Carg23326 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg23326
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like
LocationCarg_Chr06: 10467702 .. 10470885 (+)
RNA-Seq ExpressionCarg23326
SyntenyCarg23326
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTATGGTTTAAAATAATTTATGAAATTAAAAGGCTATGGAAATGACCAATATACCCTTCAGAAATGAAGAAATTAACCTATGGTACCCTTTTGAAAATGGACAATAAATAAATGAAGGCAATGTTGGTGTGTTTTCTTACTAATTGTCCGGTAGGCATTTGGGAGAGTGGGGGTTCATTCATCTGAGTCAAGAGAGCACGAACGGCTAGAGGAACAGAAATGGCATGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGGATCTTGTTCTGCCAAACCTCTCCTTCAAGTGCTCCCGCTAGGTATTCATTTTCTGCTTTCTCCTTCTCTTTGCGATCCCTTCTAAAAACAACAAATCCTGCTCCCTGAGCTTATTCTCACAAATTGTTGATTAATGGAGTTTCGGCTCTGACAGGACGTTTGTGGAAAAGAATTACAAGGACCTCAAGACTTTGAATCCCAAATTTCCTATATTGATCCGCGAATGCACTGGAGTCGAGCCGCAATTATGGGCTAGATATGGTACTTCACCCCCAATCATTTCACATTTCGTTTTATTCTCTTCTCTCTATATTTCGAGATTTATTCGGGCTTTGCTCGTCTTTGCTCCACATTCTTTTCATGTTGTTAATGATATGACGAAAAGGATTTTGCTGCTATACTGAAGCACGATTTCCTTTTGGGTTTATTTCGTCAAGCTTTGCAATTTTCTTTCTTTTCTTTTGTGAGCTGTGAAATTTACTGGTCCTGTGGTGGTTACAATGAGGGTGACGTTTACGTTCAGATTGTTTATGATTTTGTATGAATCATATTGCGTCATGTTAATGCTGTAAGTTTTTCATTTATAATCTCAGGTTTTTTAATGTTCGGTTTCCTCAATATGTATGTTAATGCCCTTCGAGTATTACACTTTTATTACCTGCTTTCATTATTCTAGATGATTGATTTGTTCACTTAACGGTCTTTAAGATTTAGAACCATTAATCTTCATTGGGATGCTTTTATCTTTCCTTTTTTTTTAATCAAATTTTTATTATTTTTTGAGTTTATGGATTTTGTATCTTTGAGCATTAAGAAACAAGCTTGTTAAAGCACTCTCTCTGGACATTCATTTCGTTATATGGATGCACCTAATTCGGGCCTTTTTAGTGGACTACTTGGGAGGAGCACAATAGTCGGATCTTCAAAGAAAAGGGAAGTTCTTTTGATAGTTTTTCTGAAAAATTATCTTCTTGCAATGACTGGGTGTCAATGCACATCTTATTTTAGCTTTTATAGCCTCTGTACAAAAGGTACGGGCTACATCAGGCGTCTACTTGGAAGGTTAACCCCTATACAAAAAGAAATTAAGACATTCATCTACCTTTAGTTATGATCCTCAAAAATTTTGGGTCGATTCTCTCAATGACTTGAATGTACCCAGCAACGCTACCGTAATCTTCCTGTCAAATTATTATGACCCATTAAATTGTTTTGACATGGTGGACTTGAAAGGATTCATGTCTTATGTTATTTGCAAGAAATAAATAACATGGACTCAAGAATGAGAGTTTAACTAGAAATTTGTTGAAGTTAGGTTTGTTTTTCTCACTAACACTAAATGAACTCACTGTTATTTATTACCTCATGAAGAACCACAATTATTTATCAAAATATCAAGACCTGTCCATTCCTTCTTTTTTCTTTTTTCTTTTTTCTTTGTTTTTTTATCAAGAAGATGTCAAGGATGATGAAGTTAAGTTTTCTTTGAGCTTGGATATCCTCAGATATTTTAAAACTTTTTGATAAAGAATGCCAAATCTGTAGAATCTGTAACTGATGATCCATGGGGCAGGAGGAATATATAGGGCGATGAAAGAAACTTCATGTGAACCTGGGGAAAATGTAGATATTGAGATTTTTCCTTTAATTTTATCAGAAATGTTAATGATTCCTTTAAGTAGCTCCCAAATTAAAATTTTGAACTTCTATGGATTTCTGTTTCTAGCCATTCAAACGTATTTGCATATGTTGGGTTTAAGGATTCCAGAATCCTCTGTGACGTTATTCAAAAGACATTTGCAGACAAATGATCTGTGTCATAAAGCCACAACCACTTGTCTTCCACGGGCCTGGCCATTAATTTAACAAGGGTATCTATAAGAGAAATCCGTTCTTGGGTCTCCAAATCATTAAAGTTTCTTCCGAAGTGTAGGTCCAAGAAATTTTGGTTGAGTTCCATAATTCACTTGTAGGAAAGCGTTTGGAACAACGTTAATTCAGGGAGGAATGGCAGCGAGAGCTACTTTTTTTTTTTTTTTTTTCTCAGGACCTAGTGTTTGCTCAATACCTTACATAATAGTTTCTCTTGAAACCAATACCTCTTTCTGTTCGAGAGTGACTTTCTAAGGGGCCTTTGGTGGTTTTGGTGGCAGTATGTCTGGAACACCAATCACTTTTGGAACTCCATATTGTTTAAGCTAGTTATCAAATAAAGTTATTAATGGACTTCAATGCCTATTGAACTTCAAGAACATAAACGAGGCTGTAGAAGAGTGAAAAGTGGAAAAAAGGAGGGCTTTTTACTGAAAATTAACATAGAGGAAGCTTGTGATGATGGAGAATGCAAGATTTTGGTTCAAGATGGAGGCTATGGATTCACACTTCTGATCAACAATTGTCGGGATTATCATCTGAAAATTGGAAGTGGAGGATGTGCTTTGGTTTGGCCTGATCATAGGACAATTGGTGAACGATAGTATATGTTTCTTATGAATGCTAATATCTTGCAAGTGTTTGACGTTAATAGCCATAACATTAGATAAATTTTTTTTAGAAGGATCAATCATTTCCTGAGATTTGGAGGTTATGTGATTGCAATATGCTTCTTATATGTTCGTCTTTGGTTAATGCAGCTGATTACTCTTTCTTTTTCTTTTTGGTTCAATAGATATGGGTGTTGAGAGGGTTGCTCGTTTAGAGGGTTTGAGCGAGGCACAGATCTCCAAGGCACTCGAAGACCTAGTAAAAGTTGGGGCATCCTGAAGGAGTAGTAATCTGCTGTGCTATTGTACTTGCAACAGACGTTAATAAATGCACGAGAGAAACTTCTGTGGAGATGCTTTTCTGTTTACATTCTATTCGCTCTTTTTTTTTTTTTTTTTTTCTTTGAGATTATTGCTCAAATACTCAGCTTGAGC

