Carg23309 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23309
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Elongation factor G
Location	Carg_Chr09: 6718927 .. 6721341 (-)
RNA-Seq Expression	Carg23309
Synteny	Carg23309

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAAGATCGTAGTTACATGTGGGTTAAGAAAGATAACACCTGATGCATTCAAGGTGGATTGCAACATTCTAGTTCCTTTCGTGAAACAGGTTTTGGTTTGGCTTGGAAAATGTATGAAGGAGTTGTATTTCTAACTTAAATATGTCCTCGTCAACAAGTCTGGGGTTAAGATCCTTTCTCTGGGTATCCTCGTATTTTTTAAATAAGAAACCAAACTTTTGTAGAAATATGAAGAATAAGAGCATTGCAAAAATGGCTCACACAAAAGGAGCCCAAGCCAACAAAAAGGCTACAATAAAAGGCTATGATATCATTGGAAGATCATTTTGGTGGAAGTTAGATAAAAGGCTATGATATTCATTTATTGAATTCTTTTATATTGGACAAAATTATGCCCCTTTAATGCATCTTTAATGTTTTACACTTAGCTTCCTTGTATATAGACAAAGTTTTGAATCTGCTTGGTTTGATTTGAACTTTTCGAAAAAGCTTATGCAATAACAACTAGCTTCACTAAATGAGCTTGTTCATTGTCCACTTGGTCCCTTTGGTGTCCATGGCATTGTGCCCTCAATTCTTTTTTAGCTTCCTGGGCTTCATTTACTGTCCACTCTTGTTTGTGTTTTGGTTTACATCACCTATTGGTTTTATGGTTATTGTAAAGCTCTTTGAAGTATGGCGTTAAGTAGCTATGTGTGGGGAACAAGTTTTTTCCTACTTTTTGATTGGACAATGCGCTTTTCTAGATTGAAGAAAAGGCTGGTTCTTGCTTTTTCTCCATTTCTTTCCATTTCTGTCCGTTATATGCAACTTCTTCGGTGGGAAGAAGTTTTAATTGACCTTATGCAGTGTCCTTTGCGAGATTACTTTTTAGACAAGCTAATAAAGAACTTGGGATTTATGAATTAGTGAAGAAGTGTTATTTGGTTGGTGTTTTTAATGTATTACCAGTAGTTCTTTGGGTGAGAGAAATTCTCATTGGTTCTAATTTGTACAAATAAGCGAGGATGGATTATATGTGATTGTGATGCTTTGAATGTCCAGTTGAAGGGATTTATCATAAAATTATTATGGATTAGATTTTTACATTGATGTGGCAAAAGAGAGGAAAGAAAGGTGTTTCCTTCTGGTACAAAAGTGATATGTATATATTTTAAAATGGATATTTTAATAAATGTGTCCCATCCGTGTTCGTGTCCTAGATTTTTAATAATGATGTGTCTTCATGTCCATGTCGTGTCGTATCCATATCATGTATTTGTATCCGTGCTTCTTAGATTAGCAATTTACTGTCCTTATGAGCTTTAGAAGCCATTGATTCACCATTTTAAGAGGGAAAGATCTCTTAACTCAAGGTTTGTGTGTAAGTAGCTGGATATGGTTCTCATGTGAGATTTTAGAATGATACATGGTATCAGGTATGACAAGATACCTAGTAGAAGTTTCAGTCTTGTGGTTGCCTAAAATCCCCTTTAGTATGGAGGGACACGGAGATCGGTAATAAAAAATGTGGAATTAAGCAGTGATTAACTCGGAAACAACAGTTATAATCTTTACCTGCTAAAGTTTCTGTAACGACCCAAGCCCACCGCTAGCAGATATTGTCCTCTTTCGGCTTTCCCTTTCGGGCTTTCCATTTCGGGCTTTCCCTCAAGGTTTTTAAAACACATCGGCTAGGGAGAGGTTTTCACGCCCTTATAAAGAATACTTTGTTCTCCTTCCTGACCGATGTGGCATCTCACCATTTCGGTCAGGGTAACCTGATCCTTGAACACCCAATGAGGAAATGATTGACACATTCTTTTCTCTTCAGTAAGAAATTGTTGAATAAGATGTTAAAGTTGCATTTTTAAATTAGAGTTCAATGCATAGAGGAGAATAAAAAAGTATTAACAACTGTAACTTGCGTTCGTGCTAGGGTTTAACGAGTTTAGCGTAGGTTTCGCTTGATTTCTTTTTAGCTGTATGAGTTTTCTGAATTTCGTACTCTGCAGAACGAGTTGGATTATTGTGGGGAGGAACCGTCAATGTCCCCTAGAGCAGCAGCAGTTCACCAACATCAACATGCTCAACCAACAATGCAGTTCACAAACTCGAGCTTTCCAGCTTCAGGTCTTTCTGCACAAGCAACCACAGGACAAGGAAGTCGAACCGAGCACTCTGATAACCATTCCAAAAGTTCAGTCTTCTCAAATGCTCTATCAAGCCCCATTCGCCGGAGTTTGCAGCAGTATCACATCGCTCAGGAAGCTCACTACCCAAACAGTGGGACGTCGGGAGGAAACGGAGCCACTCGAAACAATGAACCCAACTTCCTTCAGCATCAGAATGCTGACCCTAATTCTGTCAGCTCTAACGACTCATCGATGGACATGCATGCCGATAGTCCCGCACATGATTCACATTACTGA

