTCTTCCTTCTCCTCTTTCTTTCCAGAAGTTGGCTACTTATGTTCAAATTTATTTGTTCGTTGCTTCAAAATCGGGAGATTTTTGGTCTGATTTCCTTTGTAATTGCAGAGCATATCATTGGATCTACAAGTCTCACCACTCGTACAATTCTTCAAGTCAAAAAAGCTTGTCCAGTGAATTTTGAAGTTGCGAACTACACCATCATCACAAGCAAGTGCAAGGGGCCTAAATACACAGCCAATCTTTGCTGCTCAGCTCTTGCAGAATTTGAGTGCCCCTATGCCAAATATCTGAATCATTTAACCAATAATTGTGCTTCAACTATGTTCACTTATATTAATCTGTATGGAAACTATCCTCCTGGCCTCTTTTCCACCCTCTGCATAGGAAAAGGCAGAAAAGGGGGCCTTCAATGCCCTAAAGCTAATTGA

Coding sequence (CDS)

ATGGAGTCCCATCGATGCTCCTCCCTCTTCCTTCTCCTCTTTCTTTCCAGAAGTTGGCTACTTATGTTCAAATTTATTTGTTCGTTGCTTCAAAATCGGGAGATTTTTGGTCTGATTTCCTTTGTAATTGCAGAGCATATCATTGGATCTACAAGTCTCACCACTCGTACAATTCTTCAAGTCAAAAAAGCTTGTCCAGTGAATTTTGAAGTTGCGAACTACACCATCATCACAAGCAAGTGCAAGGGGCCTAAATACACAGCCAATCTTTGCTGCTCAGCTCTTGCAGAATTTGAGTGCCCCTATGCCAAATATCTGAATCATTTAACCAATAATTGTGCTTCAACTATGTTCACTTATATTAATCTGTATGGAAACTATCCTCCTGGCCTCTTTTCCACCCTCTGCATAGGAAAAGGCAGAAAAGGGGGCCTTCAATGCCCTAAAGCTAATTGA

Protein sequence

MESHRCSSLFLLLFLSRSWLLMFKFICSLLQNREIFGLISFVIAEHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFECPYAKYLNHLTNNCASTMFTYINLYGNYPPGLFSTLCIGKGRKGGLQCPKAN

Homology

[Close]

BLAST of Carg23367 vs. NCBI nr
Match: KAG7037290.1 (GPI-anchored protein LLG1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 310.1 bits (793), Expect = 1.1e-80
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MESHRCSSLFLLLFLSRSWLLMFKFICSLLQNREIFGLISFVIAEHIIGSTSLTTRTILQ 60
           MESHRCSSLFLLLFLSRSWLLMFKFICSLLQNREIFGLISFVIAEHIIGSTSLTTRTILQ
Sbjct: 1   MESHRCSSLFLLLFLSRSWLLMFKFICSLLQNREIFGLISFVIAEHIIGSTSLTTRTILQ 60

Query: 61  VKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFECPYAKYLNHLTNNCASTMFTY 120
           VKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFECPYAKYLNHLTNNCASTMFTY
Sbjct: 61  VKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFECPYAKYLNHLTNNCASTMFTY 120

Query: 121 INLYGNYPPGLFSTLCIGKGRKGGLQCPKAN 152
           INLYGNYPPGLFSTLCIGKGRKGGLQCPKAN
Sbjct: 121 INLYGNYPPGLFSTLCIGKGRKGGLQCPKAN 151

[Close]

BLAST of Carg23367 vs. NCBI nr
Match: XP_023524003.1 (GPI-anchored protein LLG1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 231.9 bits (590), Expect = 3.7e-57
Identity = 119/151 (78.81%), Postives = 123/151 (81.46%), Query Frame = 0


Query: 1   MESHRCSSLFLLLFLSRSWLLMFKFICSLLQNREIFGLISFVIAEHIIGSTSLTTRTILQ 60
           MESHRCSSLFLLLFLS    ++F               +    +EHIIGSTSLTTRTILQ
Sbjct: 4   MESHRCSSLFLLLFLS----ILF---------------VGAFASEHIIGSTSLTTRTILQ 63