mRNA sequence

TTTTATGGTTTAAAATAATTTATGAAATTAAAAGGCTATGGAAATGACCAATATACCCTTCAGAAATGAAGAAATTAACCTATGGTACCCTTTTGAAAATGGACAATAAATAAATGAAGGCAATGTTGGTGTGTTTTCTTACTAATTGTCCGGTAGGCATTTGGGAGAGTGGGGGTTCATTCATCTGAGTCAAGAGAGCACGAACGGCTAGAGGAACAGAAATGGCATGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGGATCTTGTTCTGCCAAACCTCTCCTTCAAGTGCTCCCGCTAGTTTCGGCTCTGACAGGACGTTTGTGGAAAAGAATTACAAGGACCTCAAGACTTTGAATCCCAAATTTCCTATATTGATCCGCGAATGCACTGGAGTCGAGCCGCAATTATGGGCTAGATATGATATGGGTGTTGAGAGGGTTGCTCGTTTAGAGGGTTTGAGCGAGGCACAGATCTCCAAGGCACTCGAAGACCTAGTAAAAGTTGGGGCATCCTGAAGGAGTAGTAATCTGCTGTGCTATTGTACTTGCAACAGACGTTAATAAATGCACGAGAGAAACTTCTGTGGAGATGCTTTTCTGTTTACATTCTATTCGCTCTTTTTTTTTTTTTTTTTTTCTTTGAGATTATTGCTCAAATACTCAGCTTGAGC

Coding sequence (CDS)

ATGGCATGGAGAGGACAGCTATCCAAGAATTTGAAGGAGCTTCGGATCTTGTTCTGCCAAACCTCTCCTTCAAGTGCTCCCGCTAGTTTCGGCTCTGACAGGACGTTTGTGGAAAAGAATTACAAGGACCTCAAGACTTTGAATCCCAAATTTCCTATATTGATCCGCGAATGCACTGGAGTCGAGCCGCAATTATGGGCTAGATATGATATGGGTGTTGAGAGGGTTGCTCGTTTAGAGGGTTTGAGCGAGGCACAGATCTCCAAGGCACTCGAAGACCTAGTAAAAGTTGGGGCATCCTGA