mRNA sequence

ATGAACAAGATCGTAGTTACATGTGGGTTAAGAAAGATAACACCTGATGCATTCAAGGTGGATTGCAACATTCTAGTTCCTTTCGTGAAACAGAACGAGTTGGATTATTGTGGGGAGGAACCGTCAATGTCCCCTAGAGCAGCAGCAGTTCACCAACATCAACATGCTCAACCAACAATGCAGTTCACAAACTCGAGCTTTCCAGCTTCAGGTCTTTCTGCACAAGCAACCACAGGACAAGGAAGTCGAACCGAGCACTCTGATAACCATTCCAAAAGTTCAGTCTTCTCAAATGCTCTATCAAGCCCCATTCGCCGGAGTTTGCAGCAGTATCACATCGCTCAGGAAGCTCACTACCCAAACAGTGGGACGTCGGGAGGAAACGGAGCCACTCGAAACAATGAACCCAACTTCCTTCAGCATCAGAATGCTGACCCTAATTCTGTCAGCTCTAACGACTCATCGATGGACATGCATGCCGATAGTCCCGCACATGATTCACATTACTGA

Coding sequence (CDS)

ATGAACAAGATCGTAGTTACATGTGGGTTAAGAAAGATAACACCTGATGCATTCAAGGTGGATTGCAACATTCTAGTTCCTTTCGTGAAACAGAACGAGTTGGATTATTGTGGGGAGGAACCGTCAATGTCCCCTAGAGCAGCAGCAGTTCACCAACATCAACATGCTCAACCAACAATGCAGTTCACAAACTCGAGCTTTCCAGCTTCAGGTCTTTCTGCACAAGCAACCACAGGACAAGGAAGTCGAACCGAGCACTCTGATAACCATTCCAAAAGTTCAGTCTTCTCAAATGCTCTATCAAGCCCCATTCGCCGGAGTTTGCAGCAGTATCACATCGCTCAGGAAGCTCACTACCCAAACAGTGGGACGTCGGGAGGAAACGGAGCCACTCGAAACAATGAACCCAACTTCCTTCAGCATCAGAATGCTGACCCTAATTCTGTCAGCTCTAACGACTCATCGATGGACATGCATGCCGATAGTCCCGCACATGATTCACATTACTGA

Protein sequence

MNKIVVTCGLRKITPDAFKVDCNILVPFVKQNELDYCGEEPSMSPRAAAVHQHQHAQPTMQFTNSSFPASGLSAQATTGQGSRTEHSDNHSKSSVFSNALSSPIRRSLQQYHIAQEAHYPNSGTSGGNGATRNNEPNFLQHQNADPNSVSSNDSSMDMHADSPAHDSHY

Homology

[Close]

BLAST of Carg23309 vs. NCBI nr
Match: KAG7025059.1 (hypothetical protein SDJN02_13882, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 335.9 bits (860), Expect = 2.0e-88
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MNKIVVTCGLRKITPDAFKVDCNILVPFVKQNELDYCGEEPSMSPRAAAVHQHQHAQPTM 60
           MNKIVVTCGLRKITPDAFKVDCNILVPFVKQNELDYCGEEPSMSPRAAAVHQHQHAQPTM
Sbjct: 1   MNKIVVTCGLRKITPDAFKVDCNILVPFVKQNELDYCGEEPSMSPRAAAVHQHQHAQPTM 60