Query: 61  VKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFECPYAKYLNHLTNNCASTMFTY 120
            KKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEF CPYAKYLN LTNNCASTMFTY
Sbjct: 64  AKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFACPYAKYLNDLTNNCASTMFTY 123

Query: 121 INLYGNYPPGLFSTLCIGKGRKGGLQCPKAN 152
           INLYG YPPGLFSTLC GKGRKGGLQCPKAN
Sbjct: 124 INLYGKYPPGLFSTLCKGKGRKGGLQCPKAN 135

[Close]

BLAST of Carg23367 vs. NCBI nr
Match: XP_022981660.1 (GPI-anchored protein LLG1-like [Cucurbita maxima])

HSP 1 Score: 163.7 bits (413), Expect = 1.2e-36
Identity = 89/130 (68.46%), Postives = 92/130 (70.77%), Query Frame = 0


Query: 1   MESHRCSSLFLLLFLSRSWLLMFKFICSLLQNREIFGLISFVIAEHIIGSTSLTTRTILQ 60
           MESHRCSSLFLLLFLS                      I FV A     S  +   TILQ
Sbjct: 4   MESHRCSSLFLLLFLS----------------------ILFVGA---FASGHIFESTILQ 63

Query: 61  VKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFECPYAKYLNHLTNNCASTMFTY 120
           V+KACPVNFEVANYTIIT KCKGPKYTAN+CCSALAEF CPYAKYLN LTNNCASTMFTY
Sbjct: 64  VQKACPVNFEVANYTIITGKCKGPKYTANICCSALAEFACPYAKYLNDLTNNCASTMFTY 108

Query: 121 INLYGNYPPG 131
           INLYG YPPG
Sbjct: 124 INLYGKYPPG 108

[Close]

BLAST of Carg23367 vs. NCBI nr
Match: RWR95074.1 (GPI-anchored protein LLG1-like protein [Cinnamomum micranthum f. kanehirae])

HSP 1 Score: 149.4 bits (376), Expect = 2.4e-32
Identity = 73/136 (53.68%), Postives = 96/136 (70.59%), Query Frame = 0


Query: 13  LFLSRSWLLMFKFICSLLQNREIFGLISFVIAEHIIGSTSLTTRTILQVKKACPVNFEVA 72
           ++L RS+L +F F+ S      +F + +F  A+ ++GS   T R +L+VK ACPVNFE  
Sbjct: 1   MWLERSFLAIF-FVLS-----TVFAVSTFTTADEVLGSRGSTARNLLEVKTACPVNFESL 60

Query: 73  NYTIITSKCKGPKYTANLCCSALAEFECPYAKYLNHLTNNCASTMFTYINLYGNYPPGLF 132
           NYT+ITS+CK PKY+A  CC A  EF CPYA  LN++TN+CASTMF+YINLYG YPPGLF
Sbjct: 61  NYTVITSQCKAPKYSATPCCKAFKEFACPYADLLNNVTNDCASTMFSYINLYGKYPPGLF 120

Query: 133 STLCIGKGRKGGLQCP 149
           ++ C  +   GGL CP
Sbjct: 121 ASKC--RSANGGLDCP 128

[Close]

BLAST of Carg23367 vs. NCBI nr
Match: XP_031105626.1 (GPI-anchored protein LLG1-like [Ipomoea triloba])

HSP 1 Score: 149.1 bits (375), Expect = 3.2e-32
Identity = 67/106 (63.21%), Postives = 80/106 (75.47%), Query Frame = 0


Query: 43  IAEHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFECPY 102
           I++ +  S S T R +LQ KKACP+NFE  NYT+ITS+CKGP+Y   LCC A  EF CPY
Sbjct: 29  ISDGVFVSQSSTGRNLLQAKKACPINFEFQNYTVITSQCKGPQYPPKLCCGAFTEFACPY 88