Protein sequence

MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTGVEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
Homology
[Close]
BLAST of Carg23326 vs. NCBI nr
Match: KAG7029169.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 204.1 bits (518), Expect = 5.5e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60
           MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG
Sbjct: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60

Query: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 101
           VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 100

[Close]
BLAST of Carg23326 vs. NCBI nr
Match: XP_022932709.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita moschata] >XP_022972179.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita maxima] >XP_023539739.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita pepo subsp. pepo] >KAG6597722.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 188.0 bits (476), Expect = 4.1e-44
Identity = 95/100 (95.00%), Postives = 95/100 (95.00%), Query Frame = 0 

Query: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60
           MAWRGQLSKNLKELRILFCQTSPSSAPA     RTFVEKNYKDLKTLNPKFPILIRECTG
Sbjct: 1   MAWRGQLSKNLKELRILFCQTSPSSAPA-----RTFVEKNYKDLKTLNPKFPILIRECTG 60

Query: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 101
           VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of Carg23326 vs. NCBI nr
Match: XP_022935669.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita moschata] >KAG6581644.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018138.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 180.3 bits (456), Expect = 8.5e-42
Identity = 90/100 (90.00%), Postives = 93/100 (93.00%), Query Frame = 0 

Query: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60
           MAWRGQLSKNLKELRIL CQTSPSSAPA     R FVEKNYK+LKTLNPKFPILIREC+G
Sbjct: 1   MAWRGQLSKNLKELRILLCQTSPSSAPA-----RAFVEKNYKELKTLNPKFPILIRECSG 60

Query: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 101
           VEPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61  VEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of Carg23326 vs. NCBI nr
Match: XP_038906356.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Benincasa hispida])

HSP 1 Score: 179.9 bits (455), Expect = 1.1e-41
Identity = 91/100 (91.00%), Postives = 93/100 (93.00%), Query Frame = 0 

Query: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60
           MAWRGQLSKNLKELRIL CQ+SPSSAPA     R FVEKNYKDLKTLNPKFPILIREC+G
Sbjct: 1   MAWRGQLSKNLKELRILLCQSSPSSAPA-----RGFVEKNYKDLKTLNPKFPILIRECSG 60

Query: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 101
           VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of Carg23326 vs. NCBI nr
Match: XP_008465169.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis melo] >KAA0037682.1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2 [Cucumis melo var. makuwa])

HSP 1 Score: 179.9 bits (455), Expect = 1.1e-41
Identity = 89/100 (89.00%), Postives = 93/100 (93.00%), Query Frame = 0 

Query: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60
           MAWRGQLSKNLKELRIL CQ+SPSSAPA     R FVEKNYKDLKTLNPKFPILIREC+G
Sbjct: 1   MAWRGQLSKNLKELRILLCQSSPSSAPA-----RAFVEKNYKDLKTLNPKFPILIRECSG 60

Query: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 101
           +EPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61  IEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of Carg23326 vs. ExPASy Swiss-Prot
Match: Q9FIJ2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=At5g47890 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 5.5e-36
Identity = 72/100 (72.00%), Postives = 85/100 (85.00%), Query Frame = 0 

Query: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60
           MAWRG +SK++KELRIL CQ+SP+SAP      RTFVEKNYKDLK+LNPK PILIREC+G
Sbjct: 1   MAWRGSISKSMKELRILLCQSSPASAPT-----RTFVEKNYKDLKSLNPKLPILIRECSG 60

Query: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 101
           V+PQ+WARYDMGVER   L+GL+E QI KALE+LVK GA+
Sbjct: 61  VQPQMWARYDMGVERCVNLDGLTEPQILKALENLVKSGAT 95

[Close]
BLAST of Carg23326 vs. ExPASy Swiss-Prot
Match: P0CB79 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo abelii OX=9601 GN=NDUFA2 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 3.7e-16
Identity = 43/90 (47.78%), Postives = 57/90 (63.33%), Query Frame = 0 

Query: 11  LKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTGVEPQLWARYD 70
           L+E+RI  CQ SP S        R F+EK Y +LK  NP  PILIREC+ V+P+LWARY 
Sbjct: 16  LREIRIHLCQRSPGSQGV-----RDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYA 75

Query: 71  MGVERVARLEGLSEAQISKALEDLVKVGAS 101
            G E+   L   S  Q+++ALE+++K  AS
Sbjct: 76  FGQEKNVPLNNFSADQVTRALENVLKPEAS 100