Query: 61  QFTNSSFPASGLSAQATTGQGSRTEHSDNHSKSSVFSNALSSPIRRSLQQYHIAQEAHYP 120
           QFTNSSFPASGLSAQATTGQGSRTEHSDNHSKSSVFSNALSSPIRRSLQQYHIAQEAHYP
Sbjct: 61  QFTNSSFPASGLSAQATTGQGSRTEHSDNHSKSSVFSNALSSPIRRSLQQYHIAQEAHYP 120

Query: 121 NSGTSGGNGATRNNEPNFLQHQNADPNSVSSNDSSMDMHADSPAHDSHY 170
           NSGTSGGNGATRNNEPNFLQHQNADPNSVSSNDSSMDMHADSPAHDSHY
Sbjct: 121 NSGTSGGNGATRNNEPNFLQHQNADPNSVSSNDSSMDMHADSPAHDSHY 169

[Close]

BLAST of Carg23309 vs. NCBI nr
Match: XP_023536218.1 (uncharacterized protein LOC111797455 [Cucurbita pepo subsp. pepo] >KAG6592202.1 hypothetical protein SDJN03_14548, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 272.7 bits (696), Expect = 2.1e-69
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 31  QNELDYCGEEPSMSPRAAAVHQHQHAQPTMQFTNSSFPASGLSAQATTGQGSRTEHSDNH 90
           +NELDYCGEEPSMSPRAAAVHQHQHAQPTMQFTNSSFPASGLSAQATTGQGSRTEHSDNH
Sbjct: 80  RNELDYCGEEPSMSPRAAAVHQHQHAQPTMQFTNSSFPASGLSAQATTGQGSRTEHSDNH 139

Query: 91  SKSSVFSNALSSPIRRSLQQYHIAQEAHYPNSGTSGGNGATRNNEPNFLQHQNADPNSVS 150
           SKSSVFSNALSSPIRRSLQQYHIAQEAHYPNSGTSGGNGATRNNEPNFLQHQNADPNSVS
Sbjct: 140 SKSSVFSNALSSPIRRSLQQYHIAQEAHYPNSGTSGGNGATRNNEPNFLQHQNADPNSVS 199

Query: 151 SNDSSMDMHADSPAHDSHY 170
           SNDSSMDMHADSPAHDSHY
Sbjct: 200 SNDSSMDMHADSPAHDSHY 218

[Close]

BLAST of Carg23309 vs. NCBI nr
Match: XP_022976061.1 (uncharacterized protein LOC111476576 [Cucurbita maxima])

HSP 1 Score: 268.1 bits (684), Expect = 5.2e-68
Identity = 135/139 (97.12%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 31  QNELDYCGEEPSMSPRAAAVHQHQHAQPTMQFTNSSFPASGLSAQATTGQGSRTEHSDNH 90
           +NELDYCGEEPSMSPRAAAVHQHQHAQPTMQFTNSSFP SGLSAQATTGQGSRTEHSDNH
Sbjct: 80  RNELDYCGEEPSMSPRAAAVHQHQHAQPTMQFTNSSFPGSGLSAQATTGQGSRTEHSDNH 139

Query: 91  SKSSVFSNALSSPIRRSLQQYHIAQEAHYPNSGTSGGNGATRNNEPNFLQHQNADPNSVS 150
           SKSSVFSNALSSPIR+SLQQYHIA+EAHYPNSGTSGGNGATRNNEPNFLQHQNADPNSVS
Sbjct: 140 SKSSVFSNALSSPIRQSLQQYHIAREAHYPNSGTSGGNGATRNNEPNFLQHQNADPNSVS 199

Query: 151 SNDSSMDMHADSPAHDSHY 170
           SNDSSMDMHADSPAHDSHY
Sbjct: 200 SNDSSMDMHADSPAHDSHY 218

[Close]

BLAST of Carg23309 vs. NCBI nr
Match: XP_022937000.1 (uncharacterized protein LOC111443422 [Cucurbita moschata])