Query: 103 AKYLNHLTNNCASTMFTYINLYGNYPPGLFSTLCIGKGRKGGLQCP 149
           A+YLN LTN CA+TMF+YINLYG YPPGLF+  C  KG K GL+CP
Sbjct: 89  AEYLNDLTNYCAATMFSYINLYGKYPPGLFANEC--KGNKNGLECP 132

[Close]

BLAST of Carg23367 vs. ExPASy Swiss-Prot
Match: Q9FKT1 (GPI-anchored protein LLG1 OS=Arabidopsis thaliana OX=3702 GN=LLG1 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.2e-29
Identity = 73/135 (54.07%), Postives = 89/135 (65.93%), Query Frame = 0


Query: 15  LSRSWLLMFKFICSLLQNREIFGLISFVIAEHIIGSTSLTT-RTILQVKKACPVNFEVAN 74
           LSR+  L F  + S+L +   F   SF I++ +  S SL   R +LQ KK CPVNFE  N
Sbjct: 4   LSRA--LFFFLLLSVLSS---FSSSSF-ISDGVFESQSLVLGRNLLQTKKTCPVNFEFMN 63

Query: 75  YTIITSKCKGPKYTANLCCSALAEFECPYAKYLNHLTNNCASTMFTYINLYGNYPPGLFS 134
           YTIITSKCKGPKY    CC A  +F CPY   LN L+++CA+TMF+YINLYG YPPGLF+
Sbjct: 64  YTIITSKCKGPKYPPKECCGAFKDFACPYTDQLNDLSSDCATTMFSYINLYGKYPPGLFA 123

Query: 135 TLCIGKGRKGGLQCP 149
             C  K  K GL+CP
Sbjct: 124 NQC--KEGKEGLECP 130

[Close]

BLAST of Carg23367 vs. ExPASy Swiss-Prot
Match: Q6NLF4 (GPI-anchored protein LLG2 OS=Arabidopsis thaliana OX=3702 GN=LLG2 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.2e-27
Identity = 60/119 (50.42%), Postives = 77/119 (64.71%), Query Frame = 0


Query: 29  LLQNREIFGLISFVIAEHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTA 88
           LL    IF L  F ++       + T+R +LQ +  C  +F   NYTIITS+CKGP Y A
Sbjct: 8   LLSLLPIFLLSGFSLSYDEFDGHAATSRALLQTRTTCKEDFANKNYTIITSRCKGPNYPA 67

Query: 89  NLCCSALAEFECPYAKYLNHLTNNCASTMFTYINLYGNYPPGLFSTLCIGKGRKGGLQC 148
           N+CCSA  +F CP+A+ LN   N+CASTMF+YINLYG YPPG+F+ +C  K  K GL C
Sbjct: 68  NVCCSAFKDFACPFAEVLNDEKNDCASTMFSYINLYGRYPPGIFANMC--KEGKEGLDC 124

[Close]

BLAST of Carg23367 vs. ExPASy Swiss-Prot
Match: Q9M0I0 (GPI-anchored protein LLG3 OS=Arabidopsis thaliana OX=3702 GN=LLG3 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.7e-26
Identity = 59/114 (51.75%), Postives = 72/114 (63.16%), Query Frame = 0


Query: 38  LISFVIAEHI----IGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCS 97
           L  F  + HI      S   T+R +LQ K  C  +F   NYTIITSKCKGP Y A +CCS
Sbjct: 17  LSGFAFSHHISLDEFESHPSTSRALLQAKATCKEDFAAKNYTIITSKCKGPNYPAKVCCS 76

Query: 98  ALAEFECPYAKYLNHLTNNCASTMFTYINLYGNYPPGLFSTLCIGKGRKGGLQC 148
           A  +F CP+A+ LN    +CASTMF+YINLYG YPPG+F+ +C  K  K GL C
Sbjct: 77  AFKDFACPFAEVLNDEKTDCASTMFSYINLYGRYPPGIFANMC--KEGKEGLDC 128

[Close]

BLAST of Carg23367 vs. ExPASy Swiss-Prot
Match: B3GS44 (GPI-anchored protein LORELEI OS=Arabidopsis thaliana OX=3702 GN=LRE PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.9e-25
Identity = 57/129 (44.19%), Postives = 80/129 (62.02%), Query Frame = 0