[Close]
BLAST of Carg23326 vs. ExPASy Swiss-Prot
Match: P0CB80 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo pygmaeus OX=9600 GN=NDUFA2 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 3.7e-16
Identity = 43/90 (47.78%), Postives = 57/90 (63.33%), Query Frame = 0 

Query: 11  LKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTGVEPQLWARYD 70
           L+E+RI  CQ SP S        R F+EK Y +LK  NP  PILIREC+ V+P+LWARY 
Sbjct: 16  LREIRIHLCQRSPGSQGV-----RDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYA 75

Query: 71  MGVERVARLEGLSEAQISKALEDLVKVGAS 101
            G E+   L   S  Q+++ALE+++K  AS
Sbjct: 76  FGQEKNVPLNNFSADQVTRALENVLKPEAS 100

[Close]
BLAST of Carg23326 vs. ExPASy Swiss-Prot
Match: Q02370 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Bos taurus OX=9913 GN=NDUFA2 PE=1 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 8.3e-16
Identity = 43/92 (46.74%), Postives = 58/92 (63.04%), Query Frame = 0 

Query: 4  RGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTGVEP 63
          RG+L   L+E+RI  CQ SP S        R F+EK Y +LK  NP  PILIREC+ V+P
Sbjct: 11 RGKL--GLREIRIHLCQRSPGSQGV-----RDFIEKRYVELKKANPDLPILIRECSDVQP 70

Query: 64 QLWARYDMGVERVARLEGLSEAQISKALEDLV 96
          +LWARY  G E+   L   S  Q+++ALE+++
Sbjct: 71 KLWARYAFGQEKNVSLNNFSADQVTRALENVL 95

[Close]
BLAST of Carg23326 vs. ExPASy Swiss-Prot
Match: Q4R5E2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Macaca fascicularis OX=9541 GN=NDUFA2 PE=3 SV=3)

HSP 1 Score: 82.4 bits (202), Expect = 3.2e-15
Identity = 40/85 (47.06%), Postives = 54/85 (63.53%), Query Frame = 0 

Query: 11 LKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTGVEPQLWARYD 70
          L+E+RI  CQ SP S        R F+EK Y +LK  NP  PILIREC+ V+P+LWARY 
Sbjct: 16 LREIRIHLCQRSPGSQGV-----RDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYA 75

Query: 71 MGVERVARLEGLSEAQISKALEDLV 96
           G E+   L   S  Q+++ALE+++
Sbjct: 76 FGQEKNVPLNNFSADQVTRALENVL 95

[Close]
BLAST of Carg23326 vs. ExPASy TrEMBL
Match: A0A6J1IAR8 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita maxima OX=3661 GN=LOC111470791 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.0e-44
Identity = 95/100 (95.00%), Postives = 95/100 (95.00%), Query Frame = 0 

Query: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60
           MAWRGQLSKNLKELRILFCQTSPSSAPA     RTFVEKNYKDLKTLNPKFPILIRECTG
Sbjct: 1   MAWRGQLSKNLKELRILFCQTSPSSAPA-----RTFVEKNYKDLKTLNPKFPILIRECTG 60

Query: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 101
           VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of Carg23326 vs. ExPASy TrEMBL
Match: A0A6J1EXS5 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita moschata OX=3662 GN=LOC111439176 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.0e-44
Identity = 95/100 (95.00%), Postives = 95/100 (95.00%), Query Frame = 0 

Query: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60
           MAWRGQLSKNLKELRILFCQTSPSSAPA     RTFVEKNYKDLKTLNPKFPILIRECTG
Sbjct: 1   MAWRGQLSKNLKELRILFCQTSPSSAPA-----RTFVEKNYKDLKTLNPKFPILIRECTG 60

Query: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 101
           VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of Carg23326 vs. ExPASy TrEMBL
Match: A0A6J1F628 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita moschata OX=3662 GN=LOC111442457 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.1e-42
Identity = 90/100 (90.00%), Postives = 93/100 (93.00%), Query Frame = 0 

Query: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60
           MAWRGQLSKNLKELRIL CQTSPSSAPA     R FVEKNYK+LKTLNPKFPILIREC+G
Sbjct: 1   MAWRGQLSKNLKELRILLCQTSPSSAPA-----RAFVEKNYKELKTLNPKFPILIRECSG 60

Query: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 101
           VEPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61  VEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of Carg23326 vs. ExPASy TrEMBL
Match: A0A5A7T2I6 (NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1593G00030 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.4e-42
Identity = 89/100 (89.00%), Postives = 93/100 (93.00%), Query Frame = 0 