HSP 1 Score: 267.7 bits (683), Expect = 6.8e-68
Identity = 136/139 (97.84%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 31  QNELDYCGEEPSMSPRAAAVHQHQHAQPTMQFTNSSFPASGLSAQATTGQGSRTEHSDNH 90
           +NELDYCGEEPSMSPRAAAVHQHQHAQPTMQFTNSSFPASGLSAQATTGQGSRTEHSDNH
Sbjct: 80  RNELDYCGEEPSMSPRAAAVHQHQHAQPTMQFTNSSFPASGLSAQATTGQGSRTEHSDNH 139

Query: 91  SKSSVFSNALSSPIRRSLQQYHIAQEAHYPNSGTSGGNGATRNNEPNFLQHQNADPNSVS 150
           SKSSVFSNALSSPIRRSLQQYHIAQ AHYPNSGT GGNGATRNNEPNFLQHQNADPNSVS
Sbjct: 140 SKSSVFSNALSSPIRRSLQQYHIAQGAHYPNSGTLGGNGATRNNEPNFLQHQNADPNSVS 199

Query: 151 SNDSSMDMHADSPAHDSHY 170
           SNDSSMDMHADSPAHDSHY
Sbjct: 200 SNDSSMDMHADSPAHDSHY 218

[Close]

BLAST of Carg23309 vs. NCBI nr
Match: XP_004139686.1 (uncharacterized protein LOC101216474 [Cucumis sativus] >KAE8646181.1 hypothetical protein Csa_016152 [Cucumis sativus])

HSP 1 Score: 257.3 bits (656), Expect = 9.2e-65
Identity = 131/139 (94.24%), Postives = 134/139 (96.40%), Query Frame = 0


Query: 31  QNELDYCGEEPSMSPRAAAVHQHQHAQPTMQFTNSSFPASGLSAQATTGQGSRTEHSDNH 90
           +NELDYCGEEPSMSPR  AVHQHQHAQPTMQFTNSSFPASGLS QATTGQGSRTEHS+NH
Sbjct: 80  RNELDYCGEEPSMSPR-PAVHQHQHAQPTMQFTNSSFPASGLSGQATTGQGSRTEHSENH 139

Query: 91  SKSSVFSNALSSPIRRSLQQYHIAQEAHYPNSGTSGGNGATRNNEPNFLQHQNADPNSVS 150
           SKSSVFSNALSSP+RRSLQQYHIAQEAHYPNSG SGGNGATRNNEPNFLQHQN DPNSVS
Sbjct: 140 SKSSVFSNALSSPVRRSLQQYHIAQEAHYPNSGMSGGNGATRNNEPNFLQHQNTDPNSVS 199

Query: 151 SNDSSMDMHADSPAHDSHY 170
           SNDSSMDMHADSPAHDSHY
Sbjct: 200 SNDSSMDMHADSPAHDSHY 217

[Close]

BLAST of Carg23309 vs. ExPASy TrEMBL
Match: A0A6J1IFV8 (uncharacterized protein LOC111476576 OS=Cucurbita maxima OX=3661 GN=LOC111476576 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.5e-68
Identity = 135/139 (97.12%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 31  QNELDYCGEEPSMSPRAAAVHQHQHAQPTMQFTNSSFPASGLSAQATTGQGSRTEHSDNH 90
           +NELDYCGEEPSMSPRAAAVHQHQHAQPTMQFTNSSFP SGLSAQATTGQGSRTEHSDNH
Sbjct: 80  RNELDYCGEEPSMSPRAAAVHQHQHAQPTMQFTNSSFPGSGLSAQATTGQGSRTEHSDNH 139

Query: 91  SKSSVFSNALSSPIRRSLQQYHIAQEAHYPNSGTSGGNGATRNNEPNFLQHQNADPNSVS 150
           SKSSVFSNALSSPIR+SLQQYHIA+EAHYPNSGTSGGNGATRNNEPNFLQHQNADPNSVS
Sbjct: 140 SKSSVFSNALSSPIRQSLQQYHIAREAHYPNSGTSGGNGATRNNEPNFLQHQNADPNSVS 199

Query: 151 SNDSSMDMHADSPAHDSHY 170
           SNDSSMDMHADSPAHDSHY
Sbjct: 200 SNDSSMDMHADSPAHDSHY 218

[Close]