Query: 20  LLMFKFICSLLQNREIFGLISFVIAEHIIGSTSLTTRTILQVKKACPVNFEVANYTIITS 79
           +L+F F+ +LL +      IS  + E     TS++ R +   KK C VNFE  +Y ++T 
Sbjct: 4   ILLFFFLMALLVSLSSSSSISDGVFE---SQTSVSGRNLRHAKKKCEVNFEYMDYKVLTK 63

Query: 80  KCKGPKYTANLCCSALAEFECPYAKYLNHLTNNCASTMFTYINLYGNYPPGLFSTLCIGK 139
           +CKGP + A  CCSA  EF CPY   +N + ++CA TMF+Y+N+YGNYP GLF+  C  +
Sbjct: 64  RCKGPAFPAKECCSAFKEFACPYVSQINDMNSDCAQTMFSYMNIYGNYPTGLFANEC--R 123

Query: 140 GRKGGLQCP 149
            RK GL CP
Sbjct: 124 ERKDGLVCP 127

[Close]

BLAST of Carg23367 vs. ExPASy TrEMBL
Match: A0A6J1J052 (GPI-anchored protein LLG1-like OS=Cucurbita maxima OX=3661 GN=LOC111480716 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 6.0e-37
Identity = 89/130 (68.46%), Postives = 92/130 (70.77%), Query Frame = 0


Query: 1   MESHRCSSLFLLLFLSRSWLLMFKFICSLLQNREIFGLISFVIAEHIIGSTSLTTRTILQ 60
           MESHRCSSLFLLLFLS                      I FV A     S  +   TILQ
Sbjct: 4   MESHRCSSLFLLLFLS----------------------ILFVGA---FASGHIFESTILQ 63

Query: 61  VKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFECPYAKYLNHLTNNCASTMFTY 120
           V+KACPVNFEVANYTIIT KCKGPKYTAN+CCSALAEF CPYAKYLN LTNNCASTMFTY
Sbjct: 64  VQKACPVNFEVANYTIITGKCKGPKYTANICCSALAEFACPYAKYLNDLTNNCASTMFTY 108

Query: 121 INLYGNYPPG 131
           INLYG YPPG
Sbjct: 124 INLYGKYPPG 108

[Close]

BLAST of Carg23367 vs. ExPASy TrEMBL
Match: A0A3S3NV85 (GPI-anchored protein LLG1-like protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_02439800 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.2e-32
Identity = 73/136 (53.68%), Postives = 96/136 (70.59%), Query Frame = 0


Query: 13  LFLSRSWLLMFKFICSLLQNREIFGLISFVIAEHIIGSTSLTTRTILQVKKACPVNFEVA 72
           ++L RS+L +F F+ S      +F + +F  A+ ++GS   T R +L+VK ACPVNFE  
Sbjct: 1   MWLERSFLAIF-FVLS-----TVFAVSTFTTADEVLGSRGSTARNLLEVKTACPVNFESL 60

Query: 73  NYTIITSKCKGPKYTANLCCSALAEFECPYAKYLNHLTNNCASTMFTYINLYGNYPPGLF 132
           NYT+ITS+CK PKY+A  CC A  EF CPYA  LN++TN+CASTMF+YINLYG YPPGLF
Sbjct: 61  NYTVITSQCKAPKYSATPCCKAFKEFACPYADLLNNVTNDCASTMFSYINLYGKYPPGLF 120

Query: 133 STLCIGKGRKGGLQCP 149
           ++ C  +   GGL CP
Sbjct: 121 ASKC--RSANGGLDCP 128

[Close]

BLAST of Carg23367 vs. ExPASy TrEMBL
Match: A0A2G9HUZ3 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05954 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.5e-32
Identity = 71/109 (65.14%), Postives = 84/109 (77.06%), Query Frame = 0