Query: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60
           MAWRGQLSKNLKELRIL CQ+SPSSAPA     R FVEKNYKDLKTLNPKFPILIREC+G
Sbjct: 1   MAWRGQLSKNLKELRILLCQSSPSSAPA-----RAFVEKNYKDLKTLNPKFPILIRECSG 60

Query: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 101
           +EPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61  IEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of Carg23326 vs. ExPASy TrEMBL
Match: A0A1S3CN67 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Cucumis melo OX=3656 GN=LOC103502835 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.4e-42
Identity = 89/100 (89.00%), Postives = 93/100 (93.00%), Query Frame = 0 

Query: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60
           MAWRGQLSKNLKELRIL CQ+SPSSAPA     R FVEKNYKDLKTLNPKFPILIREC+G
Sbjct: 1   MAWRGQLSKNLKELRILLCQSSPSSAPA-----RAFVEKNYKDLKTLNPKFPILIRECSG 60

Query: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 101
           +EPQLWARYDMG+ERVARLEGLSEAQISKALEDLVKVGAS
Sbjct: 61  IEPQLWARYDMGIERVARLEGLSEAQISKALEDLVKVGAS 95

[Close]
BLAST of Carg23326 vs. TAIR 10
Match: AT5G47890.1 (NADH-ubiquinone oxidoreductase B8 subunit, putative )

HSP 1 Score: 151.4 bits (381), Expect = 3.9e-37
Identity = 72/100 (72.00%), Postives = 85/100 (85.00%), Query Frame = 0 

Query: 1   MAWRGQLSKNLKELRILFCQTSPSSAPASFGSDRTFVEKNYKDLKTLNPKFPILIRECTG 60
           MAWRG +SK++KELRIL CQ+SP+SAP      RTFVEKNYKDLK+LNPK PILIREC+G
Sbjct: 1   MAWRGSISKSMKELRILLCQSSPASAPT-----RTFVEKNYKDLKSLNPKLPILIRECSG 60

Query: 61  VEPQLWARYDMGVERVARLEGLSEAQISKALEDLVKVGAS 101
           V+PQ+WARYDMGVER   L+GL+E QI KALE+LVK GA+
Sbjct: 61  VQPQMWARYDMGVERCVNLDGLTEPQILKALENLVKSGAT 95

The following BLAST results are available for this feature:
BLAST of Carg23326 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7029169.15.5e-49100.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucurbita argyrosp... [more]
XP_022932709.14.1e-4495.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita mos... [more]
XP_022935669.18.5e-4290.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like [Cucurbita mos... [more]
XP_038906356.11.1e-4191.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Benincasa hispida][more]
XP_008465169.11.1e-4189.00PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 [Cucumis... [more]
BLAST of Carg23326 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FIJ25.5e-3672.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Arabidopsis thal... [more]
P0CB793.7e-1647.78NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo abelii OX=... [more]
P0CB803.7e-1647.78NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Pongo pygmaeus O... [more]
Q023708.3e-1646.74NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Bos taurus OX=99... [more]
Q4R5E23.2e-1547.06NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Macaca fascicula... [more]
BLAST of Carg23326 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IAR82.0e-4495.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita m... [more]
A0A6J1EXS52.0e-4495.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita m... [more]
A0A6J1F6284.1e-4290.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like OS=Cucurbita m... [more]
A0A5A7T2I65.4e-4289.00NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 2 OS=Cucumis melo var... [more]
A0A1S3CN675.4e-4289.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 OS=Cucumis melo OX=... [more]
BLAST of Carg23326 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G47890.13.9e-3772.00NADH-ubiquinone oxidoreductase B8 subunit, putative [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007741Ribosomal protein/NADH dehydrogenase domainSMARTSM00916L51_S25_CI_B8_2coord: 20..98
e-value: 1.5E-20
score: 84.2
IPR007741Ribosomal protein/NADH dehydrogenase domainPFAMPF05047L51_S25_CI-B8coord: 34..83
e-value: 4.1E-13
score: 49.0
IPR016464NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2PIRSFPIRSF005822NDUA2coord: 1..100
e-value: 2.0E-36
score: 122.4
IPR016464NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2PANTHERPTHR12878NADH-UBIQUINONE OXIDOREDUCTASE B8 SUBUNITcoord: 1..99
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 2..98
e-value: 2.2E-28
score: 100.4
NoneNo IPR availablePANTHERPTHR12878:SF5BNAANNG07980D PROTEINcoord: 1..99
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 10..96

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg23326-RACarg23326-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005747 mitochondrial respiratory chain complex I