BLAST of Carg23309 vs. ExPASy TrEMBL
Match: A0A6J1FFB0 (uncharacterized protein LOC111443422 OS=Cucurbita moschata OX=3662 GN=LOC111443422 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.3e-68
Identity = 136/139 (97.84%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 31  QNELDYCGEEPSMSPRAAAVHQHQHAQPTMQFTNSSFPASGLSAQATTGQGSRTEHSDNH 90
           +NELDYCGEEPSMSPRAAAVHQHQHAQPTMQFTNSSFPASGLSAQATTGQGSRTEHSDNH
Sbjct: 80  RNELDYCGEEPSMSPRAAAVHQHQHAQPTMQFTNSSFPASGLSAQATTGQGSRTEHSDNH 139

Query: 91  SKSSVFSNALSSPIRRSLQQYHIAQEAHYPNSGTSGGNGATRNNEPNFLQHQNADPNSVS 150
           SKSSVFSNALSSPIRRSLQQYHIAQ AHYPNSGT GGNGATRNNEPNFLQHQNADPNSVS
Sbjct: 140 SKSSVFSNALSSPIRRSLQQYHIAQGAHYPNSGTLGGNGATRNNEPNFLQHQNADPNSVS 199

Query: 151 SNDSSMDMHADSPAHDSHY 170
           SNDSSMDMHADSPAHDSHY
Sbjct: 200 SNDSSMDMHADSPAHDSHY 218

[Close]

BLAST of Carg23309 vs. ExPASy TrEMBL
Match: A0A0A0K448 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G298810 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.5e-65
Identity = 132/139 (94.96%), Postives = 134/139 (96.40%), Query Frame = 0


Query: 31  QNELDYCGEEPSMSPRAAAVHQHQHAQPTMQFTNSSFPASGLSAQATTGQGSRTEHSDNH 90
           QNELDYCGEEPSMSPR  AVHQHQHAQPTMQFTNSSFPASGLS QATTGQGSRTEHS+NH
Sbjct: 11  QNELDYCGEEPSMSPR-PAVHQHQHAQPTMQFTNSSFPASGLSGQATTGQGSRTEHSENH 70

Query: 91  SKSSVFSNALSSPIRRSLQQYHIAQEAHYPNSGTSGGNGATRNNEPNFLQHQNADPNSVS 150
           SKSSVFSNALSSP+RRSLQQYHIAQEAHYPNSG SGGNGATRNNEPNFLQHQN DPNSVS
Sbjct: 71  SKSSVFSNALSSPVRRSLQQYHIAQEAHYPNSGMSGGNGATRNNEPNFLQHQNTDPNSVS 130

Query: 151 SNDSSMDMHADSPAHDSHY 170
           SNDSSMDMHADSPAHDSHY
Sbjct: 131 SNDSSMDMHADSPAHDSHY 148

[Close]

BLAST of Carg23309 vs. ExPASy TrEMBL
Match: A0A5A7V1A5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1449G00010 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 4.2e-63
Identity = 128/139 (92.09%), Postives = 132/139 (94.96%), Query Frame = 0


Query: 31  QNELDYCGEEPSMSPRAAAVHQHQHAQPTMQFTNSSFPASGLSAQATTGQGSRTEHSDNH 90
           +NELDYCGEEPSMSPR  AVHQH HAQPTMQFTNSSFPASGLS QATTGQGSRTEHS+NH
Sbjct: 80  RNELDYCGEEPSMSPR-PAVHQHHHAQPTMQFTNSSFPASGLSGQATTGQGSRTEHSENH 139

Query: 91  SKSSVFSNALSSPIRRSLQQYHIAQEAHYPNSGTSGGNGATRNNEPNFLQHQNADPNSVS 150
           SKSSVFSNALSSP+RRSLQQYHIAQEAHYPNSG SGGNGATRNNE NFLQHQN +PNSVS
Sbjct: 140 SKSSVFSNALSSPVRRSLQQYHIAQEAHYPNSGMSGGNGATRNNESNFLQHQNTEPNSVS 199

Query: 151 SNDSSMDMHADSPAHDSHY 170
           SNDSSMDMHADSPAHDSHY
Sbjct: 200 SNDSSMDMHADSPAHDSHY 217

[Close]

BLAST of Carg23309 vs. ExPASy TrEMBL
Match: A0A1S3CFN6 (uncharacterized protein LOC103500405 OS=Cucumis melo OX=3656 GN=LOC103500405 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 4.2e-63
Identity = 128/139 (92.09%), Postives = 132/139 (94.96%), Query Frame = 0