Query: 40  SFVIAEHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFE 99
           S  I++ I GS+ L  R +LQ KK CPVNFE  NYTIITSKCKGP+Y  +LCCSA  EF 
Sbjct: 26  STFISDGIFGSSVLGERRLLQAKKPCPVNFEFQNYTIITSKCKGPQYLPDLCCSAFKEFA 85

Query: 100 CPYAKYLNHLTNNCASTMFTYINLYGNYPPGLFSTLCIGKGRKGGLQCP 149
           CPYA+ LN LTN+CASTMF+YINLYG YPPGLF++ C  +G K GL+CP
Sbjct: 86  CPYAEELNDLTNDCASTMFSYINLYGKYPPGLFASEC--RGGKFGLECP 132

[Close]

BLAST of Carg23367 vs. ExPASy TrEMBL
Match: A0A022QHV5 (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a014908mg PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 2.6e-32
Identity = 68/109 (62.39%), Postives = 84/109 (77.06%), Query Frame = 0


Query: 40  SFVIAEHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSALAEFE 99
           S  I++ + GS+ L+ R +LQ KK CPVNFE  NYTIITSKCKGP+Y  NLCCSA  +F 
Sbjct: 25  STFISDGVFGSSVLSERRLLQAKKPCPVNFEFQNYTIITSKCKGPQYPPNLCCSAFKDFS 84

Query: 100 CPYAKYLNHLTNNCASTMFTYINLYGNYPPGLFSTLCIGKGRKGGLQCP 149
           CP+A  LN LTN+CASTMF+YINLYG YPPGLF+++C  +  K GL+CP
Sbjct: 85  CPFADELNDLTNDCASTMFSYINLYGKYPPGLFASMC--REGKDGLECP 131

[Close]

BLAST of Carg23367 vs. ExPASy TrEMBL
Match: A2PZD8 (GPI-anchored protein OS=Ipomoea nil OX=35883 GN=In10 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 3.4e-32
Identity = 81/143 (56.64%), Postives = 94/143 (65.73%), Query Frame = 0


Query: 6   CSSLFLLLFLSRSWLLMFKFICSLLQNREIFGLISFVIAEHIIGSTSLTTRTILQVKKAC 65
           C S FLLL LS     +F    S           S  I++ +  S S T R++LQ KKAC
Sbjct: 8   CLSFFLLLSLS-----LFAGFSS-----------SSSISDGVFVSQSSTGRSLLQAKKAC 67

Query: 66  PVNFEVANYTIITSKCKGPKYTANLCCSALAEFECPYAKYLNHLTNNCASTMFTYINLYG 125
           PVNFEV NYT+ITS+CKGP+Y   LCC A  EF CPYA+YLN LTN+CASTMF+YINLYG
Sbjct: 68  PVNFEVQNYTVITSQCKGPQYPPKLCCGAFTEFACPYAEYLNDLTNDCASTMFSYINLYG 127

Query: 126 NYPPGLFSTLCIGKGRKGGLQCP 149
            YPPGLF+  C  KG K GL CP
Sbjct: 128 KYPPGLFANEC--KGDKLGLACP 132

[Close]

BLAST of Carg23367 vs. TAIR 10
Match: AT5G56170.1 (LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 )

HSP 1 Score: 131.0 bits (328), Expect = 8.3e-31
Identity = 73/135 (54.07%), Postives = 89/135 (65.93%), Query Frame = 0


Query: 15  LSRSWLLMFKFICSLLQNREIFGLISFVIAEHIIGSTSLTT-RTILQVKKACPVNFEVAN 74
           LSR+  L F  + S+L +   F   SF I++ +  S SL   R +LQ KK CPVNFE  N
Sbjct: 4   LSRA--LFFFLLLSVLSS---FSSSSF-ISDGVFESQSLVLGRNLLQTKKTCPVNFEFMN 63

Query: 75  YTIITSKCKGPKYTANLCCSALAEFECPYAKYLNHLTNNCASTMFTYINLYGNYPPGLFS 134
           YTIITSKCKGPKY    CC A  +F CPY   LN L+++CA+TMF+YINLYG YPPGLF+
Sbjct: 64  YTIITSKCKGPKYPPKECCGAFKDFACPYTDQLNDLSSDCATTMFSYINLYGKYPPGLFA 123