Query: 31  QNELDYCGEEPSMSPRAAAVHQHQHAQPTMQFTNSSFPASGLSAQATTGQGSRTEHSDNH 90
           +NELDYCGEEPSMSPR  AVHQH HAQPTMQFTNSSFPASGLS QATTGQGSRTEHS+NH
Sbjct: 80  RNELDYCGEEPSMSPR-PAVHQHHHAQPTMQFTNSSFPASGLSGQATTGQGSRTEHSENH 139

Query: 91  SKSSVFSNALSSPIRRSLQQYHIAQEAHYPNSGTSGGNGATRNNEPNFLQHQNADPNSVS 150
           SKSSVFSNALSSP+RRSLQQYHIAQEAHYPNSG SGGNGATRNNE NFLQHQN +PNSVS
Sbjct: 140 SKSSVFSNALSSPVRRSLQQYHIAQEAHYPNSGMSGGNGATRNNESNFLQHQNTEPNSVS 199

Query: 151 SNDSSMDMHADSPAHDSHY 170
           SNDSSMDMHADSPAHDSHY
Sbjct: 200 SNDSSMDMHADSPAHDSHY 217

[Close]

BLAST of Carg23309 vs. TAIR 10
Match: AT4G09830.1 (Uncharacterised conserved protein UCP009193 )

HSP 1 Score: 77.4 bits (189), Expect = 1.2e-14
Identity = 60/131 (45.80%), Postives = 74/131 (56.49%), Query Frame = 0


Query: 31  QNELDYCGEEPSMSPRAAAVHQHQHAQPTMQFTNSSFPASGLSAQATTGQGSRTEHSDNH 90
           QNEL+ C +EP +SPRA         QPTM  TN     +  ++  T     R+E  +N 
Sbjct: 80  QNELECCIDEPPISPRAPP------PQPTMHVTNPGLMTTSGTSFPTAVPVVRSEQCENQ 139

Query: 91  SKSSVFSNALSSPIRRSLQQYHIAQEAHYPNSGTSGGNGATRNNEPNFLQHQNADPNSVS 150
           +K+SVFSNALSSPIRRSLQ Y I Q  +     TSG  G TR++E       N   NS  
Sbjct: 140 AKNSVFSNALSSPIRRSLQNYQIPQGGY-----TSG--GTTRSSE------VNRGSNSPG 191

Query: 151 SNDSSMDMHAD 162
           S DSSMDMHA+
Sbjct: 200 SIDSSMDMHAE 191

The following BLAST results are available for this feature:

BLAST of Carg23309 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025059.1	2.0e-88	100.00	hypothetical protein SDJN02_13882, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023536218.1	2.1e-69	99.28	uncharacterized protein LOC111797455 [Cucurbita pepo subsp. pepo] >KAG6592202.1 ...	[more]
XP_022976061.1	5.2e-68	97.12	uncharacterized protein LOC111476576 [Cucurbita maxima]	[more]
XP_022937000.1	6.8e-68	97.84	uncharacterized protein LOC111443422 [Cucurbita moschata]	[more]
XP_004139686.1	9.2e-65	94.24	uncharacterized protein LOC101216474 [Cucumis sativus] >KAE8646181.1 hypothetica...	[more]

BLAST of Carg23309 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg23309 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IFV8	2.5e-68	97.12	uncharacterized protein LOC111476576 OS=Cucurbita maxima OX=3661 GN=LOC111476576...	[more]
A0A6J1FFB0	3.3e-68	97.84	uncharacterized protein LOC111443422 OS=Cucurbita moschata OX=3662 GN=LOC1114434...	[more]
A0A0A0K448	1.5e-65	94.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G298810 PE=4 SV=1	[more]
A0A5A7V1A5	4.2e-63	92.09	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CFN6	4.2e-63	92.09	uncharacterized protein LOC103500405 OS=Cucumis melo OX=3656 GN=LOC103500405 PE=...	[more]

BLAST of Carg23309 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G09830.1	1.2e-14	45.80	Uncharacterised conserved protein UCP009193	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..84
None	No IPR available	PANTHER	PTHR33675	NUCLEAR RECEPTOR FAMILY 2 GROUP C PROTEIN	coord: 26..168
None	No IPR available	PANTHER	PTHR33675:SF3	HOLOCARBOXYLASE SYNTHETASE	coord: 26..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23309-RA	Carg23309-RA	mRNA