Query: 135 TLCIGKGRKGGLQCP 149
             C  K  K GL+CP
Sbjct: 124 NQC--KEGKEGLECP 130

[Close]

BLAST of Carg23367 vs. TAIR 10
Match: AT2G20700.1 (LORELEI-LIKE-GPI ANCHORED PROTEIN 2 )

HSP 1 Score: 122.9 bits (307), Expect = 2.3e-28
Identity = 60/119 (50.42%), Postives = 77/119 (64.71%), Query Frame = 0


Query: 29  LLQNREIFGLISFVIAEHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTA 88
           LL    IF L  F ++       + T+R +LQ +  C  +F   NYTIITS+CKGP Y A
Sbjct: 8   LLSLLPIFLLSGFSLSYDEFDGHAATSRALLQTRTTCKEDFANKNYTIITSRCKGPNYPA 67

Query: 89  NLCCSALAEFECPYAKYLNHLTNNCASTMFTYINLYGNYPPGLFSTLCIGKGRKGGLQC 148
           N+CCSA  +F CP+A+ LN   N+CASTMF+YINLYG YPPG+F+ +C  K  K GL C
Sbjct: 68  NVCCSAFKDFACPFAEVLNDEKNDCASTMFSYINLYGRYPPGIFANMC--KEGKEGLDC 124

[Close]

BLAST of Carg23367 vs. TAIR 10
Match: AT4G28280.2 (LORELEI-LIKE-GPI ANCHORED PROTEIN 3 )

HSP 1 Score: 119.8 bits (299), Expect = 1.9e-27
Identity = 59/114 (51.75%), Postives = 72/114 (63.16%), Query Frame = 0


Query: 38  LISFVIAEHI----IGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCS 97
           L  F  + HI      S   T+R +LQ K  C  +F   NYTIITSKCKGP Y A +CCS
Sbjct: 17  LSGFAFSHHISLDEFESHPSTSRALLQAKATCKEDFAAKNYTIITSKCKGPNYPAKVCCS 76

Query: 98  ALAEFECPYAKYLNHLTNNCASTMFTYINLYGNYPPGLFSTLCIGKGRKGGLQC 148
           A  +F CP+A+ LN    +CASTMF+YINLYG YPPG+F+ +C  K  K GL C
Sbjct: 77  AFKDFACPFAEVLNDEKTDCASTMFSYINLYGRYPPGIFANMC--KEGKEGLDC 128

[Close]

BLAST of Carg23367 vs. TAIR 10
Match: AT4G26466.1 (lorelei )

HSP 1 Score: 115.9 bits (289), Expect = 2.8e-26
Identity = 57/129 (44.19%), Postives = 80/129 (62.02%), Query Frame = 0


Query: 20  LLMFKFICSLLQNREIFGLISFVIAEHIIGSTSLTTRTILQVKKACPVNFEVANYTIITS 79
           +L+F F+ +LL +      IS  + E     TS++ R +   KK C VNFE  +Y ++T 
Sbjct: 4   ILLFFFLMALLVSLSSSSSISDGVFE---SQTSVSGRNLRHAKKKCEVNFEYMDYKVLTK 63

Query: 80  KCKGPKYTANLCCSALAEFECPYAKYLNHLTNNCASTMFTYINLYGNYPPGLFSTLCIGK 139
           +CKGP + A  CCSA  EF CPY   +N + ++CA TMF+Y+N+YGNYP GLF+  C  +
Sbjct: 64  RCKGPAFPAKECCSAFKEFACPYVSQINDMNSDCAQTMFSYMNIYGNYPTGLFANEC--R 123

Query: 140 GRKGGLQCP 149
            RK GL CP
Sbjct: 124 ERKDGLVCP 127

[Close]

BLAST of Carg23367 vs. TAIR 10
Match: AT4G28280.1 (LORELEI-LIKE-GPI ANCHORED PROTEIN 3 )

HSP 1 Score: 112.1 bits (279), Expect = 4.0e-25
Identity = 55/113 (48.67%), Postives = 69/113 (61.06%), Query Frame = 0


Query: 35  IFGLISFVIAEHIIGSTSLTTRTILQVKKACPVNFEVANYTIITSKCKGPKYTANLCCSA 94
           I  LIS +  +H +            +  AC  +F   NYTIITSKCKGP Y A +CCSA
Sbjct: 2   IISLISKIFHDHYVN----------DILTACKEDFAAKNYTIITSKCKGPNYPAKVCCSA 61

Query: 95  LAEFECPYAKYLNHLTNNCASTMFTYINLYGNYPPGLFSTLCIGKGRKGGLQC 148
             +F CP+A+ LN    +CASTMF+YINLYG YPPG+F+ +C  K  K GL C
Sbjct: 62  FKDFACPFAEVLNDEKTDCASTMFSYINLYGRYPPGIFANMC--KEGKEGLDC 102

The following BLAST results are available for this feature:

BLAST of Carg23367 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037290.1	1.1e-80	100.00	GPI-anchored protein LLG1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023524003.1	3.7e-57	78.81	GPI-anchored protein LLG1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022981660.1	1.2e-36	68.46	GPI-anchored protein LLG1-like [Cucurbita maxima]	[more]
RWR95074.1	2.4e-32	53.68	GPI-anchored protein LLG1-like protein [Cinnamomum micranthum f. kanehirae]	[more]
XP_031105626.1	3.2e-32	63.21	GPI-anchored protein LLG1-like [Ipomoea triloba]	[more]

BLAST of Carg23367 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKT1	1.2e-29	54.07	GPI-anchored protein LLG1 OS=Arabidopsis thaliana OX=3702 GN=LLG1 PE=1 SV=1	[more]
Q6NLF4	3.2e-27	50.42	GPI-anchored protein LLG2 OS=Arabidopsis thaliana OX=3702 GN=LLG2 PE=1 SV=1	[more]
Q9M0I0	2.7e-26	51.75	GPI-anchored protein LLG3 OS=Arabidopsis thaliana OX=3702 GN=LLG3 PE=2 SV=1	[more]
B3GS44	3.9e-25	44.19	GPI-anchored protein LORELEI OS=Arabidopsis thaliana OX=3702 GN=LRE PE=1 SV=1	[more]

BLAST of Carg23367 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J052	6.0e-37	68.46	GPI-anchored protein LLG1-like OS=Cucurbita maxima OX=3661 GN=LOC111480716 PE=4 ...	[more]
A0A3S3NV85	1.2e-32	53.68	GPI-anchored protein LLG1-like protein OS=Cinnamomum micranthum f. kanehirae OX=...	[more]
A0A2G9HUZ3	1.5e-32	65.14	Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05954 P...	[more]
A0A022QHV5	2.6e-32	62.39	Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a014908mg PE...	[more]
A2PZD8	3.4e-32	56.64	GPI-anchored protein OS=Ipomoea nil OX=35883 GN=In10 PE=2 SV=1	[more]

BLAST of Carg23367 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56170.1	8.3e-31	54.07	LORELEI-LIKE-GPI-ANCHORED PROTEIN 1	[more]
AT2G20700.1	2.3e-28	50.42	LORELEI-LIKE-GPI ANCHORED PROTEIN 2	[more]
AT4G28280.2	1.9e-27	51.75	LORELEI-LIKE-GPI ANCHORED PROTEIN 3	[more]
AT4G26466.1	2.8e-26	44.19	lorelei	[more]
AT4G28280.1	4.0e-25	48.67	LORELEI-LIKE-GPI ANCHORED PROTEIN 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039307	GPI-anchored protein LORELEI-like	PANTHER	PTHR31533	GPI-ANCHORED PROTEIN LLG1-RELATED-RELATED	coord: 36..150
None	No IPR available	PANTHER	PTHR31533:SF2	GPI-ANCHORED PROTEIN LLG1-RELATED	coord: 36..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23367-RA	Carg23367-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane